Rw6G013120

udp-glucuronic acid decarboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000040
Physical Location & Seq
Forward (+)
24159624 .. 24163914
4291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G013120.1

Sequence Viewer

Length: 1776 bp
ATGTCCTTCTGTGCAATGTACTTAGAAGACATATTGACACGAAGAAATAGACCTAGCCGTAATGAGGATGGAGTCGGTCGGAATGTAGAAGGTGGACTGTCCATATTTCAAGGTGGTGGACGTGCACTTGGAGCTGCGGAAGAGTATCAACTCAATCATGATGACTGGGAGAGTGCTAGGTCTTGTGTTTTGGCTAATTGTCCAGAGGCTAAGCCTTATGAAAGAAGGCATGTAAGGGAAGCTCAGGCCAATCGAGGCCGTCGTGTCACCTTGCTGCAATCTGAAAAAAGAGCTAAGAAGTCATTTCCCAATTGGTTTGACAAACTTGTTAATGGAATGCACAACGAGGGTGATCCATGGGTGACTGAAGATTTGTTGGCTTTGGCTAATGGCCCCAGCAAATGGAGTGTGGGAAAACCACAACTCAAACTAGAGCCAAAGTTGCTAACCCGGGAAAAGGAGAAGAACAGAGAGCTCAACCACATTTACAAATACAAAGCAAATAGGCTTCCTCTAGGGTGGGATAGAAGGTTTGAAGGTGTAGACATGGAGACGCAACAACCGCTAGATCCTTTGTACCATTACAACATGGAGGTGAATTTTGCTATGAATGATACAGCGGAGGAGACTGAAAATCTAAATTGTGTTGAAAGATCGAGTGCAGCAAAGATGCGTCGATTTCAGACTAATAGAAGCTCTAATAGGCCTAGATGGGCCTCAAACGGGACTGTGGAAAAACTGAAGTTTAATGCCAAAGGACAACCAGTTGCACCACCTCACACTGTTGCCAGAAATTTCTACAAGGCCTCAAACATGGATGCTGCTTGGGAGAGGATTAAGGGAACGATTGATTGGAGCAATGTAGATGTGGCAATGCAGCCATTTGTTCGCCGAGTCTGCGAACTCAAATTGAATGATAGGTGGAAGAGTTATAAGTCACGACTCCAGAGGTTATACTACAAGCCAAACATCGGTACTCCAAGGAGGTTTGCCTGCAGCCACCCTAGTGTGAACCAAGCCCAATGGAGGTCACTCGTGGCTGAGTGGGATAAAAATCCTAATCAGGAACGTGCTTTGACATATGCCAACAATAGGAAGGAGCTGAGGTCGAGTCACACTAATGGAACAAAGACTTTTGCACAGATGCGATATGAATACGAACAAGTGAATGGTTATGCTCCTGATCGCATAACATTTTTCACAATGACACATACTCGTGAAGACGGAACAGTAGTAGATGCCGAGTCAGCAGATATAATAGCCAAGTTCAAAAATGGATTAAAGGAGTATGAAGATAGGCAGGAGATATTGACAGATGAGATCCGGCACAAAGTGTACAGTGATGTACTTGGTCCAGAGAAAAGGAATCGCGTTAGAGGAGTTGTCACTGAGGCAAGAGGTATGTGTAAGGAAGTGCATACTCTAAGAGCTGCGTGGGAGCAACAAAAGCAAGCAACAGAAGAAGCTCATGTTGAAATAAAGAGTTTAAGGTTGGCTAATATCAACTTGGCTGAAGAGTTGAGACACGAGCAAGCCGTAACAATGGAGACACACAAGAAAAAGATGGAAGATTCATTTGCAAAAATGAAGGAAAACATGATGAATGAGGTAAACAAGTTGTTTCATAACTCATCAAGTACTGATGGTGAAAAAGGTGTAATGGAGAATCAAATGGCATCAAAGGACAGAATAGATGAAGAGGATTGTGTAATGGCTGATCAGGAGAATGTTGAGGTCTATTCTCCAATTATGCCATTTGATCTGAACAGTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko00520 ko01100 ko01110 map00053 map00520 map01100 map01110
Pfam Domains
Protein Families
Epimerase GDP_Man_Dehyd Nucleotid_trans

Protein Analysis

591

Amino Acids

68.53

Weight (kDa)

8.65

Isoelectric Point (pI)

50.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 338 - 462 3.5e-24 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000040)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00150 FvH4_2g13531 FvH4_2g21543 FvH4_3g32800 FvH4_3g32802 FvH4_4g00091 FvH4_4g00092 FvH4_5g22070 FvH4_5g31391 FvH4_6g11351 FvH4_6g23430 FvH4_6g23672 FvH4_6g52753
malus_domestica MD03G1101500.v1.1 MD08G1234800.v1.1
