RLG00000014543

Cell Division

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0001165
Physical Location & Seq
Forward (+)
54553242 .. 54555640
2399 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014543

Sequence Viewer

Length: 2316 bp
ATGTCGAACCAAGATGAGGGAACGAAGAAGGACTTCAGCACCGCCATTCTCAACCGCAAGAAGGCTCCAAATCGCCTCATTGTTGATGAAGCTGTGGTGGATGACAACTCCATCATCCAACTCCACCCGACGACCATGAGAAGCTCCAGCTCTTTCGTGGTAAGGATGAACAAGGTTGTGAGGAACAACCTTAGGGTTAGGCTTGGTGATGTTGTTTCCATTCACCAATGCGCTGATGTCAAGTATGGAAAGCGTGTCCACATTCTCCCTATAGATGACACAATTGAAGGGATCACTGGAAATCTGTTTGATGCCTACTTGAAGCCATATTTCCAAGAGACCTACCGCCCGGTTAGGAAAGGTGATCTTTTCCTAGTGAGAGGAGGAATGAGGAGTGTAGAGTTTAAGGTTATTGAGACTGACCCTCCTGAGTACTGTGTGGTTGCTCCAGACACCGAAATCTTCTGTGAGGGAGAACCGGTTAGAAGGGAGGATGAGGAAAGATTAGATGAAGTAGGGTATGATGATGTTGGTGGTGTTAGGAAACAGATGGCTCAGATTCGCGAATTGGTTGAGCTGCCTCTGAGGCATCCTCAGCTGTTTAAATCAATCGGTGTCAAACCACCAAAGGGTATTCTTCTCTATGGTCCTCCTGGAACCGGCAAGACTTTAATTGCAAGAGCTGTTGCTAATGAAACCGGGGCATTCTTTTTCTGCATCAATGGACCAGAAATCATGTCCAAGATGGCTGGAGAGAGTGAGAGCAACCTCAGGAAAGCTTTTGAGGAAGCAGAGAAGAATGCGCCATCAATCATATTTATTGATGAGATTGATTCCATTGCTCCCAAGAGAGAGAAGACTCATGGAGAAGTTGAGAGGAGGATTGTTTCCCAGCTCTTGACTCTTATGGATGGACTAAAGTCCCGAGCACATGTCATTGTTATGGGGGCTACTAATCGTCCAAACAGTATTGACCCGGCTCTTAGGAGGTTTGGAAGATTTGATAGGGAAATAGATATTGGTGTTCCAGATGAAGTTGGGCGTCTTGAGGTCCTCCGCATTCATAGCAAGAACATGAAGCTTGCTGAAGATGTCGATTTAGAAAGGGTTGCCAAGGATACTCATGGGTATGTTGGTGCTGATCTAGCTGCTTTATCTACTGAGGCTGCACTTCAATGCATCCGAGAGAAGATGGATGTGATTGACTTGGAAGATGAGACAATAGATGCCGAGATACTCAACTCAATGGCAGTAACAAACGAACATTTCCAGACTGCTCTTGGAACAAGCAACCCTTCTGCTCTTCGTGAAACTGTTGTTGAAGTTCCCAATGTTACTTGGGATGCTGTTGGAGGCCTTGAAAATGTTAAGAGAGAACTTCAAGAGACTGTTCAATATCCTGTTGAGCATCCGGAGAAATTTGAGAAATTCGGTATGTCACCCTCAAAGGGAGTTCTTTTCTATGGTCCTCCTGGATGCGGTAAAACTCTTCTGGCCAAGGCTATAGCTAATGAGTGTCAGGCTAACTTCATCAGTATCAAGGGACCTGAGTTGCTCACCATGTGGTTTGGAGAGAGTGAGGCCAATGTAAGAGAAATTTTTGACAAGGCTCGTGCATCTGCGCCATGTGTCCTCTTTTTTGATGAGCTCGATTCTATTGCTACTAAAAGAGGTAGTAATGTAGGTGATTCTGGAGGTGCTGATAGGGTTTTGAACCAACTCCTTACTGAAATGGATGGAGTGTCTGCCAAGAAAACTGTTTTCATTATTGGGGCCACCAACAGACCTGACATTATAGACCCAGCACTTCTTCGTCCAGGACGTCTGGATCAATTGCTTTACATTCCTCTCCCTGATGAAGAATCCCGCTATCAAATATTCAAGTCTTGCTTGAGGAAATCTCCTGTTTCCAAGTATGTGGACCTCAAAGCTCTTGCCAAGCACACAGAAGGTTTCAGTGGTGCTGATATCACTGAAATATGCCAACGTGCTTGCAAATATGCCATCAGAGACAACATTGAGAAAGATATTGAGAGGGAGAGGAGGAGAAGTGAGAATCCTGATGTCATGGAGGAGGATGAAGATGAAGTATCAGAGATCACCGCAGTTCATTTTGAGGAATCAATGAAGTATGCTCGTAGGAGTGTTAGTGATGCTGATATCCTCAAGTACCAGGCATTTGCGACTACATTGCACCAGGCGAGAGCGTTTGGAGCAGATGAGATCAGGTTCCCCAGTGACTCGGGCGCTGCTGTTGGTTCTGATCCTTTTGCAACTACTACTGCTGGTGAAGCTGATGAAGACCTTTATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 ko05134 map04141 map05134
Pfam Domains
Protein Families
AAA CDC48_2 CDC48_N

