Rorug05G0284400

udp-glucuronic acid decarboxylase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
32618907 .. 32623965
5059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0284400.1

Sequence Viewer

Length: 1386 bp
ATGCTTGGCGCTATAAGGCGAAGACTCGTCTCTGGAGCCTCCTCTCCTTCGATTTTGGGCCACTCAATCCGACCTATTGCAAACAAGGAGATTTTACCTCAAATCGGAGGAGGATTGGGTCATGTGCGCAATCATTCTCACCTCATTTTAGCAGGTTCATCGCATTGTATCAGAACTCCGAGGGATGTTGGAAGCTCTATTCAGCCAGAGCCTATCAGGCAAATGTGGAGCAGACCCTTTTCTTCTGAGACTGGGGATTTGGTTGACGCCGTTGTGCCTTTTATGGGTGAATCTATTACTGATGGAACTTTGGCGACATTCTTGAAGAAGCCTGGAGACCGGGTGGAAGTTGATGAACCAATTGCTCAAATTGAAACAGATAAGGTCACGATCGATGTTGCTAGTCCTGAATCCGGTGTAATTGAGAAGTTTGTAGCCAATGAAGGGGATACTGTGGAACCAGGCACCAAGATTGCTGTCATACTAAAGTCTGGTGAAGATGTATCCCATGTGGGTCCATCTGAGAAAACATTGGAGAAAGCTATTCCACAACCAGCTTCCCCTGTAGAAACAATTAGCAAGAATCAAACATCTAAAGTTGAAACAACTCTAGTTACCGAGAAGCCTAAAGTTCCCTCCCCACCATCTCCCAAACCCTCAGCTCAAGAACCTCAGCTCCCCCCTAAGGAAAGAGAAAGACGGATTCCTATGACAACGCTTCGGAAACGGATTGCTAAAAGATTGAAAGATTCACAGAACACATATGCAATGCTTACAACATTCAATGAAGTTGATATGACAAATTTGATGAAGCTTCGTTCTGACTTCAAGGATGCATTTGTTGAGAAGCATGGGGTCAAGTTGGGGCTTATGTCGGGATTCATCAAGGCTGCTGTCAGTGGGCTCCAAAATCAGCCTACTATTAATGCAGTCATTGATGGGGATGATATCATATATAGAGATTACATAGATATAAGTGTAGCCGTGGGTACTCCAAAGGGCCTTGTTGTGCCAGTTATTCGTAATGCTGATAAGATGAATTGTGCTGAGATAGAGAAGGAGATCAATTTCCTCGCAAAGAAGGCAAATGAGGGACGTCTTTCAATTGATGAGATGGCTGGAGGTTCATTTACAATATCCAATGGTGGAGTTTATGGAAGCCTTATAAGTACCCCCATCATCAACCCTCCTCAGTCAGCAATCTTGGGTATGCACTCAATAGTGACCCGGCCAATGGTTGTTGGAGGTGAGATTGTCCCGCGGCCGATGATGTACATTGCTCTTACCTATGACCATAGGCTGATTGATGGAAGAGAGGCAGTTTACTTCTTGCGTCGTGTTAAAGATGTTGTGGAGGACCCAAGGAGGCTTCTCCTTGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

461

Amino Acids

50.22

Weight (kDa)

7.76

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Biotin_lipoyl PF00364 92 - 161 3.5e-17 Biotin-requiring enzyme
2-oxoacid_dh PF00198 230 - 459 1.5e-84 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000040)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00150 FvH4_2g13531 FvH4_2g21543 FvH4_3g32800 FvH4_3g32802 FvH4_4g00091 FvH4_4g00092 FvH4_5g22070 FvH4_5g31391 FvH4_6g11351 FvH4_6g23430 FvH4_6g23672 FvH4_6g52753
malus_domestica MD03G1101500.v1.1 MD08G1234800.v1.1
pyrus_communis pycom07g24860 pycom09g07860 pycom10g09330 pycom10g15360 pycom11g01600 pycom11g13460 pycom13g15580
