Transposase family tnp2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 202 |
| AcoI | YGGCCR | 1 cut(s) | 269 |
| AcsI | RAATTY | 3 cut(s) | 298, 572, 585 |
| AfaI | GTAC | 1 cut(s) | 178 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 539 |
| AgsI | TTSAA | 5 cut(s) | 143, 367, 514, 572, 608 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 32, 57, 64, 89 |
| AluBI | AGCT | 4 cut(s) | 73, 317, 462, 548 |
| AluI | AGCT | 4 cut(s) | 73, 317, 462, 548 |
| Alw21I | GWGCWC | 1 cut(s) | 289 |
| AlwI | GGATC | 1 cut(s) | 202 |
| AoxI | GGCC | 1 cut(s) | 269 |
| ApeKI | GCWGC | 1 cut(s) | 317 |
| ApoI | RAATTY | 3 cut(s) | 298, 572, 585 |
| AsuHPI | GGTGA | 1 cut(s) | 412 |
| BaeGI | GKGCMC | 1 cut(s) | 410 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 618, 651 |
| Bbv12I | GWGCWC | 1 cut(s) | 289 |
| BbvI | GCAGC | 1 cut(s) | 304 |
| BccI | CCATC | 2 cut(s) | 215, 317 |
| BceAI | ACGGC | 1 cut(s) | 450 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 543, 577 |
| BfaI | CTAG | 2 cut(s) | 189, 441 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 268 |
| BglII | AGATCT | 1 cut(s) | 446 |
| BisI | GCNGC | 1 cut(s) | 318 |
| BlsI | GCNGC | 1 cut(s) | 319 |
| BmsI | GCATC | 2 cut(s) | 367, 505 |
| BpuEI | CTTGAG | 1 cut(s) | 120 |
| BsaAI | YACGTR | 1 cut(s) | 634 |
| BsaBI | GATNNNNATC | 1 cut(s) | 357 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 539 |
| Bse8I | GATNNNNATC | 1 cut(s) | 357 |
| BseGI | GGATG | 1 cut(s) | 622 |
| BseJI | GATNNNNATC | 1 cut(s) | 357 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 539 |
| BseSI | GKGCMC | 1 cut(s) | 410 |
| BseXI | GCAGC | 1 cut(s) | 304 |
| BshFI | GGCC | 1 cut(s) | 271 |
| BsiHKAI | GWGCWC | 1 cut(s) | 289 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 539 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| BsnI | GGCC | 1 cut(s) | 271 |
| Bsp1286I | GDGCHC | 2 cut(s) | 289, 410 |
| Bsp143I | GATC | 2 cut(s) | 194, 446 |
| BspANI | GGCC | 1 cut(s) | 271 |
| BspPI | GGATC | 1 cut(s) | 202 |
| BssMI | GATC | 2 cut(s) | 194, 446 |
| Bst4CI | ACNGT | 1 cut(s) | 488 |
| BstBAI | YACGTR | 1 cut(s) | 634 |
| BstF5I | GGATG | 1 cut(s) | 622 |
| BstKTI | GATC | 2 cut(s) | 197, 449 |
| BstMBI | GATC | 2 cut(s) | 194, 446 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 268 |
| BstSLI | GKGCMC | 1 cut(s) | 410 |
| BstV1I | GCAGC | 1 cut(s) | 304 |
| BstX2I | RGATCY | 1 cut(s) | 446 |
| BstYI | RGATCY | 1 cut(s) | 446 |
| BsuRI | GGCC | 1 cut(s) | 271 |
| BtsCI | GGATG | 1 cut(s) | 622 |
| BtsIMutI | CAGTG | 1 cut(s) | 596 |
| Csp6I | GTAC | 1 cut(s) | 177 |
| CviJI | RGCY | 9 cut(s) | 73, 89, 262, 271, 317, 437, 462, 529, 548 |
| CviKI_1 | RGCY | 9 cut(s) | 73, 89, 262, 271, 317, 437, 462, 529, 548 |
| CviQI | GTAC | 1 cut(s) | 177 |
| DpnI | GATC | 2 cut(s) | 196, 448 |
| DpnII | GATC | 2 cut(s) | 194, 446 |
| EaeI | YGGCCR | 1 cut(s) | 269 |
| FaiI | YATR | 5 cut(s) | 12, 36, 129, 381, 432 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 494, 526 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| Fnu4HI | GCNGC | 1 cut(s) | 318 |
