Rorug06G0098100

udp-glucuronic acid decarboxylase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
13121591 .. 13124856
3266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0098100.1

Sequence Viewer

Length: 1203 bp
ATGGCACAGGCAAAACCTGTGGAGAAACCCCAAGAATCCTCTGACATGGAAGTGAAAGATACAGGGAACACTACTTCCTTCAAATTCAATGCTCAGGCACCTGAATTTGTTCCCAGATCGCATACCCAAATGCCGATTTCGGGTTATTTCTATCCCTGCTTTCACTTTCTTGGTGACACTGCTTCCCCGGATTGGTTTTATATTGGGGACCAAGAAATACCTCCTTATTTGATCTCCAATCCCAATATTCCTATAACCAATCGATCCAAGAATGTACTACCCGATGAGCTTCAGCAGAAAATCATCAAACAGGTGGAGTACCAGTTCAGTGACATGAGTCTATTAGCAAATGAATCATTAGCAAAACACATGAGTAAAGATCCTGAAGGATATGTTCCGATATCTGTTGTTGCTTCTACGAAAAAGATGAAGTCACTTATTAGTAACAACCATATGCTTGCACAAGCACTCCGGTCCTCTTCAAAGCTTGTTGTAAGTGATGATGGAAAGAAGGTTAAACGTAAGCACCCTTTCACTGAAAAAGACAAAGAAGAATTGCAGTCTCGTACTGTTGTGGCAGAGAACTTGCCAGAAGATCACTCTCATCAAAACCTAGAGAAGATATTTAGTGTGGTTGGGAGTGTGAAAACTATCCGAATTTGCCATCCCCACGAATCCAATTCTTCCCGGTCCAAAGGTGATTTCATTATTAGCAACAAGCTCCATGCGCTGGTGGAGTACGAGACAACAGACATAGCAGATAAAGCGGTTGATAAGTTGAGTGATGAGAGGAACTGGAGAAAAGGACTCCGAGTAAGGACTTTGGTCAGACGCTCGCCAAAATCAGTTTTGAAGAACAGAAAGTCTGAATTCGATATTTTAGAGGATGATGACACACCACACTATGAATCTGCAGAAGATAGTTCTCAGCCAAGCCACATTGATCTGGTTATTGATAGTATGAATGCTGAAGAAAATTCAATGGGATCCAAGAAAGGATGGGCATGGGGACGTGGGAAGGCCCGGGGGCGTGGTGCAAGCCAGAGTGGACGTGGCCTGATTGCTCCATCTCCGCAATCAGGCTGCGCCATACAGTGTGAAGCCTCTGCCAAACCAAATACAAAGGGCCCGAGGATGCCGGACGGGACTAGGGGTTTCACCATGGGAAGAGGCAAGCCATTAAGAACCACGAGTTCGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

400

Amino Acids

44.6

Weight (kDa)

8.91

Isoelectric Point (pI)

49.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 101 - 159 1.1e-18 La domain
RRM_1 PF00076 194 - 261 2.2e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000040)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00150 FvH4_2g13531 FvH4_2g21543 FvH4_3g32800 FvH4_3g32802 FvH4_4g00091 FvH4_4g00092 FvH4_5g22070 FvH4_5g31391 FvH4_6g11351 FvH4_6g23430 FvH4_6g23672 FvH4_6g52753
malus_domestica MD03G1101500.v1.1 MD08G1234800.v1.1
pyrus_communis pycom07g24860 pycom09g07860 pycom10g09330 pycom10g15360 pycom11g01600 pycom11g13460 pycom13g15580
