Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001165

Physical Location & Seq

Genomic Coordinates Reverse (-)

10216181 .. 10220965

Gene Structure 4785 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g16220.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGACCGATAAAGCTGAATCGTCCGACCCTAAGGGGACCAAGAGGGATTTCAGCACTGCGATTCTCGAGCGGAAGAAGGCGGCGAATCGCCTCGTCGTCGATGAGGCCATCAACGATGACAACTCCGTCGTCGCGCTCCACCCTGAGACCATGGAGAAGCTCCAGCTCTTCAGGGGCGACACTATTCTCATCAAGGGAAAGAAAAGGAAGGATACAATCTGCATTGCCCTTGCTGATGATACTTGTGACGAACCAAAGATTAGGATGAACAAGGTTGTGAGGAGCAACCTAAGGGTTAGGCTTGGGGATGTTGTCTCTGTCCACCAATGTGCTGATGTCAAGTACGGAAAGCGGGTGCACATTCTCCCTGTGGATGACACTATTGAAGGTGTCACTGGAAGTTTGTTTGATGCCTACTTGAAACCTTATTTCTTGGAGGCCTACCGCCCAGTGAGGAAGGGTGATCTCTTCCTTGTGAGAGGAGGAATGAGGAGTGTAGAGTTCAAGGTTATTGAGACCGATCCTTCTGAGTATTGTGTTGTTGCTCCAGACACTGAAATTTTCTGTGAGGGAGAGCCTGTAAGACGTGAGGATGAGGATAGATTAGATGAGGTTGGTTATGATGATGTTGGTGGTGTTAGGAAGCAGATGGCTCAGATTCGTGAATTAGTGGAGCTGCCATTGAGGCATCCTCAGCTCTTTAAATCAATTGGTGTGAAGCCACCAAAGGGTATTCTGTTGTATGGGCCACCTGGATCTGGTAAGACTCTAATCGCCAGAGCTGTCGCAAATGAAACTGGGGCATTCTTTTTCTGCATTAATGGGCCTGAAATCATGTCAAAACTTGCTGGAGAGAGTGAAAGCAACCTCAGGAAAGCTTTTGAGGAAGCAGAGAAGAATGCACCATCAATTATCTTTATTGATGAGATTGATTCAATTGCTCCCAAGAGAGAGAAGACACATGGTGAAGTTGAGAGGAGAATTGTGTCCCAGCTCTTGACACTTATGGATGGACTTAAATCCCGTGCACATGTAATTGTTATGGGGGCTACAAATCGTCCTAACAGTATAGACCCAGCTCTCAGAAGGTTTGGTAGATTTGATAGGGAGATAGATATCGGTGTTCCAGATGAAGTTGGGCGTCTTGAGGTCCTTCGTATTCATACAAAGAACATGAAGCTTGCTGAAGATGTTGATCTGGAAAAGATTGGCAAGGAGACGCATGGTTATGTTGGTGCTGATCTTGCTGCTCTATGTACTGAGGCTGCACTTCAGTGCATCAGAGAGAAGATGGATGTCATTGACTTGGAAGATGAGGAAATAGATGCTGAGATACTCAACTCAATGGCAGTTACAAATGAACACTTCTCTACTGCTCTCGGAACAAGTAACCCATCTGCTCTCCGTGAAACGGTTGTTGAAGTACCCAATGTTTCTTGGGATGCTATTGGAGGTCTTGAGAATGTTAAGAGAGAACTTCAAGAGACAGTTCAATATCCTGTTGAGCATCCTGAGAAATTTGAGAAATTTGGGATGTCGCCCTCAAAGGGAGTTCTATTCTATGGCCCTCCTGGGTGTGGTAAAACTCTTCTTGCCAAGGCCATTGCAAATGAGTGTCAGGCAAACTTTATCAGTATCAAGGGACCCGAATTGCTTACTATGTGGTTTGGAGAGAGTGAGGCCAATGTGCGGGAAATCTTTGACAAGGCTCGTGGATCTGCTCCATGTGTTCTGTTCTTCGACGAACTTGATTCCATTGCTACTCAGAGAGGTAGCAGTTCAGGTGATGCCGGAGGTGCTGCAGATAGGGTTTTGAACCAACTGCTTACAGAGATGGATGGAATGTCTGCAAAGAAGACTGTTTTCATTATTGGCGCCACTAACAGGCCTGACATTATAGACCCTGCACTTCTACGTCCGGGACGTCTGGATCAATTGATATATATCCCTCTCCCTGATGAGGAATCCCGCCTTCAAATTTTCAAGGCAGCCTTGAGGAAATCTCCAGTTGCCAAAGATGTGGATCTTAATGCCCTTGCCAAGTACACCCAAGGATTCAGTGGTGCTGATATCACAGAAATTTGCCAGCGTGCTTGCAAATATGCCATCAGAGAGAATATTGAGAAGGATATTGAAAGGGAGAGGAGGAGAAGCGAGAATCCTGAGGCTATGGAGGAAGATGTGGAGGATGAAGTACCTGAAATCAGGGCAGCTCACTTTGAGGAATCAATGAAGTTTGCTCGTCGGAGTGTTAGTGATGCTGATATCCGCAAATACCAGGCATTTGCTCAGACACTGCAGCAGTCAAGAGGATTTGGAACTGAGTTTAGGTTTCCAGAAACTGGCTCTGCTGCGGCCACAACTGGATCTGATCCTTTTGCAACTAGTAGTGCTGGGGCCGATGAAGATGACCTTTACAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010038 GO:0010604 GO:0012505 GO:0016020 GO:0019222 GO:0031974 GO:0031981 GO:0042176 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046686 GO:0048518 GO:0050789 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko04141 ko05134 map04141 map05134

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

808

Amino Acids

89.52

Weight (kDa)

5.07

Isoelectric Point (pI)

43.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CDC48_N	PF02359	30 - 111	1.5e-23	Cell division protein 48 (CDC48), N-terminal domain
CDC48_2	PF02933	132 - 195	1.9e-11	Cell division protein 48 (CDC48), domain 2
AAA	PF00004	245 - 374	1.4e-47	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	397 - 440	2.5e-16	AAA+ lid domain
AAA	PF00004	518 - 651	4.6e-47	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	673 - 712	6e-13	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53230
fragaria_vesca	FvH4_2g06940 FvH4_2g06950 FvH4_2g07260 FvH4_4g17680 FvH4_6g16220 FvH4_6g16220
malus_domestica	MD03G1125700.v1.1 MD04G1094400.v1.1 MD11G1142500.v1.1 MD12G1114300.v1.1 MD17G1225300.v1.1 MD17G1225400.v1.1 MD17G1225600.v1.1 MD17G1228800.v1.1
prunus_persica	Prupe.4G237600_v2.0.a1 Prupe.6G107800_v2.0.a1 Prupe.6G233700_v2.0.a1 Prupe.6G233700_v2.0.a1
pyrus_communis	pycom04g08940 pycom04g08950 pycom09g14580 pycom11g11820 pycom12g11360
rosa_chinensis	RchiOBHm_Chr3g0470061 RchiOBHm_Chr4g0421621 RchiOBHm_Chr6g0259281 RchiOBHm_Chr6g0259871
rosa_laevigata	RLG00000007663 RLG00000014503 RLG00000014543 RLG00000024300
