Rh2AG507600

udp-glucuronic acid decarboxylase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
73141444 .. 73146421
4978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG507600.1

Sequence Viewer

Length: 1308 bp
ATGGGTCTGGACTTTGATAGAGTGAAGGGGACTATTCCAGTTCTGCATGAATTTCAGCAGTTGGGTTATAATAGGTGTATCAGAATTTTAGTGATATTTACACAGTGGGGATGTATCAATCTAGAGCTTGGATGTGTGTGGCCGTTTTGGCCGTGTGCTTGTGCTGGTCTTCACTACAAGCTGGAGCACAAGCGCAGAATATTACCAACCCTGCAAATGTCTTTGATTAGGAACTTCTGCACTGAGTTTGGGAGAACTGGAACATTATTAACTATAGGAGAAAAGCTGAGAGAAAACATCGTCTGGAACTCACATCTCCATAAGAAAGTGAGGAATAGACTTGATGAAAAGGAAACTCTTGACTTGACACACCCACGAGTTGCCTGTTTGGAAAGTAAAATCAGGGAAAAGGTCAGGAGCAAGTTGAATGAACGCTGGAAGCATTGGAAGTCTAAGTTGAGCAAGAAATGGTATAAACCATTCAAGAATAGTCCCCTTAGGTTTCACAAACCTGATGATGATCGTGTTGATGAGGACCAATGGAAAGTGTTCGTTGCAAACAAAGACAAGAAGAAGCATCAGAGGATGGTGACCATCAACAAGAGGAACCGGTCTCAAAAGAGAATGAATCAGTCAACAGGGACACGAACCTATGCTAGTTTGGCTCATGAATATGAACTTCTGCATGGTAAAGAGCCAGATAGATGGGAATTGTTCAAATTAACACATCGAAAGGCAGGAACTCAAGAGCCAATTGATGCAGCAAGTGCAAAAGCAATTGCGGATTTTGAAGAAGCCGAACAAAAGAGGCTAAGCATGAATGTTGACATCACTGCTCCAGAAATTCGTGAAGAGATGTATGCTGAGGTTCTTGGTAAGGAGAAGGGAAACCGAGTAAGGGGTCTTGGAGCTGGGGTCACTTGGGATGAAGTTCCTGGAATTCATGTGGAAGAGCGAGGTGTTTCAAAGGAAGTGCAACTCTTGCGAGAGCGATTAGAAGCACAAACCAAAGAGGCACAAGAGAGGGAAGCACGTCTGATGGATGAATTACAAAGGAAAATGGTTGAACAAACAAAAAAAATGGAAGAAATGTTTGAAGTAAGGTGTGTAGGCATGGCGGTCCAAAAAATGGGAGAGTTGTTTAAACAGTGTGGAATATCGGTGGATACACAAGAAGATATGGAGCAAACAATGTCTCAATTTGCTCATAACATTTCTCAAAGGCCGTCAAATGTGATTTTTTCCCCAAATGATGATGTTTACCGCCCCACATTGCCATTTGAATGTTCTGATATGCAGACGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

435

Amino Acids

51.06

Weight (kDa)

8.99

Isoelectric Point (pI)

45.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 177 - 307 8.2e-19 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000040)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00150 FvH4_2g13531 FvH4_2g21543 FvH4_3g32800 FvH4_3g32802 FvH4_4g00091 FvH4_4g00092 FvH4_5g22070 FvH4_5g31391 FvH4_6g11351 FvH4_6g23430 FvH4_6g23672 FvH4_6g52753
malus_domestica MD03G1101500.v1.1 MD08G1234800.v1.1
pyrus_communis pycom07g24860 pycom09g07860 pycom10g09330 pycom10g15360 pycom11g01600 pycom11g13460 pycom13g15580
