Rorug01G0309300

ATP-dependent microtubule motor activity, plus-end-directed

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
42572524 .. 42576312
3789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0309300.1

Sequence Viewer

Length: 1746 bp
ATGAAAGCCAAGCTCATAGTGGAGGTGACATCAAGTGCTTCCCCATCTACAATTGCCTTAGCAGCTGCTGCAAAACACACCGGAGGCAAATTGGTTTGCATCCTTCCGGAGCCAGATCTAGCTGAATCAAAGAAAGTGATCAAAGACTCCGGCCTAAAAGACTTGGTAGAATTCAAGACCGGTGACCCTTTTGAGCTATTGACGAATTACGAGAACATTGATTTCTCTCTGGTTGATTGCAAGAATGATGAGTACGCAGGGTTGATGAAGTTGCTGGATGTTAATCCGAGAAAATCAGTGGTTGTGGCTACTAACTTGGTTGGTGAAAGAAAAGGATTCGAAGGACATGTGAAGGGAGTGAAGGAGGAGAGGGTTGTCGTGAGGTCGATGAAGCATCCCATTGGAAAAGGTATGCAGGTCACCATGATCGGAAAGGAAGATTGGGGTGGTGGAAGAGTTTCGAATGAAGCAGAAAAAAGGGGTGGTTTCAAGAAGAGGAATGGTAATAAGAGCAAATGGCTTGTCAAGGTTTTTGAAATGGCGAATTCGGGGACTTGGCTCTTGGTTTTGAGGTTATGTGCTCTTCTCCTTTTCTTGGAGGCCAAGGTTTTTGTTTTGGGTGGTGATGATAGTAATGTCCAGGGTGGTAATACTATAGATGGGTCTGGTGGAGTATCAGAGATTTGTGTTAATAATGATCTGGCTAGTTTCATGCCACCACCATATGGTAATTCATCTGATATAGTCTGCAGGCCTATTTGGAACACTTTTGTTTTGAGGTACACCCAAACTGAAGATCATGTAATGAACATTATATTATCTGCTGTGTACACCACTGGGTGGGTAGGAATGGGATTTTCCAGAGATGGATTGATGGTTGGTTCAAGTGCCATAGTGGGATGGGTTAATAGAAAAGGCCATGCAAGAATTAAGCAATACTATTTGCAAGGTTCAAAGTCTTCGCAAGTTATACCAGACAAAGGTGAATTGCCACTTACTGGTATTCCTGCTACTGTTGTGCTTCATGGCCCTAGGATTTACTTGGCATTCCAGTTGAAATTCCAAGCTCATCTTTCTCGGCAACCTCTTATCTTGGCCGTTGGAAGCGGTTACCCCAAGCACAACAACCACTTAACAAAACACACCGATAAAACCACCATCAAGTTCGACTTCTCTGCAGGTTCTGCATCTGAGGCACCTAGTGATTTTGGCCAGATGAAGAAGAACCATGGAATATTGGCCATATTTGGATGGGGTATAATCATTCCTTTGGGGGCAATTGTCCCAAGATACTTCAAGCACAAGGACCCCTTGTGGTACTATCTCCATTCAATTATTCAATTTGTGGGATTTGTCATTGGCCTTGCAGCAGTGGTACTTGGACAAAAACTCTATAATAAAATAGACGCCAATTTCCAAACACATAGAGCAATTGGAATCTTTGTTCTTGTGCTTATTATCCTTCAGATATTGGCATTCTTTCTAAGACCAGGCAAGGATGCCAAGATTAGAAAGTACTGGAATTGGTACCACCACTGGTTTGGAAGGTTTGCAATCTTCTTTGCAGCTGTGAACATAGTTCTGGGGATCAACATTGGAGCTGCAGGCATTGAATGGAAGATTAGTTATGGATTTTTTCTCAGCGGAATTCTTATCGCAGTCATTGTTTTAGAAGTTTTGGCAAGGATGAGGAGGACAGAAAATAAGAATATGCCTCCAAACTTCCAAATGAATCCGGTTCCATAG

Protein Analysis

581

Amino Acids

64.26

Weight (kDa)

9.59

Isoelectric Point (pI)

26.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1442 PF07279 3 - 156 3.7e-14 Protein of unknown function (DUF1442)
DOMON PF03351 260 - 326 6.1e-09 DOMON domain
Cytochrom_B561 PF03188 410 - 530 6e-08 Eukaryotic cytochrome b561
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000040)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g00150 FvH4_2g13531 FvH4_2g21543 FvH4_3g32800 FvH4_3g32802 FvH4_4g00091 FvH4_4g00092 FvH4_5g22070 FvH4_5g31391 FvH4_6g11351 FvH4_6g23430 FvH4_6g23672 FvH4_6g52753
malus_domestica MD03G1101500.v1.1 MD08G1234800.v1.1
pyrus_communis pycom07g24860 pycom09g07860 pycom10g09330 pycom10g15360 pycom11g01600 pycom11g13460 pycom13g15580