rosa_multiflora	Rmu_co8522155.1_g000003 Rmu_sc0005600.1_g000001 Rmu_sc0009049.1_g000005 Rmu_sc0011974.1_g000005 Rmu_sc0033604.1_g000001 Rmu_sc0033605.1_g000001 Rmu_ssc0000050.1_g000089
rosa_roxburghii	Rroxscaffold_5G00363870 Rroxscaffold_6G00411220
rosa_rugosa	Rorug03G0106600 Rorug04G0173900 Rorug05G0586800 Rorug05G0590900
rosa_samantha	Rh3AG155800 Rh4CG248200 Rh6AG103300 Rh6AG103400 Rh6AG107600 Rh6BG095700 Rh6CG092600 Rh6CG096400
rosa_wichuraiana	Rw3G014670 Rw4G020040 Rw6G008920 Rw6G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	125
AatII	GACGTC	1 cut(s)	1927
AccB1I	GGYRCC	1 cut(s)	1874
AccB7I	CCANNNNNTGG	1 cut(s)	2342
AccBSI	CCGCTC	1 cut(s)	70
AccII	CGCG	1 cut(s)	134
AciI	CCGC	8 cut(s)	70, 80, 352, 445, 1690, 1969, 2269, 2354
AclWI	GGATC	7 cut(s)	515, 763, 1723, 1938, 2031, 2366, 2374
AcoI	YGGCCR	1 cut(s)	2355
AcsI	RAATTY	5 cut(s)	558, 1517, 1526, 1977, 2079
AcuI	CTGAAG	3 cut(s)	154, 1206, 1256
AcyI	GRCGYC	3 cut(s)	1141, 1875, 1924
AdeI	CACNNNGTG	1 cut(s)	965
AfaI	GTAC	5 cut(s)	344, 1258, 1425, 2045, 2196
AfiI	CCNNNNNNNGG	9 cut(s)	728, 758, 1411, 1547, 1577, 1689, 1884, 1960, 2342
AflIII	ACRYGT	1 cut(s)	1030
AhlI	ACTAGT	1 cut(s)	2384
AjiI	CACGTC	1 cut(s)	587
AjnI	CCWGG	3 cut(s)	751, 1570, 2277
AjuI	GAANNNNNNNTTGG	2 cut(s)	32, 64
AleI	CACNNNNGTG	2 cut(s)	327, 1273
Alw21I	GWGCWC	2 cut(s)	360, 1030
Alw26I	GTCTC	5 cut(s)	140, 319, 509, 1211, 1478
Alw44I	GTGCAC	2 cut(s)	356, 1026
AlwI	GGATC	7 cut(s)	515, 763, 1723, 1938, 2031, 2366, 2374
AlwNI	CAGNNNCTG	3 cut(s)	554, 2296, 2342
Ama87I	CYCGRG	1 cut(s)	65
ApaLI	GTGCAC	2 cut(s)	356, 1026
ApeKI	GCWGC	8 cut(s)	676, 1247, 1265, 1799, 1988, 2210, 2299, 2351
ApoI	RAATTY	5 cut(s)	558, 1517, 1526, 1977, 2079
AseI	ATTAAT	1 cut(s)	819
AspLEI	GCGC	2 cut(s)	136, 1877
AspS9I	GGNCC	7 cut(s)	36, 746, 824, 1150, 1565, 1643, 2397
AsuC2I	CCSGG	1 cut(s)	1920
AsuHPI	GGTGA	3 cut(s)	473, 977, 1796
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	3 cut(s)	36, 1150, 1643
AxyI	CCTNAGG	4 cut(s)	30, 290, 869, 2163
BaeGI	GKGCMC	2 cut(s)	360, 1030
BanI	GGYRCC	1 cut(s)	1874
BauI	CACGAG	1 cut(s)	1710
BbsI	GAAGAC	2 cut(s)	962, 1862
Bbv12I	GWGCWC	2 cut(s)	360, 1030
BbvCI	CCTCAGC	1 cut(s)	693