Protein Analysis

772

Amino Acids

85.86

Weight (kDa)

5.09

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC48_2 PF02933 98 - 162 1.2e-11 Cell division protein 48 (CDC48), domain 2
RuvB_N PF05496 211 - 286 6e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 212 - 341 1.4e-48 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 364 - 405 3.9e-14 AAA+ lid domain
AAA PF00004 485 - 617 5.4e-47 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 640 - 678 2.3e-13 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1825
AccII CGCG 1 cut(s) 564
AccIII TCCGGA 1 cut(s) 1411
AciI CCGC 7 cut(s) 42, 55, 346, 1057, 1479, 1867, 2103
AclWI GGATC 3 cut(s) 299, 1836, 2258
AcoI YGGCCR 1 cut(s) 1494
AcsI RAATTY 3 cut(s) 1418, 1427, 1596
AcuI CTGAAG 2 cut(s) 19, 1107
AcyI GRCGYC 2 cut(s) 1042, 1822
AdeI CACNNNGTG 1 cut(s) 1563
AfaI GTAC 2 cut(s) 434, 2171
AfiI CCNNNNNNNGG 6 cut(s) 16, 61, 629, 659, 1448, 1478
AflIII ACRYGT 1 cut(s) 931
AgeI ACCGGT 1 cut(s) 478
AgsI TTSAA 9 cut(s) 287, 322, 1175, 1322, 1361, 1382, 1394, 1714, 1882
AjnI CCWGG 5 cut(s) 652, 1471, 1816, 2172, 2196
AjuI GAANNNNNNNTTGG 2 cut(s) 1002, 1034
Alw21I GWGCWC 2 cut(s) 931, 1650
Alw26I GTCTC 5 cut(s) 332, 410, 1211, 1379, 2004
AlwI GGATC 3 cut(s) 299, 1836, 2258
Ama87I CYCGRG 2 cut(s) 924, 2242
Aor13HI TCCGGA 1 cut(s) 1411
AoxI GGCC 4 cut(s) 1354, 1494, 1581, 1773
ApeKI GCWGC 4 cut(s) 577, 1148, 1166, 2249
ApoI RAATTY 3 cut(s) 1418, 1427, 1596
AsiGI ACCGGT 1 cut(s) 478
Asp700I GAANNNNTTC 1 cut(s) 32
AspLEI GCGC 4 cut(s) 233, 805, 1624, 2249
AspS9I GGNCC 7 cut(s) 647, 725, 1051, 1466, 1544, 1773, 1921
AsuC2I CCSGG 3 cut(s) 350, 700, 977
AsuHPI GGTGA 8 cut(s) 215, 218, 374, 1431, 1549, 1697, 2092, 2300
AvaI CYCGRG 2 cut(s) 924, 2242
AvaII GGWCC 6 cut(s) 647, 725, 1051, 1466, 1544, 1921
AxyI CCTNAGG 2 cut(s) 191, 770
BalI TGGCCA 1 cut(s) 1496
BanII GRGCYC 1 cut(s) 1650
BauI CACGAG 1 cut(s) 1611
BbsI GAAGAC 2 cut(s) 863, 2307
Bbv12I GWGCWC 2 cut(s) 931, 1650
BbvCI CCTCAGC 1 cut(s) 594
BbvI GCAGC 4 cut(s) 564, 1135, 1153, 2236
BccI CCATC 8 cut(s) 119, 544, 739, 814, 905, 1186, 1730, 2012
BcgI CGANNNNNNTGC 4 cut(s) 1640, 1674, 2173, 2207
BciT130I CCWGG 5 cut(s) 654, 1473, 1818, 2174, 2198
BciVI GTATCC 1 cut(s) 1111
BcnI CCSGG 3 cut(s) 350, 700, 977
BcoDI GTCTC 5 cut(s) 332, 410, 1211, 1379, 2004
BfaI CTAG 2 cut(s) 374, 1145