pyrus_communis pycom07g24860 pycom09g07860 pycom10g09330 pycom10g15360 pycom11g01600 pycom11g13460 pycom13g15580
rosa_chinensis RchiOBHm_Chr1g0332021 RchiOBHm_Chr2g0095801 RchiOBHm_Chr2g0111771 RchiOBHm_Chr2g0127541 RchiOBHm_Chr2g0136581 RchiOBHm_Chr2g0136591 RchiOBHm_Chr2g0143311 RchiOBHm_Chr2g0145131 RchiOBHm_Chr2g0151391 RchiOBHm_Chr3g0468771 RchiOBHm_Chr3g0473281 RchiOBHm_Chr3g0481961 RchiOBHm_Chr4g0393741 RchiOBHm_Chr4g0397391 RchiOBHm_Chr4g0435991 RchiOBHm_Chr5g0015951 RchiOBHm_Chr5g0016651 RchiOBHm_Chr5g0039191 RchiOBHm_Chr5g0039211 RchiOBHm_Chr6g0254441 RchiOBHm_Chr6g0260911 RchiOBHm_Chr6g0274501 RchiOBHm_Chr6g0274511 RchiOBHm_Chr7g0184951 RchiOBHm_Chr7g0201701 RchiOBHm_Chr7g0201721 RchiOBHm_Chr7g0201731 RchiOBHm_Chr7g0234921 RchiOBHm_Chr7g0237841
rosa_laevigata RLG00000001204 RLG00000001230 RLG00000001341 RLG00000001513 RLG00000001971 RLG00000002177 RLG00000002360 RLG00000003112 RLG00000003130 RLG00000003854 RLG00000008209 RLG00000008322 RLG00000008412 RLG00000008524 RLG00000009491 RLG00000009908 RLG00000011823 RLG00000013252 RLG00000013782 RLG00000013944 RLG00000014480 RLG00000019084 RLG00000019544 RLG00000019751 RLG00000020093 RLG00000020094 RLG00000020551 RLG00000020838 RLG00000020982 RLG00000021059 RLG00000022067 RLG00000022604 RLG00000022632 RLG00000022849 RLG00000023962 RLG00000025767 RLG00000026838 RLG00000027291 RLG00000028131 RLG00000028210 RLG00000028834 RLG00000030169 RLG00000031271 RLG00000032327 RLG00000033996 RLG00000034546 RLG00000034654 RLG00000034810 RLG00000035087 RLG00000036782
rosa_multiflora Rmu_co8330487.1_g000001 Rmu_co8359977.1_g000001 Rmu_co8445341.1_g000001 Rmu_sc0000141.1_g000003 Rmu_sc0000353.1_g000018 Rmu_sc0000740.1_g000017 Rmu_sc0000744.1_g000138 Rmu_sc0000813.1_g000014 Rmu_sc0000908.1_g000003 Rmu_sc0000999.1_g000014 Rmu_sc0001103.1_g000001 Rmu_sc0001248.1_g000013 Rmu_sc0001282.1_g000021 Rmu_sc0001293.1_g000018 Rmu_sc0001608.1_g000015 Rmu_sc0001616.1_g000060 Rmu_sc0001851.1_g000013 Rmu_sc0001990.1_g000003 Rmu_sc0002138.1_g000002 Rmu_sc0002200.1_g000021 Rmu_sc0002230.1_g000029 Rmu_sc0002230.1_g000030 Rmu_sc0002702.1_g000017 Rmu_sc0002806.1_g000010 Rmu_sc0002809.1_g000023 Rmu_sc0002869.1_g000005 Rmu_sc0003156.1_g000027 Rmu_sc0003368.1_g000018 Rmu_sc0003642.1_g000007 Rmu_sc0003653.1_g000004 Rmu_sc0003791.1_g000008 Rmu_sc0003804.1_g000013 Rmu_sc0004015.1_g000022 Rmu_sc0004230.1_g000017 Rmu_sc0004368.1_g000011 Rmu_sc0004529.1_g000011 Rmu_sc0004540.1_g000011 Rmu_sc0005008.1_g000014 Rmu_sc0005171.1_g000001 Rmu_sc0005212.1_g000013 Rmu_sc0005947.1_g000003 Rmu_sc0006317.1_g000026 Rmu_sc0006578.1_g000005 Rmu_sc0006993.1_g000001 Rmu_sc0007442.1_g000002 Rmu_sc0007442.1_g000004 Rmu_sc0007876.1_g000004 Rmu_sc0007876.1_g000005 