BbvI	GCAGC	8 cut(s)	663, 1234, 1252, 1786, 2000, 2222, 2311, 2338
BccI	CCATC	9 cut(s)	116, 643, 913, 1004, 1285, 1402, 1828, 1832, 2114
BciT130I	CCWGG	3 cut(s)	753, 1572, 2279
BciVI	GTATCC	1 cut(s)	205
BcnI	CCSGG	1 cut(s)	1920
BcoDI	GTCTC	5 cut(s)	140, 319, 509, 1211, 1478
BcuI	ACTAGT	1 cut(s)	2384
BfaI	CTAG	1 cut(s)	2385
BfmI	CTRYAG	2 cut(s)	1800, 2297
BfoI	RGCGCY	1 cut(s)	1878
BfuI	GTATCC	1 cut(s)	205
BglI	GCCNNNNNGGC	1 cut(s)	685
Bme1390I	CCNGG	4 cut(s)	753, 1572, 1920, 2279
Bme18I	GGWCC	3 cut(s)	36, 1150, 1643
BmeT110I	CYCGRG	1 cut(s)	65
BmgBI	CACGTC	1 cut(s)	587
BmgT120I	GGNCC	7 cut(s)	36, 746, 824, 1150, 1565, 1643, 2397
BmiI	GGNNCC	5 cut(s)	37, 1644, 1645, 1876, 2398
BmrFI	CCNGG	4 cut(s)	753, 1572, 1920, 2279
BmrI	ACTGGG	2 cut(s)	443, 807
BmsI	GCATC	8 cut(s)	400, 697, 1287, 1315, 1432, 1516, 1777, 2248
BmuI	ACTGGG	2 cut(s)	443, 807
BpiI	GAAGAC	2 cut(s)	962, 1862
BplI	GAGNNNNNCTC	4 cut(s)	676, 708, 1987, 2019
BpmI	CTGGAG	4 cut(s)	146, 531, 870, 1989
Bpu10I	CCTNAGC	1 cut(s)	693
BpuEI	CTTGAG	3 cut(s)	1166, 1478, 2014
BpuMI	CCSGG	1 cut(s)	1920
BsaBI	GATNNNNATC	4 cut(s)	1115, 1194, 1943, 2022
BsaHI	GRCGYC	3 cut(s)	1141, 1875, 1924
BsaI	GGTCTC	2 cut(s)	140, 509
BsaJI	CCNNGG	4 cut(s)	150, 1571, 1596, 2050
BsaXI	ACNNNNNCTCC	4 cut(s)	564, 594, 2239, 2269
Bsc4I	CCNNNNNNNGG	9 cut(s)	728, 758, 1411, 1547, 1577, 1689, 1884, 1960, 2342
Bse1I	ACTGG	6 cut(s)	400, 449, 802, 2006, 2347, 2368
Bse21I	CCTNAGG	4 cut(s)	30, 290, 869, 2163
Bse3DI	GCAATG	3 cut(s)	222, 1602, 1755
Bse8I	GATNNNNATC	4 cut(s)	1115, 1194, 1943, 2022
BseBI	CCWGG	3 cut(s)	753, 1572, 2279
BseDI	CCNNGG	4 cut(s)	150, 1571, 1596, 2050
BseJI	GATNNNNATC	4 cut(s)	1115, 1194, 1943, 2022
BseLI	CCNNNNNNNGG	9 cut(s)	728, 758, 1411, 1547, 1577, 1689, 1884, 1960, 2342
BseMI	GCAATG	3 cut(s)	222, 1602, 1755
BseNI	ACTGG	6 cut(s)	400, 449, 802, 2006, 2347, 2368
BseRI	GAGGAG	6 cut(s)	295, 495, 505, 991, 2158, 2161
BseSI	GKGCMC	2 cut(s)	360, 1030
BseXI	GCAGC	8 cut(s)	663, 1234, 1252, 1786, 2000, 2222, 2311, 2338
BseYI	CCCAGC	3 cut(s)	990, 1075, 2393
BsgI	GTGCAG	2 cut(s)	1251, 1890
Bsh1236I	CGCG	1 cut(s)	134
BshNI	GGYRCC	1 cut(s)	1874
BsiHKAI	GWGCWC	2 cut(s)	360, 1030