BfmI CTRYAG 2 cut(s) 270, 1503
BfoI RGCGCY 1 cut(s) 2250
BfuI GTATCC 1 cut(s) 1111
BglI GCCNNNNNGGC 1 cut(s) 586
BisI GCNGC 4 cut(s) 578, 1149, 1167, 2250
BlsI GCNGC 4 cut(s) 579, 1150, 1168, 2251
BmcAI AGTACT 1 cut(s) 434
Bme1390I CCNGG 8 cut(s) 350, 654, 700, 977, 1473, 1818, 2174, 2198
Bme18I GGWCC 6 cut(s) 647, 725, 1051, 1466, 1544, 1921
BmeT110I CYCGRG 2 cut(s) 924, 2242
BmgT120I GGNCC 7 cut(s) 647, 725, 1051, 1466, 1544, 1773, 1921
BmiI GGNNCC 5 cut(s) 66, 658, 1545, 1774, 2231
BmrFI CCNGG 8 cut(s) 350, 654, 700, 977, 1473, 1818, 2174, 2198
BmrI ACTGGG 1 cut(s) 2229
BmuI ACTGGG 1 cut(s) 2229
BoxI GACNNNNGTC 1 cut(s) 919
BpiI GAAGAC 2 cut(s) 863, 2307
BplI GAGNNNNNCTC 4 cut(s) 577, 609, 1885, 1917
BpmI CTGGAG 4 cut(s) 130, 432, 771, 1713
Bpu10I CCTNAGC 1 cut(s) 594
BpuEI CTTGAG 3 cut(s) 1067, 1912, 2150
BpuMI CCSGG 3 cut(s) 350, 700, 977
BsaHI GRCGYC 2 cut(s) 1042, 1822
BsaI GGTCTC 1 cut(s) 332
BsaJI CCNNGG 3 cut(s) 699, 1113, 1497
BsaWI WCCGGW 2 cut(s) 478, 1411
BsaXI ACNNNNNCTCC 8 cut(s) 409, 439, 465, 495, 2035, 2065, 2134, 2164
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 61, 629, 659, 1448, 1478
Bse118I RCCGGY 2 cut(s) 478, 659
Bse1I ACTGG 2 cut(s) 301, 2235
Bse21I CCTNAGG 2 cut(s) 191, 770
Bse3DI GCAATG 2 cut(s) 837, 2189
BseAI TCCGGA 1 cut(s) 1411
BseBI CCWGG 5 cut(s) 654, 1473, 1818, 2174, 2198
BseDI CCNNGG 3 cut(s) 699, 1113, 1497
BseLI CCNNNNNNNGG 6 cut(s) 16, 61, 629, 659, 1448, 1478
BseMI GCAATG 2 cut(s) 837, 2189
BseMII CTCAG 7 cut(s) 420, 569, 575, 608, 784, 1152, 1539
BseNI ACTGG 2 cut(s) 301, 2235
BseRI GAGGAG 6 cut(s) 396, 406, 892, 2056, 2059, 2087
BseXI GCAGC 4 cut(s) 564, 1135, 1153, 2236
BseYI CCCAGC 2 cut(s) 891, 1801
BsgI GTGCAG 1 cut(s) 1152
Bsh1236I CGCG 1 cut(s) 564
BshFI GGCC 4 cut(s) 1356, 1496, 1583, 1775
BshTI ACCGGT 1 cut(s) 478
BsiHKAI GWGCWC 2 cut(s) 931, 1650
BsiHKCI CYCGRG 2 cut(s) 924, 2242
BsiSI CCGG 6 cut(s) 350, 479, 660, 699, 977, 1412
BslFI GGGAC 2 cut(s) 907, 1557
BslI CCNNNNNNNGG 6 cut(s) 16, 61, 629, 659, 1448, 1478
BsmAI GTCTC 5 cut(s) 332, 410, 1211, 1379, 2004
BsmFI GGGAC 2 cut(s) 907, 1557
BsmI GAATGC 3 cut(s) 704, 805, 1059
BsnI GGCC 4 cut(s) 1356, 1496, 1583, 1775
Bso31I GGTCTC 1 cut(s) 332
BsoBI CYCGRG 2 cut(s) 924, 2242
Bsp1286I GDGCHC 2 cut(s) 931, 1650
Bsp13I TCCGGA 1 cut(s) 1411
Bsp143I GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
