Transposase family tnp2
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 317 - 386 | 2.9e-09 | Plant transposase (Ptta/En/Spm family) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 717 |
| Acc36I | ACCTGC | 1 cut(s) | 68 |
| AccI | GTMKAC | 1 cut(s) | 1594 |
| AccII | CGCG | 1 cut(s) | 1212 |
| AciI | CCGC | 5 cut(s) | 33, 686, 727, 1210, 1335 |
| AclWI | GGATC | 2 cut(s) | 810, 1597 |
| AcsI | RAATTY | 2 cut(s) | 668, 877 |
| AcuI | CTGAAG | 2 cut(s) | 165, 489 |
| AcyI | GRCGYC | 1 cut(s) | 714 |
| AfaI | GTAC | 2 cut(s) | 747, 1057 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 908, 1216, 1387 |
| AflIII | ACRYGT | 1 cut(s) | 764 |
| AgsI | TTSAA | 8 cut(s) | 842, 883, 1085, 1132, 1284, 1316, 1373, 1508 |
| AjnI | CCWGG | 3 cut(s) | 262, 421, 1416 |
| AleI | CACNNNNGTG | 1 cut(s) | 634 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 493, 525, 1412, 1444 |
| AluBI | AGCT | 8 cut(s) | 296, 347, 449, 930, 1355, 1376, 1409, 1532 |
| AluI | AGCT | 8 cut(s) | 296, 347, 449, 930, 1355, 1376, 1409, 1532 |
| Alw21I | GWGCWC | 3 cut(s) | 349, 631, 658 |
| Alw26I | GTCTC | 2 cut(s) | 179, 1325 |
| Alw44I | GTGCAC | 2 cut(s) | 627, 654 |
| AlwI | GGATC | 2 cut(s) | 810, 1597 |
| AoxI | GGCC | 3 cut(s) | 88, 638, 1434 |
| ApaLI | GTGCAC | 2 cut(s) | 627, 654 |
| ApeKI | GCWGC | 5 cut(s) | 361, 930, 1010, 1376, 1409 |
| ApoI | RAATTY | 2 cut(s) | 668, 877 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 493, 525 |
| AspS9I | GGNCC | 4 cut(s) | 30, 89, 290, 1435 |
| AsuHPI | GGTGA | 2 cut(s) | 209, 1498 |
| AvaII | GGWCC | 2 cut(s) | 30, 290 |
| BaeGI | GKGCMC | 2 cut(s) | 631, 658 |
| BanII | GRGCYC | 1 cut(s) | 349 |
| Bbv12I | GWGCWC | 3 cut(s) | 349, 631, 658 |
| BbvI | GCAGC | 5 cut(s) | 348, 917, 997, 1363, 1396 |
| BccI | CCATC | 3 cut(s) | 1468, 1512, 1625 |
| BceAI | ACGGC | 1 cut(s) | 1449 |
| BciT130I | CCWGG | 3 cut(s) | 264, 423, 1418 |
| BciVI | GTATCC | 1 cut(s) | 988 |
| BcoDI | GTCTC | 2 cut(s) | 179, 1325 |
| BfaI | CTAG | 4 cut(s) | 219, 683, 1121, 1496 |
| BfuAI | ACCTGC | 1 cut(s) | 68 |
| BfuI | GTATCC | 1 cut(s) | 988 |
| BisI | GCNGC | 7 cut(s) | 362, 687, 728, 931, 1011, 1377, 1410 |
| BlsI | GCNGC | 7 cut(s) | 363, 688, 729, 932, 1012, 1378, 1411 |
| BmcAI | AGTACT | 1 cut(s) | 1057 |
| Bme1390I | CCNGG | 3 cut(s) | 264, 423, 1418 |
| Bme18I | GGWCC | 2 cut(s) | 30, 290 |
| BmgT120I | GGNCC | 4 cut(s) | 30, 89, 290, 1435 |
| BmiI | GGNNCC | 2 cut(s) | 291, 1110 |
| BmrFI | CCNGG | 3 cut(s) | 264, 423, 1418 |
| BmsI | GCATC | 5 cut(s) | 127, 1057, 1512, 1565, 1641 |
| Bpu10I | CCTNAGC | 1 cut(s) | 903 |
| BpuEI | CTTGAG | 2 cut(s) | 1109, 1545 |
| BsaAI | YACGTR | 1 cut(s) | 767 |
| BsaHI | GRCGYC | 1 cut(s) | 714 |
| BsaI | GGTCTC | 1 cut(s) | 1325 |
