Rh5CG190800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000040
Physical Location & Seq
Reverse (-)
19008236 .. 19033889
25654 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG190800.1

Sequence Viewer

Length: 945 bp
ATGACGATATGCGAGGATTCAAGACTTCAAATGAGTGATTATAACTTGCAATTCATAGGCAATGTATCTGAAGTCAATGATAGCCAAGATGTAGGCCAACACACACAAAATGATGATAAAGGTGAAGAAATTCTTATGAGGATGATTAGGGGAGATTATAACATGACACCAAACCATGCTGATTGCGCGGTGAATGAGATGAATGCATCTAGAGGATCTGTTAATAGAAATATCGGAGATATGAGATCAAAAACTGGACATGGGACCAGGAAGAGGGCTGGAAAAATCAAGAAAAAGAGGGGTAAAAATAAGGTTAACTTTGCTCCTTATGGCCCTGAGAAGATGCTGTTTAACAAGTTTGGGCAGCCGGTTGCACTAGCTGAAACTGTTGCAAGGTTCTCAAGTGAAATAATGAAGCGCGGTGCTAAATCATCTCGCCGTCTATATTATGATGATGCATCGAATGAGAGAAATCAATGTGAACACTCTCCTGCAAACTCGTCCAGTGCGGCCCTTCCTGATCCGCCACACATCGATGCACGAGATATGTTAAGAATCTTAGTCCCCACACTACCAACATCACAAGAGCGTATCCAACAAGCTATCGATGTTGCTCGTAGACAACATGCAAGGCCTCGACCAAATGACGGTGTGTTTCAATTTGGAACGCCACCGCGTGCGGCTTCAAATATTCCACGCACCGGCCCTCATTTAACTCCATCTGCATGCCTACAACCGAAAACGGATTCAAATAGTGGTGAAACTGAGATTATTAGTACTGCTCATTATCATGGAGATCAATATGCTGAAAGTGAGGGAGAAGTCTGTAGCATGACATCTAAGAAGGTTGGAACTACAATCAATGAAGGTAAGGTTAAAGAAGAAGTTAGTGAAAGAGATCGGTATGAAGAAGATGGTTGGTCGTGGTGGACACATGTAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

314

Amino Acids

35.18

Weight (kDa)

8.21

Isoelectric Point (pI)

53.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000040)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00150 FvH4_2g13531 FvH4_2g21543 FvH4_3g32800 FvH4_3g32802 FvH4_4g00091 FvH4_4g00092 FvH4_5g22070 FvH4_5g31391 FvH4_6g11351 FvH4_6g23430 FvH4_6g23672 FvH4_6g52753
malus_domestica MD03G1101500.v1.1 MD08G1234800.v1.1
pyrus_communis pycom07g24860 pycom09g07860 pycom10g09330 pycom10g15360 pycom11g01600 pycom11g13460 pycom13g15580
rosa_chinensis RchiOBHm_Chr1g0332021 RchiOBHm_Chr2g0095801 RchiOBHm_Chr2g0111771 RchiOBHm_Chr2g0127541 RchiOBHm_Chr2g0136581 RchiOBHm_Chr2g0136591 RchiOBHm_Chr2g0143311 RchiOBHm_Chr2g0145131 RchiOBHm_Chr2g0151391 RchiOBHm_Chr3g0468771 RchiOBHm_Chr3g0473281 RchiOBHm_Chr3g0481961 RchiOBHm_Chr4g0393741 RchiOBHm_Chr4g0397391 RchiOBHm_Chr4g0435991 RchiOBHm_Chr5g0015951 RchiOBHm_Chr5g0016651 RchiOBHm_Chr5g0039191 RchiOBHm_Chr5g0039211 RchiOBHm_Chr6g0254441 RchiOBHm_Chr6g0260911 RchiOBHm_Chr6g0274501 RchiOBHm_Chr6g0274511 RchiOBHm_Chr7g0184951 RchiOBHm_Chr7g0201701 RchiOBHm_Chr7g0201721 RchiOBHm_Chr7g0201731 RchiOBHm_Chr7g0234921 RchiOBHm_Chr7g0237841