Bsp68I TCGCGA 1 cut(s) 564
BspACI CCGC 7 cut(s) 42, 55, 346, 1057, 1479, 1867, 2103
BspANI GGCC 4 cut(s) 1356, 1496, 1583, 1775
BspCNI CTCAG 7 cut(s) 421, 568, 576, 607, 783, 1153, 1540
BspEI TCCGGA 1 cut(s) 1411
BspFNI CGCG 1 cut(s) 564
BspLI GGNNCC 5 cut(s) 66, 658, 1545, 1774, 2231
BspPI GGATC 3 cut(s) 299, 1836, 2258
BspQI GCTCTTC 1 cut(s) 1308
BspTNI GGTCTC 1 cut(s) 332
BsrDI GCAATG 2 cut(s) 837, 2189
BsrFI RCCGGY 2 cut(s) 478, 659
BsrI ACTGG 2 cut(s) 301, 2235
BssAI RCCGGY 2 cut(s) 478, 659
BssECI CCNNGG 3 cut(s) 699, 1113, 1497
BssMI GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
BssNI GRCGYC 2 cut(s) 1042, 1822
BssSI CACGAG 1 cut(s) 1611
BssT1I CCWWGG 2 cut(s) 1113, 1497
Bst2BI CACGAG 1 cut(s) 1611
Bst2UI CCWGG 5 cut(s) 654, 1473, 1818, 2174, 2198
Bst4CI ACNGT 5 cut(s) 437, 968, 1315, 1390, 1759
Bst6I CTCTTC 2 cut(s) 1308, 1494
BstACI GRCGYC 2 cut(s) 1042, 1822
BstC8I GCNNGC 2 cut(s) 1083, 1993
BstDEI CTNAG 9 cut(s) 191, 429, 555, 584, 594, 770, 983, 1161, 1548
BstFNI CGCG 1 cut(s) 564
BstH2I RGCGCY 1 cut(s) 2250
BstHHI GCGC 4 cut(s) 233, 805, 1624, 2249
BstKTI GATC 7 cut(s) 294, 367, 1144, 1831, 2100, 2226, 2266
BstMAI GTCTC 5 cut(s) 332, 410, 1211, 1379, 2004
BstMBI GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
BstMWI GCNNNNNNNGC 6 cut(s) 586, 595, 1065, 1145, 2213, 2291
BstNI CCWGG 5 cut(s) 654, 1473, 1818, 2174, 2198
BstNSI RCATGY 1 cut(s) 935
BstPAI GACNNNNGTC 1 cut(s) 919
BstSCI CCNGG 8 cut(s) 348, 652, 698, 975, 1471, 1816, 2172, 2196
BstSFI CTRYAG 2 cut(s) 270, 1503
BstUI CGCG 1 cut(s) 564
BstV1I GCAGC 4 cut(s) 564, 1135, 1153, 2236
BstV2I GAAGAC 2 cut(s) 863, 2307
BstXI CCANNNNNNTGG 1 cut(s) 1918
Bsu36I CCTNAGG 2 cut(s) 191, 770
BsuI GTATCC 1 cut(s) 1111
BsuRI GGCC 4 cut(s) 1356, 1496, 1583, 1775
BtsIMutI CAGTG 4 cut(s) 294, 1963, 1971, 2242
BtuMI TCGCGA 1 cut(s) 564
Cac8I GCNNGC 2 cut(s) 1083, 1993
CfoI GCGC 4 cut(s) 233, 805, 1624, 2249
Cfr10I RCCGGY 2 cut(s) 478, 659
Cfr13I GGNCC 7 cut(s) 647, 725, 1051, 1466, 1544, 1773, 1921
CseI GACGC 1 cut(s) 1031
Csp6I GTAC 2 cut(s) 433, 2170
CspAI ACCGGT 1 cut(s) 478
CviAII CATG 9 cut(s) 136, 736, 863, 932, 1075, 1124, 1561, 1626, 2068
CviQI GTAC 2 cut(s) 433, 2170
DdeI CTNAG 9 cut(s) 191, 429, 555, 584, 594, 770, 983, 1161, 1548
DpnI GATC 7 cut(s) 293, 366, 1143, 1830, 2099, 2225, 2265