Rmu_sc0009624.1_g000004 Rmu_sc0009742.1_g000005 Rmu_sc0010306.1_g000007 Rmu_sc0011745.1_g000008 Rmu_sc0011800.1_g000003 Rmu_sc0012369.1_g000003 Rmu_sc0012787.1_g000003 Rmu_sc0012989.1_g000001 Rmu_sc0013416.1_g000003 Rmu_sc0021155.1_g000001 Rmu_sc0022372.1_g000001 Rmu_sc0023106.1_g000001 Rmu_sc0023684.1_g000003 Rmu_sc0023684.1_g000004 Rmu_sc0026897.1_g000001 Rmu_sc0027278.1_g000001 Rmu_sc0028533.1_g000001 Rmu_sc0028533.1_g000003 Rmu_sc0038440.1_g000001
rosa_roxburghii Rroxscaffold_1G00031730 Rroxscaffold_1G00033690 Rroxscaffold_1G00073100 Rroxscaffold_2G00079640 Rroxscaffold_2G00089760 Rroxscaffold_2G00091520 Rroxscaffold_2G00112420 Rroxscaffold_2G00115720 Rroxscaffold_2G00116170 Rroxscaffold_2G00116180 Rroxscaffold_2G00152590 Rroxscaffold_2G00155940 Rroxscaffold_3G00220010 Rroxscaffold_3G00234940 Rroxscaffold_3G00235250 Rroxscaffold_3G00237510 Rroxscaffold_3G00250950 Rroxscaffold_3G00250960 Rroxscaffold_3G00262030 Rroxscaffold_4G00299560 Rroxscaffold_4G00306000 Rroxscaffold_4G00311350 Rroxscaffold_4G00318530 Rroxscaffold_4G00329140 Rroxscaffold_5G00342020 Rroxscaffold_5G00350770 Rroxscaffold_5G00354620 Rroxscaffold_5G00354630 Rroxscaffold_5G00361180 Rroxscaffold_5G00377270 Rroxscaffold_6G00397870 Rroxscaffold_6G00397960 Rroxscaffold_6G00407290 Rroxscaffold_6G00408690 Rroxscaffold_6G00421900 Rroxscaffold_6G00421910 Rroxscaffold_7G00181630 Rroxscaffold_7G00182330 Rroxscaffold_7G00182340 Rroxscaffold_7G00212590 Rroxscaffold_7G00214060 Rroxscaffold_7G00214070 Rroxscaffold_7G00215940
rosa_rugosa Rorug01G0052800 Rorug01G0052800 Rorug01G0075200 Rorug01G0090500 Rorug01G0091500 Rorug01G0106000 Rorug01G0309300 Rorug01G0309400.1 Rorug02G0092000 Rorug02G0128200 Rorug02G0152800 Rorug02G0366100 Rorug02G0401500 Rorug02G0465600 Rorug02G0474400 Rorug03G0322500 Rorug04G0044000 Rorug04G0044100 Rorug04G0064800.1 Rorug04G0077400 Rorug04G0094800 Rorug04G0094800 Rorug04G0111400 Rorug04G0137800 Rorug04G0137900 Rorug04G0138000 Rorug04G0138000 Rorug04G0446200 Rorug05G0090600 Rorug05G0239900 Rorug05G0284400 Rorug05G0534400 Rorug05G0561600 Rorug06G0098100 Rorug06G0098100 Rorug06G0134500 Rorug06G0238500 Rorug06G0238600 Rorug07G0228900 Rorug07G0229000 Rorug07G0291600 Rorug07G0291700
rosa_samantha Rh1AG082200 Rh1AG129200 Rh1AG131500 Rh1AG159900 Rh1AG330800 Rh1AG408400 Rh1BG089600 Rh1CG086000 Rh1CG149200 Rh1CG405600 Rh1DG008200 Rh1DG015800 Rh1DG068000 Rh1DG118400 Rh1DG122500 Rh1DG202400 Rh1DG202500 Rh1DG266300 Rh1DG266400 Rh1DG287400 Rh1DG314700 Rh1DG314800 Rh2AG128400 Rh2AG128500 Rh2AG291000 Rh2AG347900 Rh2AG350700 Rh2AG415100 Rh2AG417200 Rh2AG497700 Rh2AG505000 Rh2AG507600 Rh2BG131300 Rh2BG233900 Rh2BG291700 Rh2BG291800 Rh2BG302700 Rh2BG302800 Rh2BG334700 Rh2BG334900 Rh2BG347000 Rh2BG347800 