Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001165

Physical Location & Seq

Genomic Coordinates Forward (+)

23551356 .. 23556354

Gene Structure 4999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G233700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGACTGACAAGGCTGAATCTTCAGACTCTAAGGGAACGAAAAGGGACTTCAGCACGGCGATCCTTGAGCGCAAGAAGGCTGCGAATCGGCTTGTTGTGGATGATGCTATCAACGATGACAACTCGGTCGTCGCGCTCCATCCAGATACCATGGAGAAGCTCCAGCTCTTTCGTGGTGACACAATCTTGATCAAGGGAAAGAAAAGGAAAGATACAATCTGCATTGCCCTGGCTGATGATACATGTGAGGAACCAAAGATAAGGATGAACAAGGTTGTCAGGAGCAACCTAAGGGTTAGGCTGGGGGATGTTGTTTCTGTTCACCAATGTGCTGATGTCAAGTATGGAAAGCGTGTCCACATTCTTCCTGTGGATGACACTATTGAAGGGGTCACTGGAAATCTGTTTGATGCATACTTGAAACCTTATTTCCTGGAGGCCTACCGTCCAGTGAGGAAGGGTGATCTCTTCCTTGTGAGAGGAGGAATGAGGAGTGTAGAATTTAAGGTTATTGAAACTGACCCTCCTGAGTACTGTGTGGTCGCTCCCGACACTGAAATCTTCTGTGAGGGGGAGCCTGTGAAAAGGGAGGATGAGGAGAGATTAAATGAGGTTGGCTATGATGATGTTGGTGGAGTTAGGAAACAGATGGCTCAGATTCGTGAATTAGTGGAGCTGCCACTGAGGCATCCTCAACTATTTAAATCGATTGGTGTGAAGCCACCAAAGGGTATTCTGCTGTATGGACCTCCTGGATCGGGTAAGACTCTAATTGCCCGAGCTGTGGCTAATGAAACTGGGGCATTCTTTTTCTGCATCAATGGACCTGAAATCATGTCAAAATTGGCTGGGGAGAGTGAAAGCAATCTCAGGAAAGCTTTTGAGGAAGCAGAGAAGAATGCACCATCAATTATCTTTATTGATGAAATTGATTCAATTGCTCCCAAGAGAGAGAAGACACATGGAGAAGTTGAGAGGAGGATTGTTTCCCAGCTCTTGACGCTCATGGATGGACTAAAGTCTCGTGCACATGTAATTGTTATGGGGGCTACAAATCGGCCAAACAGTATTGATCCAGCTCTCAGAAGGTTTGGAAGATTTGATAGGGAAATAGATATTGGTGTACCAGATGAAGTTGGGCGTCTCGAGGTTGTCCGTATTCATACAAAGAACATGAAGCTTGCTGAAGATGTTGATTTGGAAAAGATAGCTAAGGACACACACGGTTATGTTGGTGCTGATCTAGCTGCTTTGTGTACTGAGGCTGCTCTTCAATGCATCAGAGAGAAGATGGATGTGATTGACTTAGAAGATGAGGAAATAGATGCTGAGATTCTGAATTCAATGGCAGTGACAAATGAGCACTTCAAGACTGCTCTTGGCACAAGCAACCCATCTGCTCTTCGTGAAACAGTTGTTGAAGTGCCCAATGTTAGCTGGGAAGATATTGGAGGTCTTGACAATGTTAAGCGAGAACTTCAAGAGACTGTTCAGTATCCTGTTGAGCATCCTGAGAAATTTGAGAAATTTGGAATGTCACCTTCAAAGGGAGTTCTTTTCTATGGTCCTCCTGGATGTGGTAAAACTCTTCTCGCCAAAGCTATTGCCAATGAGTGTCAAGCAAACTTCATCAGTGTCAAGGGACCTGAATTGCTAACGATGTGGTTTGGAGAGAGTGAGGCCAATGTGAGGGAAATTTTCGACAAGGCCCGTGGGTCTGCTCCATGTGTCCTGTTCTTTGATGAACTCGATTCCATTGCTACTCAGAGAGGTAGTAGCGTAGGTGATGCTGGGGGTGCAGCTGACAGGGTTTTGAACCAACTCCTTACAGAAATGGACGGAATGACTGCTAAGAAAACTGTTTTCATTATTGGGGCTACCAACAGACCTGACATTATAGACCCTGCACTTCTACGTCCAGGACGTCTGGATCAGTTAATTTACATCCCTCTCCCTGATGAGGAATCTCGCTTTCAAATATTCAAATCTTGCTTGAGGAAATCTCCAGTTTCCAAAGATGTGGACATCAGAGCACTTGCCAAGTACACCCAAGGATTCAGTGGTGCTGATATAACTGAAATATGCCAGCGTGCTTGCAAATATGCCATTAGAGAGAATATTGAGAAGGATATCGAGAGGGAGAGGAGGAGAAGCGAGAATCCTGAGGCAATGGAGGAGGATGTTGATGACGAAGTAGCAGAGATCAGGGCAGCTCATTTTGAGGAGTCGATGAAGTATGCTCGTAGGAGTGTTAGTGACGCTGATATCCGCAAATACCAGGCATTTGCGCAGACATTGCAGCAGTCAAGAGGGTTTGGAACCGAGTTCAGGTTCGCAGACAATCCTTCTGGCACAGCCGCTGGATCCGACCCTTTTGCAACTGTTGCTGCTGGGGCTGATGAAGATGACCTTTACAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010038 GO:0010604 GO:0012505 GO:0016020 GO:0019222 GO:0031974 GO:0031981 GO:0042176 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046686 GO:0048518 GO:0050789 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko04141 ko05134 map04141 map05134

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

807

Amino Acids

89.61

Weight (kDa)

5.11

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53230
fragaria_vesca	FvH4_2g06940 FvH4_2g06950 FvH4_2g07260 FvH4_4g17680 FvH4_6g16220 FvH4_6g16220
malus_domestica	MD03G1125700.v1.1 MD04G1094400.v1.1 MD11G1142500.v1.1 MD12G1114300.v1.1 MD17G1225300.v1.1 MD17G1225400.v1.1 MD17G1225600.v1.1 MD17G1228800.v1.1
prunus_persica	Prupe.4G237600_v2.0.a1 Prupe.6G107800_v2.0.a1 Prupe.6G233700_v2.0.a1 Prupe.6G233700_v2.0.a1
pyrus_communis	pycom04g08940 pycom04g08950 pycom09g14580 pycom11g11820 pycom12g11360
rosa_chinensis	RchiOBHm_Chr3g0470061 RchiOBHm_Chr4g0421621 RchiOBHm_Chr6g0259281 RchiOBHm_Chr6g0259871
rosa_laevigata	RLG00000007663 RLG00000014503 RLG00000014543 RLG00000024300
rosa_multiflora	Rmu_co8522155.1_g000003 Rmu_sc0005600.1_g000001 Rmu_sc0009049.1_g000005 Rmu_sc0011974.1_g000005 Rmu_sc0033604.1_g000001 Rmu_sc0033605.1_g000001 Rmu_ssc0000050.1_g000089
rosa_roxburghii	Rroxscaffold_5G00363870 Rroxscaffold_6G00411220
rosa_rugosa	Rorug03G0106600 Rorug04G0173900 Rorug05G0586800 Rorug05G0590900
rosa_samantha	Rh3AG155800 Rh4CG248200 Rh6AG103300 Rh6AG103400 Rh6AG107600 Rh6BG095700 Rh6CG092600 Rh6CG096400
rosa_wichuraiana	Rw3G014670 Rw4G020040 Rw6G008920 Rw6G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	125
AatII	GACGTC	1 cut(s)	1927
Acc16I	TGCGCA	1 cut(s)	2289
AccII	CGCG	1 cut(s)	134
AciI	CCGC	2 cut(s)	2269, 2358
