Transposase family tnp2
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 100 - 213 | 1e-15 | Plant transposase (Ptta/En/Spm family) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 632 |
| AciI | CCGC | 4 cut(s) | 206, 247, 334, 632 |
| AclI | AACGTT | 1 cut(s) | 829 |
| AcoI | YGGCCR | 1 cut(s) | 97 |
| AcuI | CTGAAG | 1 cut(s) | 543 |
| AfaI | GTAC | 4 cut(s) | 150, 352, 639, 659 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 277, 790 |
| AflIII | ACRYGT | 1 cut(s) | 287 |
| AgeI | ACCGGT | 1 cut(s) | 151 |
| AgsI | TTSAA | 2 cut(s) | 439, 809 |
| AjnI | CCWGG | 1 cut(s) | 214 |
| AluBI | AGCT | 3 cut(s) | 779, 815, 875 |
| AluI | AGCT | 3 cut(s) | 779, 815, 875 |
| Alw21I | GWGCWC | 1 cut(s) | 178 |
| Alw26I | GTCTC | 3 cut(s) | 162, 290, 728 |
| Alw44I | GTGCAC | 1 cut(s) | 174 |
| AoxI | GGCC | 1 cut(s) | 97 |
| ApaLI | GTGCAC | 1 cut(s) | 174 |
| ApeKI | GCWGC | 3 cut(s) | 331, 485, 779 |
| AsiGI | ACCGGT | 1 cut(s) | 151 |
| BaeGI | GKGCMC | 1 cut(s) | 178 |
| BbsI | GAAGAC | 1 cut(s) | 579 |
| Bbv12I | GWGCWC | 1 cut(s) | 178 |
| BbvI | GCAGC | 3 cut(s) | 343, 472, 766 |
| BccI | CCATC | 2 cut(s) | 55, 279 |
| BceAI | ACGGC | 1 cut(s) | 84 |
| BciT130I | CCWGG | 1 cut(s) | 216 |
| BciVI | GTATCC | 1 cut(s) | 234 |
| BcoDI | GTCTC | 3 cut(s) | 162, 290, 728 |
| BfaI | CTAG | 1 cut(s) | 599 |
| BfuI | GTATCC | 1 cut(s) | 234 |
| BisI | GCNGC | 5 cut(s) | 207, 248, 332, 486, 780 |
| BlsI | GCNGC | 5 cut(s) | 208, 249, 333, 487, 781 |
| Bme1390I | CCNGG | 1 cut(s) | 216 |
| BmrFI | CCNGG | 1 cut(s) | 216 |
| BmsI | GCATC | 5 cut(s) | 28, 42, 352, 472, 497 |
| BpiI | GAAGAC | 1 cut(s) | 579 |
| Bsa29I | ATCGAT | 2 cut(s) | 50, 325 |
| BsaI | GGTCTC | 1 cut(s) | 290 |
| BsaJI | CCNNGG | 3 cut(s) | 161, 214, 300 |
| BsaWI | WCCGGW | 1 cut(s) | 151 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 138, 168, 621, 651, 782, 812 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 277, 790 |
| Bse118I | RCCGGY | 1 cut(s) | 151 |
| Bse1I | ACTGG | 1 cut(s) | 25 |
| Bse3DI | GCAATG | 1 cut(s) | 708 |
| BseBI | CCWGG | 1 cut(s) | 216 |
| BseCI | ATCGAT | 2 cut(s) | 50, 325 |
| BseDI | CCNNGG | 3 cut(s) | 161, 214, 300 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 277, 790 |
| BseMI | GCAATG | 1 cut(s) | 708 |
| BseMII | CTCAG | 2 cut(s) | 699, 807 |
| BseNI | ACTGG | 1 cut(s) | 25 |
| BseRI | GAGGAG | 3 cut(s) | 542, 763, 863 |
| BseSI | GKGCMC | 1 cut(s) | 178 |
| BseXI | GCAGC | 3 cut(s) | 343, 472, 766 |