Rh2BG357100 Rh2BG528200 Rh2BG528300 Rh2BG603700 Rh2CG032300 Rh2CG034300 Rh2CG232600 Rh2CG483700 Rh2DG077400 Rh2DG103100 Rh2DG103200 Rh2DG287000 Rh2DG287200 Rh2DG375000 Rh2DG382700 Rh2DG537400 Rh2DG602900 Rh2DG603000 Rh3AG080800 Rh3AG217300 Rh3AG321800 Rh3BG082700 Rh3BG082800 Rh3BG168600 Rh3BG185900 Rh3BG224400 Rh3BG250500 Rh3BG260700 Rh3BG351300 Rh3BG353600 Rh3BG353700 Rh3CG082900 Rh3CG083000 Rh3CG176200 Rh3CG176300 Rh3CG219400 Rh3CG219500 Rh3CG254600 Rh3CG254700 Rh3CG256000 Rh3CG256100 Rh3CG257400 Rh3CG356200 Rh3CG356300 Rh3DG084300 Rh4AG030500 Rh4BG132300 Rh4BG139800 Rh4BG140000 Rh4CG027200 Rh4CG033100 Rh4CG033200 Rh4CG069600 Rh4CG103300 Rh4CG322600 Rh4DG028500 Rh4DG081000 Rh4DG190200 Rh4DG193500 Rh4DG212900 Rh4DG303900 Rh4DG342900 Rh5AG131000 Rh5AG166800 Rh5AG167000 Rh5AG201600 Rh5AG372200 Rh5AG372300 Rh5AG417900 Rh5BG082500 Rh5BG171200 Rh5BG171300 Rh5BG180300 Rh5BG194400 Rh5BG302800 Rh5BG343300 Rh5BG402700 Rh5BG428500 Rh5CG190700 Rh5CG190800 Rh5CG219100 Rh5CG451900 Rh5DG175200 Rh5DG175400 Rh5DG177000 Rh5DG177100 Rh5DG356000 Rh5DG356100 Rh5DG493500 Rh6AG006700 Rh6AG051700 Rh6AG064100 Rh6AG064200 Rh6AG064500 Rh6AG092800 Rh6AG152000 Rh6AG152100 Rh6AG291900 Rh6AG419000 Rh6AG465900 Rh6AG466000 Rh6BG125000 Rh6BG160600 Rh6BG161800 Rh6BG359100 Rh6BG359200 Rh6CG071400 Rh6CG071500 Rh6CG103500 Rh6CG103600 Rh6CG117200 Rh6CG123700 Rh6CG123800 Rh6CG156600 Rh6CG192500 Rh6CG208600 Rh6CG208700 Rh6CG365200 Rh6DG146200 Rh6DG146800 Rh6DG193200 Rh6DG193300 Rh6DG193400 Rh6DG349200 Rh7AG251100 Rh7AG259300 Rh7AG425100 Rh7BG262700 Rh7BG262900 Rh7BG369500 Rh7CG107400 Rh7CG107500 Rh7CG257400 Rh7CG267300 Rh7DG070500 Rh7DG105000 Rh7DG198500 Rh7DG291300 Rh7DG480600
rosa_wichuraiana Rw2G027920 Rw3G014750 Rw3G021490 Rw4G001910 Rw6G013120 Rw6G020040 Rw6G022930 Rw6G041900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 933
AccB7I CCANNNNNTGG 1 cut(s) 402
AccI GTMKAC 1 cut(s) 543
AccII CGCG 1 cut(s) 1371
AciI CCGC 3 cut(s) 137, 563, 620
AclWI GGATC 3 cut(s) 347, 563, 1315
AcsI RAATTY 2 cut(s) 598, 793
AcuI CTGAAG 3 cut(s) 387, 761, 1533
AdeI CACNNNGTG 1 cut(s) 1333
AfaI GTAC 6 cut(s) 20, 578, 976, 1337, 1347, 1639
AfiI CCNNNNNNNGG 7 cut(s) 64, 402, 457, 723, 971, 1026, 1092
AgsI TTSAA 6 cut(s) 110, 536, 650, 913, 1270, 1475
AjiI CACGTC 1 cut(s) 122
AjuI GAANNNNNNNTTGG 2 cut(s) 835, 867
AleI CACNNNNGTG 1 cut(s) 1005
AluBI AGCT 8 cut(s) 134, 242, 293, 475, 696, 1102, 1430, 1466
AluI AGCT 8 cut(s) 134, 242, 293, 475, 696, 1102, 1430, 1466
Alw21I GWGCWC 2 cut(s) 127, 477
Alw26I GTCTC 4 cut(s) 545, 620, 1516, 1541
Alw44I GTGCAC 1 cut(s) 123
AlwI GGATC 3 cut(s) 347, 563, 1315
Ama87I CYCGRG 1 cut(s) 450
AoxI GGCC 6 cut(s) 246, 256, 391, 704, 714, 804
ApaLI GTGCAC 1 cut(s) 123
