Transposase family tnp2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 153 |
| AcyI | GRCGYC | 1 cut(s) | 150 |
| AfaI | GTAC | 1 cut(s) | 346 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 16 |
| AgsI | TTSAA | 4 cut(s) | 92, 280, 366, 385 |
| AjnI | CCWGG | 1 cut(s) | 172 |
| AluBI | AGCT | 1 cut(s) | 238 |
| AluI | AGCT | 1 cut(s) | 238 |
| Alw26I | GTCTC | 2 cut(s) | 53, 104 |
| AspS9I | GGNCC | 2 cut(s) | 197, 269 |
| AvaII | GGWCC | 2 cut(s) | 197, 269 |
| AxyI | CCTNAGG | 1 cut(s) | 264 |
| BciT130I | CCWGG | 1 cut(s) | 174 |
| BcoDI | GTCTC | 2 cut(s) | 53, 104 |
| BfaI | CTAG | 1 cut(s) | 371 |
| Bme1390I | CCNGG | 1 cut(s) | 174 |
| Bme18I | GGWCC | 2 cut(s) | 197, 269 |
| BmgT120I | GGNCC | 2 cut(s) | 197, 269 |
| BmiI | GGNNCC | 2 cut(s) | 171, 270 |
| BmrFI | CCNGG | 1 cut(s) | 174 |
| BpuEI | CTTGAG | 1 cut(s) | 280 |
| BsaHI | GRCGYC | 1 cut(s) | 150 |
| BsaJI | CCNNGG | 3 cut(s) | 173, 193, 430 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 16 |
| Bse118I | RCCGGY | 1 cut(s) | 357 |
| Bse21I | CCTNAGG | 1 cut(s) | 264 |
| Bse3DI | GCAATG | 1 cut(s) | 225 |
| BseBI | CCWGG | 1 cut(s) | 174 |
| BseDI | CCNNGG | 3 cut(s) | 173, 193, 430 |
| BseGI | GGATG | 1 cut(s) | 25 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BseMI | GCAATG | 1 cut(s) | 225 |
| BsiSI | CCGG | 1 cut(s) | 358 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BsmAI | GTCTC | 2 cut(s) | 53, 104 |
| BsmI | GAATGC | 1 cut(s) | 361 |
| BspLI | GGNNCC | 2 cut(s) | 171, 270 |
| BsrDI | GCAATG | 1 cut(s) | 225 |
| BsrFI | RCCGGY | 1 cut(s) | 357 |
| BssAI | RCCGGY | 1 cut(s) | 357 |
| BssECI | CCNNGG | 3 cut(s) | 173, 193, 430 |
| BssNI | GRCGYC | 1 cut(s) | 150 |
| BssT1I | CCWWGG | 1 cut(s) | 430 |
| Bst2UI | CCWGG | 1 cut(s) | 174 |
| Bst4CI | ACNGT | 1 cut(s) | 194 |
| Bst6I | CTCTTC | 1 cut(s) | 18 |
| BstACI | GRCGYC | 1 cut(s) | 150 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 367 |
| BstDEI | CTNAG | 1 cut(s) | 264 |
| BstDSI | CCRYGG | 1 cut(s) | 193 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 25 |
| BstMAI | GTCTC | 2 cut(s) | 53, 104 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 367 |
| BstNI | CCWGG | 1 cut(s) | 174 |
| BstSCI | CCNGG | 1 cut(s) | 172 |
| Bsu36I | CCTNAGG | 1 cut(s) | 264 |
| BtgI | CCRYGG | 1 cut(s) | 193 |
| BtsCI | GGATG | 1 cut(s) | 25 |
| Cfr10I | RCCGGY | 1 cut(s) | 357 |
| Cfr13I | GGNCC | 2 cut(s) | 197, 269 |
| Csp6I | GTAC | 1 cut(s) | 345 |
| CviJI | RGCY | 3 cut(s) | 170, 238, 391 |
| CviKI_1 | RGCY | 3 cut(s) | 170, 238, 391 |
| CviQI | GTAC | 1 cut(s) | 345 |
| DdeI | CTNAG | 1 cut(s) | 264 |
| Eam1104I | CTCTTC | 1 cut(s) | 18 |
| EarI | CTCTTC | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 430 |
| Eco47I | GGWCC | 2 cut(s) | 197, 269 |
| Eco81I | CCTNAGG | 1 cut(s) | 264 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 14 |
| EcoRII | CCWGG | 1 cut(s) | 172 |
| EcoT14I | CCWWGG | 1 cut(s) | 430 |
| ErhI | CCWWGG | 1 cut(s) | 430 |
| FaiI | YATR | 4 cut(s) | 13, 15, 48, 131 |