| Bsh1285I | CGRYCG | 1 cut(s) | 329 |
| BshFI | GGCC | 1 cut(s) | 99 |
| BshTI | ACCGGT | 1 cut(s) | 151 |
| BshVI | ATCGAT | 2 cut(s) | 50, 325 |
| BsiEI | CGRYCG | 1 cut(s) | 329 |
| BsiHKAI | GWGCWC | 1 cut(s) | 178 |
| BsiSI | CCGG | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 277, 790 |
| BsmAI | GTCTC | 3 cut(s) | 162, 290, 728 |
| BsmI | GAATGC | 1 cut(s) | 892 |
| BsnI | GGCC | 1 cut(s) | 99 |
| Bso31I | GGTCTC | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 178 |
| Bsp143I | GATC | 1 cut(s) | 326 |
| BspACI | CCGC | 4 cut(s) | 206, 247, 334, 632 |
| BspANI | GGCC | 1 cut(s) | 99 |
| BspCNI | CTCAG | 2 cut(s) | 698, 808 |
| BspDI | ATCGAT | 2 cut(s) | 50, 325 |
| BspTNI | GGTCTC | 1 cut(s) | 290 |
| BsrBI | CCGCTC | 1 cut(s) | 632 |
| BsrDI | GCAATG | 1 cut(s) | 708 |
| BsrFI | RCCGGY | 1 cut(s) | 151 |
| BsrI | ACTGG | 1 cut(s) | 25 |
| BssAI | RCCGGY | 1 cut(s) | 151 |
| BssECI | CCNNGG | 3 cut(s) | 161, 214, 300 |
| BssMI | GATC | 1 cut(s) | 326 |
| BssT1I | CCWWGG | 2 cut(s) | 161, 300 |
| Bst2UI | CCWGG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 5 cut(s) | 180, 350, 376, 452, 642 |
| Bst6I | CTCTTC | 2 cut(s) | 519, 876 |
| BstDEI | CTNAG | 2 cut(s) | 685, 816 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstKTI | GATC | 1 cut(s) | 329 |
| BstMAI | GTCTC | 3 cut(s) | 162, 290, 728 |
| BstMBI | GATC | 1 cut(s) | 326 |
| BstMCI | CGRYCG | 1 cut(s) | 329 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 340, 604, 707 |
| BstNI | CCWGG | 1 cut(s) | 216 |
| BstNSI | RCATGY | 1 cut(s) | 291 |
| BstSCI | CCNGG | 1 cut(s) | 214 |
| BstSLI | GKGCMC | 1 cut(s) | 178 |
| BstV1I | GCAGC | 3 cut(s) | 343, 472, 766 |
| BstV2I | GAAGAC | 1 cut(s) | 579 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 95, 844 |
| Bsu15I | ATCGAT | 2 cut(s) | 50, 325 |
| BsuI | GTATCC | 1 cut(s) | 234 |
| BsuRI | GGCC | 1 cut(s) | 99 |
| BsuTUI | ATCGAT | 2 cut(s) | 50, 325 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| BtsI | GCAGTG | 1 cut(s) | 507 |
| BtsIMutI | CAGTG | 1 cut(s) | 507 |
| Cfr10I | RCCGGY | 1 cut(s) | 151 |
| ClaI | ATCGAT | 2 cut(s) | 50, 325 |
| Csp6I | GTAC | 4 cut(s) | 149, 351, 638, 658 |
| CspAI | ACCGGT | 1 cut(s) | 151 |
| CviAII | CATG | 3 cut(s) | 16, 56, 288 |
| CviQI | GTAC | 4 cut(s) | 149, 351, 638, 658 |
| DdeI | CTNAG | 2 cut(s) | 685, 816 |
| DpnI | GATC | 1 cut(s) | 328 |
| DpnII | GATC | 1 cut(s) | 326 |
| EaeI | YGGCCR | 1 cut(s) | 97 |