rosa_chinensis RchiOBHm_Chr1g0332021 RchiOBHm_Chr2g0095801 RchiOBHm_Chr2g0111771 RchiOBHm_Chr2g0127541 RchiOBHm_Chr2g0136581 RchiOBHm_Chr2g0136591 RchiOBHm_Chr2g0143311 RchiOBHm_Chr2g0145131 RchiOBHm_Chr2g0151391 RchiOBHm_Chr3g0468771 RchiOBHm_Chr3g0473281 RchiOBHm_Chr3g0481961 RchiOBHm_Chr4g0393741 RchiOBHm_Chr4g0397391 RchiOBHm_Chr4g0435991 RchiOBHm_Chr5g0015951 RchiOBHm_Chr5g0016651 RchiOBHm_Chr5g0039191 RchiOBHm_Chr5g0039211 RchiOBHm_Chr6g0254441 RchiOBHm_Chr6g0260911 RchiOBHm_Chr6g0274501 RchiOBHm_Chr6g0274511 RchiOBHm_Chr7g0184951 RchiOBHm_Chr7g0201701 RchiOBHm_Chr7g0201721 RchiOBHm_Chr7g0201731 RchiOBHm_Chr7g0234921 RchiOBHm_Chr7g0237841
rosa_laevigata RLG00000001204 RLG00000001230 RLG00000001341 RLG00000001513 RLG00000001971 RLG00000002177 RLG00000002360 RLG00000003112 RLG00000003130 RLG00000003854 RLG00000008209 RLG00000008322 RLG00000008412 RLG00000008524 RLG00000009491 RLG00000009908 RLG00000011823 RLG00000013252 RLG00000013782 RLG00000013944 RLG00000014480 RLG00000019084 RLG00000019544 RLG00000019751 RLG00000020093 RLG00000020094 RLG00000020551 RLG00000020838 RLG00000020982 RLG00000021059 RLG00000022067 RLG00000022604 RLG00000022632 RLG00000022849 RLG00000023962 RLG00000025767 RLG00000026838 RLG00000027291 RLG00000028131 RLG00000028210 RLG00000028834 RLG00000030169 RLG00000031271 RLG00000032327 RLG00000033996 RLG00000034546 RLG00000034654 RLG00000034810 RLG00000035087 RLG00000036782
rosa_multiflora Rmu_co8330487.1_g000001 Rmu_co8359977.1_g000001 Rmu_co8445341.1_g000001 Rmu_sc0000141.1_g000003 Rmu_sc0000353.1_g000018 Rmu_sc0000740.1_g000017 Rmu_sc0000744.1_g000138 Rmu_sc0000813.1_g000014 Rmu_sc0000908.1_g000003 Rmu_sc0000999.1_g000014 Rmu_sc0001103.1_g000001 Rmu_sc0001248.1_g000013 Rmu_sc0001282.1_g000021 Rmu_sc0001293.1_g000018 Rmu_sc0001608.1_g000015 Rmu_sc0001616.1_g000060 Rmu_sc0001851.1_g000013 Rmu_sc0001990.1_g000003 Rmu_sc0002138.1_g000002 Rmu_sc0002200.1_g000021 Rmu_sc0002230.1_g000029 Rmu_sc0002230.1_g000030 Rmu_sc0002702.1_g000017 Rmu_sc0002806.1_g000010 Rmu_sc0002809.1_g000023 Rmu_sc0002869.1_g000005 Rmu_sc0003156.1_g000027 Rmu_sc0003368.1_g000018 Rmu_sc0003642.1_g000007 Rmu_sc0003653.1_g000004 Rmu_sc0003791.1_g000008 Rmu_sc0003804.1_g000013 Rmu_sc0004015.1_g000022 Rmu_sc0004230.1_g000017 Rmu_sc0004368.1_g000011 Rmu_sc0004529.1_g000011 Rmu_sc0004540.1_g000011 Rmu_sc0005008.1_g000014 Rmu_sc0005171.1_g000001 Rmu_sc0005212.1_g000013 Rmu_sc0005947.1_g000003 Rmu_sc0006317.1_g000026 Rmu_sc0006578.1_g000005 Rmu_sc0006993.1_g000001 Rmu_sc0007442.1_g000002 Rmu_sc0007442.1_g000004 Rmu_sc0007876.1_g000004 Rmu_sc0007876.1_g000005 Rmu_sc0009624.1_g000004 Rmu_sc0009742.1_g000005 Rmu_sc0010306.1_g000007 Rmu_sc0011745.1_g000008 Rmu_sc0011800.1_g000003 Rmu_sc0012369.1_g000003 Rmu_sc0012787.1_g000003 Rmu_sc0012989.1_g000001 Rmu_sc0013416.1_g000003 Rmu_sc0021155.1_g000001 Rmu_sc0022372.1_g000001 Rmu_sc0023106.1_g000001 Rmu_sc0023684.1_g000003 Rmu_sc0023684.1_g000004 Rmu_sc0026897.1_g000001 Rmu_sc0027278.1_g000001 Rmu_sc0028533.1_g000001 Rmu_sc0028533.1_g000003 Rmu_sc0038440.1_g000001