rosa_chinensis RchiOBHm_Chr1g0332021 RchiOBHm_Chr2g0095801 RchiOBHm_Chr2g0111771 RchiOBHm_Chr2g0127541 RchiOBHm_Chr2g0136581 RchiOBHm_Chr2g0136591 RchiOBHm_Chr2g0143311 RchiOBHm_Chr2g0145131 RchiOBHm_Chr2g0151391 RchiOBHm_Chr3g0468771 RchiOBHm_Chr3g0473281 RchiOBHm_Chr3g0481961 RchiOBHm_Chr4g0393741 RchiOBHm_Chr4g0397391 RchiOBHm_Chr4g0435991 RchiOBHm_Chr5g0015951 RchiOBHm_Chr5g0016651 RchiOBHm_Chr5g0039191 RchiOBHm_Chr5g0039211 RchiOBHm_Chr6g0254441 RchiOBHm_Chr6g0260911 RchiOBHm_Chr6g0274501 RchiOBHm_Chr6g0274511 RchiOBHm_Chr7g0184951 RchiOBHm_Chr7g0201701 RchiOBHm_Chr7g0201721 RchiOBHm_Chr7g0201731 RchiOBHm_Chr7g0234921 RchiOBHm_Chr7g0237841
rosa_laevigata RLG00000001204 RLG00000001230 RLG00000001341 RLG00000001513 RLG00000001971 RLG00000002177 RLG00000002360 RLG00000003112 RLG00000003130 RLG00000003854 RLG00000008209 RLG00000008322 RLG00000008412 RLG00000008524 RLG00000009491 RLG00000009908 RLG00000011823 RLG00000013252 RLG00000013782 RLG00000013944 RLG00000014480 RLG00000019084 RLG00000019544 RLG00000019751 RLG00000020093 RLG00000020094 RLG00000020551 RLG00000020838 RLG00000020982 RLG00000021059 RLG00000022067 RLG00000022604 RLG00000022632 RLG00000022849 RLG00000023962 RLG00000025767 RLG00000026838 RLG00000027291 RLG00000028131 RLG00000028210 RLG00000028834 RLG00000030169 RLG00000031271 RLG00000032327 RLG00000033996 RLG00000034546 RLG00000034654 RLG00000034810 RLG00000035087 RLG00000036782
rosa_multiflora Rmu_co8330487.1_g000001 Rmu_co8359977.1_g000001 Rmu_co8445341.1_g000001 Rmu_sc0000141.1_g000003 Rmu_sc0000353.1_g000018 Rmu_sc0000740.1_g000017 Rmu_sc0000744.1_g000138 Rmu_sc0000813.1_g000014 Rmu_sc0000908.1_g000003 Rmu_sc0000999.1_g000014 Rmu_sc0001103.1_g000001 Rmu_sc0001248.1_g000013 Rmu_sc0001282.1_g000021 Rmu_sc0001293.1_g000018 Rmu_sc0001608.1_g000015 Rmu_sc0001616.1_g000060 Rmu_sc0001851.1_g000013 Rmu_sc0001990.1_g000003 Rmu_sc0002138.1_g000002 Rmu_sc0002200.1_g000021 Rmu_sc0002230.1_g000029 Rmu_sc0002230.1_g000030 Rmu_sc0002702.1_g000017 Rmu_sc0002806.1_g000010 Rmu_sc0002809.1_g000023 Rmu_sc0002869.1_g000005 Rmu_sc0003156.1_g000027 Rmu_sc0003368.1_g000018 Rmu_sc0003642.1_g000007 Rmu_sc0003653.1_g000004 Rmu_sc0003791.1_g000008 Rmu_sc0003804.1_g000013 Rmu_sc0004015.1_g000022 Rmu_sc0004230.1_g000017 Rmu_sc0004368.1_g000011 Rmu_sc0004529.1_g000011 Rmu_sc0004540.1_g000011 Rmu_sc0005008.1_g000014 Rmu_sc0005171.1_g000001 Rmu_sc0005212.1_g000013 Rmu_sc0005947.1_g000003 Rmu_sc0006317.1_g000026 Rmu_sc0006578.1_g000005 Rmu_sc0006993.1_g000001 Rmu_sc0007442.1_g000002 Rmu_sc0007442.1_g000004 Rmu_sc0007876.1_g000004 Rmu_sc0007876.1_g000005 Rmu_sc0009624.1_g000004 