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	2 cut(s)	1791, 1919
BslFI	GGGAC	4 cut(s)	49, 973, 1656, 1935
BslI	CCNNNNNNNGG	9 cut(s)	728, 758, 1411, 1547, 1577, 1689, 1884, 1960, 2342
BsmAI	GTCTC	5 cut(s)	140, 319, 509, 1211, 1478
BsmBI	CGTCTC	1 cut(s)	1211
BsmFI	GGGAC	4 cut(s)	49, 973, 1656, 1935
BsmI	GAATGC	2 cut(s)	803, 904
Bso31I	GGTCTC	2 cut(s)	140, 509
BsoBI	CYCGRG	1 cut(s)	65
Bsp1286I	GDGCHC	2 cut(s)	360, 1030
Bsp19I	CCATGG	1 cut(s)	150
BspACI	CCGC	8 cut(s)	70, 80, 352, 445, 1690, 1969, 2269, 2354
BspFNI	CGCG	1 cut(s)	134
BspLI	GGNNCC	5 cut(s)	37, 1644, 1645, 1876, 2398
BspMAI	CTGCAG	2 cut(s)	1804, 2301
BspPI	GGATC	7 cut(s)	515, 763, 1723, 1938, 2031, 2366, 2374
BspQI	GCTCTTC	1 cut(s)	173
BspT107I	GGYRCC	1 cut(s)	1874
BspTNI	GGTCTC	2 cut(s)	140, 509
BsrBI	CCGCTC	1 cut(s)	70
BsrDI	GCAATG	3 cut(s)	222, 1602, 1755
BsrI	ACTGG	6 cut(s)	400, 449, 802, 2006, 2347, 2368
BssECI	CCNNGG	4 cut(s)	150, 1571, 1596, 2050
BssNI	GRCGYC	3 cut(s)	1141, 1875, 1924
BssSI	CACGAG	1 cut(s)	1710
BssT1I	CCWWGG	3 cut(s)	150, 1596, 2050
Bst2BI	CACGAG	1 cut(s)	1710
Bst2UI	CCWGG	3 cut(s)	753, 1572, 2279
Bst4CI	ACNGT	4 cut(s)	1067, 1414, 1489, 1861
Bst6I	CTCTTC	3 cut(s)	173, 473, 1593
BstACI	GRCGYC	3 cut(s)	1141, 1875, 1924
BstC8I	GCNNGC	4 cut(s)	1182, 2087, 2091, 2095
BstDSI	CCRYGG	1 cut(s)	150
BstFNI	CGCG	1 cut(s)	134
BstH2I	RGCGCY	1 cut(s)	1878
BstHHI	GCGC	2 cut(s)	136, 1877
BstMAI	GTCTC	5 cut(s)	140, 319, 509, 1211, 1478
BstMWI	GCNNNNNNNGC	4 cut(s)	685, 694, 1244, 1796
BstNI	CCWGG	3 cut(s)	753, 1572, 2279
BstNSI	RCATGY	1 cut(s)	1034
BstSCI	CCNGG	4 cut(s)	751, 1570, 1918, 2277
BstSFI	CTRYAG	2 cut(s)	1800, 2297
BstSLI	GKGCMC	2 cut(s)	360, 1030
BstUI	CGCG	1 cut(s)	134
BstV1I	GCAGC	8 cut(s)	663, 1234, 1252, 1786, 2000, 2222, 2311, 2338
BstV2I	GAAGAC	2 cut(s)	962, 1862
BstX2I	RGATCY	4 cut(s)	755, 1715, 2023, 2366
BstXI	CCANNNNNNTGG	1 cut(s)	2020
BstYI	RGATCY	4 cut(s)	755, 1715, 2023, 2366
Bsu36I	CCTNAGG	4 cut(s)	30, 290, 869, 2163
BsuI	GTATCC	1 cut(s)	205
BtgI	CCRYGG	1 cut(s)	150
BtrI	CACGTC	1 cut(s)	587
BtsI	GCAGTG	2 cut(s)	54, 2294
BtsIMutI	CAGTG	7 cut(s)	54, 393, 456, 552, 1280, 2065, 2294
Cac8I	GCNNGC	4 cut(s)	1182, 2087, 2091, 2095