rosa_roxburghii Rroxscaffold_1G00031730 Rroxscaffold_1G00033690 Rroxscaffold_1G00073100 Rroxscaffold_2G00079640 Rroxscaffold_2G00089760 Rroxscaffold_2G00091520 Rroxscaffold_2G00112420 Rroxscaffold_2G00115720 Rroxscaffold_2G00116170 Rroxscaffold_2G00116180 Rroxscaffold_2G00152590 Rroxscaffold_2G00155940 Rroxscaffold_3G00220010 Rroxscaffold_3G00234940 Rroxscaffold_3G00235250 Rroxscaffold_3G00237510 Rroxscaffold_3G00250950 Rroxscaffold_3G00250960 Rroxscaffold_3G00262030 Rroxscaffold_4G00299560 Rroxscaffold_4G00306000 Rroxscaffold_4G00311350 Rroxscaffold_4G00318530 Rroxscaffold_4G00329140 Rroxscaffold_5G00342020 Rroxscaffold_5G00350770 Rroxscaffold_5G00354620 Rroxscaffold_5G00354630 Rroxscaffold_5G00361180 Rroxscaffold_5G00377270 Rroxscaffold_6G00397870 Rroxscaffold_6G00397960 Rroxscaffold_6G00407290 Rroxscaffold_6G00408690 Rroxscaffold_6G00421900 Rroxscaffold_6G00421910 Rroxscaffold_7G00181630 Rroxscaffold_7G00182330 Rroxscaffold_7G00182340 Rroxscaffold_7G00212590 Rroxscaffold_7G00214060 Rroxscaffold_7G00214070 Rroxscaffold_7G00215940
rosa_rugosa Rorug01G0052800 Rorug01G0052800 Rorug01G0075200 Rorug01G0090500 Rorug01G0091500 Rorug01G0106000 Rorug01G0309300 Rorug01G0309400.1 Rorug02G0092000 Rorug02G0128200 Rorug02G0152800 Rorug02G0366100 Rorug02G0401500 Rorug02G0465600 Rorug02G0474400 Rorug03G0322500 Rorug04G0044000 Rorug04G0044100 Rorug04G0064800.1 Rorug04G0077400 Rorug04G0094800 Rorug04G0094800 Rorug04G0111400 Rorug04G0137800 Rorug04G0137900 Rorug04G0138000 Rorug04G0138000 Rorug04G0446200 Rorug05G0090600 Rorug05G0239900 Rorug05G0284400 Rorug05G0534400 Rorug05G0561600 Rorug06G0098100 Rorug06G0098100 Rorug06G0134500 Rorug06G0238500 Rorug06G0238600 Rorug07G0228900 Rorug07G0229000 Rorug07G0291600 Rorug07G0291700
rosa_samantha Rh1AG082200 Rh1AG129200 Rh1AG131500 Rh1AG159900 Rh1AG330800 Rh1AG408400 Rh1BG089600 Rh1CG086000 Rh1CG149200 Rh1CG405600 Rh1DG008200 Rh1DG015800 Rh1DG068000 Rh1DG118400 Rh1DG122500 Rh1DG202400 Rh1DG202500 Rh1DG266300 Rh1DG266400 Rh1DG287400 Rh1DG314700 Rh1DG314800 Rh2AG128400 Rh2AG128500 Rh2AG291000 Rh2AG347900 Rh2AG350700 Rh2AG415100 Rh2AG417200 Rh2AG497700 Rh2AG505000 Rh2AG507600 Rh2BG131300 Rh2BG233900 Rh2BG291700 Rh2BG291800 Rh2BG302700 Rh2BG302800 Rh2BG334700 Rh2BG334900 Rh2BG347000 Rh2BG347800 Rh2BG357100 Rh2BG528200 Rh2BG528300 Rh2BG603700 Rh2CG032300 Rh2CG034300 