rosa_chinensis RchiOBHm_Chr1g0332021 RchiOBHm_Chr2g0095801 RchiOBHm_Chr2g0111771 RchiOBHm_Chr2g0127541 RchiOBHm_Chr2g0136581 RchiOBHm_Chr2g0136591 RchiOBHm_Chr2g0143311 RchiOBHm_Chr2g0145131 RchiOBHm_Chr2g0151391 RchiOBHm_Chr3g0468771 RchiOBHm_Chr3g0473281 RchiOBHm_Chr3g0481961 RchiOBHm_Chr4g0393741 RchiOBHm_Chr4g0397391 RchiOBHm_Chr4g0435991 RchiOBHm_Chr5g0015951 RchiOBHm_Chr5g0016651 RchiOBHm_Chr5g0039191 RchiOBHm_Chr5g0039211 RchiOBHm_Chr6g0254441 RchiOBHm_Chr6g0260911 RchiOBHm_Chr6g0274501 RchiOBHm_Chr6g0274511 RchiOBHm_Chr7g0184951 RchiOBHm_Chr7g0201701 RchiOBHm_Chr7g0201721 RchiOBHm_Chr7g0201731 RchiOBHm_Chr7g0234921 RchiOBHm_Chr7g0237841
rosa_laevigata RLG00000001204 RLG00000001230 RLG00000001341 RLG00000001513 RLG00000001971 RLG00000002177 RLG00000002360 RLG00000003112 RLG00000003130 RLG00000003854 RLG00000008209 RLG00000008322 RLG00000008412 RLG00000008524 RLG00000009491 RLG00000009908 RLG00000011823 RLG00000013252 RLG00000013782 RLG00000013944 RLG00000014480 RLG00000019084 RLG00000019544 RLG00000019751 RLG00000020093 RLG00000020094 RLG00000020551 RLG00000020838 RLG00000020982 RLG00000021059 RLG00000022067 RLG00000022604 RLG00000022632 RLG00000022849 RLG00000023962 RLG00000025767 RLG00000026838 RLG00000027291 RLG00000028131 RLG00000028210 RLG00000028834 RLG00000030169 RLG00000031271 RLG00000032327 RLG00000033996 RLG00000034546 RLG00000034654 RLG00000034810 RLG00000035087 RLG00000036782
rosa_multiflora Rmu_co8330487.1_g000001 Rmu_co8359977.1_g000001 Rmu_co8445341.1_g000001 Rmu_sc0000141.1_g000003 Rmu_sc0000353.1_g000018 Rmu_sc0000740.1_g000017 Rmu_sc0000744.1_g000138 Rmu_sc0000813.1_g000014 Rmu_sc0000908.1_g000003 Rmu_sc0000999.1_g000014 Rmu_sc0001103.1_g000001 Rmu_sc0001248.1_g000013 Rmu_sc0001282.1_g000021 Rmu_sc0001293.1_g000018 Rmu_sc0001608.1_g000015 Rmu_sc0001616.1_g000060 Rmu_sc0001851.1_g000013 Rmu_sc0001990.1_g000003 Rmu_sc0002138.1_g000002 Rmu_sc0002200.1_g000021 Rmu_sc0002230.1_g000029 Rmu_sc0002230.1_g000030 Rmu_sc0002702.1_g000017 Rmu_sc0002806.1_g000010 Rmu_sc0002809.1_g000023 Rmu_sc0002869.1_g000005 Rmu_sc0003156.1_g000027 Rmu_sc0003368.1_g000018 Rmu_sc0003642.1_g000007 Rmu_sc0003653.1_g000004 Rmu_sc0003791.1_g000008 Rmu_sc0003804.1_g000013 Rmu_sc0004015.1_g000022 Rmu_sc0004230.1_g000017 Rmu_sc0004368.1_g000011 Rmu_sc0004529.1_g000011 Rmu_sc0004540.1_g000011 Rmu_sc0005008.1_g000014 Rmu_sc0005171.1_g000001 Rmu_sc0005212.1_g000013 Rmu_sc0005947.1_g000003 Rmu_sc0006317.1_g000026 Rmu_sc0006578.1_g000005 Rmu_sc0006993.1_g000001 Rmu_sc0007442.1_g000002 Rmu_sc0007442.1_g000004 Rmu_sc0007876.1_g000004 Rmu_sc0007876.1_g000005 Rmu_sc0009624.1_g000004 