rosa_chinensis RchiOBHm_Chr1g0332021 RchiOBHm_Chr2g0095801 RchiOBHm_Chr2g0111771 RchiOBHm_Chr2g0127541 RchiOBHm_Chr2g0136581 RchiOBHm_Chr2g0136591 RchiOBHm_Chr2g0143311 RchiOBHm_Chr2g0145131 RchiOBHm_Chr2g0151391 RchiOBHm_Chr3g0468771 RchiOBHm_Chr3g0473281 RchiOBHm_Chr3g0481961 RchiOBHm_Chr4g0393741 RchiOBHm_Chr4g0397391 RchiOBHm_Chr4g0435991 RchiOBHm_Chr5g0015951 RchiOBHm_Chr5g0016651 RchiOBHm_Chr5g0039191 RchiOBHm_Chr5g0039211 RchiOBHm_Chr6g0254441 RchiOBHm_Chr6g0260911 RchiOBHm_Chr6g0274501 RchiOBHm_Chr6g0274511 RchiOBHm_Chr7g0184951 RchiOBHm_Chr7g0201701 RchiOBHm_Chr7g0201721 RchiOBHm_Chr7g0201731 RchiOBHm_Chr7g0234921 RchiOBHm_Chr7g0237841
rosa_laevigata RLG00000001204 RLG00000001230 RLG00000001341 RLG00000001513 RLG00000001971 RLG00000002177 RLG00000002360 RLG00000003112 RLG00000003130 RLG00000003854 RLG00000008209 RLG00000008322 RLG00000008412 RLG00000008524 RLG00000009491 RLG00000009908 RLG00000011823 RLG00000013252 RLG00000013782 RLG00000013944 RLG00000014480 RLG00000019084 RLG00000019544 RLG00000019751 RLG00000020093 RLG00000020094 RLG00000020551 RLG00000020838 RLG00000020982 RLG00000021059 RLG00000022067 RLG00000022604 RLG00000022632 RLG00000022849 RLG00000023962 RLG00000025767 RLG00000026838 RLG00000027291 RLG00000028131 RLG00000028210 RLG00000028834 RLG00000030169 RLG00000031271 RLG00000032327 RLG00000033996 RLG00000034546 RLG00000034654 RLG00000034810 RLG00000035087 RLG00000036782
rosa_multiflora Rmu_co8330487.1_g000001 Rmu_co8359977.1_g000001 Rmu_co8445341.1_g000001 Rmu_sc0000141.1_g000003 Rmu_sc0000353.1_g000018 Rmu_sc0000740.1_g000017 Rmu_sc0000744.1_g000138 Rmu_sc0000813.1_g000014 Rmu_sc0000908.1_g000003 Rmu_sc0000999.1_g000014 Rmu_sc0001103.1_g000001 Rmu_sc0001248.1_g000013 Rmu_sc0001282.1_g000021 Rmu_sc0001293.1_g000018 Rmu_sc0001608.1_g000015 Rmu_sc0001616.1_g000060 Rmu_sc0001851.1_g000013 Rmu_sc0001990.1_g000003 Rmu_sc0002138.1_g000002 Rmu_sc0002200.1_g000021 Rmu_sc0002230.1_g000029 Rmu_sc0002230.1_g000030 Rmu_sc0002702.1_g000017 Rmu_sc0002806.1_g000010 Rmu_sc0002809.1_g000023 Rmu_sc0002869.1_g000005 Rmu_sc0003156.1_g000027 Rmu_sc0003368.1_g000018 Rmu_sc0003642.1_g000007 Rmu_sc0003653.1_g000004 