| BsaJI | CCNNGG | 3 cut(s) | 26, 641, 1005 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 154, 184, 389, 419, 1218, 1248 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 908, 1216, 1387 |
| Bse1I | ACTGG | 2 cut(s) | 632, 1063 |
| Bse3DI | GCAATG | 2 cut(s) | 760, 1476 |
| BseBI | CCWGG | 3 cut(s) | 264, 423, 1418 |
| BseDI | CCNNGG | 3 cut(s) | 26, 641, 1005 |
| BseGI | GGATG | 4 cut(s) | 142, 748, 991, 1527 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 908, 1216, 1387 |
| BseMI | GCAATG | 2 cut(s) | 760, 1476 |
| BseMII | CTCAG | 1 cut(s) | 1013 |
| BseNI | ACTGG | 2 cut(s) | 632, 1063 |
| BseRI | GAGGAG | 4 cut(s) | 347, 752, 1118, 1360 |
| BseSI | GKGCMC | 2 cut(s) | 631, 658 |
| BseXI | GCAGC | 5 cut(s) | 348, 917, 997, 1363, 1396 |
| BseYI | CCCAGC | 1 cut(s) | 1612 |
| Bsh1236I | CGCG | 1 cut(s) | 1212 |
| BshFI | GGCC | 3 cut(s) | 90, 640, 1436 |
| BsiHKAI | GWGCWC | 3 cut(s) | 349, 631, 658 |
| BslFI | GGGAC | 4 cut(s) | 303, 495, 790, 925 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 908, 1216, 1387 |
| BsmAI | GTCTC | 2 cut(s) | 179, 1325 |
| BsmFI | GGGAC | 4 cut(s) | 303, 495, 790, 925 |
| BsnI | GGCC | 3 cut(s) | 90, 640, 1436 |
| Bso31I | GGTCTC | 1 cut(s) | 1325 |
| Bsp1286I | GDGCHC | 3 cut(s) | 349, 631, 658 |
| Bsp1407I | TGTACA | 1 cut(s) | 745 |
| Bsp143I | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| BspACI | CCGC | 5 cut(s) | 33, 686, 727, 1210, 1335 |
| BspANI | GGCC | 3 cut(s) | 90, 640, 1436 |
| BspCNI | CTCAG | 1 cut(s) | 1012 |
| BspFNI | CGCG | 1 cut(s) | 1212 |
| BspHI | TCATGA | 1 cut(s) | 151 |
| BspLI | GGNNCC | 2 cut(s) | 291, 1110 |
| BspMI | ACCTGC | 1 cut(s) | 68 |
| BspPI | GGATC | 2 cut(s) | 810, 1597 |
| BspTNI | GGTCTC | 1 cut(s) | 1325 |
| BsrDI | GCAATG | 2 cut(s) | 760, 1476 |
| BsrGI | TGTACA | 1 cut(s) | 745 |
| BsrI | ACTGG | 2 cut(s) | 632, 1063 |
| BssECI | CCNNGG | 3 cut(s) | 26, 641, 1005 |
| BssMI | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| BssNI | GRCGYC | 1 cut(s) | 714 |
| BssT1I | CCWWGG | 3 cut(s) | 26, 641, 1005 |
| Bst2UI | CCWGG | 3 cut(s) | 264, 423, 1418 |
| Bst4CI | ACNGT | 3 cut(s) | 190, 276, 371 |
| Bst6I | CTCTTC | 2 cut(s) | 184, 984 |
| BstACI | GRCGYC | 1 cut(s) | 714 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 361 |
| BstAUI | TGTACA | 1 cut(s) | 745 |
| BstBAI | YACGTR | 1 cut(s) | 767 |
| BstC8I | GCNNGC | 4 cut(s) | 44, 447, 1034, 1241 |
| BstDEI | CTNAG | 2 cut(s) | 903, 999 |
| BstEII | GGTNACC | 1 cut(s) | 897 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 906 |
| BstF5I | GGATG | 4 cut(s) | 142, 748, 991, 1527 |
| BstFNI | CGCG | 1 cut(s) | 1212 |
| BstKTI | GATC | 4 cut(s) | 818, 856, 958, 1605 |