Rmu_sc0009742.1_g000005 Rmu_sc0010306.1_g000007 Rmu_sc0011745.1_g000008 Rmu_sc0011800.1_g000003 Rmu_sc0012369.1_g000003 Rmu_sc0012787.1_g000003 Rmu_sc0012989.1_g000001 Rmu_sc0013416.1_g000003 Rmu_sc0021155.1_g000001 Rmu_sc0022372.1_g000001 Rmu_sc0023106.1_g000001 Rmu_sc0023684.1_g000003 Rmu_sc0023684.1_g000004 Rmu_sc0026897.1_g000001 Rmu_sc0027278.1_g000001 Rmu_sc0028533.1_g000001 Rmu_sc0028533.1_g000003 Rmu_sc0038440.1_g000001
rosa_roxburghii Rroxscaffold_1G00031730 Rroxscaffold_1G00033690 Rroxscaffold_1G00073100 Rroxscaffold_2G00079640 Rroxscaffold_2G00089760 Rroxscaffold_2G00091520 Rroxscaffold_2G00112420 Rroxscaffold_2G00115720 Rroxscaffold_2G00116170 Rroxscaffold_2G00116180 Rroxscaffold_2G00152590 Rroxscaffold_2G00155940 Rroxscaffold_3G00220010 Rroxscaffold_3G00234940 Rroxscaffold_3G00235250 Rroxscaffold_3G00237510 Rroxscaffold_3G00250950 Rroxscaffold_3G00250960 Rroxscaffold_3G00262030 Rroxscaffold_4G00299560 Rroxscaffold_4G00306000 Rroxscaffold_4G00311350 Rroxscaffold_4G00318530 Rroxscaffold_4G00329140 Rroxscaffold_5G00342020 Rroxscaffold_5G00350770 Rroxscaffold_5G00354620 Rroxscaffold_5G00354630 Rroxscaffold_5G00361180 Rroxscaffold_5G00377270 Rroxscaffold_6G00397870 Rroxscaffold_6G00397960 Rroxscaffold_6G00407290 Rroxscaffold_6G00408690 Rroxscaffold_6G00421900 Rroxscaffold_6G00421910 Rroxscaffold_7G00181630 Rroxscaffold_7G00182330 Rroxscaffold_7G00182340 Rroxscaffold_7G00212590 Rroxscaffold_7G00214060 Rroxscaffold_7G00214070 Rroxscaffold_7G00215940
rosa_rugosa Rorug01G0052800 Rorug01G0052800 Rorug01G0075200 Rorug01G0090500 Rorug01G0091500 Rorug01G0106000 Rorug01G0309300 Rorug01G0309400.1 Rorug02G0092000 Rorug02G0128200 Rorug02G0152800 Rorug02G0366100 Rorug02G0401500 Rorug02G0465600 Rorug02G0474400 Rorug03G0322500 Rorug04G0044000 Rorug04G0044100 Rorug04G0064800.1 Rorug04G0077400 Rorug04G0094800 Rorug04G0094800 Rorug04G0111400 Rorug04G0137800 Rorug04G0137900 Rorug04G0138000 Rorug04G0138000 Rorug04G0446200 Rorug05G0090600 Rorug05G0239900 Rorug05G0284400 Rorug05G0534400 Rorug05G0561600 Rorug06G0098100 Rorug06G0098100 Rorug06G0134500 Rorug06G0238500 Rorug06G0238600 Rorug07G0228900 Rorug07G0229000 Rorug07G0291600 Rorug07G0291700
