Transposase family tnp2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 433 |
| AclWI | GGATC | 1 cut(s) | 11 |
| AcoI | YGGCCR | 1 cut(s) | 184 |
| AfaI | GTAC | 2 cut(s) | 29, 336 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 463 |
| AflIII | ACRYGT | 1 cut(s) | 473 |
| AgeI | ACCGGT | 1 cut(s) | 337 |
| AjnI | CCWGG | 1 cut(s) | 400 |
| Alw21I | GWGCWC | 1 cut(s) | 364 |
| Alw26I | GTCTC | 1 cut(s) | 348 |
| Alw44I | GTGCAC | 1 cut(s) | 360 |
| AlwI | GGATC | 1 cut(s) | 11 |
| AoxI | GGCC | 1 cut(s) | 184 |
| ApaLI | GTGCAC | 1 cut(s) | 360 |
| ApeKI | GCWGC | 2 cut(s) | 236, 392 |
| AsiGI | ACCGGT | 1 cut(s) | 337 |
| AspS9I | GGNCC | 1 cut(s) | 10 |
| AvaII | GGWCC | 1 cut(s) | 10 |
| BaeGI | GKGCMC | 1 cut(s) | 364 |
| Bbv12I | GWGCWC | 1 cut(s) | 364 |
| BbvI | GCAGC | 2 cut(s) | 248, 379 |
| BccI | CCATC | 2 cut(s) | 142, 465 |
| BceAI | ACGGC | 1 cut(s) | 171 |
| BciT130I | CCWGG | 1 cut(s) | 402 |
| BciVI | GTATCC | 1 cut(s) | 420 |
| BcoDI | GTCTC | 1 cut(s) | 348 |
| BfuI | GTATCC | 1 cut(s) | 420 |
| BisI | GCNGC | 3 cut(s) | 237, 393, 434 |
| BlsI | GCNGC | 3 cut(s) | 238, 394, 435 |
| Bme1390I | CCNGG | 1 cut(s) | 402 |
| Bme18I | GGWCC | 1 cut(s) | 10 |
| BmgT120I | GGNCC | 1 cut(s) | 10 |
| BmrFI | CCNGG | 1 cut(s) | 402 |
| BmsI | GCATC | 2 cut(s) | 115, 129 |
| Bsa29I | ATCGAT | 1 cut(s) | 137 |
| BsaJI | CCNNGG | 2 cut(s) | 347, 400 |
| BsaWI | WCCGGW | 1 cut(s) | 337 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 324, 354 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 463 |
| Bse118I | RCCGGY | 1 cut(s) | 337 |
| Bse1I | ACTGG | 1 cut(s) | 112 |
| BseBI | CCWGG | 1 cut(s) | 402 |
| BseCI | ATCGAT | 1 cut(s) | 137 |
| BseDI | CCNNGG | 2 cut(s) | 347, 400 |
| BseGI | GGATG | 1 cut(s) | 124 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 463 |
| BseNI | ACTGG | 1 cut(s) | 112 |
| BseSI | GKGCMC | 1 cut(s) | 364 |
| BseXI | GCAGC | 2 cut(s) | 248, 379 |
| BshFI | GGCC | 1 cut(s) | 186 |
| BshTI | ACCGGT | 1 cut(s) | 337 |
| BshVI | ATCGAT | 1 cut(s) | 137 |
| BsiHKAI | GWGCWC | 1 cut(s) | 364 |
| BsiSI | CCGG | 1 cut(s) | 338 |
| BsiWI | CGTACG | 1 cut(s) | 27 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 463 |
| BsmAI | GTCTC | 1 cut(s) | 348 |
| BsnI | GGCC | 1 cut(s) | 186 |
| Bsp1286I | GDGCHC | 1 cut(s) | 364 |
| Bsp143I | GATC | 1 cut(s) | 16 |
| BspACI | CCGC | 1 cut(s) | 433 |
| BspANI | GGCC | 1 cut(s) | 186 |
| BspDI | ATCGAT | 1 cut(s) | 137 |
| BspPI | GGATC | 1 cut(s) | 11 |
| BsrFI | RCCGGY | 1 cut(s) | 337 |
| BsrI | ACTGG | 1 cut(s) | 112 |