DpnII GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
DraI TTTAAA 1 cut(s) 604
DraIII CACNNNGTG 1 cut(s) 1563
EaeI YGGCCR 1 cut(s) 1494
Eam1104I CTCTTC 2 cut(s) 1308, 1494
EarI CTCTTC 2 cut(s) 1308, 1494
Ecl136II GAGCTC 1 cut(s) 1648
Eco130I CCWWGG 2 cut(s) 1113, 1497
Eco147I AGGCCT 1 cut(s) 1356
Eco24I GRGCYC 1 cut(s) 1650
Eco31I GGTCTC 1 cut(s) 332
Eco32I GATATC 2 cut(s) 1969, 2161
Eco47I GGWCC 6 cut(s) 647, 725, 1051, 1466, 1544, 1921
Eco53kI GAGCTC 1 cut(s) 1648
Eco57I CTGAAG 2 cut(s) 19, 1107
Eco81I CCTNAGG 2 cut(s) 191, 770
Eco88I CYCGRG 2 cut(s) 924, 2242
EcoICRI GAGCTC 1 cut(s) 1648
EcoO109I RGGNCCY 2 cut(s) 1051, 1544
EcoRII CCWGG 5 cut(s) 652, 1471, 1816, 2172, 2196
EcoRV GATATC 2 cut(s) 1969, 2161
EcoT14I CCWWGG 2 cut(s) 1113, 1497
EcoT22I ATGCAT 1 cut(s) 1181
EcoT38I GRGCYC 1 cut(s) 1650
ErhI CCWWGG 2 cut(s) 1113, 1497
FaeI CATG 9 cut(s) 139, 739, 866, 935, 1078, 1127, 1564, 1629, 2071
FalI AAGNNNNNCTT 8 cut(s) 17, 49, 351, 383, 1279, 1311, 1874, 1906
FaqI GGGAC 2 cut(s) 907, 1557
FatI CATG 9 cut(s) 135, 735, 862, 931, 1074, 1123, 1560, 1625, 2067
FauI CCCGC 1 cut(s) 1874
Fnu4HI GCNGC 4 cut(s) 578, 1149, 1167, 2250
FriOI GRGCYC 1 cut(s) 1650
Fsp4HI GCNGC 4 cut(s) 578, 1149, 1167, 2250
FspBI CTAG 2 cut(s) 374, 1145
GlaI GCGC 4 cut(s) 232, 804, 1623, 2248
GluI GCNGC 4 cut(s) 578, 1149, 1167, 2250
GsaI CCCAGC 2 cut(s) 895, 1805
GsuI CTGGAG 4 cut(s) 130, 432, 771, 1713
HaeII RGCGCY 1 cut(s) 2250
HaeIII GGCC 4 cut(s) 1356, 1496, 1583, 1775
HapII CCGG 6 cut(s) 350, 479, 660, 699, 977, 1412
HgaI GACGC 1 cut(s) 1031
HhaI GCGC 4 cut(s) 233, 805, 1624, 2249
Hin1I GRCGYC 2 cut(s) 1042, 1822
Hin1II CATG 9 cut(s) 139, 739, 866, 935, 1078, 1127, 1564, 1629, 2071
Hin6I GCGC 4 cut(s) 231, 803, 1622, 2247
HinP1I GCGC 4 cut(s) 231, 803, 1622, 2247
HindIII AAGCTT 2 cut(s) 777, 1079
HpaII CCGG 6 cut(s) 350, 479, 660, 699, 977, 1412
HphI GGTGA 8 cut(s) 215, 218, 374, 1431, 1549, 1697, 2092, 2300
Hpy166II GTNNAC 2 cut(s) 259, 1921
Hpy188I TCNGA 6 cut(s) 558, 585, 1184, 2009, 2095, 2263
Hpy8I GTNNAC 2 cut(s) 259, 1921
Hpy99I CGWCG 1 cut(s) 133
HpyAV CCTTC 6 cut(s) 22, 55, 281, 480, 1305, 1943
HpyCH4III ACNGT 5 cut(s) 437, 968, 1315, 1390, 1759
HpyCH4IV ACGT 2 cut(s) 1822, 1987
HpyCH4V TGCA 8 cut(s) 677, 717, 1169, 1179, 1616, 1995, 2194, 2273
HpyF10VI GCNNNNNNNGC 6 cut(s) 586, 595, 1065, 1145, 2213, 2291