Rh2CG232600 Rh2CG483700 Rh2DG077400 Rh2DG103100 Rh2DG103200 Rh2DG287000 Rh2DG287200 Rh2DG375000 Rh2DG382700 Rh2DG537400 Rh2DG602900 Rh2DG603000 Rh3AG080800 Rh3AG217300 Rh3AG321800 Rh3BG082700 Rh3BG082800 Rh3BG168600 Rh3BG185900 Rh3BG224400 Rh3BG250500 Rh3BG260700 Rh3BG351300 Rh3BG353600 Rh3BG353700 Rh3CG082900 Rh3CG083000 Rh3CG176200 Rh3CG176300 Rh3CG219400 Rh3CG219500 Rh3CG254600 Rh3CG254700 Rh3CG256000 Rh3CG256100 Rh3CG257400 Rh3CG356200 Rh3CG356300 Rh3DG084300 Rh4AG030500 Rh4BG132300 Rh4BG139800 Rh4BG140000 Rh4CG027200 Rh4CG033100 Rh4CG033200 Rh4CG069600 Rh4CG103300 Rh4CG322600 Rh4DG028500 Rh4DG081000 Rh4DG190200 Rh4DG193500 Rh4DG212900 Rh4DG303900 Rh4DG342900 Rh5AG131000 Rh5AG166800 Rh5AG167000 Rh5AG201600 Rh5AG372200 Rh5AG372300 Rh5AG417900 Rh5BG082500 Rh5BG171200 Rh5BG171300 Rh5BG180300 Rh5BG194400 Rh5BG302800 Rh5BG343300 Rh5BG402700 Rh5BG428500 Rh5CG190700 Rh5CG190800 Rh5CG219100 Rh5CG451900 Rh5DG175200 Rh5DG175400 Rh5DG177000 Rh5DG177100 Rh5DG356000 Rh5DG356100 Rh5DG493500 Rh6AG006700 Rh6AG051700 Rh6AG064100 Rh6AG064200 Rh6AG064500 Rh6AG092800 Rh6AG152000 Rh6AG152100 Rh6AG291900 Rh6AG419000 Rh6AG465900 Rh6AG466000 Rh6BG125000 Rh6BG160600 Rh6BG161800 Rh6BG359100 Rh6BG359200 Rh6CG071400 Rh6CG071500 Rh6CG103500 Rh6CG103600 Rh6CG117200 Rh6CG123700 Rh6CG123800 Rh6CG156600 Rh6CG192500 Rh6CG208600 Rh6CG208700 Rh6CG365200 Rh6DG146200 Rh6DG146800 Rh6DG193200 Rh6DG193300 Rh6DG193400 Rh6DG349200 Rh7AG251100 Rh7AG259300 Rh7AG425100 Rh7BG262700 Rh7BG262900 Rh7BG369500 Rh7CG107400 Rh7CG107500 Rh7CG257400 Rh7CG267300 Rh7DG070500 Rh7DG105000 Rh7DG198500 Rh7DG291300 Rh7DG480600
rosa_wichuraiana Rw2G027920 Rw3G014750 Rw3G021490 Rw4G001910 Rw6G013120 Rw6G020040 Rw6G022930 Rw6G041900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 406, 1169
Acc65I GGTACC 1 cut(s) 1527
AccB1I GGYRCC 2 cut(s) 1195, 1527
AccB7I CCANNNNNTGG 3 cut(s) 725, 840, 998
AccIII TCCGGA 1 cut(s) 106
AciI CCGC 2 cut(s) 1107, 1644
AclWI GGATC 1 cut(s) 1595
AcoI YGGCCR 3 cut(s) 1095, 1210, 1239
AcsI RAATTY 4 cut(s) 170, 544, 1058, 1647
AcuI CTGAAG 2 cut(s) 813, 1448
AcyI GRCGYC 1 cut(s) 1407
AdeI CACNNNGTG 2 cut(s) 840, 1202
AfaI GTAC 7 cut(s) 254, 782, 830, 1319, 1377, 1517, 1529
AfiI CCNNNNNNNGG 5 cut(s) 595, 725, 840, 980, 998
AflIII ACRYGT 1 cut(s) 346
AgeI ACCGGT 1 cut(s) 179
AjnI CCWGG 2 cut(s) 639, 1489
AjuI GAANNNNNNNTTGG 2 cut(s) 424, 456
AloI GAACNNNNNNTCC 2 cut(s) 1428, 1460
AluBI AGCT 7 cut(s) 13, 65, 122, 196, 1067, 1568, 1601
AluI AGCT 7 cut(s) 13, 65, 122, 196, 1067, 1568, 1601
Alw21I GWGCWC 1 cut(s) 583
AlwI GGATC 1 cut(s) 1595
AlwNI CAGNNNCTG 2 cut(s) 68, 1184
Aor13HI TCCGGA 1 cut(s) 106
AoxI GGCC 9 cut(s) 151, 600, 752, 916, 1027, 1095, 1210, 1239, 1360
ApeKI GCWGC 6 cut(s) 62, 65, 68, 1367, 1565, 1601