rosa_samantha Rh1AG082200 Rh1AG129200 Rh1AG131500 Rh1AG159900 Rh1AG330800 Rh1AG408400 Rh1BG089600 Rh1CG086000 Rh1CG149200 Rh1CG405600 Rh1DG008200 Rh1DG015800 Rh1DG068000 Rh1DG118400 Rh1DG122500 Rh1DG202400 Rh1DG202500 Rh1DG266300 Rh1DG266400 Rh1DG287400 Rh1DG314700 Rh1DG314800 Rh2AG128400 Rh2AG128500 Rh2AG291000 Rh2AG347900 Rh2AG350700 Rh2AG415100 Rh2AG417200 Rh2AG497700 Rh2AG505000 Rh2AG507600 Rh2BG131300 Rh2BG233900 Rh2BG291700 Rh2BG291800 Rh2BG302700 Rh2BG302800 Rh2BG334700 Rh2BG334900 Rh2BG347000 Rh2BG347800 Rh2BG357100 Rh2BG528200 Rh2BG528300 Rh2BG603700 Rh2CG032300 Rh2CG034300 Rh2CG232600 Rh2CG483700 Rh2DG077400 Rh2DG103100 Rh2DG103200 Rh2DG287000 Rh2DG287200 Rh2DG375000 Rh2DG382700 Rh2DG537400 Rh2DG602900 Rh2DG603000 Rh3AG080800 Rh3AG217300 Rh3AG321800 Rh3BG082700 Rh3BG082800 Rh3BG168600 Rh3BG185900 Rh3BG224400 Rh3BG250500 Rh3BG260700 Rh3BG351300 Rh3BG353600 Rh3BG353700 Rh3CG082900 Rh3CG083000 Rh3CG176200 Rh3CG176300 Rh3CG219400 Rh3CG219500 Rh3CG254600 Rh3CG254700 Rh3CG256000 Rh3CG256100 Rh3CG257400 Rh3CG356200 Rh3CG356300 Rh3DG084300 Rh4AG030500 Rh4BG132300 Rh4BG139800 Rh4BG140000 Rh4CG027200 Rh4CG033100 Rh4CG033200 Rh4CG069600 Rh4CG103300 Rh4CG322600 Rh4DG028500 Rh4DG081000 Rh4DG190200 Rh4DG193500 Rh4DG212900 Rh4DG303900 Rh4DG342900 Rh5AG131000 Rh5AG166800 Rh5AG167000 Rh5AG201600 Rh5AG372200 Rh5AG372300 Rh5AG417900 Rh5BG082500 Rh5BG171200 Rh5BG171300 Rh5BG180300 Rh5BG194400 Rh5BG302800 Rh5BG343300 Rh5BG402700 Rh5BG428500 Rh5CG190700 Rh5CG190800 Rh5CG219100 Rh5CG451900 Rh5DG175200 Rh5DG175400 Rh5DG177000 Rh5DG177100 Rh5DG356000 Rh5DG356100 Rh5DG493500 Rh6AG006700 Rh6AG051700 Rh6AG064100 Rh6AG064200 Rh6AG064500 Rh6AG092800 Rh6AG152000 Rh6AG152100 Rh6AG291900 Rh6AG419000 Rh6AG465900 Rh6AG466000 Rh6BG125000 Rh6BG160600 Rh6BG161800 Rh6BG359100 Rh6BG359200 Rh6CG071400 Rh6CG071500 Rh6CG103500 Rh6CG103600 Rh6CG117200 Rh6CG123700 Rh6CG123800 Rh6CG156600 Rh6CG192500 Rh6CG208600 Rh6CG208700 Rh6CG365200 Rh6DG146200 Rh6DG146800 Rh6DG193200 Rh6DG193300 Rh6DG193400 Rh6DG349200 Rh7AG251100 Rh7AG259300 Rh7AG425100 Rh7BG262700 Rh7BG262900 Rh7BG369500 Rh7CG107400 Rh7CG107500 Rh7CG257400 Rh7CG267300 Rh7DG070500 Rh7DG105000 Rh7DG198500 Rh7DG291300 Rh7DG480600
rosa_wichuraiana Rw2G027920 Rw3G014750 Rw3G021490 Rw4G001910 Rw6G013120 Rw6G020040 Rw6G022930 Rw6G041900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1166
AatII GACGTC 1 cut(s) 1099
Acc16I TGCGCA 1 cut(s) 128
Acc36I ACCTGC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 464
AccII CGCG 1 cut(s) 1261
AciI CCGC 2 cut(s) 1259, 1261
AcoI YGGCCR 2 cut(s) 1229, 1262
AcsI RAATTY 1 cut(s) 802
AcyI GRCGYC 2 cut(s) 267, 1096
AfaI GTAC 3 cut(s) 991, 1171, 1274
AfiI CCNNNNNNNGG 6 cut(s) 104, 284, 413, 444, 685, 1234
AgsI TTSAA 7 cut(s) 325, 374, 602, 745, 784, 829, 1104