| BstMAI | GTCTC | 2 cut(s) | 179, 1325 |
| BstMBI | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 361, 1304, 1475 |
| BstNI | CCWGG | 3 cut(s) | 264, 423, 1418 |
| BstNSI | RCATGY | 2 cut(s) | 25, 359 |
| BstPI | GGTNACC | 1 cut(s) | 897 |
| BstSCI | CCNGG | 3 cut(s) | 262, 421, 1416 |
| BstSLI | GKGCMC | 2 cut(s) | 631, 658 |
| BstUI | CGCG | 1 cut(s) | 1212 |
| BstV1I | GCAGC | 5 cut(s) | 348, 917, 997, 1363, 1396 |
| BstX2I | RGATCY | 1 cut(s) | 815 |
| BstYI | RGATCY | 1 cut(s) | 815 |
| BsuI | GTATCC | 1 cut(s) | 988 |
| BsuRI | GGCC | 3 cut(s) | 90, 640, 1436 |
| BtsCI | GGATG | 4 cut(s) | 142, 748, 991, 1527 |
| BtsIMutI | CAGTG | 3 cut(s) | 272, 639, 1620 |
| BveI | ACCTGC | 1 cut(s) | 68 |
| Cac8I | GCNNGC | 4 cut(s) | 44, 447, 1034, 1241 |
| CciI | TCATGA | 1 cut(s) | 151 |
| Cfr13I | GGNCC | 4 cut(s) | 30, 89, 290, 1435 |
| CseI | GACGC | 1 cut(s) | 222 |
| CsiI | ACCWGGT | 1 cut(s) | 421 |
| Csp6I | GTAC | 2 cut(s) | 746, 1056 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1272, 1307 |
| CviAII | CATG | 6 cut(s) | 22, 152, 166, 356, 759, 1327 |
| CviQI | GTAC | 2 cut(s) | 746, 1056 |
| DdeI | CTNAG | 2 cut(s) | 903, 999 |
| DpnI | GATC | 4 cut(s) | 817, 855, 957, 1604 |
| DpnII | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| Eam1104I | CTCTTC | 2 cut(s) | 184, 984 |
| EarI | CTCTTC | 2 cut(s) | 184, 984 |
| Ecl136II | GAGCTC | 1 cut(s) | 347 |
| Eco130I | CCWWGG | 3 cut(s) | 26, 641, 1005 |
| Eco24I | GRGCYC | 1 cut(s) | 349 |
| Eco31I | GGTCTC | 1 cut(s) | 1325 |
| Eco32I | GATATC | 1 cut(s) | 1174 |
| Eco47I | GGWCC | 2 cut(s) | 30, 290 |
| Eco53kI | GAGCTC | 1 cut(s) | 347 |
| Eco57I | CTGAAG | 2 cut(s) | 165, 489 |
| Eco91I | GGTNACC | 1 cut(s) | 897 |
| EcoICRI | GAGCTC | 1 cut(s) | 347 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 906 |
| EcoO65I | GGTNACC | 1 cut(s) | 897 |
| EcoRII | CCWGG | 3 cut(s) | 262, 421, 1416 |
| EcoRV | GATATC | 1 cut(s) | 1174 |
| EcoT14I | CCWWGG | 3 cut(s) | 26, 641, 1005 |
| EcoT22I | ATGCAT | 4 cut(s) | 416, 760, 838, 1050 |
| EcoT38I | GRGCYC | 1 cut(s) | 349 |
| ErhI | CCWWGG | 3 cut(s) | 26, 641, 1005 |
| FaeI | CATG | 6 cut(s) | 25, 155, 169, 359, 762, 1330 |
| FaqI | GGGAC | 4 cut(s) | 303, 495, 790, 925 |
| FatI | CATG | 6 cut(s) | 21, 151, 165, 355, 758, 1326 |
| FauNDI | CATATG | 2 cut(s) | 832, 1255 |
| FblI | GTMKAC | 1 cut(s) | 1594 |
| Fnu4HI | GCNGC | 7 cut(s) | 362, 687, 728, 931, 1011, 1377, 1410 |
| FokI | GGATG | 4 cut(s) | 149, 755, 998, 1534 |
| FriOI | GRGCYC | 1 cut(s) | 349 |
| Fsp4HI | GCNGC | 7 cut(s) | 362, 687, 728, 931, 1011, 1377, 1410 |
| FspBI | CTAG | 4 cut(s) | 219, 683, 1121, 1496 |
| GluI | GCNGC | 7 cut(s) | 362, 687, 728, 931, 1011, 1377, 1410 |
| GsaI | CCCAGC | 1 cut(s) | 1616 |
