pectinesterase pectinesterase inhibitor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1421 |
| AccB1I | GGYRCC | 2 cut(s) | 1150, 2815 |
| AccI | GTMKAC | 2 cut(s) | 325, 1089 |
| AccIII | TCCGGA | 1 cut(s) | 240 |
| AciI | CCGC | 3 cut(s) | 1397, 1526, 3040 |
| AclI | AACGTT | 2 cut(s) | 2171, 2412 |
| AcoI | YGGCCR | 2 cut(s) | 264, 2151 |
| AcsI | RAATTY | 4 cut(s) | 680, 1169, 1892, 2276 |
| AcuI | CTGAAG | 4 cut(s) | 502, 1218, 1262, 2909 |
| AcyI | GRCGYC | 1 cut(s) | 155 |
| AdeI | CACNNNGTG | 1 cut(s) | 2756 |
| AfaI | GTAC | 8 cut(s) | 44, 134, 688, 1131, 1489, 1578, 2295, 2686 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 339, 476, 1071, 1572, 1933 |
| AflII | CTTAAG | 1 cut(s) | 1472 |
| AjnI | CCWGG | 3 cut(s) | 399, 475, 1064 |
| AleI | CACNNNNGTG | 1 cut(s) | 799 |
| Alw21I | GWGCWC | 4 cut(s) | 1390, 1923, 2479, 2533 |
| Alw26I | GTCTC | 2 cut(s) | 534, 2406 |
| Aor13HI | TCCGGA | 1 cut(s) | 240 |
| AoxI | GGCC | 8 cut(s) | 24, 264, 774, 870, 1074, 1674, 2151, 2719 |
| ApeKI | GCWGC | 7 cut(s) | 223, 286, 851, 1080, 1463, 1867, 2780 |
| ApoI | RAATTY | 4 cut(s) | 680, 1169, 1892, 2276 |
| AseI | ATTAAT | 2 cut(s) | 1557, 2114 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1275 |
| AspLEI | GCGC | 1 cut(s) | 570 |
| AspS9I | GGNCC | 4 cut(s) | 275, 775, 871, 1074 |
| AsuHPI | GGTGA | 5 cut(s) | 322, 1132, 1607, 1679, 3026 |
| AsuII | TTCGAA | 1 cut(s) | 1688 |
| AsuNHI | GCTAGC | 2 cut(s) | 172, 176 |
| AvaII | GGWCC | 1 cut(s) | 275 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1113, 1146 |
| BalI | TGGCCA | 2 cut(s) | 266, 2153 |
| BamHI | GGATCC | 2 cut(s) | 727, 2035 |
| BanI | GGYRCC | 2 cut(s) | 1150, 2815 |
| BanII | GRGCYC | 3 cut(s) | 73, 1390, 2479 |
| BauI | CACGAG | 1 cut(s) | 2470 |
| BbsI | GAAGAC | 3 cut(s) | 739, 947, 2897 |
| Bbv12I | GWGCWC | 4 cut(s) | 1390, 1923, 2479, 2533 |
| BbvI | GCAGC | 7 cut(s) | 235, 298, 838, 1092, 1450, 1854, 2767 |
| BccI | CCATC | 1 cut(s) | 1220 |
| BceAI | ACGGC | 3 cut(s) | 142, 274, 936 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 743, 777 |
| BciT130I | CCWGG | 3 cut(s) | 401, 477, 1066 |
| BciVI | GTATCC | 4 cut(s) | 1844, 1876, 2208, 2671 |
| BclI | TGATCA | 5 cut(s) | 205, 412, 925, 1669, 1732 |
| BcoDI | GTCTC | 2 cut(s) | 534, 2406 |
| BfaI | CTAG | 9 cut(s) | 173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081 |