ApoI RAATTY 4 cut(s) 170, 544, 1058, 1647
ArsI GACNNNNNNTTYG 2 cut(s) 507, 539
AsiGI ACCGGT 1 cut(s) 179
Asp700I GAANNNNTTC 1 cut(s) 457
Asp718I GGTACC 1 cut(s) 1527
AspA2I CCTAGG 1 cut(s) 1031
AspS9I GGNCC 2 cut(s) 1028, 1306
AsuHPI GGTGA 6 cut(s) 37, 194, 335, 412, 635, 995
AsuII TTCGAA 2 cut(s) 339, 461
AvaII GGWCC 1 cut(s) 1306
AvrII CCTAGG 1 cut(s) 1031
BalI TGGCCA 2 cut(s) 1212, 1241
BanI GGYRCC 2 cut(s) 1195, 1527
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 1 cut(s) 583
BbvI GCAGC 6 cut(s) 52, 55, 74, 1379, 1577, 1588
BccI CCATC 7 cut(s) 52, 653, 860, 868, 894, 1166, 1245
BceAI ACGGC 1 cut(s) 1082
BcgI CGANNNNNNTGC 2 cut(s) 1157, 1191
BciT130I CCWGG 2 cut(s) 641, 1491
BclI TGATCA 1 cut(s) 138
BfaI CTAG 4 cut(s) 119, 705, 1032, 1200
BfmI CTRYAG 4 cut(s) 654, 748, 1176, 1602
BfuAI ACCTGC 2 cut(s) 406, 1169
BglII AGATCT 1 cut(s) 115
BisI GCNGC 6 cut(s) 63, 66, 69, 1368, 1566, 1602
BlnI CCTAGG 1 cut(s) 1031
BlsI GCNGC 6 cut(s) 64, 67, 70, 1369, 1567, 1603
BmcAI AGTACT 1 cut(s) 1517
Bme1390I CCNGG 2 cut(s) 641, 1491
Bme18I GGWCC 1 cut(s) 1306
BmgT120I GGNCC 2 cut(s) 1028, 1306
BmiI GGNNCC 5 cut(s) 111, 1197, 1308, 1529, 1740
BmrFI CCNGG 2 cut(s) 641, 1491
BmrI ACTGGG 1 cut(s) 846
BmsI GCATC 4 cut(s) 108, 403, 1196, 1489
BmuI ACTGGG 1 cut(s) 846
BpiI GAAGAC 1 cut(s) 951
Bpu10I CCTNAGC 1 cut(s) 58
Bpu14I TTCGAA 2 cut(s) 339, 461
BsaBI GATNNNNATC 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 1407
BsaJI CCNNGG 4 cut(s) 603, 640, 1031, 1228
BsaWI WCCGGW 4 cut(s) 80, 106, 179, 1735
Bsc4I CCNNNNNNNGG 5 cut(s) 595, 725, 840, 980, 998
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 5 cut(s) 841, 1003, 1051, 1523, 1541
Bse8I GATNNNNATC 1 cut(s) 282
BseAI TCCGGA 1 cut(s) 106
BseBI CCWGG 2 cut(s) 641, 1491
BseDI CCNNGG 4 cut(s) 603, 640, 1031, 1228
BseGI GGATG 7 cut(s) 99, 283, 394, 905, 1256, 1504, 1692
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 5 cut(s) 595, 725, 840, 980, 998
BseMII CTCAG 2 cut(s) 1182, 1654
BseNI ACTGG 5 cut(s) 841, 1003, 1051, 1523, 1541
BseRI GAGGAG 2 cut(s) 380, 1705
BseXI GCAGC 6 cut(s) 52, 55, 74, 1379, 1577, 1588
BshFI GGCC 9 cut(s) 153, 602, 754, 918, 1029, 1097, 1212, 1241, 1362
BshNI GGYRCC 2 cut(s) 1195, 1527
BshTI ACCGGT 1 cut(s) 179
BsiHKAI GWGCWC 1 cut(s) 583
BsiSI CCGG 5 cut(s) 81, 107, 150, 180, 1736
BslFI GGGAC 2 cut(s) 565, 1268
BslI CCNNNNNNNGG 5 cut(s) 595, 725, 840, 980, 998
BsmFI GGGAC 2 cut(s) 565, 1268
BsmI GAATGC 2 cut(s) 1046, 1475
BsnI GGCC 9 cut(s) 153, 602, 754, 918, 1029, 1097, 1212, 1241, 1362
Bsp119I TTCGAA 2 cut(s) 339, 461
Bsp1286I GDGCHC 1 cut(s) 583
Bsp13I TCCGGA 1 cut(s) 106
Bsp1407I TGTACA 1 cut(s) 828
Bsp143I GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
