bromo domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 2 - 120 | 1.5e-12 | Plant transposase (Ptta/En/Spm family) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 688 |
| AccII | CGCG | 1 cut(s) | 198 |
| AciI | CCGC | 1 cut(s) | 688 |
| AclI | AACGTT | 1 cut(s) | 10 |
| AcsI | RAATTY | 2 cut(s) | 187, 530 |
| AcvI | CACGTG | 1 cut(s) | 326 |
| AfaI | GTAC | 2 cut(s) | 381, 414 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 475 |
| AflIII | ACRYGT | 1 cut(s) | 323 |
| AgsI | TTSAA | 4 cut(s) | 206, 284, 449, 653 |
| AjnI | CCWGG | 1 cut(s) | 373 |
| AluBI | AGCT | 3 cut(s) | 148, 487, 626 |
| AluI | AGCT | 3 cut(s) | 148, 487, 626 |
| Alw21I | GWGCWC | 1 cut(s) | 150 |
| Alw26I | GTCTC | 1 cut(s) | 314 |
| ApeKI | GCWGC | 2 cut(s) | 623, 742 |
| ApoI | RAATTY | 2 cut(s) | 187, 530 |
| AseI | ATTAAT | 1 cut(s) | 209 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 453 |
| AspLEI | GCGC | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 1 cut(s) | 142 |
| AxyI | CCTNAGG | 1 cut(s) | 177 |
| BanII | GRGCYC | 1 cut(s) | 150 |
| BbrPI | CACGTG | 1 cut(s) | 326 |
| Bbv12I | GWGCWC | 1 cut(s) | 150 |
| BbvI | GCAGC | 2 cut(s) | 635, 754 |
| BccI | CCATC | 1 cut(s) | 664 |
| BciT130I | CCWGG | 1 cut(s) | 375 |
| BclI | TGATCA | 1 cut(s) | 598 |
| BcoDI | GTCTC | 1 cut(s) | 314 |
| BisI | GCNGC | 2 cut(s) | 624, 743 |
| BlsI | GCNGC | 2 cut(s) | 625, 744 |
| Bme1390I | CCNGG | 1 cut(s) | 375 |
| BmiI | GGNNCC | 1 cut(s) | 183 |
| BmrFI | CCNGG | 1 cut(s) | 375 |
| BmsI | GCATC | 4 cut(s) | 260, 311, 610, 754 |
| Bsa29I | ATCGAT | 1 cut(s) | 659 |
| BsaAI | YACGTR | 1 cut(s) | 326 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 475 |
| Bse21I | CCTNAGG | 1 cut(s) | 177 |
| Bse3DI | GCAATG | 2 cut(s) | 130, 558 |
| BseBI | CCWGG | 1 cut(s) | 375 |
| BseCI | ATCGAT | 1 cut(s) | 659 |
| BseGI | GGATG | 2 cut(s) | 54, 251 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BseMI | GCAATG | 2 cut(s) | 130, 558 |
| BseMII | CTCAG | 2 cut(s) | 95, 168 |
| BseXI | GCAGC | 2 cut(s) | 635, 754 |
| Bsh1236I | CGCG | 1 cut(s) | 198 |
| BshVI | ATCGAT | 1 cut(s) | 659 |
| BsiHKAI | GWGCWC | 1 cut(s) | 150 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BsmAI | GTCTC | 1 cut(s) | 314 |
| Bsp1286I | GDGCHC | 1 cut(s) | 150 |
| Bsp1407I | TGTACA | 1 cut(s) | 379 |
| Bsp143I | GATC | 3 cut(s) | 84, 231, 598 |
| BspACI | CCGC | 1 cut(s) | 688 |
| BspCNI | CTCAG | 2 cut(s) | 94, 169 |
| BspDI | ATCGAT | 1 cut(s) | 659 |
| BspFNI | CGCG | 1 cut(s) | 198 |
| BspLI | GGNNCC | 1 cut(s) | 183 |
| BsrBI | CCGCTC | 1 cut(s) | 688 |
| BsrDI | GCAATG | 2 cut(s) | 130, 558 |
| BsrGI | TGTACA | 1 cut(s) | 379 |
| BssMI | GATC | 3 cut(s) | 84, 231, 598 |
| Bst2UI | CCWGG | 1 cut(s) | 375 |
| Bst4CI | ACNGT | 2 cut(s) | 19, 726 |
| Bst6I | CTCTTC | 1 cut(s) | 654 |
| BstAUI | TGTACA | 1 cut(s) | 379 |
| BstBAI | YACGTR | 1 cut(s) | 326 |
| BstDEI | CTNAG | 2 cut(s) | 81, 177 |
| BstF5I | GGATG | 2 cut(s) | 54, 251 |
| BstFNI | CGCG | 1 cut(s) | 198 |
| BstHHI | GCGC | 1 cut(s) | 200 |