| BfmI | CTRYAG | 2 cut(s) | 1309, 2832 |
| BfrI | CTTAAG | 1 cut(s) | 1472 |
| BfuI | GTATCC | 4 cut(s) | 1844, 1876, 2208, 2671 |
| BglII | AGATCT | 1 cut(s) | 549 |
| BisI | GCNGC | 9 cut(s) | 224, 287, 852, 1081, 1397, 1464, 1868, 2781, 3041 |
| BlpI | GCTNAGC | 1 cut(s) | 2957 |
| BlsI | GCNGC | 9 cut(s) | 225, 288, 853, 1082, 1398, 1465, 1869, 2782, 3042 |
| BmcAI | AGTACT | 1 cut(s) | 2686 |
| Bme1390I | CCNGG | 3 cut(s) | 401, 477, 1066 |
| Bme18I | GGWCC | 1 cut(s) | 275 |
| BmgT120I | GGNCC | 4 cut(s) | 275, 775, 871, 1074 |
| BmiI | GGNNCC | 7 cut(s) | 729, 777, 889, 1152, 1359, 2037, 2817 |
| BmrFI | CCNGG | 3 cut(s) | 401, 477, 1066 |
| BmrI | ACTGGG | 1 cut(s) | 1395 |
| BmsI | GCATC | 9 cut(s) | 159, 502, 838, 1513, 1551, 1853, 2068, 2238, 2530 |
| BmtI | GCTAGC | 2 cut(s) | 176, 180 |
| BmuI | ACTGGG | 1 cut(s) | 1395 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1108 |
| BpiI | GAAGAC | 3 cut(s) | 739, 947, 2897 |
| BpmI | CTGGAG | 2 cut(s) | 41, 818 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2957 |
| Bpu14I | TTCGAA | 1 cut(s) | 1688 |
| BpuEI | CTTGAG | 1 cut(s) | 1843 |
| BsaHI | GRCGYC | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 3 cut(s) | 476, 2148, 2805 |
| BsaWI | WCCGGW | 1 cut(s) | 240 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 14, 44 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 339, 476, 1071, 1572, 1933 |
| Bse3DI | GCAATG | 4 cut(s) | 131, 563, 2088, 2853 |
| BseAI | TCCGGA | 1 cut(s) | 240 |
| BseBI | CCWGG | 3 cut(s) | 401, 477, 1066 |
| BseDI | CCNNGG | 3 cut(s) | 476, 2148, 2805 |
| BseGI | GGATG | 2 cut(s) | 373, 1231 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 339, 476, 1071, 1572, 1933 |
| BseMI | GCAATG | 4 cut(s) | 131, 563, 2088, 2853 |
| BseMII | CTCAG | 4 cut(s) | 270, 447, 2277, 2948 |
| BseRI | GAGGAG | 1 cut(s) | 1817 |
| BseXI | GCAGC | 7 cut(s) | 235, 298, 838, 1092, 1450, 1854, 2767 |
| BseYI | CCCAGC | 1 cut(s) | 1154 |
| BsgI | GTGCAG | 2 cut(s) | 1241, 2187 |
| BshFI | GGCC | 8 cut(s) | 26, 266, 776, 872, 1076, 1676, 2153, 2721 |
| BshNI | GGYRCC | 2 cut(s) | 1150, 2815 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1390, 1923, 2479, 2533 |
| BsiSI | CCGG | 1 cut(s) | 241 |
| BslFI | GGGAC | 2 cut(s) | 667, 3119 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 339, 476, 1071, 1572, 1933 |
| BsmAI | GTCTC | 2 cut(s) | 534, 2406 |