Bsp19I CCATGG 1 cut(s) 1228
BspACI CCGC 2 cut(s) 1107, 1644
BspANI GGCC 9 cut(s) 153, 602, 754, 918, 1029, 1097, 1212, 1241, 1362
BspCNI CTCAG 2 cut(s) 1183, 1653
BspEI TCCGGA 1 cut(s) 106
BspLI GGNNCC 5 cut(s) 111, 1197, 1308, 1529, 1740
BspMAI CTGCAG 3 cut(s) 752, 1180, 1606
BspMI ACCTGC 2 cut(s) 406, 1169
BspPI GGATC 1 cut(s) 1595
BspQI GCTCTTC 1 cut(s) 588
BspT104I TTCGAA 2 cut(s) 339, 461
BspT107I GGYRCC 2 cut(s) 1195, 1527
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 1 cut(s) 828
BsrI ACTGG 5 cut(s) 841, 1003, 1051, 1523, 1541
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 4 cut(s) 603, 640, 1031, 1228
BssMI GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
BssNI GRCGYC 1 cut(s) 1407
BssT1I CCWWGG 3 cut(s) 603, 1031, 1228
Bst2UI CCWGG 2 cut(s) 641, 1491
Bst4CI ACNGT 1 cut(s) 1015
Bst6I CTCTTC 3 cut(s) 448, 488, 588
BstACI GRCGYC 1 cut(s) 1407
BstAPI GCANNNNNTGC 2 cut(s) 68, 1184
BstAUI TGTACA 1 cut(s) 828
BstBI TTCGAA 2 cut(s) 339, 461
BstC8I GCNNGC 2 cut(s) 752, 1606
BstDEI CTNAG 4 cut(s) 58, 1191, 1484, 1640
BstDSI CCRYGG 1 cut(s) 1228
BstEII GGTNACC 3 cut(s) 182, 418, 1109
BstF5I GGATG 7 cut(s) 99, 283, 394, 905, 1256, 1504, 1692
BstKTI GATC 6 cut(s) 118, 141, 429, 700, 799, 1590
BstMBI GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
BstMWI GCNNNNNNNGC 4 cut(s) 62, 68, 1184, 1193
BstNI CCWGG 2 cut(s) 641, 1491
BstNSI RCATGY 1 cut(s) 350
BstPI GGTNACC 3 cut(s) 182, 418, 1109
BstSCI CCNGG 2 cut(s) 639, 1489
BstSFI CTRYAG 4 cut(s) 654, 748, 1176, 1602
BstV1I GCAGC 6 cut(s) 52, 55, 74, 1379, 1577, 1588
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 1 cut(s) 115
BstXI CCANNNNNNTGG 1 cut(s) 1541
BstYI RGATCY 1 cut(s) 115
BsuRI GGCC 9 cut(s) 153, 602, 754, 918, 1029, 1097, 1212, 1241, 1362
BtgI CCRYGG 1 cut(s) 1228
BtsCI GGATG 7 cut(s) 99, 283, 394, 905, 1256, 1504, 1692
BtsI GCAGTG 1 cut(s) 1377
BtsIMutI CAGTG 4 cut(s) 303, 834, 1377, 1534
BveI ACCTGC 2 cut(s) 406, 1169
Cac8I GCNNGC 2 cut(s) 752, 1606
CaiI CAGNNNCTG 2 cut(s) 68, 1184
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 2 cut(s) 1028, 1306
CseI GACGC 1 cut(s) 1415
Csp6I GTAC 7 cut(s) 253, 781, 829, 1318, 1376, 1516, 1528
CspAI ACCGGT 1 cut(s) 179
CviAII CATG 7 cut(s) 347, 424, 712, 800, 920, 1025, 1229
CviQI GTAC 7 cut(s) 253, 781, 829, 1318, 1376, 1516, 1528
DdeI CTNAG 4 cut(s) 58, 1191, 1484, 1640
DpnI GATC 6 cut(s) 117, 140, 428, 699, 798, 1589
DpnII GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
DraIII CACNNNGTG 2 cut(s) 840, 1202
EaeI YGGCCR 3 cut(s) 1095, 1210, 1239
Eam1104I CTCTTC 3 cut(s) 448, 488, 588
EarI CTCTTC 3 cut(s) 448, 488, 588
Eco130I CCWWGG 3 cut(s) 603, 1031, 1228
Eco147I AGGCCT 1 cut(s) 754
Eco47I GGWCC 1 cut(s) 1306