| BssAI | RCCGGY | 1 cut(s) | 337 |
| BssECI | CCNNGG | 2 cut(s) | 347, 400 |
| BssMI | GATC | 1 cut(s) | 16 |
| BssT1I | CCWWGG | 1 cut(s) | 347 |
| Bst2UI | CCWGG | 1 cut(s) | 402 |
| Bst4CI | ACNGT | 3 cut(s) | 27, 277, 366 |
| BstF5I | GGATG | 1 cut(s) | 124 |
| BstKTI | GATC | 1 cut(s) | 19 |
| BstMAI | GTCTC | 1 cut(s) | 348 |
| BstMBI | GATC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 301 |
| BstNI | CCWGG | 1 cut(s) | 402 |
| BstNSI | RCATGY | 1 cut(s) | 477 |
| BstSCI | CCNGG | 1 cut(s) | 400 |
| BstSLI | GKGCMC | 1 cut(s) | 364 |
| BstV1I | GCAGC | 2 cut(s) | 248, 379 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 182 |
| Bsu15I | ATCGAT | 1 cut(s) | 137 |
| BsuI | GTATCC | 1 cut(s) | 420 |
| BsuRI | GGCC | 1 cut(s) | 186 |
| BsuTUI | ATCGAT | 1 cut(s) | 137 |
| BtsCI | GGATG | 1 cut(s) | 124 |
| Cfr10I | RCCGGY | 1 cut(s) | 337 |
| Cfr13I | GGNCC | 1 cut(s) | 10 |
| ClaI | ATCGAT | 1 cut(s) | 137 |
| Csp6I | GTAC | 2 cut(s) | 28, 335 |
| CspAI | ACCGGT | 1 cut(s) | 337 |
| CviAII | CATG | 4 cut(s) | 50, 103, 143, 474 |
| CviJI | RGCY | 4 cut(s) | 186, 239, 392, 467 |
| CviKI_1 | RGCY | 4 cut(s) | 186, 239, 392, 467 |
| CviQI | GTAC | 2 cut(s) | 28, 335 |
| DpnI | GATC | 1 cut(s) | 18 |
| DpnII | GATC | 1 cut(s) | 16 |
| EaeI | YGGCCR | 1 cut(s) | 184 |
| Eco130I | CCWWGG | 1 cut(s) | 347 |
| Eco32I | GATATC | 1 cut(s) | 421 |
| Eco47I | GGWCC | 1 cut(s) | 10 |
| EcoRII | CCWGG | 1 cut(s) | 400 |
| EcoRV | GATATC | 1 cut(s) | 421 |
| EcoT14I | CCWWGG | 1 cut(s) | 347 |
| EcoT22I | ATGCAT | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 347 |
| FaeI | CATG | 4 cut(s) | 53, 106, 146, 477 |
| FaiI | YATR | 7 cut(s) | 51, 87, 89, 104, 144, 475, 487 |
| FatI | CATG | 4 cut(s) | 49, 102, 142, 473 |
| FauNDI | CATATG | 1 cut(s) | 87 |
| Fnu4HI | GCNGC | 3 cut(s) | 237, 393, 434 |
| FokI | GGATG | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 3 cut(s) | 237, 393, 434 |
| GluI | GCNGC | 3 cut(s) | 237, 393, 434 |
| HaeIII | GGCC | 1 cut(s) | 186 |
| HapII | CCGG | 1 cut(s) | 338 |
| Hin1II | CATG | 4 cut(s) | 53, 106, 146, 477 |
| HinfI | GANTC | 1 cut(s) | 54 |
| HpaII | CCGG | 1 cut(s) | 338 |
| Hpy166II | GTNNAC | 2 cut(s) | 10, 362 |
| Hpy188III | TCNNGA | 1 cut(s) | 20 |
| Hpy8I | GTNNAC | 2 cut(s) | 10, 362 |
| HpyCH4III | ACNGT | 3 cut(s) | 27, 277, 366 |
| HpyCH4V | TGCA | 3 cut(s) | 142, 236, 362 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 301 |
| Hsp92II | CATG | 4 cut(s) | 53, 106, 146, 477 |
| Kzo9I | GATC | 1 cut(s) | 16 |
| LpnPI | CCDG | 6 cut(s) | 26, 33, 125, 351, 387, 414 |