Rmu_sc0009742.1_g000005 Rmu_sc0010306.1_g000007 Rmu_sc0011745.1_g000008 Rmu_sc0011800.1_g000003 Rmu_sc0012369.1_g000003 Rmu_sc0012787.1_g000003 Rmu_sc0012989.1_g000001 Rmu_sc0013416.1_g000003 Rmu_sc0021155.1_g000001 Rmu_sc0022372.1_g000001 Rmu_sc0023106.1_g000001 Rmu_sc0023684.1_g000003 Rmu_sc0023684.1_g000004 Rmu_sc0026897.1_g000001 Rmu_sc0027278.1_g000001 Rmu_sc0028533.1_g000001 Rmu_sc0028533.1_g000003 Rmu_sc0038440.1_g000001
rosa_roxburghii Rroxscaffold_1G00031730 Rroxscaffold_1G00033690 Rroxscaffold_1G00073100 Rroxscaffold_2G00079640 Rroxscaffold_2G00089760 Rroxscaffold_2G00091520 Rroxscaffold_2G00112420 Rroxscaffold_2G00115720 Rroxscaffold_2G00116170 Rroxscaffold_2G00116180 Rroxscaffold_2G00152590 Rroxscaffold_2G00155940 Rroxscaffold_3G00220010 Rroxscaffold_3G00234940 Rroxscaffold_3G00235250 Rroxscaffold_3G00237510 Rroxscaffold_3G00250950 Rroxscaffold_3G00250960 Rroxscaffold_3G00262030 Rroxscaffold_4G00299560 Rroxscaffold_4G00306000 Rroxscaffold_4G00311350 Rroxscaffold_4G00318530 Rroxscaffold_4G00329140 Rroxscaffold_5G00342020 Rroxscaffold_5G00350770 Rroxscaffold_5G00354620 Rroxscaffold_5G00354630 Rroxscaffold_5G00361180 Rroxscaffold_5G00377270 Rroxscaffold_6G00397870 Rroxscaffold_6G00397960 Rroxscaffold_6G00407290 Rroxscaffold_6G00408690 Rroxscaffold_6G00421900 Rroxscaffold_6G00421910 Rroxscaffold_7G00181630 Rroxscaffold_7G00182330 Rroxscaffold_7G00182340 Rroxscaffold_7G00212590 Rroxscaffold_7G00214060 Rroxscaffold_7G00214070 Rroxscaffold_7G00215940
rosa_rugosa Rorug01G0052800 Rorug01G0052800 Rorug01G0075200 Rorug01G0090500 Rorug01G0091500 Rorug01G0106000 Rorug01G0309300 Rorug01G0309400.1 Rorug02G0092000 Rorug02G0128200 Rorug02G0152800 Rorug02G0366100 Rorug02G0401500 Rorug02G0465600 Rorug02G0474400 Rorug03G0322500 Rorug04G0044000 Rorug04G0044100 Rorug04G0064800.1 Rorug04G0077400 Rorug04G0094800 Rorug04G0094800 Rorug04G0111400 Rorug04G0137800 Rorug04G0137900 Rorug04G0138000 Rorug04G0138000 Rorug04G0446200 Rorug05G0090600 Rorug05G0239900 Rorug05G0284400 Rorug05G0534400 Rorug05G0561600 Rorug06G0098100 Rorug06G0098100 Rorug06G0134500 Rorug06G0238500 Rorug06G0238600 Rorug07G0228900 Rorug07G0229000 Rorug07G0291600 Rorug07G0291700