| BstKTI | GATC | 3 cut(s) | 87, 234, 601 |
| BstMAI | GTCTC | 1 cut(s) | 314 |
| BstMBI | GATC | 3 cut(s) | 84, 231, 598 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 575, 694 |
| BstNI | CCWGG | 1 cut(s) | 375 |
| BstNSI | RCATGY | 1 cut(s) | 697 |
| BstSCI | CCNGG | 1 cut(s) | 373 |
| BstUI | CGCG | 1 cut(s) | 198 |
| BstV1I | GCAGC | 2 cut(s) | 635, 754 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 374 |
| Bsu15I | ATCGAT | 1 cut(s) | 659 |
| Bsu36I | CCTNAGG | 1 cut(s) | 177 |
| BsuTUI | ATCGAT | 1 cut(s) | 659 |
| BtsCI | GGATG | 2 cut(s) | 54, 251 |
| BtsIMutI | CAGTG | 1 cut(s) | 731 |
| CfoI | GCGC | 1 cut(s) | 200 |
| ClaI | ATCGAT | 1 cut(s) | 659 |
| Csp6I | GTAC | 2 cut(s) | 380, 413 |
| CviAII | CATG | 5 cut(s) | 434, 613, 681, 694, 698 |
| CviJI | RGCY | 8 cut(s) | 148, 239, 440, 468, 487, 578, 626, 666 |
| CviKI_1 | RGCY | 8 cut(s) | 148, 239, 440, 468, 487, 578, 626, 666 |
| CviQI | GTAC | 2 cut(s) | 380, 413 |
| DdeI | CTNAG | 2 cut(s) | 81, 177 |
| DpnI | GATC | 3 cut(s) | 86, 233, 600 |
| DpnII | GATC | 3 cut(s) | 84, 231, 598 |
| DraI | TTTAAA | 1 cut(s) | 535 |
| Eam1104I | CTCTTC | 1 cut(s) | 654 |
| EarI | CTCTTC | 1 cut(s) | 654 |
| Ecl136II | GAGCTC | 1 cut(s) | 148 |
| Eco24I | GRGCYC | 1 cut(s) | 150 |
| Eco53kI | GAGCTC | 1 cut(s) | 148 |
| Eco72I | CACGTG | 1 cut(s) | 326 |
| Eco81I | CCTNAGG | 1 cut(s) | 177 |
| EcoICRI | GAGCTC | 1 cut(s) | 148 |
| EcoRII | CCWGG | 1 cut(s) | 373 |
| EcoT22I | ATGCAT | 2 cut(s) | 304, 699 |
| EcoT38I | GRGCYC | 1 cut(s) | 150 |
| FaeI | CATG | 5 cut(s) | 437, 616, 684, 697, 701 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 471, 503 |
| FatI | CATG | 5 cut(s) | 433, 612, 680, 693, 697 |
| FauNDI | CATATG | 1 cut(s) | 595 |
| FbaI | TGATCA | 1 cut(s) | 598 |
| Fnu4HI | GCNGC | 2 cut(s) | 624, 743 |
| FokI | GGATG | 2 cut(s) | 61, 238 |
| FriOI | GRGCYC | 1 cut(s) | 150 |
| Fsp4HI | GCNGC | 2 cut(s) | 624, 743 |
| GlaI | GCGC | 1 cut(s) | 199 |
| GluI | GCNGC | 2 cut(s) | 624, 743 |
| HhaI | GCGC | 1 cut(s) | 200 |
| Hin1II | CATG | 5 cut(s) | 437, 616, 684, 697, 701 |
| Hin6I | GCGC | 1 cut(s) | 198 |
| HinP1I | GCGC | 1 cut(s) | 198 |
| HindIII | AAGCTT | 1 cut(s) | 485 |
| HinfI | GANTC | 2 cut(s) | 164, 354 |
| HphI | GGTGA | 1 cut(s) | 142 |
| Hpy166II | GTNNAC | 4 cut(s) | 22, 121, 380, 715 |
| Hpy188I | TCNGA | 4 cut(s) | 84, 169, 359, 459 |
| Hpy188III | TCNNGA | 2 cut(s) | 88, 263 |
| Hpy8I | GTNNAC | 4 cut(s) | 22, 121, 380, 715 |
| HpyAV | CCTTC | 3 cut(s) | 323, 631, 687 |
| HpyCH4III | ACNGT | 2 cut(s) | 19, 726 |
| HpyCH4IV | ACGT | 2 cut(s) | 10, 325 |
| HpyCH4V | TGCA | 9 cut(s) | 135, 302, 337, 388, 551, 593, 623, 697, 742 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 575, 694 |
| HpyF3I | CTNAG | 2 cut(s) | 81, 177 |
| HpySE526I | ACGT | 2 cut(s) | 10, 325 |
| Hsp92II | CATG | 5 cut(s) | 437, 616, 684, 697, 701 |
| HspAI | GCGC | 1 cut(s) | 198 |
| Ksp22I | TGATCA | 1 cut(s) | 598 |
| Kzo9I | GATC | 3 cut(s) | 84, 231, 598 |