| Lsp1109I | GCAGC | 2 cut(s) | 248, 379 |
| LweI | GCATC | 2 cut(s) | 115, 129 |
| MaeIII | GTNAC | 2 cut(s) | 73, 248 |
| MalI | GATC | 1 cut(s) | 18 |
| MboI | GATC | 1 cut(s) | 16 |
| MboII | GAAGA | 1 cut(s) | 80 |
| MhlI | GDGCHC | 1 cut(s) | 364 |
| MluCI | AATT | 4 cut(s) | 94, 155, 210, 279 |
| MlyI | GAGTC | 1 cut(s) | 48 |
| MmeI | TCCRAC | 1 cut(s) | 96 |
| MnlI | CCTC | 5 cut(s) | 45, 58, 238, 260, 475 |
| Mph1103I | ATGCAT | 1 cut(s) | 144 |
| MseI | TTAA | 2 cut(s) | 282, 315 |
| MslI | CAYNNNNRTG | 1 cut(s) | 147 |
| MspI | CCGG | 1 cut(s) | 338 |
| MspR9I | CCNGG | 1 cut(s) | 402 |
| MvaI | CCWGG | 1 cut(s) | 402 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 301 |
| NdeI | CATATG | 1 cut(s) | 87 |
| NdeII | GATC | 1 cut(s) | 16 |
| NlaIII | CATG | 4 cut(s) | 53, 106, 146, 477 |
| NmuCI | GTSAC | 1 cut(s) | 73 |
| NsiI | ATGCAT | 1 cut(s) | 144 |
| NspI | RCATGY | 1 cut(s) | 477 |
| PciI | ACATGT | 1 cut(s) | 473 |
| Pfl23II | CGTACG | 1 cut(s) | 27 |
| PinAI | ACCGGT | 1 cut(s) | 337 |
| PkrI | GCNGC | 3 cut(s) | 238, 394, 435 |
| PleI | GAGTC | 1 cut(s) | 48 |
| PpsI | GAGTC | 1 cut(s) | 48 |
| PscI | ACATGT | 1 cut(s) | 473 |
| Psp6I | CCWGG | 1 cut(s) | 400 |
| PspGI | CCWGG | 1 cut(s) | 400 |
| PspLI | CGTACG | 1 cut(s) | 27 |
| PspPI | GGNCC | 1 cut(s) | 10 |
| RsaI | GTAC | 2 cut(s) | 29, 336 |
| RsaNI | GTAC | 2 cut(s) | 28, 335 |
| RseI | CAYNNNNRTG | 1 cut(s) | 147 |
| SaqAI | TTAA | 2 cut(s) | 282, 315 |
| SatI | GCNGC | 3 cut(s) | 237, 393, 434 |
| Sau3AI | GATC | 1 cut(s) | 16 |
| Sau96I | GGNCC | 1 cut(s) | 10 |
| SchI | GAGTC | 1 cut(s) | 48 |
| ScrFI | CCNGG | 1 cut(s) | 402 |
| SduI | GDGCHC | 1 cut(s) | 364 |
| SetI | ASST | 4 cut(s) | 15, 37, 45, 486 |
| SfaNI | GCATC | 2 cut(s) | 115, 129 |
| SinI | GGWCC | 1 cut(s) | 10 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 147 |
| Sse9I | AATT | 4 cut(s) | 94, 155, 210, 279 |
| SsiI | CCGC | 1 cut(s) | 433 |
| StyD4I | CCNGG | 1 cut(s) | 400 |
| StyI | CCWWGG | 1 cut(s) | 347 |
| TaaI | ACNGT | 3 cut(s) | 27, 277, 366 |
| TaqI | TCGA | 1 cut(s) | 137 |
| TasI | AATT | 4 cut(s) | 94, 155, 210, 279 |
| TauI | GCSGC | 1 cut(s) | 436 |
| Tru1I | TTAA | 2 cut(s) | 282, 315 |
| Tru9I | TTAA | 2 cut(s) | 282, 315 |
| TseFI | GTSAC | 1 cut(s) | 73 |
| TseI | GCWGC | 2 cut(s) | 236, 392 |
| Tsp45I | GTSAC | 1 cut(s) | 73 |
| TspDTI | ATGAA | 3 cut(s) | 38, 159, 367 |
| VneI | GTGCAC | 1 cut(s) | 360 |
| VpaK11BI | GGWCC | 1 cut(s) | 10 |
| XceI | RCATGY | 1 cut(s) | 477 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 100 |
| Zsp2I | ATGCAT | 1 cut(s) | 144 |