AclWI	GGATC	6 cut(s)	55, 763, 1067, 1938, 2358, 2371
AcoI	YGGCCR	1 cut(s)	1058
AcsI	RAATTY	5 cut(s)	500, 1339, 1517, 1526, 1695
AcuI	CTGAAG	3 cut(s)	6, 34, 1206
AcyI	GRCGYC	2 cut(s)	1141, 1924
AfaI	GTAC	4 cut(s)	533, 1125, 1258, 2045
AfiI	CCNNNNNNNGG	8 cut(s)	728, 758, 784, 1547, 1577, 1689, 1960, 2328
AflIII	ACRYGT	2 cut(s)	242, 1030
AjnI	CCWGG	6 cut(s)	228, 432, 751, 1570, 1918, 2277
AjuI	GAANNNNNNNTTGG	2 cut(s)	1101, 1133
AleI	CACNNNNGTG	1 cut(s)	327
Alw21I	GWGCWC	3 cut(s)	1030, 1365, 2035
Alw26I	GTCTC	3 cut(s)	1026, 1148, 1478
Alw44I	GTGCAC	1 cut(s)	1026
AlwI	GGATC	6 cut(s)	55, 763, 1067, 1938, 2358, 2371
AlwNI	CAGNNNCTG	1 cut(s)	2360
Ama87I	CYCGRG	2 cut(s)	777, 1145
AoxI	GGCC	4 cut(s)	438, 1058, 1680, 1707
ApaLI	GTGCAC	1 cut(s)	1026
ApeKI	GCWGC	8 cut(s)	80, 676, 1247, 1265, 1799, 2210, 2299, 2387
ApoI	RAATTY	5 cut(s)	500, 1339, 1517, 1526, 1695
AspLEI	GCGC	3 cut(s)	72, 136, 2290
AspS9I	GGNCC	5 cut(s)	746, 824, 1565, 1643, 1708
AsuHPI	GGTGA	5 cut(s)	188, 314, 473, 1530, 1796
AvaI	CYCGRG	2 cut(s)	777, 1145
AvaII	GGWCC	4 cut(s)	746, 824, 1565, 1643
AxyI	CCTNAGG	2 cut(s)	290, 2163
BaeGI	GKGCMC	2 cut(s)	1030, 1428
BamHI	GGATCC	1 cut(s)	2363
BauI	CACGAG	1 cut(s)	1023
BbsI	GAAGAC	1 cut(s)	962
Bbv12I	GWGCWC	3 cut(s)	1030, 1365, 2035
BbvI	GCAGC	8 cut(s)	67, 663, 1234, 1252, 1811, 2222, 2311, 2374
BccI	CCATC	6 cut(s)	147, 643, 913, 1004, 1285, 1402
BceAI	ACGGC	1 cut(s)	72
BcgI	CGANNNNNNTGC	4 cut(s)	1739, 1773, 2357, 2391
BciT130I	CCWGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
BciVI	GTATCC	1 cut(s)	1506
BclI	TGATCA	1 cut(s)	189
BcoDI	GTCTC	3 cut(s)	1026, 1148, 1478
BfaI	CTAG	2 cut(s)	1244, 2419
BfuI	GTATCC	1 cut(s)	1506
BglI	GCCNNNNNGGC	1 cut(s)	685
BisI	GCNGC	9 cut(s)	81, 677, 1248, 1266, 1800, 2211, 2300, 2358, 2388
BlsI	GCNGC	9 cut(s)	82, 678, 1249, 1267, 1801, 2212, 2301, 2359, 2389
BmcAI	AGTACT	1 cut(s)	533
Bme1390I	CCNGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
Bme18I	GGWCC	4 cut(s)	746, 824, 1565, 1643
BmeT110I	CYCGRG	2 cut(s)	777, 1145
BmgT120I	GGNCC	5 cut(s)	746, 824, 1565, 1643, 1708
BmiI	GGNNCC	5 cut(s)	252, 576, 1644, 2320, 2365
BmrFI	CCNGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
BmrI	ACTGGG	1 cut(s)	807