| HaeIII | GGCC | 3 cut(s) | 90, 640, 1436 |
| HgaI | GACGC | 1 cut(s) | 222 |
| Hin1I | GRCGYC | 1 cut(s) | 714 |
| Hin1II | CATG | 6 cut(s) | 25, 155, 169, 359, 762, 1330 |
| HincII | GTYRAC | 2 cut(s) | 324, 1137 |
| HindII | GTYRAC | 2 cut(s) | 324, 1137 |
| HindIII | AAGCTT | 1 cut(s) | 447 |
| HinfI | GANTC | 1 cut(s) | 206 |
| HpaI | GTTAAC | 1 cut(s) | 324 |
| HphI | GGTGA | 2 cut(s) | 209, 1498 |
| Hpy166II | GTNNAC | 9 cut(s) | 19, 308, 324, 589, 629, 656, 1137, 1431, 1595 |
| Hpy188I | TCNGA | 2 cut(s) | 184, 1002 |
| Hpy188III | TCNNGA | 4 cut(s) | 152, 210, 374, 1316 |
| Hpy8I | GTNNAC | 9 cut(s) | 19, 308, 324, 589, 629, 656, 1137, 1431, 1595 |
| HpyAV | CCTTC | 4 cut(s) | 1144, 1396, 1477, 1483 |
| HpyCH4III | ACNGT | 3 cut(s) | 190, 276, 371 |
| HpyCH4IV | ACGT | 2 cut(s) | 714, 766 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 361, 1304, 1475 |
| HpyF3I | CTNAG | 2 cut(s) | 903, 999 |
| HpySE526I | ACGT | 2 cut(s) | 714, 766 |
| Hsp92I | GRCGYC | 1 cut(s) | 714 |
| Hsp92II | CATG | 6 cut(s) | 25, 155, 169, 359, 762, 1330 |
| KspAI | GTTAAC | 1 cut(s) | 324 |
| Kzo9I | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| LmnI | GCTCC | 2 cut(s) | 1226, 1444 |
| Lsp1109I | GCAGC | 5 cut(s) | 348, 917, 997, 1363, 1396 |
| LweI | GCATC | 5 cut(s) | 127, 1057, 1512, 1565, 1641 |
| MabI | ACCWGGT | 1 cut(s) | 421 |
| MaeI | CTAG | 4 cut(s) | 219, 683, 1121, 1496 |
| MaeII | ACGT | 2 cut(s) | 714, 766 |
| MaeIII | GTNAC | 3 cut(s) | 280, 897, 1205 |
| MalI | GATC | 4 cut(s) | 817, 855, 957, 1604 |
| MboI | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| MboII | GAAGA | 6 cut(s) | 122, 171, 482, 1001, 1178, 1181 |
| MfeI | CAATTG | 1 cut(s) | 780 |
| MflI | RGATCY | 1 cut(s) | 815 |
| MhlI | GDGCHC | 3 cut(s) | 349, 631, 658 |
| MluCI | AATT | 8 cut(s) | 47, 378, 668, 780, 877, 1311, 1368, 1395 |
| MmeI | TCCRAC | 1 cut(s) | 172 |
| Mph1103I | ATGCAT | 4 cut(s) | 416, 760, 838, 1050 |
| MseI | TTAA | 5 cut(s) | 323, 366, 576, 609, 1452 |
| MslI | CAYNNNNRTG | 4 cut(s) | 354, 634, 753, 984 |
| MspR9I | CCNGG | 3 cut(s) | 264, 423, 1418 |
| MunI | CAATTG | 1 cut(s) | 780 |
| MvaI | CCWGG | 3 cut(s) | 264, 423, 1418 |
| MvnI | CGCG | 1 cut(s) | 1212 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 361, 1304, 1475 |
| NdeI | CATATG | 2 cut(s) | 832, 1255 |
| NdeII | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| NlaIII | CATG | 6 cut(s) | 25, 155, 169, 359, 762, 1330 |
| NlaIV | GGNNCC | 2 cut(s) | 291, 1110 |
| NsiI | ATGCAT | 4 cut(s) | 416, 760, 838, 1050 |
| NspI | RCATGY | 2 cut(s) | 25, 359 |
| OliI | CACNNNNGTG | 1 cut(s) | 634 |
| PagI | TCATGA | 1 cut(s) | 151 |
| PfeI | GAWTC | 1 cut(s) | 206 |
| PkrI | GCNGC | 7 cut(s) | 363, 688, 729, 932, 1012, 1378, 1411 |