| FokI | GGATG | 1 cut(s) | 32 |
| FspBI | CTAG | 1 cut(s) | 371 |
| HapII | CCGG | 1 cut(s) | 358 |
| Hin1I | GRCGYC | 1 cut(s) | 150 |
| HinfI | GANTC | 5 cut(s) | 4, 247, 291, 300, 396 |
| HpaII | CCGG | 1 cut(s) | 358 |
| Hpy166II | GTNNAC | 2 cut(s) | 272, 347 |
| Hpy188I | TCNGA | 1 cut(s) | 166 |
| Hpy188III | TCNNGA | 4 cut(s) | 230, 297, 382, 459 |
| Hpy8I | GTNNAC | 2 cut(s) | 272, 347 |
| Hpy99I | CGWCG | 1 cut(s) | 104 |
| HpyAV | CCTTC | 2 cut(s) | 274, 442 |
| HpyCH4III | ACNGT | 1 cut(s) | 194 |
| HpyCH4IV | ACGT | 1 cut(s) | 150 |
| HpyCH4V | TGCA | 1 cut(s) | 439 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 367 |
| HpyF3I | CTNAG | 1 cut(s) | 264 |
| HpySE526I | ACGT | 1 cut(s) | 150 |
| Hsp92I | GRCGYC | 1 cut(s) | 150 |
| LmnI | GCTCC | 1 cut(s) | 175 |
| LpnPI | CCDG | 5 cut(s) | 159, 186, 218, 363, 371 |
| MaeI | CTAG | 1 cut(s) | 371 |
| MaeII | ACGT | 1 cut(s) | 150 |
| MaeIII | GTNAC | 2 cut(s) | 5, 373 |
| MboII | GAAGA | 3 cut(s) | 35, 47, 220 |
| MluCI | AATT | 2 cut(s) | 211, 339 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 4 cut(s) | 10, 19, 160, 217 |
| MseI | TTAA | 2 cut(s) | 84, 404 |
| MslI | CAYNNNNRTG | 1 cut(s) | 12 |
| MspI | CCGG | 1 cut(s) | 358 |
| MspR9I | CCNGG | 1 cut(s) | 174 |
| Mva1269I | GAATGC | 1 cut(s) | 361 |
| MvaI | CCWGG | 1 cut(s) | 174 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 367 |
| NlaIV | GGNNCC | 2 cut(s) | 171, 270 |
| NmuCI | GTSAC | 2 cut(s) | 5, 373 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PctI | GAATGC | 1 cut(s) | 361 |
| PfeI | GAWTC | 4 cut(s) | 247, 291, 300, 396 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| Psp6I | CCWGG | 1 cut(s) | 172 |
| PspGI | CCWGG | 1 cut(s) | 172 |
| PspN4I | GGNNCC | 2 cut(s) | 171, 270 |
| PspPI | GGNCC | 2 cut(s) | 197, 269 |
| RsaI | GTAC | 1 cut(s) | 346 |
| RsaNI | GTAC | 1 cut(s) | 345 |
| RseI | CAYNNNNRTG | 1 cut(s) | 12 |
| SaqAI | TTAA | 2 cut(s) | 84, 404 |
| Sau96I | GGNCC | 2 cut(s) | 197, 269 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 174 |
| SetI | ASST | 6 cut(s) | 12, 153, 240, 285, 352, 453 |
| SinI | GGWCC | 2 cut(s) | 197, 269 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 12 |
| SmlI | CTYRAG | 1 cut(s) | 295 |
| SmoI | CTYRAG | 1 cut(s) | 295 |
| Sse9I | AATT | 2 cut(s) | 211, 339 |
| SspI | AATATT | 1 cut(s) | 88 |
| SspMI | CTAG | 1 cut(s) | 371 |
| StyD4I | CCNGG | 1 cut(s) | 172 |
| StyI | CCWWGG | 1 cut(s) | 430 |
| TaaI | ACNGT | 1 cut(s) | 194 |
| TaiI | ACGT | 1 cut(s) | 153 |
| TasI | AATT | 2 cut(s) | 211, 339 |
| TatI | WGTACW | 1 cut(s) | 344 |
| TfiI | GAWTC | 4 cut(s) | 247, 291, 300, 396 |
| Tru1I | TTAA | 2 cut(s) | 84, 404 |
| Tru9I | TTAA | 2 cut(s) | 84, 404 |
| TseFI | GTSAC | 2 cut(s) | 5, 373 |
| Tsp45I | GTSAC | 2 cut(s) | 5, 373 |
| TspDTI | ATGAA | 3 cut(s) | 36, 125, 150 |
| VpaK11BI | GGWCC | 2 cut(s) | 197, 269 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 14 |
| XspI | CTAG | 1 cut(s) | 371 |
| ZraI | GACGTC | 1 cut(s) | 151 |