BmsI	GCATC	8 cut(s)	94, 400, 697, 825, 1287, 1315, 1516, 1777
BmuI	ACTGGG	1 cut(s)	807
BoxI	GACNNNNGTC	1 cut(s)	1018
BpiI	GAAGAC	1 cut(s)	962
BplI	GAGNNNNNCTC	4 cut(s)	676, 708, 1987, 2019
BpmI	CTGGAG	3 cut(s)	146, 455, 1989
Bpu10I	CCTNAGC	1 cut(s)	1212
BpuEI	CTTGAG	2 cut(s)	86, 2014
Bsa29I	ATCGAT	1 cut(s)	707
BsaHI	GRCGYC	2 cut(s)	1141, 1924
BsaJI	CCNNGG	4 cut(s)	150, 228, 1711, 2050
BsaXI	ACNNNNNCTCC	4 cut(s)	508, 538, 2239, 2269
Bsc4I	CCNNNNNNNGG	8 cut(s)	728, 758, 784, 1547, 1577, 1689, 1960, 2328
Bse1I	ACTGG	4 cut(s)	400, 449, 802, 2006
Bse21I	CCTNAGG	2 cut(s)	290, 2163
Bse3DI	GCAATG	4 cut(s)	222, 1755, 2175, 2294
BseBI	CCWGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
BseCI	ATCGAT	1 cut(s)	707
BseDI	CCNNGG	4 cut(s)	150, 228, 1711, 2050
BseLI	CCNNNNNNNGG	8 cut(s)	728, 758, 784, 1547, 1577, 1689, 1960, 2328
BseMI	GCAATG	4 cut(s)	222, 1755, 2175, 2294
BseNI	ACTGG	4 cut(s)	400, 449, 802, 2006
BseRI	GAGGAG	8 cut(s)	495, 505, 611, 991, 2158, 2161, 2189, 2237
BseSI	GKGCMC	2 cut(s)	1030, 1428
BseXI	GCAGC	8 cut(s)	67, 663, 1234, 1252, 1811, 2222, 2311, 2374
BseYI	CCCAGC	6 cut(s)	301, 848, 990, 1437, 1790, 2390
BsgI	GTGCAG	2 cut(s)	1818, 1890
Bsh1236I	CGCG	1 cut(s)	134
Bsh1285I	CGRYCG	1 cut(s)	129
BshFI	GGCC	4 cut(s)	440, 1060, 1682, 1709
BshVI	ATCGAT	1 cut(s)	707
BsiEI	CGRYCG	1 cut(s)	129
BsiHKAI	GWGCWC	3 cut(s)	1030, 1365, 2035
BsiHKCI	CYCGRG	2 cut(s)	777, 1145
BslFI	GGGAC	2 cut(s)	59, 1656
BslI	CCNNNNNNNGG	8 cut(s)	728, 758, 784, 1547, 1577, 1689, 1960, 2328
BsmAI	GTCTC	3 cut(s)	1026, 1148, 1478
BsmBI	CGTCTC	1 cut(s)	1148
BsmFI	GGGAC	2 cut(s)	59, 1656
BsmI	GAATGC	2 cut(s)	803, 904
BsnI	GGCC	4 cut(s)	440, 1060, 1682, 1709
BsoBI	CYCGRG	2 cut(s)	777, 1145
Bsp1286I	GDGCHC	4 cut(s)	1030, 1365, 1428, 2035
Bsp143I	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
Bsp19I	CCATGG	1 cut(s)	150
BspACI	CCGC	2 cut(s)	2269, 2358
BspANI	GGCC	4 cut(s)	440, 1060, 1682, 1709
BspDI	ATCGAT	1 cut(s)	707
BspFNI	CGCG	1 cut(s)	134
BspLI	GGNNCC	5 cut(s)	252, 576, 1644, 2320, 2365
BspPI	GGATC	6 cut(s)	55, 763, 1067, 1938, 2358, 2371
BspQI	GCTCTTC	2 cut(s)	1275, 1407
BsrDI	GCAATG	4 cut(s)	222, 1755, 2175, 2294
BsrI	ACTGG	4 cut(s)	400, 449, 802, 2006
BssECI	CCNNGG	4 cut(s)	150, 228, 1711, 2050