rosa_samantha Rh1AG082200 Rh1AG129200 Rh1AG131500 Rh1AG159900 Rh1AG330800 Rh1AG408400 Rh1BG089600 Rh1CG086000 Rh1CG149200 Rh1CG405600 Rh1DG008200 Rh1DG015800 Rh1DG068000 Rh1DG118400 Rh1DG122500 Rh1DG202400 Rh1DG202500 Rh1DG266300 Rh1DG266400 Rh1DG287400 Rh1DG314700 Rh1DG314800 Rh2AG128400 Rh2AG128500 Rh2AG291000 Rh2AG347900 Rh2AG350700 Rh2AG415100 Rh2AG417200 Rh2AG497700 Rh2AG505000 Rh2AG507600 Rh2BG131300 Rh2BG233900 Rh2BG291700 Rh2BG291800 Rh2BG302700 Rh2BG302800 Rh2BG334700 Rh2BG334900 Rh2BG347000 Rh2BG347800 Rh2BG357100 Rh2BG528200 Rh2BG528300 Rh2BG603700 Rh2CG032300 Rh2CG034300 Rh2CG232600 Rh2CG483700 Rh2DG077400 Rh2DG103100 Rh2DG103200 Rh2DG287000 Rh2DG287200 Rh2DG375000 Rh2DG382700 Rh2DG537400 Rh2DG602900 Rh2DG603000 Rh3AG080800 Rh3AG217300 Rh3AG321800 Rh3BG082700 Rh3BG082800 Rh3BG168600 Rh3BG185900 Rh3BG224400 Rh3BG250500 Rh3BG260700 Rh3BG351300 Rh3BG353600 Rh3BG353700 Rh3CG082900 Rh3CG083000 Rh3CG176200 Rh3CG176300 Rh3CG219400 Rh3CG219500 Rh3CG254600 Rh3CG254700 Rh3CG256000 Rh3CG256100 Rh3CG257400 Rh3CG356200 Rh3CG356300 Rh3DG084300 Rh4AG030500 Rh4BG132300 Rh4BG139800 Rh4BG140000 Rh4CG027200 Rh4CG033100 Rh4CG033200 Rh4CG069600 Rh4CG103300 Rh4CG322600 Rh4DG028500 Rh4DG081000 Rh4DG190200 Rh4DG193500 Rh4DG212900 Rh4DG303900 Rh4DG342900 Rh5AG131000 Rh5AG166800 Rh5AG167000 Rh5AG201600 Rh5AG372200 Rh5AG372300 Rh5AG417900 Rh5BG082500 Rh5BG171200 Rh5BG171300 Rh5BG180300 Rh5BG194400 Rh5BG302800 Rh5BG343300 Rh5BG402700 Rh5BG428500 Rh5CG190700 Rh5CG190800 Rh5CG219100 Rh5CG451900 Rh5DG175200 Rh5DG175400 Rh5DG177000 Rh5DG177100 Rh5DG356000 Rh5DG356100 Rh5DG493500 Rh6AG006700 Rh6AG051700 Rh6AG064100 Rh6AG064200 Rh6AG064500 Rh6AG092800 Rh6AG152000 Rh6AG152100 Rh6AG291900 Rh6AG419000 Rh6AG465900 Rh6AG466000 Rh6BG125000 Rh6BG160600 Rh6BG161800 Rh6BG359100 Rh6BG359200 Rh6CG071400 Rh6CG071500 Rh6CG103500 Rh6CG103600 Rh6CG117200 Rh6CG123700 Rh6CG123800 Rh6CG156600 Rh6CG192500 Rh6CG208600 Rh6CG208700 Rh6CG365200 Rh6DG146200 Rh6DG146800 Rh6DG193200 Rh6DG193300 Rh6DG193400 Rh6DG349200 Rh7AG251100 Rh7AG259300 Rh7AG425100 Rh7BG262700 Rh7BG262900 Rh7BG369500 Rh7CG107400 Rh7CG107500 Rh7CG257400 Rh7CG267300 Rh7DG070500 Rh7DG105000 Rh7DG198500 Rh7DG291300 Rh7DG480600
rosa_wichuraiana Rw2G027920 Rw3G014750 Rw3G021490 Rw4G001910 Rw6G013120 Rw6G020040 Rw6G022930 Rw6G041900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 97
AccB7I CCANNNNNTGG 1 cut(s) 730
AciI CCGC 2 cut(s) 767, 1073
AclWI GGATC 4 cut(s) 258, 374, 981, 994
AcsI RAATTY 5 cut(s) 83, 104, 657, 869, 976
AcuI CTGAAG 3 cut(s) 275, 405, 990