| BsmFI | GGGAC | 2 cut(s) | 667, 3119 |
| BsmI | GAATGC | 2 cut(s) | 1681, 2597 |
| BsnI | GGCC | 8 cut(s) | 26, 266, 776, 872, 1076, 1676, 2153, 2721 |
| Bsp119I | TTCGAA | 1 cut(s) | 1688 |
| Bsp1286I | GDGCHC | 5 cut(s) | 73, 1390, 1923, 2479, 2533 |
| Bsp13I | TCCGGA | 1 cut(s) | 240 |
| Bsp1407I | TGTACA | 1 cut(s) | 42 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2957 |
| Bsp19I | CCATGG | 2 cut(s) | 2148, 2805 |
| BspACI | CCGC | 3 cut(s) | 1397, 1526, 3040 |
| BspANI | GGCC | 8 cut(s) | 26, 266, 776, 872, 1076, 1676, 2153, 2721 |
| BspCNI | CTCAG | 4 cut(s) | 271, 448, 2278, 2949 |
| BspEI | TCCGGA | 1 cut(s) | 240 |
| BspHI | TCATGA | 2 cut(s) | 928, 1729 |
| BspLI | GGNNCC | 7 cut(s) | 729, 777, 889, 1152, 1359, 2037, 2817 |
| BspMAI | CTGCAG | 2 cut(s) | 1313, 2836 |
| BspOI | GCTAGC | 2 cut(s) | 176, 180 |
| BspT104I | TTCGAA | 1 cut(s) | 1688 |
| BspT107I | GGYRCC | 2 cut(s) | 1150, 2815 |
| BspTI | CTTAAG | 1 cut(s) | 1472 |
| BsrDI | GCAATG | 4 cut(s) | 131, 563, 2088, 2853 |
| BsrGI | TGTACA | 1 cut(s) | 42 |
| BssECI | CCNNGG | 3 cut(s) | 476, 2148, 2805 |
| BssNAI | GTATAC | 1 cut(s) | 1090 |
| BssNI | GRCGYC | 1 cut(s) | 155 |
| BssSI | CACGAG | 1 cut(s) | 2470 |
| BssT1I | CCWWGG | 2 cut(s) | 2148, 2805 |
| Bst1107I | GTATAC | 1 cut(s) | 1090 |
| Bst2BI | CACGAG | 1 cut(s) | 2470 |
| Bst2UI | CCWGG | 3 cut(s) | 401, 477, 1066 |
| Bst4CI | ACNGT | 7 cut(s) | 691, 1354, 1571, 1622, 1888, 2754, 3130 |
| Bst6I | CTCTTC | 1 cut(s) | 2409 |
| BstACI | GRCGYC | 1 cut(s) | 155 |
| BstAFI | CTTAAG | 1 cut(s) | 1472 |
| BstAUI | TGTACA | 1 cut(s) | 42 |
| BstBI | TTCGAA | 1 cut(s) | 1688 |
| BstDEI | CTNAG | 6 cut(s) | 279, 456, 1179, 2286, 2942, 2957 |
| BstDSI | CCRYGG | 2 cut(s) | 2148, 2805 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 474 |
| BstF5I | GGATG | 2 cut(s) | 373, 1231 |
| BstHHI | GCGC | 1 cut(s) | 570 |
| BstMAI | GTCTC | 2 cut(s) | 534, 2406 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 490, 1439, 2624 |
| BstNI | CCWGG | 3 cut(s) | 401, 477, 1066 |
| BstNSI | RCATGY | 2 cut(s) | 1396, 2212 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1108 |
| BstSCI | CCNGG | 3 cut(s) | 399, 475, 1064 |
| BstSFI | CTRYAG | 2 cut(s) | 1309, 2832 |
| BstV1I | GCAGC | 7 cut(s) | 235, 298, 838, 1092, 1450, 1854, 2767 |
| BstV2I | GAAGAC | 3 cut(s) | 739, 947, 2897 |