rosa_laevigata RLG00000001204 RLG00000001230 RLG00000001341 RLG00000001513 RLG00000001971 RLG00000002177 RLG00000002360 RLG00000003112 RLG00000003130 RLG00000003854 RLG00000008209 RLG00000008322 RLG00000008412 RLG00000008524 RLG00000009491 RLG00000009908 RLG00000011823 RLG00000013252 RLG00000013782 RLG00000013944 RLG00000014480 RLG00000019084 RLG00000019544 RLG00000019751 RLG00000020093 RLG00000020094 RLG00000020551 RLG00000020838 RLG00000020982 RLG00000021059 RLG00000022067 RLG00000022604 RLG00000022632 RLG00000022849 RLG00000023962 RLG00000025767 RLG00000026838 RLG00000027291 RLG00000028131 RLG00000028210 RLG00000028834 RLG00000030169 RLG00000031271 RLG00000032327 RLG00000033996 RLG00000034546 RLG00000034654 RLG00000034810 RLG00000035087 RLG00000036782
rosa_multiflora Rmu_co8330487.1_g000001 Rmu_co8359977.1_g000001 Rmu_co8445341.1_g000001 Rmu_sc0000141.1_g000003 Rmu_sc0000353.1_g000018 Rmu_sc0000740.1_g000017 Rmu_sc0000744.1_g000138 Rmu_sc0000813.1_g000014 Rmu_sc0000908.1_g000003 Rmu_sc0000999.1_g000014 Rmu_sc0001103.1_g000001 Rmu_sc0001248.1_g000013 Rmu_sc0001282.1_g000021 Rmu_sc0001293.1_g000018 Rmu_sc0001608.1_g000015 Rmu_sc0001616.1_g000060 Rmu_sc0001851.1_g000013 Rmu_sc0001990.1_g000003 Rmu_sc0002138.1_g000002 Rmu_sc0002200.1_g000021 Rmu_sc0002230.1_g000029 Rmu_sc0002230.1_g000030 Rmu_sc0002702.1_g000017 Rmu_sc0002806.1_g000010 Rmu_sc0002809.1_g000023 Rmu_sc0002869.1_g000005 Rmu_sc0003156.1_g000027 Rmu_sc0003368.1_g000018 Rmu_sc0003642.1_g000007 Rmu_sc0003653.1_g000004 Rmu_sc0003791.1_g000008 Rmu_sc0003804.1_g000013 Rmu_sc0004015.1_g000022 Rmu_sc0004230.1_g000017 Rmu_sc0004368.1_g000011 Rmu_sc0004529.1_g000011 Rmu_sc0004540.1_g000011 Rmu_sc0005008.1_g000014 Rmu_sc0005171.1_g000001 Rmu_sc0005212.1_g000013 Rmu_sc0005947.1_g000003 Rmu_sc0006317.1_g000026 Rmu_sc0006578.1_g000005 Rmu_sc0006993.1_g000001 Rmu_sc0007442.1_g000002 Rmu_sc0007442.1_g000004 Rmu_sc0007876.1_g000004 Rmu_sc0007876.1_g000005 Rmu_sc0009624.1_g000004 Rmu_sc0009742.1_g000005 Rmu_sc0010306.1_g000007 Rmu_sc0011745.1_g000008 Rmu_sc0011800.1_g000003 Rmu_sc0012369.1_g000003 Rmu_sc0012787.1_g000003 Rmu_sc0012989.1_g000001 Rmu_sc0013416.1_g000003 Rmu_sc0021155.1_g000001 Rmu_sc0022372.1_g000001 Rmu_sc0023106.1_g000001 Rmu_sc0023684.1_g000003 Rmu_sc0023684.1_g000004 Rmu_sc0026897.1_g000001 Rmu_sc0027278.1_g000001 Rmu_sc0028533.1_g000001 Rmu_sc0028533.1_g000003 Rmu_sc0038440.1_g000001