BssMI	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
BssNI	GRCGYC	2 cut(s)	1141, 1924
BssSI	CACGAG	1 cut(s)	1023
BssT1I	CCWWGG	2 cut(s)	150, 2050
Bst2BI	CACGAG	1 cut(s)	1023
Bst2UI	CCWGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
Bst4CI	ACNGT	8 cut(s)	446, 536, 1067, 1226, 1414, 1489, 1861, 2383
Bst6I	CTCTTC	4 cut(s)	473, 1275, 1407, 1593
BstACI	GRCGYC	2 cut(s)	1141, 1924
BstAPI	GCANNNNNTGC	2 cut(s)	2296, 2384
BstC8I	GCNNGC	4 cut(s)	1182, 2087, 2091, 2095
BstDSI	CCRYGG	2 cut(s)	150, 1711
BstFNI	CGCG	1 cut(s)	134
BstHHI	GCGC	3 cut(s)	72, 136, 2290
BstKTI	GATC	9 cut(s)	63, 192, 466, 758, 1075, 1243, 1933, 2205, 2366
BstMAI	GTCTC	3 cut(s)	1026, 1148, 1478
BstMBI	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
BstMCI	CGRYCG	1 cut(s)	129
BstMWI	GCNNNNNNNGC	7 cut(s)	685, 1000, 1244, 1796, 2296, 2384, 2393
BstNI	CCWGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
BstNSI	RCATGY	2 cut(s)	246, 1034
BstPAI	GACNNNNGTC	1 cut(s)	1018
BstSCI	CCNGG	6 cut(s)	228, 432, 751, 1570, 1918, 2277
BstSLI	GKGCMC	2 cut(s)	1030, 1428
BstUI	CGCG	1 cut(s)	134
BstV1I	GCAGC	8 cut(s)	67, 663, 1234, 1252, 1811, 2222, 2311, 2374
BstV2I	GAAGAC	1 cut(s)	962
BstX2I	RGATCY	1 cut(s)	2363
BstXI	CCANNNNNNTGG	1 cut(s)	2020
BstYI	RGATCY	1 cut(s)	2363
Bsu15I	ATCGAT	1 cut(s)	707
Bsu36I	CCTNAGG	2 cut(s)	290, 2163
BsuI	GTATCC	1 cut(s)	1506
BsuRI	GGCC	4 cut(s)	440, 1060, 1682, 1709
BsuTUI	ATCGAT	1 cut(s)	707
BtgI	CCRYGG	2 cut(s)	150, 1711
BtsI	GCAGTG	1 cut(s)	1356
BtsIMutI	CAGTG	7 cut(s)	393, 456, 552, 680, 1356, 1639, 2065
Cac8I	GCNNGC	4 cut(s)	1182, 2087, 2091, 2095
CaiI	CAGNNNCTG	1 cut(s)	2360
CfoI	GCGC	3 cut(s)	72, 136, 2290
Cfr13I	GGNCC	5 cut(s)	746, 824, 1565, 1643, 1708
ClaI	ATCGAT	1 cut(s)	707
CseI	GACGC	3 cut(s)	1009, 1130, 2267
Csp6I	GTAC	4 cut(s)	532, 1124, 1257, 2044
CspCI	CAANNNNNGTGG	2 cut(s)	1693, 1728
CviAII	CATG	8 cut(s)	151, 243, 835, 962, 1006, 1031, 1174, 1725
CviQI	GTAC	4 cut(s)	532, 1124, 1257, 2044
DpnI	GATC	9 cut(s)	62, 191, 465, 757, 1074, 1242, 1932, 2204, 2365
DpnII	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
DraI	TTTAAA	1 cut(s)	703
DrdI	GACNNNNNNGTC	1 cut(s)	125
DseDI	GACNNNNNNGTC	1 cut(s)	125
EaeI	YGGCCR	1 cut(s)	1058
Eam1104I	CTCTTC	4 cut(s)	473, 1275, 1407, 1593