| BstX2I | RGATCY | 7 cut(s) | 549, 696, 727, 1229, 2035, 2131, 2705 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 708, 1592 |
| BstYI | RGATCY | 7 cut(s) | 549, 696, 727, 1229, 2035, 2131, 2705 |
| BstZ17I | GTATAC | 1 cut(s) | 1090 |
| BsuI | GTATCC | 4 cut(s) | 1844, 1876, 2208, 2671 |
| BsuRI | GGCC | 8 cut(s) | 26, 266, 776, 872, 1076, 1676, 2153, 2721 |
| BtgI | CCRYGG | 2 cut(s) | 2148, 2805 |
| BtsCI | GGATG | 2 cut(s) | 373, 1231 |
| BtsI | GCAGTG | 1 cut(s) | 1090 |
| CciI | TCATGA | 2 cut(s) | 928, 1729 |
| CfoI | GCGC | 1 cut(s) | 570 |
| Cfr13I | GGNCC | 4 cut(s) | 275, 775, 871, 1074 |
| CseI | GACGC | 2 cut(s) | 163, 2748 |
| Csp6I | GTAC | 8 cut(s) | 43, 133, 687, 1130, 1488, 1577, 2294, 2685 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2202, 2237 |
| CviQI | GTAC | 8 cut(s) | 43, 133, 687, 1130, 1488, 1577, 2294, 2685 |
| DdeI | CTNAG | 6 cut(s) | 279, 456, 1179, 2286, 2942, 2957 |
| DraI | TTTAAA | 1 cut(s) | 2023 |
| DraIII | CACNNNGTG | 1 cut(s) | 2756 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1421 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1421 |
| EaeI | YGGCCR | 2 cut(s) | 264, 2151 |
| Eam1104I | CTCTTC | 1 cut(s) | 2409 |
| EarI | CTCTTC | 1 cut(s) | 2409 |
| Ecl136II | GAGCTC | 2 cut(s) | 1388, 2477 |
| Eco130I | CCWWGG | 2 cut(s) | 2148, 2805 |
| Eco147I | AGGCCT | 1 cut(s) | 26 |
| Eco24I | GRGCYC | 3 cut(s) | 73, 1390, 2479 |
| Eco32I | GATATC | 1 cut(s) | 238 |
| Eco47I | GGWCC | 1 cut(s) | 275 |
| Eco53kI | GAGCTC | 2 cut(s) | 1388, 2477 |
| Eco57I | CTGAAG | 4 cut(s) | 502, 1218, 1262, 2909 |
| EcoICRI | GAGCTC | 2 cut(s) | 1388, 2477 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 474 |
| EcoO109I | RGGNCCY | 2 cut(s) | 275, 775 |
| EcoRII | CCWGG | 3 cut(s) | 399, 475, 1064 |
| EcoRV | GATATC | 1 cut(s) | 238 |
| EcoT14I | CCWWGG | 2 cut(s) | 2148, 2805 |
| EcoT22I | ATGCAT | 3 cut(s) | 1683, 2113, 2697 |
| EcoT38I | GRGCYC | 3 cut(s) | 73, 1390, 2479 |
| ErhI | CCWWGG | 2 cut(s) | 2148, 2805 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1422, 1454 |
| FaqI | GGGAC | 2 cut(s) | 667, 3119 |
| FbaI | TGATCA | 5 cut(s) | 205, 412, 925, 1669, 1732 |
| FblI | GTMKAC | 2 cut(s) | 325, 1089 |
| Fnu4HI | GCNGC | 9 cut(s) | 224, 287, 852, 1081, 1397, 1464, 1868, 2781, 3041 |
| FokI | GGATG | 2 cut(s) | 380, 1238 |
| FriOI | GRGCYC | 3 cut(s) | 73, 1390, 2479 |
| Fsp4HI | GCNGC | 9 cut(s) | 224, 287, 852, 1081, 1397, 1464, 1868, 2781, 3041 |