Eco57I CTGAAG 2 cut(s) 813, 1448
Eco91I GGTNACC 3 cut(s) 182, 418, 1109
EcoO109I RGGNCCY 1 cut(s) 1306
EcoO65I GGTNACC 3 cut(s) 182, 418, 1109
EcoRI GAATTC 3 cut(s) 170, 544, 1647
EcoRII CCWGG 2 cut(s) 639, 1489
EcoT14I CCWWGG 3 cut(s) 603, 1031, 1228
ErhI CCWWGG 3 cut(s) 603, 1031, 1228
FaeI CATG 7 cut(s) 350, 427, 715, 803, 923, 1028, 1232
FalI AAGNNNNNCTT 6 cut(s) 1056, 1088, 1154, 1186, 1295, 1327
FaqI GGGAC 2 cut(s) 565, 1268
FatI CATG 7 cut(s) 346, 423, 711, 799, 919, 1024, 1228
FauNDI CATATG 1 cut(s) 724
FbaI TGATCA 1 cut(s) 138
Fnu4HI GCNGC 6 cut(s) 63, 66, 69, 1368, 1566, 1602
FokI GGATG 7 cut(s) 86, 290, 381, 912, 1263, 1511, 1699
Fsp4HI GCNGC 6 cut(s) 63, 66, 69, 1368, 1566, 1602
FspBI CTAG 4 cut(s) 119, 705, 1032, 1200
GluI GCNGC 6 cut(s) 63, 66, 69, 1368, 1566, 1602
HaeIII GGCC 9 cut(s) 153, 602, 754, 918, 1029, 1097, 1212, 1241, 1362
HapII CCGG 5 cut(s) 81, 107, 150, 180, 1736
HgaI GACGC 1 cut(s) 1415
Hin1I GRCGYC 1 cut(s) 1407
Hin1II CATG 7 cut(s) 350, 427, 715, 803, 923, 1028, 1232
HinfI GANTC 5 cut(s) 125, 146, 336, 1437, 1732
HpaII CCGG 5 cut(s) 81, 107, 150, 180, 1736
HphI GGTGA 6 cut(s) 37, 194, 335, 412, 635, 995
Hpy166II GTNNAC 4 cut(s) 783, 829, 831, 1573
Hpy188I TCNGA 6 cut(s) 288, 431, 679, 739, 1192, 1467
Hpy188III TCNNGA 5 cut(s) 107, 175, 379, 490, 861
Hpy8I GTNNAC 4 cut(s) 783, 829, 831, 1573
HpyAV CCTTC 6 cut(s) 113, 335, 346, 355, 1472, 1539
HpyCH4III ACNGT 1 cut(s) 1015
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 68, 1184, 1193
HpyF3I CTNAG 4 cut(s) 58, 1191, 1484, 1640
Hsp92I GRCGYC 1 cut(s) 1407
Hsp92II CATG 7 cut(s) 350, 427, 715, 803, 923, 1028, 1232
Kpn2I TCCGGA 1 cut(s) 106
KpnI GGTACC 1 cut(s) 1531
Ksp22I TGATCA 1 cut(s) 138
Kzo9I GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
LguI GCTCTTC 1 cut(s) 588
LmnI GCTCC 2 cut(s) 109, 1598
Lsp1109I GCAGC 6 cut(s) 52, 55, 74, 1379, 1577, 1588
LweI GCATC 4 cut(s) 108, 403, 1196, 1489
MaeI CTAG 4 cut(s) 119, 705, 1032, 1200
MaeIII GTNAC 4 cut(s) 25, 182, 418, 1109
MalI GATC 6 cut(s) 117, 140, 428, 699, 798, 1589
MboI GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
MfeI CAATTG 3 cut(s) 51, 1278, 1431
MflI RGATCY 1 cut(s) 115
MhlI GDGCHC 1 cut(s) 583
MlsI TGGCCA 2 cut(s) 1212, 1241
MluNI TGGCCA 2 cut(s) 1212, 1241
MlyI GAGTC 1 cut(s) 140
MmeI TCCRAC 1 cut(s) 1081
Mox20I TGGCCA 2 cut(s) 1212, 1241
MroI TCCGGA 1 cut(s) 106
MroXI GAANNNNTTC 1 cut(s) 457
MscI TGGCCA 2 cut(s) 1212, 1241
MseI TTAA 5 cut(s) 282, 690, 906, 930, 1133
Msp20I TGGCCA 2 cut(s) 1212, 1241
MspA1I CMGCKG 3 cut(s) 65, 1568, 1644
MspI CCGG 5 cut(s) 81, 107, 150, 180, 1736
MspR9I CCNGG 2 cut(s) 641, 1491
MunI CAATTG 3 cut(s) 51, 1278, 1431
Mva1269I GAATGC 2 cut(s) 1046, 1475
MvaI CCWGG 2 cut(s) 641, 1491