AfaI GTAC 4 cut(s) 276, 320, 568, 740
AfiI CCNNNNNNNGG 4 cut(s) 140, 192, 730, 1079
AgsI TTSAA 5 cut(s) 82, 88, 483, 853, 981
AjiI CACGTC 2 cut(s) 1013, 1052
AjuI GAANNNNNNNTTGG 2 cut(s) 686, 718
AloI GAACNNNNNNTCC 4 cut(s) 59, 91, 308, 340
AluBI AGCT 3 cut(s) 289, 487, 721
AluI AGCT 3 cut(s) 289, 487, 721
Alw26I GTCTC 2 cut(s) 567, 737
AlwI GGATC 4 cut(s) 258, 374, 981, 994
Ama87I CYCGRG 2 cut(s) 1023, 1129
AoxI GGCC 3 cut(s) 1020, 1054, 1126
ApaI GGGCCC 1 cut(s) 1130
ApeKI GCWGC 1 cut(s) 1083
ApoI RAATTY 5 cut(s) 83, 104, 657, 869, 976
Asp700I GAANNNNTTC 1 cut(s) 108
AspLEI GCGC 2 cut(s) 730, 1088
AspS9I GGNCC 6 cut(s) 208, 474, 690, 1021, 1126, 1127
AsuC2I CCSGG 4 cut(s) 188, 688, 1024, 1025
AsuHPI GGTGA 3 cut(s) 185, 710, 1150
AvaI CYCGRG 2 cut(s) 1023, 1129
AvaII GGWCC 3 cut(s) 208, 474, 690
BaeGI GKGCMC 1 cut(s) 1130
BamHI GGATCC 1 cut(s) 986
BanI GGYRCC 1 cut(s) 97
BanII GRGCYC 1 cut(s) 1130
BauI CACGAG 1 cut(s) 1189
BbvI GCAGC 1 cut(s) 1070
BccI CCATC 4 cut(s) 497, 672, 993, 1075
BcnI CCSGG 4 cut(s) 188, 688, 1024, 1025
BcoDI GTCTC 2 cut(s) 567, 737
BfaI CTAG 2 cut(s) 614, 1149
BfmI CTRYAG 1 cut(s) 912
BisI GCNGC 1 cut(s) 1084
BlsI GCNGC 1 cut(s) 1085
Bme1390I CCNGG 4 cut(s) 188, 688, 1024, 1025
Bme18I GGWCC 3 cut(s) 208, 474, 690
BmeT110I CYCGRG 2 cut(s) 1023, 1129
BmgBI CACGTC 2 cut(s) 1013, 1052
BmgT120I GGNCC 6 cut(s) 208, 474, 690, 1021, 1126, 1127
BmiI GGNNCC 4 cut(s) 99, 209, 988, 1128
BmrFI CCNGG 4 cut(s) 188, 688, 1024, 1025
BmsI GCATC 1 cut(s) 1125
BoxI GACNNNNGTC 2 cut(s) 336, 824
BpmI CTGGAG 1 cut(s) 817
Bpu10I CCTNAGC 1 cut(s) 93
BpuMI CCSGG 4 cut(s) 188, 688, 1024, 1025
Bsa29I ATCGAT 1 cut(s) 262
BsaJI CCNNGG 5 cut(s) 186, 1023, 1024, 1130, 1161
BsaWI WCCGGW 1 cut(s) 471
BsaXI ACNNNNNCTCC 4 cut(s) 308, 338, 453, 483
Bsc4I CCNNNNNNNGG 4 cut(s) 140, 192, 730, 1079
Bse1I ACTGG 2 cut(s) 322, 800
BseCI ATCGAT 1 cut(s) 262
BseDI CCNNGG 5 cut(s) 186, 1023, 1024, 1130, 1161
BseGI GGATG 4 cut(s) 664, 892, 1004, 1140
BseLI CCNNNNNNNGG 4 cut(s) 140, 192, 730, 1079
BseMII CTCAG 2 cut(s) 107, 941
BseNI ACTGG 2 cut(s) 322, 800
BseSI GKGCMC 1 cut(s) 1130
BseXI GCAGC 1 cut(s) 1070
BshFI GGCC 3 cut(s) 1022, 1056, 1128
BshNI GGYRCC 1 cut(s) 97
BshVI ATCGAT 1 cut(s) 262
BsiHKCI CYCGRG 2 cut(s) 1023, 1129
BsiSI CCGG 5 cut(s) 188, 472, 688, 1024, 1139
BslFI GGGAC 3 cut(s) 221, 1023, 1159
BslI CCNNNNNNNGG 4 cut(s) 140, 192, 730, 1079