Rmu_sc0003791.1_g000008 Rmu_sc0003804.1_g000013 Rmu_sc0004015.1_g000022 Rmu_sc0004230.1_g000017 Rmu_sc0004368.1_g000011 Rmu_sc0004529.1_g000011 Rmu_sc0004540.1_g000011 Rmu_sc0005008.1_g000014 Rmu_sc0005171.1_g000001 Rmu_sc0005212.1_g000013 Rmu_sc0005947.1_g000003 Rmu_sc0006317.1_g000026 Rmu_sc0006578.1_g000005 Rmu_sc0006993.1_g000001 Rmu_sc0007442.1_g000002 Rmu_sc0007442.1_g000004 Rmu_sc0007876.1_g000004 Rmu_sc0007876.1_g000005 Rmu_sc0009624.1_g000004 Rmu_sc0009742.1_g000005 Rmu_sc0010306.1_g000007 Rmu_sc0011745.1_g000008 Rmu_sc0011800.1_g000003 Rmu_sc0012369.1_g000003 Rmu_sc0012787.1_g000003 Rmu_sc0012989.1_g000001 Rmu_sc0013416.1_g000003 Rmu_sc0021155.1_g000001 Rmu_sc0022372.1_g000001 Rmu_sc0023106.1_g000001 Rmu_sc0023684.1_g000003 Rmu_sc0023684.1_g000004 Rmu_sc0026897.1_g000001 Rmu_sc0027278.1_g000001 Rmu_sc0028533.1_g000001 Rmu_sc0028533.1_g000003 Rmu_sc0038440.1_g000001
rosa_roxburghii Rroxscaffold_1G00031730 Rroxscaffold_1G00033690 Rroxscaffold_1G00073100 Rroxscaffold_2G00079640 Rroxscaffold_2G00089760 Rroxscaffold_2G00091520 Rroxscaffold_2G00112420 Rroxscaffold_2G00115720 Rroxscaffold_2G00116170 Rroxscaffold_2G00116180 Rroxscaffold_2G00152590 Rroxscaffold_2G00155940 Rroxscaffold_3G00220010 Rroxscaffold_3G00234940 Rroxscaffold_3G00235250 Rroxscaffold_3G00237510 Rroxscaffold_3G00250950 Rroxscaffold_3G00250960 Rroxscaffold_3G00262030 Rroxscaffold_4G00299560 Rroxscaffold_4G00306000 Rroxscaffold_4G00311350 Rroxscaffold_4G00318530 Rroxscaffold_4G00329140 Rroxscaffold_5G00342020 Rroxscaffold_5G00350770 Rroxscaffold_5G00354620 Rroxscaffold_5G00354630 Rroxscaffold_5G00361180 Rroxscaffold_5G00377270 Rroxscaffold_6G00397870 Rroxscaffold_6G00397960 Rroxscaffold_6G00407290 Rroxscaffold_6G00408690 Rroxscaffold_6G00421900 Rroxscaffold_6G00421910 Rroxscaffold_7G00181630 Rroxscaffold_7G00182330 Rroxscaffold_7G00182340 Rroxscaffold_7G00212590 Rroxscaffold_7G00214060 Rroxscaffold_7G00214070 Rroxscaffold_7G00215940