EarI	CTCTTC	4 cut(s)	473, 1275, 1407, 1593
Eco130I	CCWWGG	2 cut(s)	150, 2050
Eco147I	AGGCCT	1 cut(s)	440
Eco32I	GATATC	2 cut(s)	2131, 2266
Eco47I	GGWCC	4 cut(s)	746, 824, 1565, 1643
Eco57I	CTGAAG	3 cut(s)	6, 34, 1206
Eco81I	CCTNAGG	2 cut(s)	290, 2163
Eco88I	CYCGRG	2 cut(s)	777, 1145
EcoO109I	RGGNCCY	1 cut(s)	1643
EcoRI	GAATTC	1 cut(s)	1339
EcoRII	CCWGG	6 cut(s)	228, 432, 751, 1570, 1918, 2277
EcoRV	GATATC	2 cut(s)	2131, 2266
EcoT14I	CCWWGG	2 cut(s)	150, 2050
EcoT22I	ATGCAT	2 cut(s)	415, 1280
ErhI	CCWWGG	2 cut(s)	150, 2050
Esp3I	CGTCTC	1 cut(s)	1148
FaeI	CATG	8 cut(s)	154, 246, 838, 965, 1009, 1034, 1177, 1728
FalI	AAGNNNNNCTT	1 cut(s)	2394
FaqI	GGGAC	2 cut(s)	59, 1656
FatI	CATG	8 cut(s)	150, 242, 834, 961, 1005, 1030, 1173, 1724
FbaI	TGATCA	1 cut(s)	189
Fnu4HI	GCNGC	9 cut(s)	81, 677, 1248, 1266, 1800, 2211, 2300, 2358, 2388
Fsp4HI	GCNGC	9 cut(s)	81, 677, 1248, 1266, 1800, 2211, 2300, 2358, 2388
FspBI	CTAG	2 cut(s)	1244, 2419
FspI	TGCGCA	1 cut(s)	2289
GlaI	GCGC	3 cut(s)	71, 135, 2289
GluI	GCNGC	9 cut(s)	81, 677, 1248, 1266, 1800, 2211, 2300, 2358, 2388
GsaI	CCCAGC	6 cut(s)	305, 852, 994, 1441, 1794, 2394
GsuI	CTGGAG	3 cut(s)	146, 455, 1989
HaeIII	GGCC	4 cut(s)	440, 1060, 1682, 1709
HgaI	GACGC	3 cut(s)	1009, 1130, 2267
HhaI	GCGC	3 cut(s)	72, 136, 2290
Hin1I	GRCGYC	2 cut(s)	1141, 1924
Hin1II	CATG	8 cut(s)	154, 246, 838, 965, 1009, 1034, 1177, 1728
Hin6I	GCGC	3 cut(s)	70, 134, 2288
HinP1I	GCGC	3 cut(s)	70, 134, 2288
HindIII	AAGCTT	2 cut(s)	876, 1178
HphI	GGTGA	5 cut(s)	188, 314, 473, 1530, 1796
Hpy166II	GTNNAC	7 cut(s)	322, 358, 1028, 1124, 1257, 2023, 2046
Hpy188I	TCNGA	8 cut(s)	25, 657, 1085, 1283, 1338, 1767, 2030, 2368
Hpy8I	GTNNAC	7 cut(s)	322, 358, 1028, 1124, 1257, 2023, 2046
Hpy99I	CGWCG	1 cut(s)	134
HpyAV	CCTTC	7 cut(s)	70, 380, 451, 1080, 1551, 2119, 2355
HpyCH4III	ACNGT	8 cut(s)	446, 536, 1067, 1226, 1414, 1489, 1861, 2383
HpyCH4IV	ACGT	2 cut(s)	1915, 1924
HpyF10VI	GCNNNNNNNGC	7 cut(s)	685, 1000, 1244, 1796, 2296, 2384, 2393
HpySE526I	ACGT	2 cut(s)	1915, 1924
Hsp92I	GRCGYC	2 cut(s)	1141, 1924
Hsp92II	CATG	8 cut(s)	154, 246, 838, 965, 1009, 1034, 1177, 1728
HspAI	GCGC	3 cut(s)	70, 134, 2288
Ksp22I	TGATCA	1 cut(s)	189
Kzo9I	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