| FspBI | CTAG | 9 cut(s) | 173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081 |
| GlaI | GCGC | 1 cut(s) | 569 |
| GluI | GCNGC | 9 cut(s) | 224, 287, 852, 1081, 1397, 1464, 1868, 2781, 3041 |
| GsaI | CCCAGC | 1 cut(s) | 1158 |
| GsuI | CTGGAG | 2 cut(s) | 41, 818 |
| HaeIII | GGCC | 8 cut(s) | 26, 266, 776, 872, 1076, 1676, 2153, 2721 |
| HapII | CCGG | 1 cut(s) | 241 |
| HgaI | GACGC | 2 cut(s) | 163, 2748 |
| HhaI | GCGC | 1 cut(s) | 570 |
| Hin1I | GRCGYC | 1 cut(s) | 155 |
| Hin6I | GCGC | 1 cut(s) | 568 |
| HinP1I | GCGC | 1 cut(s) | 568 |
| HincII | GTYRAC | 3 cut(s) | 256, 326, 2497 |
| HindII | GTYRAC | 3 cut(s) | 256, 326, 2497 |
| HpaI | GTTAAC | 1 cut(s) | 256 |
| HpaII | CCGG | 1 cut(s) | 241 |
| HphI | GGTGA | 5 cut(s) | 322, 1132, 1607, 1679, 3026 |
| HpyAV | CCTTC | 5 cut(s) | 495, 495, 741, 1001, 2440 |
| HpyCH4III | ACNGT | 7 cut(s) | 691, 1354, 1571, 1622, 1888, 2754, 3130 |
| HpyCH4IV | ACGT | 4 cut(s) | 964, 2171, 2412, 3075 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 490, 1439, 2624 |
| HpyF3I | CTNAG | 6 cut(s) | 279, 456, 1179, 2286, 2942, 2957 |
| HpySE526I | ACGT | 4 cut(s) | 964, 2171, 2412, 3075 |
| Hsp92I | GRCGYC | 1 cut(s) | 155 |
| HspAI | GCGC | 1 cut(s) | 568 |
| Kpn2I | TCCGGA | 1 cut(s) | 240 |
| Ksp22I | TGATCA | 5 cut(s) | 205, 412, 925, 1669, 1732 |
| KspAI | GTTAAC | 1 cut(s) | 256 |
| LmnI | GCTCC | 3 cut(s) | 243, 1837, 1918 |
| Lsp1109I | GCAGC | 7 cut(s) | 235, 298, 838, 1092, 1450, 1854, 2767 |
| LweI | GCATC | 9 cut(s) | 159, 502, 838, 1513, 1551, 1853, 2068, 2238, 2530 |
| MaeI | CTAG | 9 cut(s) | 173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081 |
| MaeII | ACGT | 4 cut(s) | 964, 2171, 2412, 3075 |
| MfeI | CAATTG | 3 cut(s) | 660, 1550, 1980 |
| MflI | RGATCY | 7 cut(s) | 549, 696, 727, 1229, 2035, 2131, 2705 |
| MhlI | GDGCHC | 5 cut(s) | 73, 1390, 1923, 2479, 2533 |
| MlsI | TGGCCA | 2 cut(s) | 266, 2153 |
| MluNI | TGGCCA | 2 cut(s) | 266, 2153 |
| MlyI | GAGTC | 8 cut(s) | 50, 321, 389, 1098, 1514, 2318, 2887, 2947 |
| MmeI | TCCRAC | 5 cut(s) | 337, 1666, 1741, 1860, 2683 |
| Mox20I | TGGCCA | 2 cut(s) | 266, 2153 |
| Mph1103I | ATGCAT | 3 cut(s) | 1683, 2113, 2697 |
| MroI | TCCGGA | 1 cut(s) | 240 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1275 |
| MscI | TGGCCA | 2 cut(s) | 266, 2153 |
| MslI | CAYNNNNRTG | 3 cut(s) | 799, 2752, 2804 |