rosa_rugosa Rorug01G0052800 Rorug01G0052800 Rorug01G0075200 Rorug01G0090500 Rorug01G0091500 Rorug01G0106000 Rorug01G0309300 Rorug01G0309400.1 Rorug02G0092000 Rorug02G0128200 Rorug02G0152800 Rorug02G0366100 Rorug02G0401500 Rorug02G0465600 Rorug02G0474400 Rorug03G0322500 Rorug04G0044000 Rorug04G0044100 Rorug04G0064800.1 Rorug04G0077400 Rorug04G0094800 Rorug04G0094800 Rorug04G0111400 Rorug04G0137800 Rorug04G0137900 Rorug04G0138000 Rorug04G0138000 Rorug04G0446200 Rorug05G0090600 Rorug05G0239900 Rorug05G0284400 Rorug05G0534400 Rorug05G0561600 Rorug06G0098100 Rorug06G0098100 Rorug06G0134500 Rorug06G0238500 Rorug06G0238600 Rorug07G0228900 Rorug07G0229000 Rorug07G0291600 Rorug07G0291700
rosa_samantha Rh1AG082200 Rh1AG129200 Rh1AG131500 Rh1AG159900 Rh1AG330800 Rh1AG408400 Rh1BG089600 Rh1CG086000 Rh1CG149200 Rh1CG405600 Rh1DG008200 Rh1DG015800 Rh1DG068000 Rh1DG118400 Rh1DG122500 Rh1DG202400 Rh1DG202500 Rh1DG266300 Rh1DG266400 Rh1DG287400 Rh1DG314700 Rh1DG314800 Rh2AG128400 Rh2AG128500 Rh2AG291000 Rh2AG347900 Rh2AG350700 Rh2AG415100 Rh2AG417200 Rh2AG497700 Rh2AG505000 Rh2AG507600 Rh2BG131300 Rh2BG233900 Rh2BG291700 Rh2BG291800 Rh2BG302700 Rh2BG302800 Rh2BG334700 Rh2BG334900 Rh2BG347000 Rh2BG347800 Rh2BG357100 Rh2BG528200 Rh2BG528300 Rh2BG603700 Rh2CG032300 Rh2CG034300 Rh2CG232600 Rh2CG483700 Rh2DG077400 Rh2DG103100 Rh2DG103200 Rh2DG287000 Rh2DG287200 Rh2DG375000 Rh2DG382700 Rh2DG537400 Rh2DG602900 Rh2DG603000 Rh3AG080800 Rh3AG217300 Rh3AG321800 Rh3BG082700 Rh3BG082800 Rh3BG168600 Rh3BG185900 Rh3BG224400 Rh3BG250500 Rh3BG260700 Rh3BG351300 Rh3BG353600 Rh3BG353700 Rh3CG082900 Rh3CG083000 Rh3CG176200 Rh3CG176300 Rh3CG219400 Rh3CG219500 Rh3CG254600 Rh3CG254700 Rh3CG256000 Rh3CG256100 Rh3CG257400 Rh3CG356200 Rh3CG356300 Rh3DG084300 Rh4AG030500 Rh4BG132300 Rh4BG139800 Rh4BG140000 Rh4CG027200 Rh4CG033100 Rh4CG033200 Rh4CG069600 Rh4CG103300 Rh4CG322600 Rh4DG028500 Rh4DG081000 Rh4DG190200 Rh4DG193500 Rh4DG212900 Rh4DG303900 Rh4DG342900 Rh5AG131000 Rh5AG166800 Rh5AG167000 Rh5AG201600 Rh5AG372200 Rh5AG372300 Rh5AG417900 Rh5BG082500 Rh5BG171200 Rh5BG171300 Rh5BG180300 Rh5BG194400 Rh5BG302800 Rh5BG343300 Rh5BG402700 Rh5BG428500 Rh5CG190700 Rh5CG190800 Rh5CG219100 Rh5CG451900 Rh5DG175200 Rh5DG175400 Rh5DG177000 Rh5DG177100 Rh5DG356000 Rh5DG356100 Rh5DG493500 Rh6AG006700 Rh6AG051700 Rh6AG064100 Rh6AG064200 Rh6AG064500 Rh6AG092800 Rh6AG152000 Rh6AG152100 