rosa_roxburghii Rroxscaffold_1G00031730 Rroxscaffold_1G00033690 Rroxscaffold_1G00073100 Rroxscaffold_2G00079640 Rroxscaffold_2G00089760 Rroxscaffold_2G00091520 Rroxscaffold_2G00112420 Rroxscaffold_2G00115720 Rroxscaffold_2G00116170 Rroxscaffold_2G00116180 Rroxscaffold_2G00152590 Rroxscaffold_2G00155940 Rroxscaffold_3G00220010 Rroxscaffold_3G00234940 Rroxscaffold_3G00235250 Rroxscaffold_3G00237510 Rroxscaffold_3G00250950 Rroxscaffold_3G00250960 Rroxscaffold_3G00262030 Rroxscaffold_4G00299560 Rroxscaffold_4G00306000 Rroxscaffold_4G00311350 Rroxscaffold_4G00318530 Rroxscaffold_4G00329140 Rroxscaffold_5G00342020 Rroxscaffold_5G00350770 Rroxscaffold_5G00354620 Rroxscaffold_5G00354630 Rroxscaffold_5G00361180 Rroxscaffold_5G00377270 Rroxscaffold_6G00397870 Rroxscaffold_6G00397960 Rroxscaffold_6G00407290 Rroxscaffold_6G00408690 Rroxscaffold_6G00421900 Rroxscaffold_6G00421910 Rroxscaffold_7G00181630 Rroxscaffold_7G00182330 Rroxscaffold_7G00182340 Rroxscaffold_7G00212590 Rroxscaffold_7G00214060 Rroxscaffold_7G00214070 Rroxscaffold_7G00215940
rosa_rugosa Rorug01G0052800 Rorug01G0052800 Rorug01G0075200 Rorug01G0090500 Rorug01G0091500 Rorug01G0106000 Rorug01G0309300 Rorug01G0309400.1 Rorug02G0092000 Rorug02G0128200 Rorug02G0152800 Rorug02G0366100 Rorug02G0401500 Rorug02G0465600 Rorug02G0474400 Rorug03G0322500 Rorug04G0044000 Rorug04G0044100 Rorug04G0064800.1 Rorug04G0077400 Rorug04G0094800 Rorug04G0094800 Rorug04G0111400 Rorug04G0137800 Rorug04G0137900 Rorug04G0138000 Rorug04G0138000 Rorug04G0446200 Rorug05G0090600 Rorug05G0239900 Rorug05G0284400 Rorug05G0534400 Rorug05G0561600 Rorug06G0098100 Rorug06G0098100 Rorug06G0134500 Rorug06G0238500 Rorug06G0238600 Rorug07G0228900 Rorug07G0229000 Rorug07G0291600 Rorug07G0291700
rosa_samantha Rh1AG082200 Rh1AG129200 Rh1AG131500 Rh1AG159900 Rh1AG330800 Rh1AG408400 Rh1BG089600 Rh1CG086000 Rh1CG149200 Rh1CG405600 Rh1DG008200 Rh1DG015800 Rh1DG068000 Rh1DG118400 Rh1DG122500 Rh1DG202400 Rh1DG202500 Rh1DG266300 Rh1DG266400 Rh1DG287400 Rh1DG314700 Rh1DG314800 Rh2AG128400 Rh2AG128500 Rh2AG291000 Rh2AG347900 Rh2AG350700 Rh2AG415100 Rh2AG417200 Rh2AG497700 Rh2AG505000 Rh2AG507600 Rh2BG131300 Rh2BG233900 Rh2BG291700 Rh2BG291800 Rh2BG302700 Rh2BG302800 Rh2BG334700 Rh2BG334900 Rh2BG347000 Rh2BG347800 Rh2BG357100 Rh2BG528200 Rh2BG528300 Rh2BG603700 Rh2CG032300 Rh2CG034300 Rh2CG232600 Rh2CG483700 Rh2DG077400 Rh2DG103100 Rh2DG103200 Rh2DG287000 Rh2DG287200 Rh2DG375000 Rh2DG382700 Rh2DG537400 Rh2DG602900 Rh2DG603000 Rh3AG080800 