ApeKI GCWGC 7 cut(s) 134, 274, 662, 821, 877, 996, 1430
ApoI RAATTY 2 cut(s) 598, 793
ArsI GACNNNNNNTTYG 2 cut(s) 355, 387
AspS9I GGNCC 3 cut(s) 392, 714, 1352
AsuC2I CCSGG 2 cut(s) 451, 452
AsuHPI GGTGA 5 cut(s) 259, 362, 373, 607, 1658
AvaI CYCGRG 1 cut(s) 450
AvaII GGWCC 1 cut(s) 1352
BaeGI GKGCMC 1 cut(s) 127
BanII GRGCYC 1 cut(s) 477
BauI CACGAG 3 cut(s) 1034, 1215, 1526
BbsI GAAGAC 2 cut(s) 33, 1227
Bbv12I GWGCWC 2 cut(s) 127, 477
BbvCI CCTCAGC 1 cut(s) 1103
BbvI GCAGC 7 cut(s) 121, 261, 674, 808, 889, 1008, 1417
BccI CCATC 4 cut(s) 62, 705, 1558, 1637
BceAI ACGGC 3 cut(s) 42, 243, 1520
BclI TGATCA 1 cut(s) 1717
BcnI CCSGG 2 cut(s) 451, 452
BcoDI GTCTC 4 cut(s) 545, 620, 1516, 1541
BfaI CTAG 7 cut(s) 54, 177, 431, 515, 566, 708, 1005
BfmI CTRYAG 1 cut(s) 994
BisI GCNGC 7 cut(s) 135, 275, 663, 822, 878, 997, 1431
BlpI GCTNAGC 1 cut(s) 210
BlsI GCNGC 7 cut(s) 136, 276, 664, 823, 879, 998, 1432
BmcAI AGTACT 1 cut(s) 1639
Bme1390I CCNGG 2 cut(s) 451, 452
Bme18I GGWCC 1 cut(s) 1352
BmeT110I CYCGRG 1 cut(s) 450
BmgBI CACGTC 1 cut(s) 122
BmgT120I GGNCC 3 cut(s) 392, 714, 1352
BmiI GGNNCC 1 cut(s) 394
BmrFI CCNGG 2 cut(s) 451, 452
BmrI ACTGGG 1 cut(s) 175
BmsI GCATC 5 cut(s) 660, 808, 1134, 1228, 1685
BmuI ACTGGG 1 cut(s) 175
BpiI GAAGAC 2 cut(s) 33, 1227
BpmI CTGGAG 1 cut(s) 929
Bpu10I CCTNAGC 2 cut(s) 243, 1103
Bpu1102I GCTNAGC 1 cut(s) 210
BpuMI CCSGG 2 cut(s) 451, 452
BsaBI GATNNNNATC 1 cut(s) 1053
BsaJI CCNNGG 3 cut(s) 356, 450, 980
BsaXI ACNNNNNCTCC 2 cut(s) 1091, 1121
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 402, 457, 723, 971, 1026, 1092
Bse1I ACTGG 2 cut(s) 170, 764
Bse3DI GCAATG 3 cut(s) 21, 865, 879
Bse8I GATNNNNATC 1 cut(s) 1053
BseDI CCNNGG 3 cut(s) 356, 450, 980
BseGI GGATG 2 cut(s) 73, 823
BseJI GATNNNNATC 1 cut(s) 1053
BseLI CCNNNNNNNGG 7 cut(s) 64, 402, 457, 723, 971, 1026, 1092
BseMI GCAATG 3 cut(s) 21, 865, 879
BseMII CTCAG 4 cut(s) 257, 1032, 1094, 1380
BseNI ACTGG 2 cut(s) 170, 764
BseRI GAGGAG 2 cut(s) 638, 1392
BseSI GKGCMC 1 cut(s) 127
BseXI GCAGC 7 cut(s) 121, 261, 674, 808, 889, 1008, 1417
BseYI CCCAGC 1 cut(s) 395
BsgI GTGCAG 1 cut(s) 681
Bsh1236I CGCG 1 cut(s) 1371
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 6 cut(s) 248, 258, 393, 706, 716, 806
BsiEI CGRYCG 1 cut(s) 79
BsiHKAI GWGCWC 2 cut(s) 127, 477
BsiHKCI CYCGRG 1 cut(s) 450
BsiSI CCGG 2 cut(s) 451, 1324
BslFI GGGAC 1 cut(s) 739
BslI CCNNNNNNNGG 7 cut(s) 64, 402, 457, 723, 971, 1026, 1092
BsmAI GTCTC 4 cut(s) 545, 620, 1516, 1541
BsmBI CGTCTC 1 cut(s) 545
BsmFI GGGAC 1 cut(s) 739
BsmI GAATGC 1 cut(s) 342
BsnI GGCC 6 cut(s) 248, 258, 393, 706, 716, 806
BsoBI CYCGRG 1 cut(s) 450
Bsp1286I GDGCHC 2 cut(s) 127, 477
Bsp1407I TGTACA 1 cut(s) 1335