Rh6AG291900 Rh6AG419000 Rh6AG465900 Rh6AG466000 Rh6BG125000 Rh6BG160600 Rh6BG161800 Rh6BG359100 Rh6BG359200 Rh6CG071400 Rh6CG071500 Rh6CG103500 Rh6CG103600 Rh6CG117200 Rh6CG123700 Rh6CG123800 Rh6CG156600 Rh6CG192500 Rh6CG208600 Rh6CG208700 Rh6CG365200 Rh6DG146200 Rh6DG146800 Rh6DG193200 Rh6DG193300 Rh6DG193400 Rh6DG349200 Rh7AG251100 Rh7AG259300 Rh7AG425100 Rh7BG262700 Rh7BG262900 Rh7BG369500 Rh7CG107400 Rh7CG107500 Rh7CG257400 Rh7CG267300 Rh7DG070500 Rh7DG105000 Rh7DG198500 Rh7DG291300 Rh7DG480600
rosa_wichuraiana Rw2G027920 Rw3G014750 Rw3G021490 Rw4G001910 Rw6G013120 Rw6G020040 Rw6G022930 Rw6G041900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 69
AccB7I CCANNNNNTGG 1 cut(s) 1129
AciI CCGC 3 cut(s) 782, 1118, 1264
AcoI YGGCCR 2 cut(s) 140, 149
AcsI RAATTY 4 cut(s) 50, 84, 843, 939
AfiI CCNNNNNNNGG 2 cut(s) 898, 1129
AgeI ACCGGT 1 cut(s) 609
AgsI TTSAA 8 cut(s) 427, 484, 718, 791, 966, 1067, 1097, 1283
AjiI CACGTC 1 cut(s) 1034
AjnI CCWGG 1 cut(s) 934
AluBI AGCT 4 cut(s) 127, 181, 286, 911
AluI AGCT 4 cut(s) 127, 181, 286, 911
Alw21I GWGCWC 1 cut(s) 189
Alw26I GTCTC 2 cut(s) 618, 1200
AoxI GGCC 3 cut(s) 140, 149, 1223
ApeKI GCWGC 1 cut(s) 761
ApoI RAATTY 4 cut(s) 50, 84, 843, 939
AsiGI ACCGGT 1 cut(s) 609
Asp700I GAANNNNTTC 1 cut(s) 548
AspLEI GCGC 1 cut(s) 195
AspS9I GGNCC 2 cut(s) 535, 1120
AsuHPI GGTGA 1 cut(s) 601
AvaII GGWCC 2 cut(s) 535, 1120
AxyI CCTNAGG 1 cut(s) 497
BauI CACGAG 1 cut(s) 375
BbsI GAAGAC 1 cut(s) 161
Bbv12I GWGCWC 1 cut(s) 189
BbvCI CCTCAGC 1 cut(s) 864
BbvI GCAGC 1 cut(s) 773
BccI CCATC 4 cut(s) 580, 602, 699, 1033
BceAI ACGGC 3 cut(s) 127, 136, 1210
BciT130I CCWGG 1 cut(s) 936
BciVI GTATCC 1 cut(s) 1159
BcoDI GTCTC 2 cut(s) 618, 1200
BfaI CTAG 2 cut(s) 122, 657
BfmI CTRYAG 1 cut(s) 273
BfuI GTATCC 1 cut(s) 1159
BglI GCCNNNNNGGC 1 cut(s) 148
BisI GCNGC 1 cut(s) 762
BlpI GCTNAGC 1 cut(s) 812
BlsI GCNGC 1 cut(s) 763
Bme1390I CCNGG 1 cut(s) 936
Bme18I GGWCC 2 cut(s) 535, 1120
BmgBI CACGTC 1 cut(s) 1034
BmgT120I GGNCC 2 cut(s) 535, 1120
BmiI GGNNCC 1 cut(s) 608
BmrFI CCNGG 1 cut(s) 936
BmsI GCATC 2 cut(s) 586, 748
BpiI GAAGAC 1 cut(s) 161
BpmI CTGGAG 2 cut(s) 203, 822
Bpu10I CCTNAGC 1 cut(s) 864