BsmAI GTCTC 2 cut(s) 567, 737
BsmFI GGGAC 3 cut(s) 221, 1023, 1159
BsmI GAATGC 1 cut(s) 970
BsnI GGCC 3 cut(s) 1022, 1056, 1128
BsoBI CYCGRG 2 cut(s) 1023, 1129
Bsp120I GGGCCC 1 cut(s) 1126
Bsp1286I GDGCHC 1 cut(s) 1130
Bsp143I GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
Bsp19I CCATGG 1 cut(s) 1161
BspACI CCGC 2 cut(s) 767, 1073
BspANI GGCC 3 cut(s) 1022, 1056, 1128
BspCNI CTCAG 2 cut(s) 106, 940
BspDI ATCGAT 1 cut(s) 262
BspLI GGNNCC 4 cut(s) 99, 209, 988, 1128
BspMAI CTGCAG 1 cut(s) 916
BspPI GGATC 4 cut(s) 258, 374, 981, 994
BspT107I GGYRCC 1 cut(s) 97
BsrI ACTGG 2 cut(s) 322, 800
BssECI CCNNGG 5 cut(s) 186, 1023, 1024, 1130, 1161
BssMI GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
BssSI CACGAG 1 cut(s) 1189
BssT1I CCWWGG 1 cut(s) 1161
Bst2BI CACGAG 1 cut(s) 1189
Bst4CI ACNGT 2 cut(s) 571, 1095
Bst6I CTCTTC 2 cut(s) 484, 1162
BstC8I GCNNGC 4 cut(s) 459, 836, 1039, 1175
BstDEI CTNAG 2 cut(s) 93, 927
BstDSI CCRYGG 1 cut(s) 1161
BstF5I GGATG 4 cut(s) 664, 892, 1004, 1140
BstHHI GCGC 2 cut(s) 730, 1088
BstKTI GATC 7 cut(s) 119, 234, 266, 382, 598, 946, 989
BstMAI GTCTC 2 cut(s) 567, 737
BstMBI GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
BstMWI GCNNNNNNNGC 2 cut(s) 727, 764
BstPAI GACNNNNGTC 2 cut(s) 336, 824
BstSCI CCNGG 4 cut(s) 186, 686, 1022, 1023
BstSFI CTRYAG 1 cut(s) 912
BstSLI GKGCMC 1 cut(s) 1130
BstV1I GCAGC 1 cut(s) 1070
BstX2I RGATCY 2 cut(s) 379, 986
BstYI RGATCY 2 cut(s) 379, 986
Bsu15I ATCGAT 1 cut(s) 262
BsuRI GGCC 3 cut(s) 1022, 1056, 1128
BsuTUI ATCGAT 1 cut(s) 262
BtgI CCRYGG 1 cut(s) 1161
BtrI CACGTC 2 cut(s) 1013, 1052
BtsCI GGATG 4 cut(s) 664, 892, 1004, 1140
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 4 cut(s) 177, 334, 534, 1100
Cac8I GCNNGC 4 cut(s) 459, 836, 1039, 1175
CfoI GCGC 2 cut(s) 730, 1088
Cfr13I GGNCC 6 cut(s) 208, 474, 690, 1021, 1126, 1127
Cfr9I CCCGGG 1 cut(s) 1023
ClaI ATCGAT 1 cut(s) 262
CseI GACGC 1 cut(s) 840
Csp6I GTAC 4 cut(s) 275, 319, 567, 739
CspCI CAANNNNNGTGG 1 cut(s) 35
CviAII CATG 6 cut(s) 46, 334, 370, 725, 1005, 1162
CviQI GTAC 4 cut(s) 275, 319, 567, 739
DdeI CTNAG 2 cut(s) 93, 927
DpnI GATC 7 cut(s) 118, 233, 265, 381, 597, 945, 988
DpnII GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
Eam1104I CTCTTC 2 cut(s) 484, 1162
EarI CTCTTC 2 cut(s) 484, 1162
Eco130I CCWWGG 1 cut(s) 1161