AjnI CCWGG 2 cut(s) 331, 460
AloI GAACNNNNNNTCC 2 cut(s) 660, 692
AluBI AGCT 6 cut(s) 195, 542, 557, 662, 676, 814
AluI AGCT 6 cut(s) 195, 542, 557, 662, 676, 814
Alw26I GTCTC 3 cut(s) 34, 242, 330
AoxI GGCC 4 cut(s) 58, 1000, 1229, 1262
ApeKI GCWGC 1 cut(s) 890
ApoI RAATTY 1 cut(s) 802
ArsI GACNNNNNNTTYG 2 cut(s) 241, 273
AseI ATTAAT 1 cut(s) 924
AspLEI GCGC 2 cut(s) 11, 129
AspS9I GGNCC 4 cut(s) 58, 515, 1000, 1357
AsuC2I CCSGG 2 cut(s) 341, 1228
AsuHPI GGTGA 4 cut(s) 131, 299, 506, 1259
AvaII GGWCC 2 cut(s) 515, 1357
AxyI CCTNAGG 1 cut(s) 684
BanI GGYRCC 1 cut(s) 464
BanII GRGCYC 1 cut(s) 906
BbsI GAAGAC 1 cut(s) 28
BbvCI CCTCAGC 2 cut(s) 658, 672
BbvI GCAGC 1 cut(s) 877
BccI CCATC 7 cut(s) 296, 526, 652, 932, 1108, 1184, 1301
BceAI ACGGC 2 cut(s) 254, 968
BcgI CGANNNNNNTGC 2 cut(s) 141, 175
BciT130I CCWGG 2 cut(s) 333, 462
BciVI GTATCC 2 cut(s) 442, 514
BcnI CCSGG 2 cut(s) 341, 1228
BcoDI GTCTC 3 cut(s) 34, 242, 330
BfaI CTAG 2 cut(s) 402, 611
BfmI CTRYAG 1 cut(s) 564
BfoI RGCGCY 1 cut(s) 12
BfuAI ACCTGC 1 cut(s) 143
BfuI GTATCC 2 cut(s) 442, 514
BglI GCCNNNNNGGC 1 cut(s) 217
BisI GCNGC 2 cut(s) 891, 1262
BlsI GCNGC 2 cut(s) 892, 1263
Bme1390I CCNGG 4 cut(s) 333, 341, 462, 1228
Bme18I GGWCC 2 cut(s) 515, 1357
BmgT120I GGNCC 4 cut(s) 58, 515, 1000, 1357
BmiI GGNNCC 6 cut(s) 37, 459, 466, 516, 905, 1359
BmrFI CCNGG 4 cut(s) 333, 341, 462, 1228
BmrI ACTGGG 1 cut(s) 261
BmsI GCATC 1 cut(s) 823
BmuI ACTGGG 1 cut(s) 261
BpiI GAAGAC 1 cut(s) 28
BpmI CTGGAG 3 cut(s) 54, 354, 1140
Bpu10I CCTNAGC 2 cut(s) 658, 672
BpuEI CTTGAG 1 cut(s) 648
BpuMI CCSGG 2 cut(s) 341, 1228
Bsa29I ATCGAT 1 cut(s) 393
BsaHI GRCGYC 2 cut(s) 267, 1096
BsaI GGTCTC 1 cut(s) 330
BsaJI CCNNGG 4 cut(s) 179, 984, 1259, 1361
BsaWI WCCGGW 1 cut(s) 413
BsaXI ACNNNNNCTCC 4 cut(s) 327, 357, 660, 690
Bsc4I CCNNNNNNNGG 6 cut(s) 104, 284, 413, 444, 685, 1234
Bse1I ACTGG 2 cut(s) 256, 1013
Bse21I CCTNAGG 1 cut(s) 684
Bse3DI GCAATG 2 cut(s) 774, 1275
BseBI CCWGG 2 cut(s) 333, 462
BseCI ATCGAT 1 cut(s) 393
BseDI CCNNGG 4 cut(s) 179, 984, 1259, 1361
BseGI GGATG 3 cut(s) 190, 838, 949
BseLI CCNNNNNNNGG 6 cut(s) 104, 284, 413, 444, 685, 1234
BseMI GCAATG 2 cut(s) 774, 1275
BseMII CTCAG 6 cut(s) 237, 513, 672, 686, 1038, 1205
BseNI ACTGG 2 cut(s) 256, 1013
BseRI GAGGAG 3 cut(s) 31, 123, 1179
BseX3I CGGCCG 1 cut(s) 1262
BseXI GCAGC 1 cut(s) 877
Bsh1236I CGCG 1 cut(s) 1261
Bsh1285I CGRYCG 2 cut(s) 393, 1265
BshFI GGCC 4 cut(s) 60, 1002, 1231, 1264
BshNI GGYRCC 1 cut(s) 464