Bpu1102I GCTNAGC 1 cut(s) 812
BpuEI CTTGAG 1 cut(s) 729
BsaBI GATNNNNATC 1 cut(s) 519
BsaI GGTCTC 1 cut(s) 618
BsaWI WCCGGW 1 cut(s) 609
BsaXI ACNNNNNCTCC 2 cut(s) 900, 930
Bsc4I CCNNNNNNNGG 2 cut(s) 898, 1129
Bse118I RCCGGY 1 cut(s) 609
Bse1I ACTGG 2 cut(s) 38, 262
Bse21I CCTNAGG 1 cut(s) 497
Bse3DI GCAATG 1 cut(s) 1271
Bse8I GATNNNNATC 1 cut(s) 519
BseBI CCWGG 1 cut(s) 936
BseGI GGATG 5 cut(s) 116, 137, 591, 931, 1048
BseJI GATNNNNATC 1 cut(s) 519
BseLI CCNNNNNNNGG 2 cut(s) 898, 1129
BseMI GCAATG 1 cut(s) 1271
BseMII CTCAG 3 cut(s) 234, 278, 855
BseNI ACTGG 2 cut(s) 38, 262
BseXI GCAGC 1 cut(s) 773
BseYI CCCAGC 1 cut(s) 911
BsgI GTGCAG 1 cut(s) 223
BshFI GGCC 3 cut(s) 142, 151, 1225
BshTI ACCGGT 1 cut(s) 609
BsiHKAI GWGCWC 1 cut(s) 189
BsiSI CCGG 1 cut(s) 610
BslFI GGGAC 3 cut(s) 43, 477, 655
BslI CCNNNNNNNGG 2 cut(s) 898, 1129
BsmAI GTCTC 2 cut(s) 618, 1200
BsmFI GGGAC 3 cut(s) 43, 477, 655
BsnI GGCC 3 cut(s) 142, 151, 1225
Bso31I GGTCTC 1 cut(s) 618
Bsp1286I GDGCHC 1 cut(s) 189
Bsp143I GATC 1 cut(s) 520
Bsp1720I GCTNAGC 1 cut(s) 812
BspACI CCGC 3 cut(s) 782, 1118, 1264
BspANI GGCC 3 cut(s) 142, 151, 1225
BspCNI CTCAG 3 cut(s) 235, 279, 856
BspHI TCATGA 1 cut(s) 667
BspLI GGNNCC 1 cut(s) 608
BspQI GCTCTTC 1 cut(s) 945
BspTNI GGTCTC 1 cut(s) 618
BsrDI GCAATG 1 cut(s) 1271
BsrFI RCCGGY 1 cut(s) 609
BsrI ACTGG 2 cut(s) 38, 262
BssAI RCCGGY 1 cut(s) 609
BssMI GATC 1 cut(s) 520
BssSI CACGAG 1 cut(s) 375
Bst2BI CACGAG 1 cut(s) 375
Bst2UI CCWGG 1 cut(s) 936
Bst4CI ACNGT 2 cut(s) 105, 1149
Bst6I CTCTTC 2 cut(s) 846, 945
BstAPI GCANNNNNTGC 2 cut(s) 767, 982
BstDEI CTNAG 6 cut(s) 243, 287, 453, 497, 812, 864
BstEII GGTNACC 1 cut(s) 589
BstF5I GGATG 5 cut(s) 116, 137, 591, 931, 1048
BstHHI GCGC 1 cut(s) 195
BstKTI GATC 1 cut(s) 523
BstMAI GTCTC 2 cut(s) 618, 1200
BstMBI GATC 1 cut(s) 520
BstMWI GCNNNNNNNGC 4 cut(s) 148, 662, 767, 982
BstNI CCWGG 1 cut(s) 936
BstPI GGTNACC 1 cut(s) 589
BstSCI CCNGG 1 cut(s) 934
BstSFI CTRYAG 1 cut(s) 273
BstV1I GCAGC 1 cut(s) 773
BstV2I GAAGAC 1 cut(s) 161
BstXI CCANNNNNNTGG 1 cut(s) 705
Bsu36I CCTNAGG 1 cut(s) 497
BsuI GTATCC 1 cut(s) 1159
BsuRI GGCC 3 cut(s) 142, 151, 1225
BtrI CACGTC 1 cut(s) 1034