| LpnPI | CCDG | 9 cut(s) | 48, 73, 138, 189, 276, 360, 375, 387, 548 |
| Lsp1109I | GCAGC | 2 cut(s) | 635, 754 |
| LweI | GCATC | 4 cut(s) | 260, 311, 610, 754 |
| MaeII | ACGT | 2 cut(s) | 10, 325 |
| MaeIII | GTNAC | 1 cut(s) | 608 |
| MalI | GATC | 3 cut(s) | 86, 233, 600 |
| MbiI | CCGCTC | 1 cut(s) | 688 |
| MboI | GATC | 3 cut(s) | 84, 231, 598 |
| MboII | GAAGA | 3 cut(s) | 491, 641, 746 |
| MhlI | GDGCHC | 1 cut(s) | 150 |
| MluCI | AATT | 7 cut(s) | 187, 206, 342, 453, 530, 737, 760 |
| MlyI | GAGTC | 2 cut(s) | 158, 363 |
| MnlI | CCTC | 8 cut(s) | 107, 172, 240, 259, 389, 403, 430, 487 |
| Mph1103I | ATGCAT | 2 cut(s) | 304, 699 |
| MroXI | GAANNNNTTC | 1 cut(s) | 453 |
| MseI | TTAA | 3 cut(s) | 209, 273, 534 |
| MspR9I | CCNGG | 1 cut(s) | 375 |
| MvaI | CCWGG | 1 cut(s) | 375 |
| MvnI | CGCG | 1 cut(s) | 198 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 575, 694 |
| NdeI | CATATG | 1 cut(s) | 595 |
| NdeII | GATC | 3 cut(s) | 84, 231, 598 |
| NlaIII | CATG | 5 cut(s) | 437, 616, 684, 697, 701 |
| NlaIV | GGNNCC | 1 cut(s) | 183 |
| NmuCI | GTSAC | 1 cut(s) | 608 |
| NsiI | ATGCAT | 2 cut(s) | 304, 699 |
| NspI | RCATGY | 1 cut(s) | 697 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 40 |
| PdmI | GAANNNNTTC | 1 cut(s) | 453 |
| PkrI | GCNGC | 2 cut(s) | 625, 744 |
| PleI | GAGTC | 2 cut(s) | 158, 362 |
| PmaCI | CACGTG | 1 cut(s) | 326 |
| PmlI | CACGTG | 1 cut(s) | 326 |
| PpsI | GAGTC | 2 cut(s) | 158, 362 |
| Ppu21I | YACGTR | 1 cut(s) | 326 |
| PshBI | ATTAAT | 1 cut(s) | 209 |
| Psp124BI | GAGCTC | 1 cut(s) | 150 |
| Psp1406I | AACGTT | 1 cut(s) | 10 |
| Psp6I | CCWGG | 1 cut(s) | 373 |
| PspCI | CACGTG | 1 cut(s) | 326 |
| PspGI | CCWGG | 1 cut(s) | 373 |
| PspN4I | GGNNCC | 1 cut(s) | 183 |
| RsaI | GTAC | 2 cut(s) | 381, 414 |
| RsaNI | GTAC | 2 cut(s) | 380, 413 |
| SacI | GAGCTC | 1 cut(s) | 150 |
| SaqAI | TTAA | 3 cut(s) | 209, 273, 534 |
| SatI | GCNGC | 2 cut(s) | 624, 743 |
| Sau3AI | GATC | 3 cut(s) | 84, 231, 598 |
| SchI | GAGTC | 2 cut(s) | 158, 363 |
| ScrFI | CCNGG | 1 cut(s) | 375 |
| SduI | GDGCHC | 1 cut(s) | 150 |
| SfaNI | GCATC | 4 cut(s) | 260, 311, 610, 754 |
| Sse9I | AATT | 7 cut(s) | 187, 206, 342, 453, 530, 737, 760 |
| SsiI | CCGC | 1 cut(s) | 688 |
| SstI | GAGCTC | 1 cut(s) | 150 |
| StyD4I | CCNGG | 1 cut(s) | 373 |
| TaaI | ACNGT | 2 cut(s) | 19, 726 |
| TaiI | ACGT | 2 cut(s) | 13, 328 |
| TaqI | TCGA | 2 cut(s) | 659, 705 |
| TasI | AATT | 7 cut(s) | 187, 206, 342, 453, 530, 737, 760 |
| TatI | WGTACW | 1 cut(s) | 379 |
| Tru1I | TTAA | 3 cut(s) | 209, 273, 534 |
| Tru9I | TTAA | 3 cut(s) | 209, 273, 534 |
| TscAI | CASTG | 1 cut(s) | 731 |
| TseFI | GTSAC | 1 cut(s) | 608 |
| TseI | GCWGC | 2 cut(s) | 623, 742 |
| Tsp45I | GTSAC | 1 cut(s) | 608 |
| TspDTI | ATGAA | 8 cut(s) | 17, 120, 227, 306, 515, 569, 650, 669 |
| TspRI | CASTG | 1 cut(s) | 731 |
| VspI | ATTAAT | 1 cut(s) | 209 |
| XapI | RAATTY | 2 cut(s) | 187, 530 |
| XceI | RCATGY | 1 cut(s) | 697 |
| XmnI | GAANNNNTTC | 1 cut(s) | 453 |
| Zsp2I | ATGCAT | 2 cut(s) | 304, 699 |