BshVI ATCGAT 1 cut(s) 393
BsiEI CGRYCG 2 cut(s) 393, 1265
BsiSI CCGG 3 cut(s) 340, 414, 1228
BslFI GGGAC 2 cut(s) 1107, 1241
BslI CCNNNNNNNGG 6 cut(s) 104, 284, 413, 444, 685, 1234
BsmAI GTCTC 3 cut(s) 34, 242, 330
BsmBI CGTCTC 1 cut(s) 34
BsmFI GGGAC 2 cut(s) 1107, 1241
BsnI GGCC 4 cut(s) 60, 1002, 1231, 1264
Bso31I GGTCTC 1 cut(s) 330
Bsp1286I GDGCHC 1 cut(s) 906
Bsp1407I TGTACA 1 cut(s) 1272
Bsp143I GATC 2 cut(s) 390, 1062
BspACI CCGC 2 cut(s) 1259, 1261
BspANI GGCC 4 cut(s) 60, 1002, 1231, 1264
BspCNI CTCAG 6 cut(s) 238, 514, 671, 685, 1039, 1204
BspDI ATCGAT 1 cut(s) 393
BspFNI CGCG 1 cut(s) 1261
BspLI GGNNCC 6 cut(s) 37, 459, 466, 516, 905, 1359
BspMI ACCTGC 1 cut(s) 143
BspT107I GGYRCC 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 330
BsrDI GCAATG 2 cut(s) 774, 1275
BsrGI TGTACA 1 cut(s) 1272
BsrI ACTGG 2 cut(s) 256, 1013
BssECI CCNNGG 4 cut(s) 179, 984, 1259, 1361
BssMI GATC 2 cut(s) 390, 1062
BssNI GRCGYC 2 cut(s) 267, 1096
BssT1I CCWWGG 1 cut(s) 1361
Bst2UI CCWGG 2 cut(s) 333, 462
Bst4CI ACNGT 1 cut(s) 454
Bst6I CTCTTC 1 cut(s) 1306
BstACI GRCGYC 2 cut(s) 267, 1096
BstAUI TGTACA 1 cut(s) 1272
BstDEI CTNAG 7 cut(s) 246, 522, 658, 672, 684, 1047, 1191
BstDSI CCRYGG 2 cut(s) 984, 1259
BstF5I GGATG 3 cut(s) 190, 838, 949
BstFNI CGCG 1 cut(s) 1261
BstH2I RGCGCY 1 cut(s) 12
BstHHI GCGC 2 cut(s) 11, 129
BstKTI GATC 2 cut(s) 393, 1065
BstMAI GTCTC 3 cut(s) 34, 242, 330
BstMBI GATC 2 cut(s) 390, 1062
BstMCI CGRYCG 2 cut(s) 393, 1265
BstMWI GCNNNNNNNGC 2 cut(s) 217, 1082
BstNI CCWGG 2 cut(s) 333, 462
BstSCI CCNGG 4 cut(s) 331, 339, 460, 1226
BstSFI CTRYAG 1 cut(s) 564
BstUI CGCG 1 cut(s) 1261
BstV1I GCAGC 1 cut(s) 877
BstV2I GAAGAC 1 cut(s) 28
BstZI CGGCCG 1 cut(s) 1262
Bsu15I ATCGAT 1 cut(s) 393
Bsu36I CCTNAGG 1 cut(s) 684
BsuI GTATCC 2 cut(s) 442, 514
BsuRI GGCC 4 cut(s) 60, 1002, 1231, 1264
BsuTUI ATCGAT 1 cut(s) 393
BtgI CCRYGG 2 cut(s) 984, 1259
BtgZI GCGATG 1 cut(s) 144
BtsCI GGATG 3 cut(s) 190, 838, 949
BtsIMutI CAGTG 1 cut(s) 904
BveI ACCTGC 1 cut(s) 143
CfoI GCGC 2 cut(s) 11, 129
Cfr13I GGNCC 4 cut(s) 58, 515, 1000, 1357
Cfr42I CCGCGG 1 cut(s) 1262
ClaI ATCGAT 1 cut(s) 393
CseI GACGC 2 cut(s) 275, 1322
Csp6I GTAC 3 cut(s) 990, 1170, 1273
CviAII CATG 3 cut(s) 122, 509, 851
CviQI GTAC 3 cut(s) 990, 1170, 1273
DdeI CTNAG 7 cut(s) 246, 522, 658, 672, 684, 1047, 1191
DpnI GATC 2 cut(s) 392, 1064
DpnII GATC 2 cut(s) 390, 1062
EaeI YGGCCR 2 cut(s) 1229, 1262
EagI CGGCCG 1 cut(s) 1262