BtsCI GGATG 5 cut(s) 116, 137, 591, 931, 1048
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 4 cut(s) 110, 240, 831, 1154
CciI TCATGA 1 cut(s) 667
CfoI GCGC 1 cut(s) 195
Cfr10I RCCGGY 1 cut(s) 609
Cfr13I GGNCC 2 cut(s) 535, 1120
CspAI ACCGGT 1 cut(s) 609
CviAII CATG 6 cut(s) 47, 668, 686, 817, 944, 1114
DdeI CTNAG 6 cut(s) 243, 287, 453, 497, 812, 864
DpnI GATC 1 cut(s) 522
DpnII GATC 1 cut(s) 520
DraI TTTAAA 1 cut(s) 1144
EaeI YGGCCR 2 cut(s) 140, 149
Eam1104I CTCTTC 2 cut(s) 846, 945
EarI CTCTTC 2 cut(s) 846, 945
Eco31I GGTCTC 1 cut(s) 618
Eco47I GGWCC 2 cut(s) 535, 1120
Eco81I CCTNAGG 1 cut(s) 497
Eco91I GGTNACC 1 cut(s) 589
EcoO65I GGTNACC 1 cut(s) 589
EcoRI GAATTC 1 cut(s) 939
EcoRII CCWGG 1 cut(s) 934
FaeI CATG 6 cut(s) 50, 671, 689, 820, 947, 1117
FaqI GGGAC 3 cut(s) 43, 477, 655
FatI CATG 6 cut(s) 46, 667, 685, 816, 943, 1113
Fnu4HI GCNGC 1 cut(s) 762
FokI GGATG 5 cut(s) 123, 144, 598, 938, 1055
Fsp4HI GCNGC 1 cut(s) 762
FspBI CTAG 2 cut(s) 122, 657
GlaI GCGC 1 cut(s) 194
GluI GCNGC 1 cut(s) 762
GsaI CCCAGC 1 cut(s) 915
GsuI CTGGAG 2 cut(s) 203, 822
HaeIII GGCC 3 cut(s) 142, 151, 1225
HapII CCGG 1 cut(s) 610
HhaI GCGC 1 cut(s) 195
Hin1II CATG 6 cut(s) 50, 671, 689, 820, 947, 1117
Hin6I GCGC 1 cut(s) 193
HinP1I GCGC 1 cut(s) 193
HincII GTYRAC 2 cut(s) 636, 826
HindII GTYRAC 2 cut(s) 636, 826
HinfI GANTC 1 cut(s) 628
HpaII CCGG 1 cut(s) 610
HphI GGTGA 1 cut(s) 601
Hpy166II GTNNAC 3 cut(s) 636, 826, 1261
Hpy188I TCNGA 4 cut(s) 83, 582, 1038, 1291
Hpy8I GTNNAC 3 cut(s) 636, 826, 1261
HpyAV CCTTC 2 cut(s) 19, 877
HpyCH4III ACNGT 2 cut(s) 105, 1149
HpyCH4IV ACGT 1 cut(s) 1033
HpyCH4V TGCA 9 cut(s) 46, 214, 240, 557, 685, 761, 770, 976, 1297
HpyF10VI GCNNNNNNNGC 4 cut(s) 148, 662, 767, 982
HpyF3I CTNAG 6 cut(s) 243, 287, 453, 497, 812, 864
HpySE526I ACGT 1 cut(s) 1033
Hsp92II CATG 6 cut(s) 50, 671, 689, 820, 947, 1117
HspAI GCGC 1 cut(s) 193
Kzo9I GATC 1 cut(s) 520
LguI GCTCTTC 1 cut(s) 945
LmnI GCTCC 5 cut(s) 184, 417, 841, 908, 1183
Lsp1109I GCAGC 1 cut(s) 773
LweI GCATC 2 cut(s) 586, 748
MaeI CTAG 2 cut(s) 122, 657
MaeII ACGT 1 cut(s) 1033
MaeIII GTNAC 2 cut(s) 589, 916
MalI GATC 1 cut(s) 522