Eco24I GRGCYC 1 cut(s) 1130
Eco32I GATATC 1 cut(s) 402
Eco47I GGWCC 3 cut(s) 208, 474, 690
Eco57I CTGAAG 3 cut(s) 275, 405, 990
Eco88I CYCGRG 2 cut(s) 1023, 1129
EcoO109I RGGNCCY 1 cut(s) 1126
EcoRI GAATTC 1 cut(s) 869
EcoRV GATATC 1 cut(s) 402
EcoT14I CCWWGG 1 cut(s) 1161
EcoT38I GRGCYC 1 cut(s) 1130
ErhI CCWWGG 1 cut(s) 1161
FaeI CATG 6 cut(s) 49, 337, 373, 728, 1008, 1165
FaqI GGGAC 3 cut(s) 221, 1023, 1159
FatI CATG 6 cut(s) 45, 333, 369, 724, 1004, 1161
FauNDI CATATG 1 cut(s) 453
Fnu4HI GCNGC 1 cut(s) 1084
FokI GGATG 4 cut(s) 651, 899, 1011, 1147
FriOI GRGCYC 1 cut(s) 1130
Fsp4HI GCNGC 1 cut(s) 1084
FspBI CTAG 2 cut(s) 614, 1149
GlaI GCGC 2 cut(s) 729, 1087
GluI GCNGC 1 cut(s) 1084
GsuI CTGGAG 1 cut(s) 817
HaeIII GGCC 3 cut(s) 1022, 1056, 1128
HapII CCGG 5 cut(s) 188, 472, 688, 1024, 1139
HgaI GACGC 1 cut(s) 840
HhaI GCGC 2 cut(s) 730, 1088
Hin1II CATG 6 cut(s) 49, 337, 373, 728, 1008, 1165
Hin6I GCGC 2 cut(s) 728, 1086
HinP1I GCGC 2 cut(s) 728, 1086
HindIII AAGCTT 1 cut(s) 485
HinfI GANTC 6 cut(s) 35, 337, 353, 674, 807, 908
HpaII CCGG 5 cut(s) 188, 472, 688, 1024, 1139
HphI GGTGA 3 cut(s) 185, 710, 1150
Hpy166II GTNNAC 1 cut(s) 1049
Hpy188I TCNGA 6 cut(s) 43, 399, 656, 812, 830, 868
Hpy188III TCNNGA 1 cut(s) 383
Hpy8I GTNNAC 1 cut(s) 1049
HpyAV CCTTC 4 cut(s) 88, 380, 505, 1012
HpyCH4III ACNGT 2 cut(s) 571, 1095
HpyCH4IV ACGT 3 cut(s) 520, 1012, 1051
HpyCH4V TGCA 4 cut(s) 461, 559, 914, 1037
HpyF10VI GCNNNNNNNGC 2 cut(s) 727, 764
HpyF3I CTNAG 2 cut(s) 93, 927
HpySE526I ACGT 3 cut(s) 520, 1012, 1051
Hsp92II CATG 6 cut(s) 49, 337, 373, 728, 1008, 1165
HspAI GCGC 2 cut(s) 728, 1086
Kzo9I GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
LmnI GCTCC 2 cut(s) 726, 1069
Lsp1109I GCAGC 1 cut(s) 1070
LweI GCATC 1 cut(s) 1125
MaeI CTAG 2 cut(s) 614, 1149
MaeII ACGT 3 cut(s) 520, 1012, 1051
MaeIII GTNAC 4 cut(s) 173, 329, 432, 443
MalI GATC 7 cut(s) 118, 233, 265, 381, 597, 945, 988
MboI GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
MboII GAAGA 9 cut(s) 471, 563, 605, 631, 675, 865, 929, 983, 1179
MflI RGATCY 2 cut(s) 379, 986
MhlI GDGCHC 1 cut(s) 1130
MluCI AATT 7 cut(s) 83, 104, 554, 657, 679, 869, 976
MlyI GAGTC 2 cut(s) 346, 801
MnlI CCTC 8 cut(s) 49, 231, 487, 783, 877, 1114, 1125, 1163
MroXI GAANNNNTTC 1 cut(s) 108
MseI TTAA 3 cut(s) 516, 1181, 1201
MslI CAYNNNNRTG 1 cut(s) 50
MspI CCGG 5 cut(s) 188, 472, 688, 1024, 1139