| Eam1104I | CTCTTC | 2 cut(s) | 519, 876 |
| EarI | CTCTTC | 2 cut(s) | 519, 876 |
| Eco130I | CCWWGG | 2 cut(s) | 161, 300 |
| Eco31I | GGTCTC | 1 cut(s) | 290 |
| Eco57I | CTGAAG | 1 cut(s) | 543 |
| EcoRII | CCWGG | 1 cut(s) | 214 |
| EcoT14I | CCWWGG | 2 cut(s) | 161, 300 |
| EcoT22I | ATGCAT | 2 cut(s) | 57, 345 |
| ErhI | CCWWGG | 2 cut(s) | 161, 300 |
| FaeI | CATG | 3 cut(s) | 19, 59, 291 |
| FaiI | YATR | 9 cut(s) | 17, 57, 289, 311, 317, 477, 582, 695, 878 |
| FatI | CATG | 3 cut(s) | 15, 55, 287 |
| FauI | CCCGC | 2 cut(s) | 327, 625 |
| Fnu4HI | GCNGC | 5 cut(s) | 207, 248, 332, 486, 780 |
| FokI | GGATG | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 5 cut(s) | 207, 248, 332, 486, 780 |
| FspBI | CTAG | 1 cut(s) | 599 |
| GluI | GCNGC | 5 cut(s) | 207, 248, 332, 486, 780 |
| HaeIII | GGCC | 1 cut(s) | 99 |
| HapII | CCGG | 1 cut(s) | 152 |
| Hin1II | CATG | 3 cut(s) | 19, 59, 291 |
| HincII | GTYRAC | 1 cut(s) | 444 |
| HindII | GTYRAC | 1 cut(s) | 444 |
| HinfI | GANTC | 1 cut(s) | 809 |
| HpaII | CCGG | 1 cut(s) | 152 |
| Hpy166II | GTNNAC | 3 cut(s) | 176, 382, 444 |
| Hpy8I | GTNNAC | 3 cut(s) | 176, 382, 444 |
| HpyAV | CCTTC | 2 cut(s) | 511, 889 |
| HpyCH4III | ACNGT | 5 cut(s) | 180, 350, 376, 452, 642 |
| HpyCH4IV | ACGT | 1 cut(s) | 829 |
| HpyCH4V | TGCA | 8 cut(s) | 55, 176, 343, 488, 505, 584, 740, 890 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 340, 604, 707 |
| HpyF3I | CTNAG | 2 cut(s) | 685, 816 |
| HpySE526I | ACGT | 1 cut(s) | 829 |
| Hsp92II | CATG | 3 cut(s) | 19, 59, 291 |
| Kzo9I | GATC | 1 cut(s) | 326 |
| LmnI | GCTCC | 1 cut(s) | 629 |
| LpnPI | CCDG | 6 cut(s) | 38, 165, 201, 228, 339, 432 |
| Lsp1109I | GCAGC | 3 cut(s) | 343, 472, 766 |
| LweI | GCATC | 5 cut(s) | 28, 42, 352, 472, 497 |
| MaeI | CTAG | 1 cut(s) | 599 |
| MaeII | ACGT | 1 cut(s) | 829 |
| MaeIII | GTNAC | 1 cut(s) | 608 |
| MalI | GATC | 1 cut(s) | 328 |
| MbiI | CCGCTC | 1 cut(s) | 632 |
| MboI | GATC | 1 cut(s) | 326 |
| MboII | GAAGA | 4 cut(s) | 425, 536, 584, 893 |
| MfeI | CAATTG | 1 cut(s) | 714 |
| MhlI | GDGCHC | 1 cut(s) | 178 |
| MluCI | AATT | 3 cut(s) | 7, 68, 714 |
| MmeI | TCCRAC | 3 cut(s) | 9, 395, 408 |
| MnlI | CCTC | 9 cut(s) | 403, 520, 614, 712, 741, 748, 784, 841, 862 |
| Mph1103I | ATGCAT | 2 cut(s) | 57, 345 |
| MseI | TTAA | 5 cut(s) | 129, 542, 855, 900, 919 |
| MslI | CAYNNNNRTG | 2 cut(s) | 60, 842 |
| MspA1I | CMGCKG | 2 cut(s) | 334, 815 |