| Msp20I | TGGCCA | 2 cut(s) | 266, 2153 |
| MspA1I | CMGCKG | 1 cut(s) | 3040 |
| MspCI | CTTAAG | 1 cut(s) | 1472 |
| MspI | CCGG | 1 cut(s) | 241 |
| MspR9I | CCNGG | 3 cut(s) | 401, 477, 1066 |
| MunI | CAATTG | 3 cut(s) | 660, 1550, 1980 |
| Mva1269I | GAATGC | 2 cut(s) | 1681, 2597 |
| MvaI | CCWGG | 3 cut(s) | 401, 477, 1066 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 490, 1439, 2624 |
| NcoI | CCATGG | 2 cut(s) | 2148, 2805 |
| NheI | GCTAGC | 2 cut(s) | 172, 176 |
| NlaIV | GGNNCC | 7 cut(s) | 729, 777, 889, 1152, 1359, 2037, 2817 |
| NmuCI | GTSAC | 7 cut(s) | 199, 1016, 1120, 1412, 1506, 1814, 2849 |
| NsiI | ATGCAT | 3 cut(s) | 1683, 2113, 2697 |
| NspI | RCATGY | 2 cut(s) | 1396, 2212 |
| NspV | TTCGAA | 1 cut(s) | 1688 |
| OliI | CACNNNNGTG | 1 cut(s) | 799 |
| PaeI | GCATGC | 1 cut(s) | 1396 |
| PagI | TCATGA | 2 cut(s) | 928, 1729 |
| PceI | AGGCCT | 1 cut(s) | 26 |
| PctI | GAATGC | 2 cut(s) | 1681, 2597 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1275 |
| PfeI | GAWTC | 9 cut(s) | 360, 463, 1024, 1314, 2066, 2395, 2671, 2714, 3092 |
| PfoI | TCCNGGA | 1 cut(s) | 1064 |
| PkrI | GCNGC | 9 cut(s) | 225, 288, 853, 1082, 1398, 1465, 1869, 2782, 3042 |
| PleI | GAGTC | 8 cut(s) | 50, 321, 388, 1098, 1513, 2318, 2887, 2946 |
| PpsI | GAGTC | 8 cut(s) | 50, 321, 388, 1098, 1513, 2318, 2887, 2946 |
| PpuMI | RGGWCCY | 1 cut(s) | 275 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1108 |
| PshBI | ATTAAT | 2 cut(s) | 1557, 2114 |
| Psp124BI | GAGCTC | 2 cut(s) | 1390, 2479 |
| Psp1406I | AACGTT | 2 cut(s) | 2171, 2412 |
| Psp5II | RGGWCCY | 1 cut(s) | 275 |
| Psp6I | CCWGG | 3 cut(s) | 399, 475, 1064 |
| PspFI | CCCAGC | 1 cut(s) | 1154 |
| PspGI | CCWGG | 3 cut(s) | 399, 475, 1064 |
| PspN4I | GGNNCC | 7 cut(s) | 729, 777, 889, 1152, 1359, 2037, 2817 |
| PspPI | GGNCC | 4 cut(s) | 275, 775, 871, 1074 |
| PspPPI | RGGWCCY | 1 cut(s) | 275 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 98, 130, 1350, 1382 |
| PstI | CTGCAG | 2 cut(s) | 1313, 2836 |
| PsuI | RGATCY | 7 cut(s) | 549, 696, 727, 1229, 2035, 2131, 2705 |
| RsaI | GTAC | 8 cut(s) | 44, 134, 688, 1131, 1489, 1578, 2295, 2686 |
| RsaNI | GTAC | 8 cut(s) | 43, 133, 687, 1130, 1488, 1577, 2294, 2685 |
| RseI | CAYNNNNRTG | 3 cut(s) | 799, 2752, 2804 |
| SacI | GAGCTC | 2 cut(s) | 1390, 2479 |
| SalI | GTCGAC | 1 cut(s) | 324 |