Eam1104I CTCTTC 1 cut(s) 1306
EarI CTCTTC 1 cut(s) 1306
EclXI CGGCCG 1 cut(s) 1262
Eco130I CCWWGG 1 cut(s) 1361
Eco24I GRGCYC 1 cut(s) 906
Eco31I GGTCTC 1 cut(s) 330
Eco32I GATATC 1 cut(s) 949
Eco47I GGWCC 2 cut(s) 515, 1357
Eco52I CGGCCG 1 cut(s) 1262
Eco81I CCTNAGG 1 cut(s) 684
EcoO109I RGGNCCY 2 cut(s) 1000, 1357
EcoRII CCWGG 2 cut(s) 331, 460
EcoRV GATATC 1 cut(s) 949
EcoT14I CCWWGG 1 cut(s) 1361
EcoT22I ATGCAT 1 cut(s) 838
EcoT38I GRGCYC 1 cut(s) 906
ErhI CCWWGG 1 cut(s) 1361
Esp3I CGTCTC 1 cut(s) 34
FaeI CATG 3 cut(s) 125, 512, 854
FaqI GGGAC 2 cut(s) 1107, 1241
FatI CATG 3 cut(s) 121, 508, 850
FauI CCCGC 1 cut(s) 1266
FauNDI CATATG 1 cut(s) 763
Fnu4HI GCNGC 2 cut(s) 891, 1262
FokI GGATG 3 cut(s) 197, 845, 956
FriOI GRGCYC 1 cut(s) 906
Fsp4HI GCNGC 2 cut(s) 891, 1262
FspBI CTAG 2 cut(s) 402, 611
FspI TGCGCA 1 cut(s) 128
GlaI GCGC 2 cut(s) 10, 128
GluI GCNGC 2 cut(s) 891, 1262
GsuI CTGGAG 3 cut(s) 54, 354, 1140
HaeII RGCGCY 1 cut(s) 12
HaeIII GGCC 4 cut(s) 60, 1002, 1231, 1264
HapII CCGG 3 cut(s) 340, 414, 1228
HgaI GACGC 2 cut(s) 275, 1322
HhaI GCGC 2 cut(s) 11, 129
Hin1I GRCGYC 2 cut(s) 267, 1096
Hin1II CATG 3 cut(s) 125, 512, 854
Hin6I GCGC 2 cut(s) 9, 127
HinP1I GCGC 2 cut(s) 9, 127
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HindIII AAGCTT 1 cut(s) 812
HinfI GANTC 7 cut(s) 24, 290, 410, 583, 703, 749, 879
HpaII CCGG 3 cut(s) 340, 414, 1228
HphI GGTGA 4 cut(s) 131, 299, 506, 1259
Hpy166II GTNNAC 2 cut(s) 265, 1324
Hpy188I TCNGA 8 cut(s) 71, 107, 173, 180, 247, 523, 723, 823
Hpy188III TCNNGA 6 cut(s) 33, 322, 388, 407, 665, 876
Hpy8I GTNNAC 2 cut(s) 265, 1324
Hpy99I CGWCG 1 cut(s) 1338
HpyAV CCTTC 4 cut(s) 57, 437, 1051, 1075
HpyCH4III ACNGT 1 cut(s) 454
HpyCH4IV ACGT 1 cut(s) 1096
HpyCH4V TGCA 5 cut(s) 80, 767, 836, 929, 1213
HpyF10VI GCNNNNNNNGC 2 cut(s) 217, 1082
HpyF3I CTNAG 7 cut(s) 246, 522, 658, 672, 684, 1047, 1191
HpySE526I ACGT 1 cut(s) 1096
Hsp92I GRCGYC 2 cut(s) 267, 1096
Hsp92II CATG 3 cut(s) 125, 512, 854
HspAI GCGC 2 cut(s) 9, 127
KspI CCGCGG 1 cut(s) 1262
Kzo9I GATC 2 cut(s) 390, 1062
LmnI GCTCC 4 cut(s) 35, 228, 681, 909
Lsp1109I GCAGC 1 cut(s) 877
LweI GCATC 1 cut(s) 823
MaeI CTAG 2 cut(s) 402, 611
MaeII ACGT 1 cut(s) 1096
MaeIII GTNAC 3 cut(s) 385, 613, 1222
MalI GATC 2 cut(s) 392, 1064
MboI GATC 2 cut(s) 390, 1062
MboII GAAGA 5 cut(s) 33, 234, 337, 509, 1323
MfeI CAATTG 2 cut(s) 360, 1104
MhlI GDGCHC 1 cut(s) 906
MluCI AATT 8 cut(s) 360, 369, 420, 573, 802, 1039, 1066, 1104
MlyI GAGTC 1 cut(s) 18