Rh3AG217300 Rh3AG321800 Rh3BG082700 Rh3BG082800 Rh3BG168600 Rh3BG185900 Rh3BG224400 Rh3BG250500 Rh3BG260700 Rh3BG351300 Rh3BG353600 Rh3BG353700 Rh3CG082900 Rh3CG083000 Rh3CG176200 Rh3CG176300 Rh3CG219400 Rh3CG219500 Rh3CG254600 Rh3CG254700 Rh3CG256000 Rh3CG256100 Rh3CG257400 Rh3CG356200 Rh3CG356300 Rh3DG084300 Rh4AG030500 Rh4BG132300 Rh4BG139800 Rh4BG140000 Rh4CG027200 Rh4CG033100 Rh4CG033200 Rh4CG069600 Rh4CG103300 Rh4CG322600 Rh4DG028500 Rh4DG081000 Rh4DG190200 Rh4DG193500 Rh4DG212900 Rh4DG303900 Rh4DG342900 Rh5AG131000 Rh5AG166800 Rh5AG167000 Rh5AG201600 Rh5AG372200 Rh5AG372300 Rh5AG417900 Rh5BG082500 Rh5BG171200 Rh5BG171300 Rh5BG180300 Rh5BG194400 Rh5BG302800 Rh5BG343300 Rh5BG402700 Rh5BG428500 Rh5CG190700 Rh5CG190800 Rh5CG219100 Rh5CG451900 Rh5DG175200 Rh5DG175400 Rh5DG177000 Rh5DG177100 Rh5DG356000 Rh5DG356100 Rh5DG493500 Rh6AG006700 Rh6AG051700 Rh6AG064100 Rh6AG064200 Rh6AG064500 Rh6AG092800 Rh6AG152000 Rh6AG152100 Rh6AG291900 Rh6AG419000 Rh6AG465900 Rh6AG466000 Rh6BG125000 Rh6BG160600 Rh6BG161800 Rh6BG359100 Rh6BG359200 Rh6CG071400 Rh6CG071500 Rh6CG103500 Rh6CG103600 Rh6CG117200 Rh6CG123700 Rh6CG123800 Rh6CG156600 Rh6CG192500 Rh6CG208600 Rh6CG208700 Rh6CG365200 Rh6DG146200 Rh6DG146800 Rh6DG193200 Rh6DG193300 Rh6DG193400 Rh6DG349200 Rh7AG251100 Rh7AG259300 Rh7AG425100 Rh7BG262700 Rh7BG262900 Rh7BG369500 Rh7CG107400 Rh7CG107500 Rh7CG257400 Rh7CG267300 Rh7DG070500 Rh7DG105000 Rh7DG198500 Rh7DG291300 Rh7DG480600
rosa_wichuraiana Rw2G027920 Rw3G014750 Rw3G021490 Rw4G001910 Rw6G013120 Rw6G020040 Rw6G022930 Rw6G041900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 42, 159
AccI GTMKAC 1 cut(s) 619
AccII CGCG 3 cut(s) 188, 420, 676
AciI CCGC 6 cut(s) 188, 420, 509, 524, 674, 680
AclWI GGATC 2 cut(s) 223, 515
AcsI RAATTY 1 cut(s) 129
AcuI CTGAAG 1 cut(s) 90
AdeI CACNNNGTG 1 cut(s) 677
AfaI GTAC 1 cut(s) 778
AfiI CCNNNNNNNGG 3 cut(s) 273, 647, 701
AflIII ACRYGT 1 cut(s) 934
AgsI TTSAA 5 cut(s) 21, 29, 659, 687, 750
AjnI CCWGG 1 cut(s) 266
AluBI AGCT 2 cut(s) 380, 602
AluI AGCT 2 cut(s) 380, 602
AlwI GGATC 2 cut(s) 223, 515
AoxI GGCC 5 cut(s) 94, 331, 510, 632, 703
ApeKI GCWGC 1 cut(s) 364
ApoI RAATTY 1 cut(s) 129
Asp700I GAANNNNTTC 1 cut(s) 129
AspLEI GCGC 2 cut(s) 188, 420
AspS9I GGNCC 4 cut(s) 264, 332, 511, 704
AsuHPI GGTGA 3 cut(s) 134, 202, 770
AvaII GGWCC 1 cut(s) 264
BauI CACGAG 1 cut(s) 540
BbvI GCAGC 1 cut(s) 376
BccI CCATC 2 cut(s) 727, 908
BceAI ACGGC 1 cut(s) 423