| FokI | GGATG | 1 cut(s) | 629 |
| Fsp4HI | GCNGC | 1 cut(s) | 318 |
| FspBI | CTAG | 2 cut(s) | 189, 441 |
| GluI | GCNGC | 1 cut(s) | 318 |
| HaeIII | GGCC | 1 cut(s) | 271 |
| HinfI | GANTC | 4 cut(s) | 225, 237, 376, 535 |
| HphI | GGTGA | 1 cut(s) | 412 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 61 |
| Hpy188I | TCNGA | 1 cut(s) | 230 |
| Hpy188III | TCNNGA | 3 cut(s) | 189, 482, 569 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 61 |
| HpyAV | CCTTC | 2 cut(s) | 397, 589 |
| HpyCH4III | ACNGT | 1 cut(s) | 488 |
| HpyCH4IV | ACGT | 1 cut(s) | 633 |
| HpyCH4V | TGCA | 2 cut(s) | 452, 564 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 268 |
| HpySE526I | ACGT | 1 cut(s) | 633 |
| Kzo9I | GATC | 2 cut(s) | 194, 446 |
| LpnPI | CCDG | 2 cut(s) | 351, 467 |
| Lsp1109I | GCAGC | 1 cut(s) | 304 |
| LweI | GCATC | 2 cut(s) | 367, 505 |
| MaeI | CTAG | 2 cut(s) | 189, 441 |
| MaeII | ACGT | 1 cut(s) | 633 |
| MaeIII | GTNAC | 1 cut(s) | 504 |
| MalI | GATC | 2 cut(s) | 196, 448 |
| MboI | GATC | 2 cut(s) | 194, 446 |
| MboII | GAAGA | 2 cut(s) | 230, 635 |
| MflI | RGATCY | 1 cut(s) | 446 |
| MhlI | GDGCHC | 2 cut(s) | 289, 410 |
| MluCI | AATT | 6 cut(s) | 7, 290, 298, 559, 572, 585 |
| MlyI | GAGTC | 2 cut(s) | 234, 385 |
| MmeI | TCCRAC | 1 cut(s) | 470 |
| MnlI | CCTC | 4 cut(s) | 113, 185, 468, 613 |
| MseI | TTAA | 2 cut(s) | 30, 471 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 268 |
| NdeII | GATC | 2 cut(s) | 194, 446 |
| NmeAIII | GCCGAG | 1 cut(s) | 297 |
| NmuCI | GTSAC | 1 cut(s) | 504 |
| PfeI | GAWTC | 2 cut(s) | 237, 535 |
| PkrI | GCNGC | 1 cut(s) | 319 |
| PleI | GAGTC | 2 cut(s) | 233, 384 |
| PpsI | GAGTC | 2 cut(s) | 233, 384 |
| Ppu21I | YACGTR | 1 cut(s) | 634 |
| PsuI | RGATCY | 1 cut(s) | 446 |
| RsaI | GTAC | 1 cut(s) | 178 |
| RsaNI | GTAC | 1 cut(s) | 177 |
| SaqAI | TTAA | 2 cut(s) | 30, 471 |
| SatI | GCNGC | 1 cut(s) | 318 |
| Sau3AI | GATC | 2 cut(s) | 194, 446 |
| SchI | GAGTC | 2 cut(s) | 234, 385 |
| SduI | GDGCHC | 2 cut(s) | 289, 410 |
| SetI | ASST | 7 cut(s) | 75, 124, 319, 464, 479, 550, 636 |
| SfaNI | GCATC | 2 cut(s) | 367, 505 |
| SmlI | CTYRAG | 1 cut(s) | 135 |
| SmoI | CTYRAG | 1 cut(s) | 135 |
| Sse9I | AATT | 6 cut(s) | 7, 290, 298, 559, 572, 585 |
| SspI | AATATT | 4 cut(s) | 43, 202, 524, 611 |
| SspMI | CTAG | 2 cut(s) | 189, 441 |
| TaaI | ACNGT | 1 cut(s) | 488 |
| TaiI | ACGT | 1 cut(s) | 636 |
| TasI | AATT | 6 cut(s) | 7, 290, 298, 559, 572, 585 |
| TfiI | GAWTC | 2 cut(s) | 237, 535 |
| Tru1I | TTAA | 2 cut(s) | 30, 471 |
| Tru9I | TTAA | 2 cut(s) | 30, 471 |
| TscAI | CASTG | 1 cut(s) | 596 |
| TseFI | GTSAC | 1 cut(s) | 504 |
| TseI | GCWGC | 1 cut(s) | 317 |
| Tsp45I | GTSAC | 1 cut(s) | 504 |
| TspDTI | ATGAA | 1 cut(s) | 197 |
| TspRI | CASTG | 1 cut(s) | 596 |
| XapI | RAATTY | 3 cut(s) | 298, 572, 585 |
| XbaI | TCTAGA | 1 cut(s) | 188 |
| XspI | CTAG | 2 cut(s) | 189, 441 |