LguI	GCTCTTC	2 cut(s)	1275, 1407
LmnI	GCTCC	8 cut(s)	141, 165, 282, 550, 574, 673, 946, 1726
Lsp1109I	GCAGC	8 cut(s)	67, 663, 1234, 1252, 1811, 2222, 2311, 2374
LweI	GCATC	8 cut(s)	94, 400, 697, 825, 1287, 1315, 1516, 1777
MaeI	CTAG	2 cut(s)	1244, 2419
MaeII	ACGT	2 cut(s)	1915, 1924
MaeIII	GTNAC	5 cut(s)	176, 391, 1351, 1536, 2255
MalI	GATC	9 cut(s)	62, 191, 465, 757, 1074, 1242, 1932, 2204, 2365
MboI	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	1 cut(s)	2363
MhlI	GDGCHC	4 cut(s)	1030, 1365, 1428, 2035
MlyI	GAGTC	3 cut(s)	20, 760, 2234
MmeI	TCCRAC	1 cut(s)	2391
Mph1103I	ATGCAT	2 cut(s)	415, 1280
MseI	TTAA	5 cut(s)	504, 605, 702, 1467, 1937
MslI	CAYNNNNRTG	2 cut(s)	327, 1227
MspA1I	CMGCKG	2 cut(s)	1802, 2360
MspR9I	CCNGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	2 cut(s)	803, 904
MvaI	CCWGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
MvnI	CGCG	1 cut(s)	134
MwoI	GCNNNNNNNGC	7 cut(s)	685, 1000, 1244, 1796, 2296, 2384, 2393
NcoI	CCATGG	1 cut(s)	150
NdeII	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
NlaIII	CATG	8 cut(s)	154, 246, 838, 965, 1009, 1034, 1177, 1728
NlaIV	GGNNCC	5 cut(s)	252, 576, 1644, 2320, 2365
NmuCI	GTSAC	5 cut(s)	176, 391, 1351, 1536, 2255
NsbI	TGCGCA	1 cut(s)	2289
NsiI	ATGCAT	2 cut(s)	415, 1280
NspI	RCATGY	2 cut(s)	246, 1034
OliI	CACNNNNGTG	1 cut(s)	327
PaeR7I	CTCGAG	1 cut(s)	1145
PceI	AGGCCT	1 cut(s)	440
PciI	ACATGT	2 cut(s)	242, 1030
PciSI	GCTCTTC	2 cut(s)	1275, 1407
PcsI	WCGNNNNNNNCGW	1 cut(s)	1921
PctI	GAATGC	2 cut(s)	803, 904
PfeI	GAWTC	9 cut(s)	17, 85, 658, 932, 1333, 1751, 1964, 2055, 2158
PfoI	TCCNGGA	4 cut(s)	432, 751, 1570, 1918
PkrI	GCNGC	9 cut(s)	82, 678, 1249, 1267, 1801, 2212, 2301, 2359, 2389
PleI	GAGTC	3 cut(s)	20, 760, 2233
PpsI	GAGTC	3 cut(s)	20, 760, 2233
PpuMI	RGGWCCY	1 cut(s)	1643
PscI	ACATGT	2 cut(s)	242, 1030
PshAI	GACNNNNGTC	1 cut(s)	1018
Psp5II	RGGWCCY	1 cut(s)	1643
Psp6I	CCWGG	6 cut(s)	228, 432, 751, 1570, 1918, 2277
PspFI	CCCAGC	6 cut(s)	301, 848, 990, 1437, 1790, 2390
PspGI	CCWGG	6 cut(s)	228, 432, 751, 1570, 1918, 2277
PspN4I	GGNNCC	5 cut(s)	252, 576, 1644, 2320, 2365
PspPI	GGNCC	5 cut(s)	746, 824, 1565, 1643, 1708
PspPPI	RGGWCCY	1 cut(s)	1643
PstNI	CAGNNNCTG	1 cut(s)	2360
PsuI	RGATCY	1 cut(s)	2363