BciT130I CCWGG 1 cut(s) 268
BciVI GTATCC 1 cut(s) 602
BfaI CTAG 2 cut(s) 210, 377
BfmI CTRYAG 1 cut(s) 826
BfuI GTATCC 1 cut(s) 602
BisI GCNGC 3 cut(s) 365, 510, 681
BlsI GCNGC 3 cut(s) 366, 511, 682
BmcAI AGTACT 1 cut(s) 778
Bme1390I CCNGG 1 cut(s) 268
Bme18I GGWCC 1 cut(s) 264
BmgT120I GGNCC 4 cut(s) 264, 332, 511, 704
BmiI GGNNCC 1 cut(s) 265
BmrFI CCNGG 1 cut(s) 268
BmsI GCATC 5 cut(s) 215, 333, 445, 467, 526
BpuEI CTTGAG 1 cut(s) 385
Bsa29I ATCGAT 2 cut(s) 534, 606
Bsc4I CCNNNNNNNGG 3 cut(s) 273, 647, 701
Bse118I RCCGGY 2 cut(s) 367, 701
Bse1I ACTGG 2 cut(s) 259, 504
Bse3DI GCAATG 1 cut(s) 67
BseBI CCWGG 1 cut(s) 268
BseCI ATCGAT 2 cut(s) 534, 606
BseGI GGATG 1 cut(s) 147
BseLI CCNNNNNNNGG 3 cut(s) 273, 647, 701
BseMI GCAATG 1 cut(s) 67
BseMII CTCAG 2 cut(s) 327, 756
BseNI ACTGG 2 cut(s) 259, 504
BseXI GCAGC 1 cut(s) 376
Bsh1236I CGCG 3 cut(s) 188, 420, 676
BshFI GGCC 5 cut(s) 96, 333, 512, 634, 705
BshVI ATCGAT 2 cut(s) 534, 606
BsiSI CCGG 2 cut(s) 368, 702
BslFI GGGAC 2 cut(s) 277, 548
BslI CCNNNNNNNGG 3 cut(s) 273, 647, 701
BsmFI GGGAC 2 cut(s) 277, 548
BsmI GAATGC 1 cut(s) 208
BsnI GGCC 5 cut(s) 96, 333, 512, 634, 705
Bsp143I GATC 5 cut(s) 215, 245, 520, 796, 898
BspACI CCGC 6 cut(s) 188, 420, 509, 524, 674, 680
BspANI GGCC 5 cut(s) 96, 333, 512, 634, 705
BspCNI CTCAG 2 cut(s) 328, 757
BspDI ATCGAT 2 cut(s) 534, 606
BspFNI CGCG 3 cut(s) 188, 420, 676
BspLI GGNNCC 1 cut(s) 265
BspPI GGATC 2 cut(s) 223, 515
BsrDI GCAATG 1 cut(s) 67
BsrFI RCCGGY 2 cut(s) 367, 701
BsrI ACTGG 2 cut(s) 259, 504
BssAI RCCGGY 2 cut(s) 367, 701
BssMI GATC 5 cut(s) 215, 245, 520, 796, 898
BssSI CACGAG 1 cut(s) 540
Bst2BI CACGAG 1 cut(s) 540
Bst2UI CCWGG 1 cut(s) 268
Bst4CI ACNGT 2 cut(s) 388, 650
Bst6I CTCTTC 1 cut(s) 266
BstC8I GCNNGC 2 cut(s) 678, 727
BstDEI CTNAG 4 cut(s) 336, 559, 765, 840
BstF5I GGATG 1 cut(s) 147
BstFNI CGCG 3 cut(s) 188, 420, 676
BstHHI GCGC 2 cut(s) 188, 420
BstKTI GATC 5 cut(s) 218, 248, 523, 799, 901
BstMBI GATC 5 cut(s) 215, 245, 520, 796, 898
BstMWI GCNNNNNNNGC 1 cut(s) 185
BstNI CCWGG 1 cut(s) 268
BstNSI RCATGY 3 cut(s) 629, 729, 938
BstSCI CCNGG 1 cut(s) 266
BstSFI CTRYAG 1 cut(s) 826
BstUI CGCG 3 cut(s) 188, 420, 676
BstV1I GCAGC 1 cut(s) 376
BstX2I RGATCY 1 cut(s) 215
BstYI RGATCY 1 cut(s) 215
Bsu15I ATCGAT 2 cut(s) 534, 606
BsuI GTATCC 1 cut(s) 602
BsuRI GGCC 5 cut(s) 96, 333, 512, 634, 705
BsuTUI ATCGAT 2 cut(s) 534, 606