CaiI	CAGNNNCTG	3 cut(s)	554, 2296, 2342
CfoI	GCGC	2 cut(s)	136, 1877
Cfr13I	GGNCC	7 cut(s)	36, 746, 824, 1150, 1565, 1643, 2397
CseI	GACGC	2 cut(s)	1130, 1228
Csp6I	GTAC	5 cut(s)	343, 1257, 1424, 2044, 2195
CspCI	CAANNNNNGTGG	2 cut(s)	1693, 1728
CviAII	CATG	7 cut(s)	151, 835, 962, 1031, 1174, 1223, 1725
CviQI	GTAC	5 cut(s)	343, 1257, 1424, 2044, 2195
DinI	GGCGCC	1 cut(s)	1876
DraI	TTTAAA	1 cut(s)	703
DraIII	CACNNNGTG	1 cut(s)	965
DrdI	GACNNNNNNGTC	1 cut(s)	125
DseDI	GACNNNNNNGTC	1 cut(s)	125
EaeI	YGGCCR	1 cut(s)	2355
Eam1104I	CTCTTC	3 cut(s)	173, 473, 1593
EarI	CTCTTC	3 cut(s)	173, 473, 1593
Eco130I	CCWWGG	3 cut(s)	150, 1596, 2050
Eco147I	AGGCCT	2 cut(s)	440, 1888
Eco31I	GGTCTC	2 cut(s)	140, 509
Eco32I	GATATC	3 cut(s)	1117, 2071, 2266
Eco47I	GGWCC	3 cut(s)	36, 1150, 1643
Eco57I	CTGAAG	3 cut(s)	154, 1206, 1256
Eco81I	CCTNAGG	4 cut(s)	30, 290, 869, 2163
Eco88I	CYCGRG	1 cut(s)	65
EcoO109I	RGGNCCY	2 cut(s)	1150, 1643
EcoRII	CCWGG	3 cut(s)	751, 1570, 2277
EcoRV	GATATC	3 cut(s)	1117, 2071, 2266
EcoT14I	CCWWGG	3 cut(s)	150, 1596, 2050
EgeI	GGCGCC	1 cut(s)	1876
EheI	GGCGCC	1 cut(s)	1876
ErhI	CCWWGG	3 cut(s)	150, 1596, 2050
Esp3I	CGTCTC	1 cut(s)	1211
FaeI	CATG	7 cut(s)	154, 838, 965, 1034, 1177, 1226, 1728
FalI	AAGNNNNNCTT	3 cut(s)	1976, 2008, 2397
FaqI	GGGAC	4 cut(s)	49, 973, 1656, 1935
FatI	CATG	7 cut(s)	150, 834, 961, 1030, 1173, 1222, 1724
FauI	CCCGC	3 cut(s)	345, 1683, 1976
FspBI	CTAG	1 cut(s)	2385
GlaI	GCGC	2 cut(s)	135, 1876
GsaI	CCCAGC	3 cut(s)	994, 1079, 2397
GsuI	CTGGAG	4 cut(s)	146, 531, 870, 1989
HaeII	RGCGCY	1 cut(s)	1878
HapII	CCGG	2 cut(s)	1791, 1919
HgaI	GACGC	2 cut(s)	1130, 1228
HhaI	GCGC	2 cut(s)	136, 1877
Hin1I	GRCGYC	3 cut(s)	1141, 1875, 1924
Hin1II	CATG	7 cut(s)	154, 838, 965, 1034, 1177, 1226, 1728
Hin6I	GCGC	2 cut(s)	134, 1875
HinP1I	GCGC	2 cut(s)	134, 1875
HindIII	AAGCTT	2 cut(s)	876, 1178
HpaII	CCGG	2 cut(s)	1791, 1919
HphI	GGTGA	3 cut(s)	473, 977, 1796
Hpy166II	GTNNAC	4 cut(s)	322, 358, 1028, 2046
Hpy8I	GTNNAC	4 cut(s)	322, 358, 1028, 2046
Hpy99I	CGWCG	6 cut(s)	98, 101, 131, 134, 1745, 2247
HpyAV	CCTTC	9 cut(s)	70, 202, 380, 451, 534, 1080, 1163, 1982, 2119