Bsp143I GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
Bsp1720I GCTNAGC 1 cut(s) 210
Bsp19I CCATGG 1 cut(s) 356
BspACI CCGC 3 cut(s) 137, 563, 620
BspANI GGCC 6 cut(s) 248, 258, 393, 706, 716, 806
BspCNI CTCAG 4 cut(s) 256, 1033, 1095, 1381
BspFNI CGCG 1 cut(s) 1371
BspHI TCATGA 1 cut(s) 157
BspLI GGNNCC 1 cut(s) 394
BspMAI CTGCAG 1 cut(s) 998
BspPI GGATC 3 cut(s) 347, 563, 1315
BsrDI GCAATG 3 cut(s) 21, 865, 879
BsrGI TGTACA 1 cut(s) 1335
BsrI ACTGG 2 cut(s) 170, 764
BssECI CCNNGG 3 cut(s) 356, 450, 980
BssMI GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
BssSI CACGAG 3 cut(s) 1034, 1215, 1526
BssT1I CCWWGG 2 cut(s) 356, 980
Bst2BI CACGAG 3 cut(s) 1034, 1215, 1526
Bst4CI ACNGT 6 cut(s) 99, 730, 784, 1231, 1340, 1769
Bst6I CTCTTC 4 cut(s) 135, 920, 1509, 1692
BstAUI TGTACA 1 cut(s) 1335
BstC8I GCNNGC 3 cut(s) 994, 1452, 1533
BstDEI CTNAG 8 cut(s) 22, 210, 243, 294, 1041, 1103, 1389, 1424
BstDSI CCRYGG 1 cut(s) 356
BstF5I GGATG 2 cut(s) 73, 823
BstFNI CGCG 1 cut(s) 1371
BstKTI GATC 7 cut(s) 355, 571, 656, 1186, 1323, 1720, 1762
BstMAI GTCTC 4 cut(s) 545, 620, 1516, 1541
BstMBI GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 6 cut(s) 131, 442, 562, 897, 1247, 1447
BstNSI RCATGY 1 cut(s) 233
BstSCI CCNGG 2 cut(s) 449, 450
BstSFI CTRYAG 1 cut(s) 994
BstSLI GKGCMC 1 cut(s) 127
BstUI CGCG 1 cut(s) 1371
BstV1I GCAGC 7 cut(s) 121, 261, 674, 808, 889, 1008, 1417
BstV2I GAAGAC 2 cut(s) 33, 1227
BstX2I RGATCY 2 cut(s) 568, 1320
BstYI RGATCY 2 cut(s) 568, 1320
BsuRI GGCC 6 cut(s) 248, 258, 393, 706, 716, 806
BtgI CCRYGG 1 cut(s) 356
BtrI CACGTC 1 cut(s) 122
BtsCI GGATG 2 cut(s) 73, 823
BtsIMutI CAGTG 3 cut(s) 780, 1345, 1386
Cac8I GCNNGC 3 cut(s) 994, 1452, 1533
CciI TCATGA 1 cut(s) 157
Cfr13I GGNCC 3 cut(s) 392, 714, 1352
Cfr9I CCCGGG 1 cut(s) 450
CseI GACGC 2 cut(s) 562, 662
Csp6I GTAC 6 cut(s) 19, 577, 975, 1336, 1346, 1638
CviAII CATG 8 cut(s) 158, 230, 357, 547, 589, 814, 1469, 1597
CviQI GTAC 6 cut(s) 19, 577, 975, 1336, 1346, 1638
DdeI CTNAG 8 cut(s) 22, 210, 243, 294, 1041, 1103, 1389, 1424
DpnI GATC 7 cut(s) 354, 570, 655, 1185, 1322, 1719, 1761
DpnII GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
DraIII CACNNNGTG 1 cut(s) 1333
Eam1104I CTCTTC 4 cut(s) 135, 920, 1509, 1692
EarI CTCTTC 4 cut(s) 135, 920, 1509, 1692
Ecl136II GAGCTC 1 cut(s) 475
Eco130I CCWWGG 2 cut(s) 356, 980
Eco147I AGGCCT 2 cut(s) 706, 806
Eco24I GRGCYC 1 cut(s) 477
Eco47I GGWCC 1 cut(s) 1352
Eco53kI GAGCTC 1 cut(s) 475
Eco57I CTGAAG 3 cut(s) 387, 761, 1533
Eco88I CYCGRG 1 cut(s) 450
EcoICRI GAGCTC 1 cut(s) 475
EcoT14I CCWWGG 2 cut(s) 356, 980
EcoT38I GRGCYC 1 cut(s) 477
ErhI CCWWGG 2 cut(s) 356, 980
Esp3I CGTCTC 1 cut(s) 545
FaeI CATG 8 cut(s) 161, 233, 360, 550, 592, 817, 1472, 1600