BtsCI GGATG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 511
Cac8I GCNNGC 2 cut(s) 678, 727
CfoI GCGC 2 cut(s) 188, 420
Cfr10I RCCGGY 2 cut(s) 367, 701
Cfr13I GGNCC 4 cut(s) 264, 332, 511, 704
ClaI ATCGAT 2 cut(s) 534, 606
Csp6I GTAC 1 cut(s) 777
CviAII CATG 8 cut(s) 163, 176, 260, 626, 726, 791, 832, 935
CviQI GTAC 1 cut(s) 777
DdeI CTNAG 4 cut(s) 336, 559, 765, 840
DpnI GATC 5 cut(s) 217, 247, 522, 798, 900
DpnII GATC 5 cut(s) 215, 245, 520, 796, 898
DraIII CACNNNGTG 1 cut(s) 677
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
EciI GGCGGA 1 cut(s) 513
Eco147I AGGCCT 1 cut(s) 634
Eco47I GGWCC 1 cut(s) 264
Eco57I CTGAAG 1 cut(s) 90
EcoRII CCWGG 1 cut(s) 266
EcoT22I ATGCAT 2 cut(s) 208, 460
FaeI CATG 8 cut(s) 166, 179, 263, 629, 729, 794, 835, 938
FalI AAGNNNNNCTT 4 cut(s) 117, 149, 302, 334
FaqI GGGAC 2 cut(s) 277, 548
FatI CATG 8 cut(s) 162, 175, 259, 625, 725, 790, 831, 934
FblI GTMKAC 1 cut(s) 619
Fnu4HI GCNGC 3 cut(s) 365, 510, 681
FokI GGATG 1 cut(s) 154
Fsp4HI GCNGC 3 cut(s) 365, 510, 681
FspBI CTAG 2 cut(s) 210, 377
GlaI GCGC 2 cut(s) 187, 419
GluI GCNGC 3 cut(s) 365, 510, 681
HaeIII GGCC 5 cut(s) 96, 333, 512, 634, 705
HapII CCGG 2 cut(s) 368, 702
HhaI GCGC 2 cut(s) 188, 420
Hin1II CATG 8 cut(s) 166, 179, 263, 629, 729, 794, 835, 938
Hin6I GCGC 2 cut(s) 186, 418
HinP1I GCGC 2 cut(s) 186, 418
HincII GTYRAC 1 cut(s) 316
HindII GTYRAC 1 cut(s) 316
HinfI GANTC 3 cut(s) 17, 555, 746
HpaI GTTAAC 1 cut(s) 316
HpaII CCGG 2 cut(s) 368, 702
HphI GGTGA 3 cut(s) 134, 202, 770
Hpy166II GTNNAC 4 cut(s) 316, 482, 620, 930
Hpy188I TCNGA 2 cut(s) 70, 236
Hpy188III TCNNGA 4 cut(s) 21, 210, 289, 518
Hpy8I GTNNAC 4 cut(s) 316, 482, 620, 930
HpyAV CCTTC 3 cut(s) 524, 838, 860
HpyCH4III ACNGT 2 cut(s) 388, 650
HpyCH4V TGCA 9 cut(s) 49, 206, 374, 392, 458, 494, 539, 629, 725
HpyF10VI GCNNNNNNNGC 1 cut(s) 185
HpyF3I CTNAG 4 cut(s) 336, 559, 765, 840
Hsp92II CATG 8 cut(s) 166, 179, 263, 629, 729, 794, 835, 938
HspAI GCGC 2 cut(s) 186, 418
KspAI GTTAAC 1 cut(s) 316
Kzo9I GATC 5 cut(s) 215, 245, 520, 796, 898
LmnI GCTCC 1 cut(s) 328
Lsp1109I GCAGC 1 cut(s) 376
LweI GCATC 5 cut(s) 215, 333, 445, 467, 526
MaeI CTAG 2 cut(s) 210, 377
MalI GATC 5 cut(s) 217, 247, 522, 798, 900
MboI GATC 5 cut(s) 215, 245, 520, 796, 898
MboII GAAGA 6 cut(s) 137, 283, 352, 893, 920, 923
MflI RGATCY 1 cut(s) 215
MluCI AATT 3 cut(s) 50, 129, 659
MmeI TCCRAC 2 cut(s) 619, 829
MnlI CCTC 8 cut(s) 7, 132, 206, 267, 291, 645, 717, 808