MspR9I CCNGG 4 cut(s) 188, 688, 1024, 1025
Mva1269I GAATGC 1 cut(s) 970
MwoI GCNNNNNNNGC 2 cut(s) 727, 764
NciI CCSGG 4 cut(s) 188, 688, 1024, 1025
NcoI CCATGG 1 cut(s) 1161
NdeI CATATG 1 cut(s) 453
NdeII GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
NlaIII CATG 6 cut(s) 49, 337, 373, 728, 1008, 1165
NlaIV GGNNCC 4 cut(s) 99, 209, 988, 1128
NmuCI GTSAC 3 cut(s) 173, 329, 432
PctI GAATGC 1 cut(s) 970
PdmI GAANNNNTTC 1 cut(s) 108
PfeI GAWTC 4 cut(s) 35, 353, 674, 908
PflMI CCANNNNNTGG 1 cut(s) 730
PkrI GCNGC 1 cut(s) 1085
PleI GAGTC 2 cut(s) 345, 801
PpsI GAGTC 2 cut(s) 345, 801
PshAI GACNNNNGTC 2 cut(s) 336, 824
PspN4I GGNNCC 4 cut(s) 99, 209, 988, 1128
PspOMI GGGCCC 1 cut(s) 1126
PspPI GGNCC 6 cut(s) 208, 474, 690, 1021, 1126, 1127
PstI CTGCAG 1 cut(s) 916
PsuI RGATCY 2 cut(s) 379, 986
RsaI GTAC 4 cut(s) 276, 320, 568, 740
RsaNI GTAC 4 cut(s) 275, 319, 567, 739
RseI CAYNNNNRTG 1 cut(s) 50
SaqAI TTAA 3 cut(s) 516, 1181, 1201
SatI GCNGC 1 cut(s) 1084
Sau3AI GATC 7 cut(s) 116, 231, 263, 379, 595, 943, 986
Sau96I GGNCC 6 cut(s) 208, 474, 690, 1021, 1126, 1127
SchI GAGTC 2 cut(s) 346, 801
ScrFI CCNGG 4 cut(s) 188, 688, 1024, 1025
SduI GDGCHC 1 cut(s) 1130
SfaNI GCATC 1 cut(s) 1125
SfcI CTRYAG 1 cut(s) 912
SinI GGWCC 3 cut(s) 208, 474, 690
SmaI CCCGGG 1 cut(s) 1025
SmiMI CAYNNNNRTG 1 cut(s) 50
Sse9I AATT 7 cut(s) 83, 104, 554, 657, 679, 869, 976
SsiI CCGC 2 cut(s) 767, 1073
SspI AATATT 1 cut(s) 247
SspMI CTAG 2 cut(s) 614, 1149
StyD4I CCNGG 4 cut(s) 186, 686, 1022, 1023
StyI CCWWGG 1 cut(s) 1161
TaaI ACNGT 2 cut(s) 571, 1095
TaiI ACGT 3 cut(s) 523, 1015, 1054
TaqI TCGA 2 cut(s) 262, 873
TasI AATT 7 cut(s) 83, 104, 554, 657, 679, 869, 976
TatI WGTACW 1 cut(s) 274
TfiI GAWTC 4 cut(s) 35, 353, 674, 908
Tru1I TTAA 3 cut(s) 516, 1181, 1201
Tru9I TTAA 3 cut(s) 516, 1181, 1201
TscAI CASTG 4 cut(s) 184, 334, 541, 1100
TseFI GTSAC 3 cut(s) 173, 329, 432
TseI GCWGC 1 cut(s) 1083
Tsp45I GTSAC 3 cut(s) 173, 329, 432
TspDTI ATGAA 5 cut(s) 366, 443, 694, 921, 977
TspMI CCCGGG 1 cut(s) 1023
TspRI CASTG 4 cut(s) 184, 334, 541, 1100
Van91I CCANNNNNTGG 1 cut(s) 730
VpaK11BI GGWCC 3 cut(s) 208, 474, 690
XapI RAATTY 5 cut(s) 83, 104, 657, 869, 976
XcmI CCANNNNNNNNNTGG 1 cut(s) 1049
XmaI CCCGGG 1 cut(s) 1023
XmnI GAANNNNTTC 1 cut(s) 108
XspI CTAG 2 cut(s) 614, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.