FaqI GGGAC 1 cut(s) 739
FatI CATG 8 cut(s) 157, 229, 356, 546, 588, 813, 1468, 1596
FauNDI CATATG 1 cut(s) 1081
FbaI TGATCA 1 cut(s) 1717
FblI GTMKAC 1 cut(s) 543
Fnu4HI GCNGC 7 cut(s) 135, 275, 663, 822, 878, 997, 1431
FokI GGATG 2 cut(s) 80, 830
FriOI GRGCYC 1 cut(s) 477
Fsp4HI GCNGC 7 cut(s) 135, 275, 663, 822, 878, 997, 1431
FspBI CTAG 7 cut(s) 54, 177, 431, 515, 566, 708, 1005
GluI GCNGC 7 cut(s) 135, 275, 663, 822, 878, 997, 1431
GsaI CCCAGC 1 cut(s) 399
GsuI CTGGAG 1 cut(s) 929
HaeIII GGCC 6 cut(s) 248, 258, 393, 706, 716, 806
HapII CCGG 2 cut(s) 451, 1324
HgaI GACGC 2 cut(s) 562, 662
Hin1II CATG 8 cut(s) 161, 233, 360, 550, 592, 817, 1472, 1600
HinfI GANTC 8 cut(s) 72, 894, 942, 1111, 1244, 1366, 1571, 1666
HpaII CCGG 2 cut(s) 451, 1324
HphI GGTGA 5 cut(s) 259, 362, 373, 607, 1658
Hpy166II GTNNAC 7 cut(s) 95, 119, 125, 544, 1012, 1336, 1612
Hpy188I TCNGA 4 cut(s) 81, 283, 684, 1764
Hpy188III TCNNGA 9 cut(s) 158, 203, 939, 946, 1064, 1181, 1217, 1355, 1721
Hpy8I GTNNAC 7 cut(s) 95, 119, 125, 544, 1012, 1336, 1612
Hpy99I CGWCG 2 cut(s) 264, 678
HpyAV CCTTC 7 cut(s) 16, 83, 219, 522, 530, 1090, 1582
HpyCH4III ACNGT 6 cut(s) 99, 730, 784, 1231, 1340, 1769
HpyCH4IV ACGT 2 cut(s) 121, 1069
HpyF10VI GCNNNNNNNGC 6 cut(s) 131, 442, 562, 897, 1247, 1447
HpyF3I CTNAG 8 cut(s) 22, 210, 243, 294, 1041, 1103, 1389, 1424
HpySE526I ACGT 2 cut(s) 121, 1069
Hsp92II CATG 8 cut(s) 161, 233, 360, 550, 592, 817, 1472, 1600
Ksp22I TGATCA 1 cut(s) 1717
Kzo9I GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
LmnI GCTCC 5 cut(s) 131, 855, 1099, 1183, 1438
Lsp1109I GCAGC 7 cut(s) 121, 261, 674, 808, 889, 1008, 1417
LweI GCATC 5 cut(s) 660, 808, 1134, 1228, 1685
MaeI CTAG 7 cut(s) 54, 177, 431, 515, 566, 708, 1005
MaeII ACGT 2 cut(s) 121, 1069
MaeIII GTNAC 7 cut(s) 265, 361, 936, 1029, 1112, 1384, 1537
MalI GATC 7 cut(s) 354, 570, 655, 1185, 1322, 1719, 1761
MboI GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
MfeI CAATTG 1 cut(s) 310
MflI RGATCY 2 cut(s) 568, 1320
MhlI GDGCHC 2 cut(s) 127, 477
MluCI AATT 7 cut(s) 196, 310, 598, 640, 793, 908, 1746
MlyI GAGTC 5 cut(s) 81, 903, 936, 1120, 1253
MmeI TCCRAC 1 cut(s) 59
MseI TTAA 5 cut(s) 330, 747, 837, 1280, 1487
MslI CAYNNNNRTG 4 cut(s) 593, 1005, 1119, 1215
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 2 cut(s) 451, 1324
MspR9I CCNGG 2 cut(s) 451, 452
MunI CAATTG 1 cut(s) 310
Mva1269I GAATGC 1 cut(s) 342
MvnI CGCG 1 cut(s) 1371
MwoI GCNNNNNNNGC 6 cut(s) 131, 442, 562, 897, 1247, 1447
NciI CCSGG 2 cut(s) 451, 452
NcoI CCATGG 1 cut(s) 356
NdeI CATATG 1 cut(s) 1081
NdeII GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
NlaIII CATG 8 cut(s) 161, 233, 360, 550, 592, 817, 1472, 1600