HpyCH4III	ACNGT	4 cut(s)	1067, 1414, 1489, 1861
HpyCH4IV	ACGT	3 cut(s)	586, 1915, 1924
HpyF10VI	GCNNNNNNNGC	4 cut(s)	685, 694, 1244, 1796
HpySE526I	ACGT	3 cut(s)	586, 1915, 1924
Hsp92I	GRCGYC	3 cut(s)	1141, 1875, 1924
Hsp92II	CATG	7 cut(s)	154, 838, 965, 1034, 1177, 1226, 1728
HspAI	GCGC	2 cut(s)	134, 1875
KasI	GGCGCC	1 cut(s)	1874
KflI	GGGWCCC	1 cut(s)	1643
LguI	GCTCTTC	1 cut(s)	173
LmnI	GCTCC	7 cut(s)	141, 165, 282, 550, 673, 946, 1726
Lsp1109I	GCAGC	8 cut(s)	663, 1234, 1252, 1786, 2000, 2222, 2311, 2338
LweI	GCATC	8 cut(s)	400, 697, 1287, 1315, 1432, 1516, 1777, 2248
MaeI	CTAG	1 cut(s)	2385
MaeII	ACGT	3 cut(s)	586, 1915, 1924
MaeIII	GTNAC	4 cut(s)	245, 391, 1351, 1388
MbiI	CCGCTC	1 cut(s)	70
MfeI	CAATTG	3 cut(s)	708, 936, 1934
MflI	RGATCY	4 cut(s)	755, 1715, 2023, 2366
MhlI	GDGCHC	2 cut(s)	360, 1030
Mly113I	GGCGCC	1 cut(s)	1875
MlyI	GAGTC	1 cut(s)	760
MmeI	TCCRAC	2 cut(s)	48, 2225
MseI	TTAA	5 cut(s)	702, 819, 1017, 1467, 2028
MslI	CAYNNNNRTG	3 cut(s)	327, 1227, 1273
MspI	CCGG	2 cut(s)	1791, 1919
MspR9I	CCNGG	4 cut(s)	753, 1572, 1920, 2279
MunI	CAATTG	3 cut(s)	708, 936, 1934
Mva1269I	GAATGC	2 cut(s)	803, 904
MvaI	CCWGG	3 cut(s)	753, 1572, 2279
MvnI	CGCG	1 cut(s)	134
MwoI	GCNNNNNNNGC	4 cut(s)	685, 694, 1244, 1796
NarI	GGCGCC	1 cut(s)	1875
NciI	CCSGG	1 cut(s)	1920
NcoI	CCATGG	1 cut(s)	150
NlaIII	CATG	7 cut(s)	154, 838, 965, 1034, 1177, 1226, 1728
NlaIV	GGNNCC	5 cut(s)	37, 1644, 1645, 1876, 2398
NmuCI	GTSAC	2 cut(s)	245, 391
NspI	RCATGY	1 cut(s)	1034
OliI	CACNNNNGTG	2 cut(s)	327, 1273
PaeR7I	CTCGAG	1 cut(s)	65
PceI	AGGCCT	2 cut(s)	440, 1888
PciI	ACATGT	1 cut(s)	1030
PciSI	GCTCTTC	1 cut(s)	173
PcsI	WCGNNNNNNNCGW	1 cut(s)	1921
PctI	GAATGC	2 cut(s)	803, 904
PflMI	CCANNNNNTGG	1 cut(s)	2342
PfoI	TCCNGGA	1 cut(s)	1918
PleI	GAGTC	1 cut(s)	760
PluTI	GGCGCC	1 cut(s)	1878
PpsI	GAGTC	1 cut(s)	760
PpuMI	RGGWCCY	2 cut(s)	1150, 1643
PscI	ACATGT	1 cut(s)	1030
PshBI	ATTAAT	1 cut(s)	819
Psp5II	RGGWCCY	2 cut(s)	1150, 1643
Psp6I	CCWGG	3 cut(s)	751, 1570, 2277
PspFI	CCCAGC	3 cut(s)	990, 1075, 2393
PspGI	CCWGG	3 cut(s)	751, 1570, 2277
PspN4I	GGNNCC	5 cut(s)	37, 1644, 1645, 1876, 2398
PspPI	GGNCC	7 cut(s)	36, 746, 824, 1150, 1565, 1643, 2397