Mph1103I ATGCAT 2 cut(s) 208, 460
MroXI GAANNNNTTC 1 cut(s) 129
MseI TTAA 6 cut(s) 222, 315, 351, 551, 713, 876
MslI CAYNNNNRTG 3 cut(s) 534, 724, 789
MspI CCGG 2 cut(s) 368, 702
MspR9I CCNGG 1 cut(s) 268
Mva1269I GAATGC 1 cut(s) 208
MvaI CCWGG 1 cut(s) 268
MvnI CGCG 3 cut(s) 188, 420, 676
MwoI GCNNNNNNNGC 1 cut(s) 185
NdeII GATC 5 cut(s) 215, 245, 520, 796, 898
NlaIII CATG 8 cut(s) 166, 179, 263, 629, 729, 794, 835, 938
NlaIV GGNNCC 1 cut(s) 265
NsiI ATGCAT 2 cut(s) 208, 460
NspI RCATGY 3 cut(s) 629, 729, 938
PaeI GCATGC 1 cut(s) 729
PceI AGGCCT 1 cut(s) 634
PciI ACATGT 1 cut(s) 934
PctI GAATGC 1 cut(s) 208
PdmI GAANNNNTTC 1 cut(s) 129
PfeI GAWTC 3 cut(s) 17, 555, 746
PkrI GCNGC 3 cut(s) 366, 511, 682
PscI ACATGT 1 cut(s) 934
PsiI TTATAA 2 cut(s) 42, 159
Psp6I CCWGG 1 cut(s) 266
PspGI CCWGG 1 cut(s) 266
PspN4I GGNNCC 1 cut(s) 265
PspPI GGNCC 4 cut(s) 264, 332, 511, 704
PsuI RGATCY 1 cut(s) 215
RsaI GTAC 1 cut(s) 778
RsaNI GTAC 1 cut(s) 777
RseI CAYNNNNRTG 3 cut(s) 534, 724, 789
SaqAI TTAA 6 cut(s) 222, 315, 351, 551, 713, 876
SatI GCNGC 3 cut(s) 365, 510, 681
Sau3AI GATC 5 cut(s) 215, 245, 520, 796, 898
Sau96I GGNCC 4 cut(s) 264, 332, 511, 704
ScaI AGTACT 1 cut(s) 778
ScrFI CCNGG 1 cut(s) 268
SetI ASST 8 cut(s) 124, 315, 382, 398, 604, 849, 871, 876
SfaNI GCATC 5 cut(s) 215, 333, 445, 467, 526
SfcI CTRYAG 1 cut(s) 826
SinI GGWCC 1 cut(s) 264
SmiMI CAYNNNNRTG 3 cut(s) 534, 724, 789
SmlI CTYRAG 1 cut(s) 400
SmoI CTYRAG 1 cut(s) 400
SphI GCATGC 1 cut(s) 729
Sse9I AATT 3 cut(s) 50, 129, 659
SseBI AGGCCT 1 cut(s) 634
SsiI CCGC 6 cut(s) 188, 420, 509, 524, 674, 680
SspI AATATT 1 cut(s) 691
SspMI CTAG 2 cut(s) 210, 377
StuI AGGCCT 1 cut(s) 634
StyD4I CCNGG 1 cut(s) 266
TaaI ACNGT 2 cut(s) 388, 650
TaqI TCGA 4 cut(s) 461, 534, 606, 637
TasI AATT 3 cut(s) 50, 129, 659
TatI WGTACW 1 cut(s) 776
TauI GCSGC 2 cut(s) 512, 683
TfiI GAWTC 3 cut(s) 17, 555, 746
Tru1I TTAA 6 cut(s) 222, 315, 351, 551, 713, 876
Tru9I TTAA 6 cut(s) 222, 315, 351, 551, 713, 876
TscAI CASTG 1 cut(s) 511
TseI GCWGC 1 cut(s) 364
TspDTI ATGAA 5 cut(s) 43, 215, 428, 879, 921
TspGWI ACGGA 1 cut(s) 758
TspRI CASTG 1 cut(s) 511
VpaK11BI GGWCC 1 cut(s) 264
XapI RAATTY 1 cut(s) 129
XbaI TCTAGA 1 cut(s) 209
XceI RCATGY 3 cut(s) 629, 729, 938
XmiI GTMKAC 1 cut(s) 619
XmnI GAANNNNTTC 1 cut(s) 129
XspI CTAG 2 cut(s) 210, 377
ZrmI AGTACT 1 cut(s) 778
Zsp2I ATGCAT 2 cut(s) 208, 460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.