NlaIV GGNNCC 1 cut(s) 394
NmeAIII GCCGAG 2 cut(s) 917, 1267
NmuCI GTSAC 6 cut(s) 265, 361, 936, 1029, 1112, 1384
NspI RCATGY 1 cut(s) 233
OliI CACNNNNGTG 1 cut(s) 1005
PagI TCATGA 1 cut(s) 157
PceI AGGCCT 2 cut(s) 706, 806
PcsI WCGNNNNNNNCGW 2 cut(s) 259, 1533
PctI GAATGC 1 cut(s) 342
PfeI GAWTC 3 cut(s) 1366, 1571, 1666
PflMI CCANNNNNTGG 1 cut(s) 402
PkrI GCNGC 7 cut(s) 136, 276, 664, 823, 879, 998, 1432
PleI GAGTC 5 cut(s) 80, 902, 936, 1119, 1252
PpsI GAGTC 5 cut(s) 80, 902, 936, 1119, 1252
PsiI TTATAA 1 cut(s) 933
Psp124BI GAGCTC 1 cut(s) 477
PspFI CCCAGC 1 cut(s) 395
PspN4I GGNNCC 1 cut(s) 394
PspPI GGNCC 3 cut(s) 392, 714, 1352
PstI CTGCAG 1 cut(s) 998
PsuI RGATCY 2 cut(s) 568, 1320
RsaI GTAC 6 cut(s) 20, 578, 976, 1337, 1347, 1639
RsaNI GTAC 6 cut(s) 19, 577, 975, 1336, 1346, 1638
RseI CAYNNNNRTG 4 cut(s) 593, 1005, 1119, 1215
SacI GAGCTC 1 cut(s) 477
SaqAI TTAA 5 cut(s) 330, 747, 837, 1280, 1487
SatI GCNGC 7 cut(s) 135, 275, 663, 822, 878, 997, 1431
Sau3AI GATC 7 cut(s) 352, 568, 653, 1183, 1320, 1717, 1759
Sau96I GGNCC 3 cut(s) 392, 714, 1352
ScaI AGTACT 1 cut(s) 1639
SchI GAGTC 5 cut(s) 81, 903, 936, 1120, 1253
ScrFI CCNGG 2 cut(s) 451, 452
SduI GDGCHC 2 cut(s) 127, 477
SfaNI GCATC 5 cut(s) 660, 808, 1134, 1228, 1685
SfcI CTRYAG 1 cut(s) 994
SinI GGWCC 1 cut(s) 1352
SmaI CCCGGG 1 cut(s) 452
SmiMI CAYNNNNRTG 4 cut(s) 593, 1005, 1119, 1215
Sse9I AATT 7 cut(s) 196, 310, 598, 640, 793, 908, 1746
SseBI AGGCCT 2 cut(s) 706, 806
SsiI CCGC 3 cut(s) 137, 563, 620
SspMI CTAG 7 cut(s) 54, 177, 431, 515, 566, 708, 1005
SstI GAGCTC 1 cut(s) 477
StuI AGGCCT 2 cut(s) 706, 806
StyD4I CCNGG 2 cut(s) 449, 450
StyI CCWWGG 2 cut(s) 356, 980
TaaI ACNGT 6 cut(s) 99, 730, 784, 1231, 1340, 1769
TaiI ACGT 2 cut(s) 124, 1072
TaqI TCGA 4 cut(s) 253, 656, 676, 1109
TaqII GACCGA 1 cut(s) 65
TasI AATT 7 cut(s) 196, 310, 598, 640, 793, 908, 1746
TatI WGTACW 4 cut(s) 18, 1335, 1345, 1637
TfiI GAWTC 3 cut(s) 1366, 1571, 1666
Tru1I TTAA 5 cut(s) 330, 747, 837, 1280, 1487
Tru9I TTAA 5 cut(s) 330, 747, 837, 1280, 1487
TscAI CASTG 3 cut(s) 787, 1345, 1393
TseFI GTSAC 6 cut(s) 265, 361, 936, 1029, 1112, 1384
TseI GCWGC 7 cut(s) 134, 274, 662, 821, 877, 996, 1430
Tsp45I GTSAC 6 cut(s) 265, 361, 936, 1029, 1112, 1384
TspDTI ATGAA 9 cut(s) 234, 623, 1167, 1305, 1563, 1601, 1613, 1616, 1710
TspGWI ACGGA 1 cut(s) 1239
TspMI CCCGGG 1 cut(s) 450
TspRI CASTG 3 cut(s) 787, 1345, 1393
Van91I CCANNNNNTGG 1 cut(s) 402
VneI GTGCAC 1 cut(s) 123
VpaK11BI GGWCC 1 cut(s) 1352
XapI RAATTY 2 cut(s) 598, 793
XceI RCATGY 1 cut(s) 233
XmaI CCCGGG 1 cut(s) 450
XmiI GTMKAC 1 cut(s) 543
XspI CTAG 7 cut(s) 54, 177, 431, 515, 566, 708, 1005
ZrmI AGTACT 1 cut(s) 1639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.