PspPPI	RGGWCCY	2 cut(s)	1150, 1643
PstI	CTGCAG	2 cut(s)	1804, 2301
PstNI	CAGNNNCTG	3 cut(s)	554, 2296, 2342
PsuI	RGATCY	4 cut(s)	755, 1715, 2023, 2366
RsaI	GTAC	5 cut(s)	344, 1258, 1425, 2045, 2196
RsaNI	GTAC	5 cut(s)	343, 1257, 1424, 2044, 2195
RseI	CAYNNNNRTG	3 cut(s)	327, 1227, 1273
SapI	GCTCTTC	1 cut(s)	173
SaqAI	TTAA	5 cut(s)	702, 819, 1017, 1467, 2028
Sau96I	GGNCC	7 cut(s)	36, 746, 824, 1150, 1565, 1643, 2397
SchI	GAGTC	1 cut(s)	760
ScrFI	CCNGG	4 cut(s)	753, 1572, 1920, 2279
SduI	GDGCHC	2 cut(s)	360, 1030
SfaNI	GCATC	8 cut(s)	400, 697, 1287, 1315, 1432, 1516, 1777, 2248
SfcI	CTRYAG	2 cut(s)	1800, 2297
SfoI	GGCGCC	1 cut(s)	1876
Sfr274I	CTCGAG	1 cut(s)	65
SinI	GGWCC	3 cut(s)	36, 1150, 1643
SlaI	CTCGAG	1 cut(s)	65
SmiMI	CAYNNNNRTG	3 cut(s)	327, 1227, 1273
SmlI	CTYRAG	4 cut(s)	65, 1145, 1457, 1993
SmoI	CTYRAG	4 cut(s)	65, 1145, 1457, 1993
SpeI	ACTAGT	1 cut(s)	2384
SseBI	AGGCCT	2 cut(s)	440, 1888
SsiI	CCGC	8 cut(s)	70, 80, 352, 445, 1690, 1969, 2269, 2354
SspDI	GGCGCC	1 cut(s)	1874
SspI	AATATT	1 cut(s)	2119
SspMI	CTAG	1 cut(s)	2385
StuI	AGGCCT	2 cut(s)	440, 1888
StyD4I	CCNGG	4 cut(s)	751, 1570, 1918, 2277
StyI	CCWWGG	3 cut(s)	150, 1596, 2050
TaaI	ACNGT	4 cut(s)	1067, 1414, 1489, 1861
TaiI	ACGT	3 cut(s)	589, 1918, 1927
TaqI	TCGA	3 cut(s)	66, 99, 1740
TaqII	GACCGA	2 cut(s)	20, 533
TatI	WGTACW	2 cut(s)	1256, 2043
TauI	GCSGC	2 cut(s)	83, 2357
Tru1I	TTAA	5 cut(s)	702, 819, 1017, 1467, 2028
Tru9I	TTAA	5 cut(s)	702, 819, 1017, 1467, 2028
TscAI	CASTG	7 cut(s)	61, 400, 456, 559, 1280, 2065, 2301
TseFI	GTSAC	2 cut(s)	245, 391
TseI	GCWGC	8 cut(s)	676, 1247, 1265, 1799, 1988, 2210, 2299, 2351
Tsp45I	GTSAC	2 cut(s)	245, 391
TspGWI	ACGGA	3 cut(s)	115, 360, 1394
TspRI	CASTG	7 cut(s)	61, 400, 456, 559, 1280, 2065, 2301
Van91I	CCANNNNNTGG	1 cut(s)	2342
VneI	GTGCAC	2 cut(s)	356, 1026
VpaK11BI	GGWCC	3 cut(s)	36, 1150, 1643
VspI	ATTAAT	1 cut(s)	819
XapI	RAATTY	5 cut(s)	558, 1517, 1526, 1977, 2079
XceI	RCATGY	1 cut(s)	1034
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2057
XhoI	CTCGAG	1 cut(s)	65
XspI	CTAG	1 cut(s)	2385
ZraI	GACGTC	1 cut(s)	1925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.