PvuII	CAGCTG	1 cut(s)	1802
RsaI	GTAC	4 cut(s)	533, 1125, 1258, 2045
RsaNI	GTAC	4 cut(s)	532, 1124, 1257, 2044
RseI	CAYNNNNRTG	2 cut(s)	327, 1227
SapI	GCTCTTC	2 cut(s)	1275, 1407
SaqAI	TTAA	5 cut(s)	504, 605, 702, 1467, 1937
SatI	GCNGC	9 cut(s)	81, 677, 1248, 1266, 1800, 2211, 2300, 2358, 2388
Sau3AI	GATC	9 cut(s)	60, 189, 463, 755, 1072, 1240, 1930, 2202, 2363
Sau96I	GGNCC	5 cut(s)	746, 824, 1565, 1643, 1708
ScaI	AGTACT	1 cut(s)	533
SchI	GAGTC	3 cut(s)	20, 760, 2234
ScrFI	CCNGG	6 cut(s)	230, 434, 753, 1572, 1920, 2279
SduI	GDGCHC	4 cut(s)	1030, 1365, 1428, 2035
SfaNI	GCATC	8 cut(s)	94, 400, 697, 825, 1287, 1315, 1516, 1777
Sfr274I	CTCGAG	1 cut(s)	1145
SinI	GGWCC	4 cut(s)	746, 824, 1565, 1643
SlaI	CTCGAG	1 cut(s)	1145
SmiI	ATTTAAAT	1 cut(s)	703
SmiMI	CAYNNNNRTG	2 cut(s)	327, 1227
SmlI	CTYRAG	3 cut(s)	65, 1145, 1993
SmoI	CTYRAG	3 cut(s)	65, 1145, 1993
SseBI	AGGCCT	1 cut(s)	440
SsiI	CCGC	2 cut(s)	2269, 2358
SspI	AATATT	2 cut(s)	1980, 2119
SspMI	CTAG	2 cut(s)	1244, 2419
StuI	AGGCCT	1 cut(s)	440
StyD4I	CCNGG	6 cut(s)	228, 432, 751, 1570, 1918, 2277
StyI	CCWWGG	2 cut(s)	150, 2050
SwaI	ATTTAAAT	1 cut(s)	703
TaaI	ACNGT	8 cut(s)	446, 536, 1067, 1226, 1414, 1489, 1861, 2383
TaiI	ACGT	2 cut(s)	1918, 1927
TaqI	TCGA	6 cut(s)	707, 1146, 1701, 1749, 2133, 2228
TaqII	GACCGA	1 cut(s)	115
TatI	WGTACW	3 cut(s)	531, 1256, 2043
TauI	GCSGC	1 cut(s)	2360
TfiI	GAWTC	9 cut(s)	17, 85, 658, 932, 1333, 1751, 1964, 2055, 2158
Tru1I	TTAA	5 cut(s)	504, 605, 702, 1467, 1937
Tru9I	TTAA	5 cut(s)	504, 605, 702, 1467, 1937
TscAI	CASTG	7 cut(s)	400, 456, 559, 687, 1356, 1639, 2065
TseFI	GTSAC	5 cut(s)	176, 391, 1351, 1536, 2255
TseI	GCWGC	8 cut(s)	80, 676, 1247, 1265, 1799, 2210, 2299, 2387
Tsp45I	GTSAC	5 cut(s)	176, 391, 1351, 1536, 2255
TspGWI	ACGGA	2 cut(s)	1145, 1854
TspRI	CASTG	7 cut(s)	400, 456, 559, 687, 1356, 1639, 2065
VneI	GTGCAC	1 cut(s)	1026
VpaK11BI	GGWCC	4 cut(s)	746, 824, 1565, 1643
XapI	RAATTY	5 cut(s)	500, 1339, 1517, 1526, 1695
XceI	RCATGY	2 cut(s)	246, 1034
XcmI	CCANNNNNNNNNTGG	2 cut(s)	170, 2057
XhoI	CTCGAG	1 cut(s)	1145
XspI	CTAG	2 cut(s)	1244, 2419
ZraI	GACGTC	1 cut(s)	1925
ZrmI	AGTACT	1 cut(s)	533
Zsp2I	ATGCAT	2 cut(s)	415, 1280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.