MboI GATC 1 cut(s) 520
MboII GAAGA 7 cut(s) 161, 583, 803, 863, 962, 1097, 1187
MfeI CAATTG 2 cut(s) 753, 777
MhlI GDGCHC 1 cut(s) 189
MnlI CCTC 9 cut(s) 324, 526, 576, 597, 801, 859, 950, 1006, 1017
MroXI GAANNNNTTC 1 cut(s) 548
MseI TTAA 3 cut(s) 269, 722, 1143
MslI CAYNNNNRTG 2 cut(s) 672, 1282
MspI CCGG 1 cut(s) 610
MspR9I CCNGG 1 cut(s) 936
MssI GTTTAAAC 1 cut(s) 1144
MunI CAATTG 2 cut(s) 753, 777
MvaI CCWGG 1 cut(s) 936
MwoI GCNNNNNNNGC 4 cut(s) 148, 662, 767, 982
NdeII GATC 1 cut(s) 520
NlaIII CATG 6 cut(s) 50, 671, 689, 820, 947, 1117
NlaIV GGNNCC 1 cut(s) 608
NmuCI GTSAC 2 cut(s) 589, 916
PagI TCATGA 1 cut(s) 667
PciSI GCTCTTC 1 cut(s) 945
PdmI GAANNNNTTC 1 cut(s) 548
PfeI GAWTC 1 cut(s) 628
PflMI CCANNNNNTGG 1 cut(s) 1129
PfoI TCCNGGA 1 cut(s) 934
PinAI ACCGGT 1 cut(s) 609
PkrI GCNGC 1 cut(s) 763
PmeI GTTTAAAC 1 cut(s) 1144
PsiI TTATAA 1 cut(s) 69
Psp6I CCWGG 1 cut(s) 934
PspEI GGTNACC 1 cut(s) 589
PspFI CCCAGC 1 cut(s) 911
PspGI CCWGG 1 cut(s) 934
PspN4I GGNNCC 1 cut(s) 608
PspPI GGNCC 2 cut(s) 535, 1120
RseI CAYNNNNRTG 2 cut(s) 672, 1282
SapI GCTCTTC 1 cut(s) 945
SaqAI TTAA 3 cut(s) 269, 722, 1143
SatI GCNGC 1 cut(s) 762
Sau3AI GATC 1 cut(s) 520
Sau96I GGNCC 2 cut(s) 535, 1120
ScrFI CCNGG 1 cut(s) 936
SduI GDGCHC 1 cut(s) 189
SfaNI GCATC 2 cut(s) 586, 748
SfcI CTRYAG 1 cut(s) 273
SfiI GGCCNNNNNGGCC 1 cut(s) 148
SinI GGWCC 2 cut(s) 535, 1120
SmiMI CAYNNNNRTG 2 cut(s) 672, 1282
SmlI CTYRAG 1 cut(s) 744
SmoI CTYRAG 1 cut(s) 744
SsiI CCGC 3 cut(s) 782, 1118, 1264
SspI AATATT 1 cut(s) 201
SspMI CTAG 2 cut(s) 122, 657
StyD4I CCNGG 1 cut(s) 934
TaaI ACNGT 2 cut(s) 105, 1149
TaiI ACGT 1 cut(s) 1036
TaqI TCGA 1 cut(s) 730
TfiI GAWTC 1 cut(s) 628
Tru1I TTAA 3 cut(s) 269, 722, 1143
Tru9I TTAA 3 cut(s) 269, 722, 1143
TscAI CASTG 4 cut(s) 110, 247, 838, 1154
TseFI GTSAC 2 cut(s) 589, 916
TseI GCWGC 1 cut(s) 761
Tsp45I GTSAC 2 cut(s) 589, 916
TspRI CASTG 4 cut(s) 110, 247, 838, 1154
Van91I CCANNNNNTGG 1 cut(s) 1129
VpaK11BI GGWCC 2 cut(s) 535, 1120
XapI RAATTY 4 cut(s) 50, 84, 843, 939
XbaI TCTAGA 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 548
XspI CTAG 2 cut(s) 122, 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.