| MspI | CCGG | 1 cut(s) | 152 |
| MspR9I | CCNGG | 1 cut(s) | 216 |
| MunI | CAATTG | 1 cut(s) | 714 |
| Mva1269I | GAATGC | 1 cut(s) | 892 |
| MvaI | CCWGG | 1 cut(s) | 216 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 340, 604, 707 |
| NdeII | GATC | 1 cut(s) | 326 |
| NlaIII | CATG | 3 cut(s) | 19, 59, 291 |
| NsiI | ATGCAT | 2 cut(s) | 57, 345 |
| NspI | RCATGY | 1 cut(s) | 291 |
| PciI | ACATGT | 1 cut(s) | 287 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 115 |
| PctI | GAATGC | 1 cut(s) | 892 |
| PfeI | GAWTC | 1 cut(s) | 809 |
| PinAI | ACCGGT | 1 cut(s) | 151 |
| PkrI | GCNGC | 5 cut(s) | 208, 249, 333, 487, 781 |
| Ple19I | CGATCG | 1 cut(s) | 329 |
| PscI | ACATGT | 1 cut(s) | 287 |
| Psp1406I | AACGTT | 1 cut(s) | 829 |
| Psp6I | CCWGG | 1 cut(s) | 214 |
| PspGI | CCWGG | 1 cut(s) | 214 |
| PvuI | CGATCG | 1 cut(s) | 329 |
| PvuII | CAGCTG | 1 cut(s) | 815 |
| RsaI | GTAC | 4 cut(s) | 150, 352, 639, 659 |
| RsaNI | GTAC | 4 cut(s) | 149, 351, 638, 658 |
| RseI | CAYNNNNRTG | 2 cut(s) | 60, 842 |
| SaqAI | TTAA | 5 cut(s) | 129, 542, 855, 900, 919 |
| SatI | GCNGC | 5 cut(s) | 207, 248, 332, 486, 780 |
| Sau3AI | GATC | 1 cut(s) | 326 |
| ScrFI | CCNGG | 1 cut(s) | 216 |
| SduI | GDGCHC | 1 cut(s) | 178 |
| SetI | ASST | 9 cut(s) | 421, 428, 781, 800, 817, 832, 873, 877, 900 |
| SfaNI | GCATC | 5 cut(s) | 28, 42, 352, 472, 497 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 60, 842 |
| Sse9I | AATT | 3 cut(s) | 7, 68, 714 |
| SsiI | CCGC | 4 cut(s) | 206, 247, 334, 632 |
| SspI | AATATT | 1 cut(s) | 435 |
| SspMI | CTAG | 1 cut(s) | 599 |
| StyD4I | CCNGG | 1 cut(s) | 214 |
| StyI | CCWWGG | 2 cut(s) | 161, 300 |
| TaaI | ACNGT | 5 cut(s) | 180, 350, 376, 452, 642 |
| TaiI | ACGT | 1 cut(s) | 832 |
| TaqI | TCGA | 2 cut(s) | 50, 325 |
| TasI | AATT | 3 cut(s) | 7, 68, 714 |
| TatI | WGTACW | 1 cut(s) | 350 |
| TauI | GCSGC | 2 cut(s) | 209, 250 |
| TfiI | GAWTC | 1 cut(s) | 809 |
| Tru1I | TTAA | 5 cut(s) | 129, 542, 855, 900, 919 |
| Tru9I | TTAA | 5 cut(s) | 129, 542, 855, 900, 919 |
| TscAI | CASTG | 1 cut(s) | 507 |
| TseI | GCWGC | 3 cut(s) | 331, 485, 779 |
| TspDTI | ATGAA | 5 cut(s) | 72, 181, 719, 836, 918 |
| TspGWI | ACGGA | 1 cut(s) | 645 |
| TspRI | CASTG | 1 cut(s) | 507 |
| VneI | GTGCAC | 1 cut(s) | 174 |
| XceI | RCATGY | 1 cut(s) | 291 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 13 |
| XspI | CTAG | 1 cut(s) | 599 |
| Zsp2I | ATGCAT | 2 cut(s) | 57, 345 |