MwoI GCNNNNNNNGC 4 cut(s) 62, 68, 1184, 1193
NcoI CCATGG 1 cut(s) 1228
NdeI CATATG 1 cut(s) 724
NdeII GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
NlaIII CATG 7 cut(s) 350, 427, 715, 803, 923, 1028, 1232
NlaIV GGNNCC 5 cut(s) 111, 1197, 1308, 1529, 1740
NmeAIII GCCGAG 1 cut(s) 1057
NmuCI GTSAC 3 cut(s) 25, 182, 418
NspI RCATGY 1 cut(s) 350
NspV TTCGAA 2 cut(s) 339, 461
PceI AGGCCT 1 cut(s) 754
PciI ACATGT 1 cut(s) 346
PciSI GCTCTTC 1 cut(s) 588
PctI GAATGC 2 cut(s) 1046, 1475
PdmI GAANNNNTTC 1 cut(s) 457
PfeI GAWTC 4 cut(s) 125, 336, 1437, 1732
PflMI CCANNNNNTGG 3 cut(s) 725, 840, 998
PinAI ACCGGT 1 cut(s) 179
PkrI GCNGC 6 cut(s) 64, 67, 70, 1369, 1567, 1603
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
PpuMI RGGWCCY 1 cut(s) 1306
PscI ACATGT 1 cut(s) 346
Psp5II RGGWCCY 1 cut(s) 1306
Psp6I CCWGG 2 cut(s) 639, 1489
PspEI GGTNACC 3 cut(s) 182, 418, 1109
PspGI CCWGG 2 cut(s) 639, 1489
PspN4I GGNNCC 5 cut(s) 111, 1197, 1308, 1529, 1740
PspPI GGNCC 2 cut(s) 1028, 1306
PspPPI RGGWCCY 1 cut(s) 1306
PstI CTGCAG 3 cut(s) 752, 1180, 1606
PstNI CAGNNNCTG 2 cut(s) 68, 1184
PsuI RGATCY 1 cut(s) 115
PvuII CAGCTG 2 cut(s) 65, 1568
RsaI GTAC 7 cut(s) 254, 782, 830, 1319, 1377, 1517, 1529
RsaNI GTAC 7 cut(s) 253, 781, 829, 1318, 1376, 1516, 1528
SapI GCTCTTC 1 cut(s) 588
SaqAI TTAA 5 cut(s) 282, 690, 906, 930, 1133
SatI GCNGC 6 cut(s) 63, 66, 69, 1368, 1566, 1602
Sau3AI GATC 6 cut(s) 115, 138, 426, 697, 796, 1587
Sau96I GGNCC 2 cut(s) 1028, 1306
ScaI AGTACT 1 cut(s) 1517
SchI GAGTC 1 cut(s) 140
ScrFI CCNGG 2 cut(s) 641, 1491
SduI GDGCHC 1 cut(s) 583
SfaNI GCATC 4 cut(s) 108, 403, 1196, 1489
SfcI CTRYAG 4 cut(s) 654, 748, 1176, 1602
SfuI TTCGAA 2 cut(s) 339, 461
SinI GGWCC 1 cut(s) 1306
SseBI AGGCCT 1 cut(s) 754
SsiI CCGC 2 cut(s) 1107, 1644
SspI AATATT 1 cut(s) 1236
SspMI CTAG 4 cut(s) 119, 705, 1032, 1200
StuI AGGCCT 1 cut(s) 754
StyD4I CCNGG 2 cut(s) 639, 1489
StyI CCWWGG 3 cut(s) 603, 1031, 1228
TaaI ACNGT 1 cut(s) 1015
TaqI TCGA 4 cut(s) 339, 386, 461, 1167
TatI WGTACW 2 cut(s) 828, 1515
TfiI GAWTC 4 cut(s) 125, 336, 1437, 1732
Tru1I TTAA 5 cut(s) 282, 690, 906, 930, 1133
Tru9I TTAA 5 cut(s) 282, 690, 906, 930, 1133
TscAI CASTG 4 cut(s) 303, 841, 1377, 1541
TseFI GTSAC 3 cut(s) 25, 182, 418
TseI GCWGC 6 cut(s) 62, 65, 68, 1367, 1565, 1601
Tsp45I GTSAC 3 cut(s) 25, 182, 418
TspRI CASTG 4 cut(s) 303, 841, 1377, 1541
Van91I CCANNNNNTGG 3 cut(s) 725, 840, 998
VpaK11BI GGWCC 1 cut(s) 1306
XapI RAATTY 4 cut(s) 170, 544, 1058, 1647
XceI RCATGY 1 cut(s) 350
XcmI CCANNNNNNNNNTGG 2 cut(s) 16, 1538
XmaJI CCTAGG 1 cut(s) 1031
XmnI GAANNNNTTC 1 cut(s) 457
XspI CTAG 4 cut(s) 119, 705, 1032, 1200
ZrmI AGTACT 1 cut(s) 1517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.