| SatI | GCNGC | 9 cut(s) | 224, 287, 852, 1081, 1397, 1464, 1868, 2781, 3041 |
| Sau96I | GGNCC | 4 cut(s) | 275, 775, 871, 1074 |
| ScaI | AGTACT | 1 cut(s) | 2686 |
| SchI | GAGTC | 8 cut(s) | 50, 321, 389, 1098, 1514, 2318, 2887, 2947 |
| ScrFI | CCNGG | 3 cut(s) | 401, 477, 1066 |
| SduI | GDGCHC | 5 cut(s) | 73, 1390, 1923, 2479, 2533 |
| SfaNI | GCATC | 9 cut(s) | 159, 502, 838, 1513, 1551, 1853, 2068, 2238, 2530 |
| SfcI | CTRYAG | 2 cut(s) | 1309, 2832 |
| SfuI | TTCGAA | 1 cut(s) | 1688 |
| SinI | GGWCC | 1 cut(s) | 275 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 799, 2752, 2804 |
| SmlI | CTYRAG | 2 cut(s) | 1472, 1822 |
| SmoI | CTYRAG | 2 cut(s) | 1472, 1822 |
| SphI | GCATGC | 1 cut(s) | 1396 |
| SseBI | AGGCCT | 1 cut(s) | 26 |
| SsiI | CCGC | 3 cut(s) | 1397, 1526, 3040 |
| SspI | AATATT | 2 cut(s) | 543, 1995 |
| SspMI | CTAG | 9 cut(s) | 173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081 |
| SstI | GAGCTC | 2 cut(s) | 1390, 2479 |
| StuI | AGGCCT | 1 cut(s) | 26 |
| StyD4I | CCNGG | 3 cut(s) | 399, 475, 1064 |
| StyI | CCWWGG | 2 cut(s) | 2148, 2805 |
| TaaI | ACNGT | 7 cut(s) | 691, 1354, 1571, 1622, 1888, 2754, 3130 |
| TaiI | ACGT | 4 cut(s) | 967, 2174, 2415, 3078 |
| TaqI | TCGA | 8 cut(s) | 325, 499, 595, 753, 1027, 1205, 1688, 2064 |
| TatI | WGTACW | 5 cut(s) | 42, 132, 1487, 2293, 2684 |
| TauI | GCSGC | 2 cut(s) | 1399, 3043 |
| TfiI | GAWTC | 9 cut(s) | 360, 463, 1024, 1314, 2066, 2395, 2671, 2714, 3092 |
| TseFI | GTSAC | 7 cut(s) | 199, 1016, 1120, 1412, 1506, 1814, 2849 |
| TseI | GCWGC | 7 cut(s) | 223, 286, 851, 1080, 1463, 1867, 2780 |
| Tsp45I | GTSAC | 7 cut(s) | 199, 1016, 1120, 1412, 1506, 1814, 2849 |
| TspDTI | ATGAA | 9 cut(s) | 401, 476, 681, 1186, 1338, 1442, 1718, 1987, 2269 |
| TspGWI | ACGGA | 2 cut(s) | 1394, 2591 |
| Vha464I | CTTAAG | 1 cut(s) | 1472 |
| VpaK11BI | GGWCC | 1 cut(s) | 275 |
| VspI | ATTAAT | 2 cut(s) | 1557, 2114 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 474 |
| XapI | RAATTY | 4 cut(s) | 680, 1169, 1892, 2276 |
| XbaI | TCTAGA | 2 cut(s) | 1112, 2731 |
| XceI | RCATGY | 2 cut(s) | 1396, 2212 |
| XmiI | GTMKAC | 2 cut(s) | 325, 1089 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1275 |
| XspI | CTAG | 9 cut(s) | 173, 177, 183, 270, 1113, 1259, 1914, 2732, 3081 |
| ZrmI | AGTACT | 1 cut(s) | 2686 |
| Zsp2I | ATGCAT | 3 cut(s) | 1683, 2113, 2697 |