| Ppu21I | YACGTR | 1 cut(s) | 767 |
| Psp124BI | GAGCTC | 1 cut(s) | 349 |
| Psp6I | CCWGG | 3 cut(s) | 262, 421, 1416 |
| PspEI | GGTNACC | 1 cut(s) | 897 |
| PspFI | CCCAGC | 1 cut(s) | 1612 |
| PspGI | CCWGG | 3 cut(s) | 262, 421, 1416 |
| PspN4I | GGNNCC | 2 cut(s) | 291, 1110 |
| PspPI | GGNCC | 4 cut(s) | 30, 89, 290, 1435 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 386, 418 |
| PsuI | RGATCY | 1 cut(s) | 815 |
| RsaI | GTAC | 2 cut(s) | 747, 1057 |
| RsaNI | GTAC | 2 cut(s) | 746, 1056 |
| RseI | CAYNNNNRTG | 4 cut(s) | 354, 634, 753, 984 |
| SacI | GAGCTC | 1 cut(s) | 349 |
| SaqAI | TTAA | 5 cut(s) | 323, 366, 576, 609, 1452 |
| SatI | GCNGC | 7 cut(s) | 362, 687, 728, 931, 1011, 1377, 1410 |
| Sau3AI | GATC | 4 cut(s) | 815, 853, 955, 1602 |
| Sau96I | GGNCC | 4 cut(s) | 30, 89, 290, 1435 |
| ScaI | AGTACT | 1 cut(s) | 1057 |
| ScrFI | CCNGG | 3 cut(s) | 264, 423, 1418 |
| SduI | GDGCHC | 3 cut(s) | 349, 631, 658 |
| SexAI | ACCWGGT | 1 cut(s) | 421 |
| SfaNI | GCATC | 5 cut(s) | 127, 1057, 1512, 1565, 1641 |
| SinI | GGWCC | 2 cut(s) | 30, 290 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 354, 634, 753, 984 |
| SmlI | CTYRAG | 2 cut(s) | 1088, 1560 |
| SmoI | CTYRAG | 2 cut(s) | 1088, 1560 |
| Sse9I | AATT | 8 cut(s) | 47, 378, 668, 780, 877, 1311, 1368, 1395 |
| SsiI | CCGC | 5 cut(s) | 33, 686, 727, 1210, 1335 |
| SspI | AATATT | 1 cut(s) | 1128 |
| SspMI | CTAG | 4 cut(s) | 219, 683, 1121, 1496 |
| SstI | GAGCTC | 1 cut(s) | 349 |
| StyD4I | CCNGG | 3 cut(s) | 262, 421, 1416 |
| StyI | CCWWGG | 3 cut(s) | 26, 641, 1005 |
| TaaI | ACNGT | 3 cut(s) | 190, 276, 371 |
| TaiI | ACGT | 2 cut(s) | 717, 769 |
| TasI | AATT | 8 cut(s) | 47, 378, 668, 780, 877, 1311, 1368, 1395 |
| TatI | WGTACW | 2 cut(s) | 745, 1055 |
| TauI | GCSGC | 2 cut(s) | 689, 730 |
| TfiI | GAWTC | 1 cut(s) | 206 |
| Tru1I | TTAA | 5 cut(s) | 323, 366, 576, 609, 1452 |
| Tru9I | TTAA | 5 cut(s) | 323, 366, 576, 609, 1452 |
| TscAI | CASTG | 3 cut(s) | 279, 639, 1627 |
| TseI | GCWGC | 5 cut(s) | 361, 930, 1010, 1376, 1409 |
| TspDTI | ATGAA | 7 cut(s) | 78, 140, 510, 661, 1002, 1179, 1250 |
| TspGWI | ACGGA | 2 cut(s) | 162, 606 |
| TspRI | CASTG | 3 cut(s) | 279, 639, 1627 |
| VneI | GTGCAC | 2 cut(s) | 627, 654 |
| VpaK11BI | GGWCC | 2 cut(s) | 30, 290 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 906 |
| XapI | RAATTY | 2 cut(s) | 668, 877 |
| XceI | RCATGY | 2 cut(s) | 25, 359 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 639 |
| XmiI | GTMKAC | 1 cut(s) | 1594 |
| XspI | CTAG | 4 cut(s) | 219, 683, 1121, 1496 |
| ZraI | GACGTC | 1 cut(s) | 715 |
| ZrmI | AGTACT | 1 cut(s) | 1057 |
| Zsp2I | ATGCAT | 4 cut(s) | 416, 760, 838, 1050 |