MmeI TCCRAC 3 cut(s) 94, 169, 1222
Mph1103I ATGCAT 1 cut(s) 838
MseI TTAA 2 cut(s) 924, 1341
MspA1I CMGCKG 1 cut(s) 1261
MspI CCGG 3 cut(s) 340, 414, 1228
MspR9I CCNGG 4 cut(s) 333, 341, 462, 1228
MunI CAATTG 2 cut(s) 360, 1104
MvaI CCWGG 2 cut(s) 333, 462
MvnI CGCG 1 cut(s) 1261
MwoI GCNNNNNNNGC 2 cut(s) 217, 1082
NciI CCSGG 2 cut(s) 341, 1228
NdeI CATATG 1 cut(s) 763
NdeII GATC 2 cut(s) 390, 1062
NlaIII CATG 3 cut(s) 125, 512, 854
NlaIV GGNNCC 6 cut(s) 37, 459, 466, 516, 905, 1359
NmuCI GTSAC 2 cut(s) 385, 1222
NsbI TGCGCA 1 cut(s) 128
NsiI ATGCAT 1 cut(s) 838
PfeI GAWTC 6 cut(s) 290, 410, 583, 703, 749, 879
PkrI GCNGC 2 cut(s) 892, 1263
Ple19I CGATCG 1 cut(s) 393
PleI GAGTC 1 cut(s) 18
PpsI GAGTC 1 cut(s) 18
PpuMI RGGWCCY 1 cut(s) 1357
PshBI ATTAAT 1 cut(s) 924
PsiI TTATAA 1 cut(s) 1166
Psp5II RGGWCCY 1 cut(s) 1357
Psp6I CCWGG 2 cut(s) 331, 460
PspGI CCWGG 2 cut(s) 331, 460
PspN4I GGNNCC 6 cut(s) 37, 459, 466, 516, 905, 1359
PspPI GGNCC 4 cut(s) 58, 515, 1000, 1357
PspPPI RGGWCCY 1 cut(s) 1357
PvuI CGATCG 1 cut(s) 393
RsaI GTAC 3 cut(s) 991, 1171, 1274
RsaNI GTAC 3 cut(s) 990, 1170, 1273
SacII CCGCGG 1 cut(s) 1262
SaqAI TTAA 2 cut(s) 924, 1341
SatI GCNGC 2 cut(s) 891, 1262
Sau3AI GATC 2 cut(s) 390, 1062
Sau96I GGNCC 4 cut(s) 58, 515, 1000, 1357
SchI GAGTC 1 cut(s) 18
ScrFI CCNGG 4 cut(s) 333, 341, 462, 1228
SduI GDGCHC 1 cut(s) 906
SfaNI GCATC 1 cut(s) 823
SfcI CTRYAG 1 cut(s) 564
Sfr303I CCGCGG 1 cut(s) 1262
SgrBI CCGCGG 1 cut(s) 1262
SinI GGWCC 2 cut(s) 515, 1357
SmlI CTYRAG 1 cut(s) 663
SmoI CTYRAG 1 cut(s) 663
Sse9I AATT 8 cut(s) 360, 369, 420, 573, 802, 1039, 1066, 1104
SsiI CCGC 2 cut(s) 1259, 1261
SspMI CTAG 2 cut(s) 402, 611
StyD4I CCNGG 4 cut(s) 331, 339, 460, 1226
StyI CCWWGG 1 cut(s) 1361
TaaI ACNGT 1 cut(s) 454
TaiI ACGT 1 cut(s) 1099
TaqI TCGA 2 cut(s) 50, 393
TasI AATT 8 cut(s) 360, 369, 420, 573, 802, 1039, 1066, 1104
TatI WGTACW 1 cut(s) 1272
TauI GCSGC 1 cut(s) 1264
TfiI GAWTC 6 cut(s) 290, 410, 583, 703, 749, 879
Tru1I TTAA 2 cut(s) 924, 1341
Tru9I TTAA 2 cut(s) 924, 1341
TscAI CASTG 1 cut(s) 904
TseFI GTSAC 2 cut(s) 385, 1222
TseI GCWGC 1 cut(s) 890
Tsp45I GTSAC 2 cut(s) 385, 1222
TspDTI ATGAA 8 cut(s) 147, 369, 456, 801, 824, 871, 1052, 1116
TspGWI ACGGA 2 cut(s) 715, 742
TspRI CASTG 1 cut(s) 904
VpaK11BI GGWCC 2 cut(s) 515, 1357
VspI ATTAAT 1 cut(s) 924
XapI RAATTY 1 cut(s) 802
XspI CTAG 2 cut(s) 402, 611
ZraI GACGTC 1 cut(s) 1097
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.