HpyF3I CTNAG 9 cut(s) 191, 429, 555, 584, 594, 770, 983, 1161, 1548
HpySE526I ACGT 2 cut(s) 1822, 1987
Hsp92I GRCGYC 2 cut(s) 1042, 1822
Hsp92II CATG 9 cut(s) 139, 739, 866, 935, 1078, 1127, 1564, 1629, 2071
HspAI GCGC 4 cut(s) 231, 803, 1622, 2247
Kpn2I TCCGGA 1 cut(s) 1411
Kzo9I GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
LguI GCTCTTC 1 cut(s) 1308
LmnI GCTCC 5 cut(s) 70, 149, 451, 847, 2213
Lsp1109I GCAGC 4 cut(s) 564, 1135, 1153, 2236
MaeI CTAG 2 cut(s) 374, 1145
MaeII ACGT 2 cut(s) 1822, 1987
MaeIII GTNAC 4 cut(s) 1252, 1333, 1437, 2237
MalI GATC 7 cut(s) 293, 366, 1143, 1830, 2099, 2225, 2265
MboI GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
MfeI CAATTG 2 cut(s) 282, 1832
MhlI GDGCHC 2 cut(s) 931, 1650
MlsI TGGCCA 1 cut(s) 1496
MluCI AATT 7 cut(s) 282, 566, 672, 1418, 1427, 1596, 1832
MluNI TGGCCA 1 cut(s) 1496
MlyI GAGTC 3 cut(s) 853, 895, 2234
MmeI TCCRAC 2 cut(s) 142, 1330
Mox20I TGGCCA 1 cut(s) 1496
Mph1103I ATGCAT 1 cut(s) 1181
MroI TCCGGA 1 cut(s) 1411
MroXI GAANNNNTTC 1 cut(s) 32
MscI TGGCCA 1 cut(s) 1496
MseI TTAA 4 cut(s) 405, 603, 671, 1368
MslI CAYNNNNRTG 3 cut(s) 941, 1128, 1174
Msp20I TGGCCA 1 cut(s) 1496
MspA1I CMGCKG 1 cut(s) 598
MspI CCGG 6 cut(s) 350, 479, 660, 699, 977, 1412
MspR9I CCNGG 8 cut(s) 350, 654, 700, 977, 1473, 1818, 2174, 2198
MunI CAATTG 2 cut(s) 282, 1832
Mva1269I GAATGC 3 cut(s) 704, 805, 1059
MvaI CCWGG 5 cut(s) 654, 1473, 1818, 2174, 2198
MvnI CGCG 1 cut(s) 564
MwoI GCNNNNNNNGC 6 cut(s) 586, 595, 1065, 1145, 2213, 2291
NciI CCSGG 3 cut(s) 350, 700, 977
NdeII GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
NlaIII CATG 9 cut(s) 139, 739, 866, 935, 1078, 1127, 1564, 1629, 2071
NlaIV GGNNCC 5 cut(s) 66, 658, 1545, 1774, 2231
NmeAIII GCCGAG 1 cut(s) 1255
NmuCI GTSAC 2 cut(s) 1437, 2237
NruI TCGCGA 1 cut(s) 564
NsiI ATGCAT 1 cut(s) 1181
NspI RCATGY 1 cut(s) 935
PceI AGGCCT 1 cut(s) 1356
PciI ACATGT 1 cut(s) 931
PciSI GCTCTTC 1 cut(s) 1308
PcsI WCGNNNNNNNCGW 1 cut(s) 1819
PctI GAATGC 3 cut(s) 704, 805, 1059
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 7 cut(s) 559, 833, 1652, 1688, 1862, 2056, 2120
PfoI TCCNGGA 3 cut(s) 652, 1471, 1816
PinAI ACCGGT 1 cut(s) 478
PkrI GCNGC 4 cut(s) 579, 1150, 1168, 2251
PleI GAGTC 3 cut(s) 853, 895, 2234
PpsI GAGTC 3 cut(s) 853, 895, 2234
PpuMI RGGWCCY 2 cut(s) 1051, 1544
PscI ACATGT 1 cut(s) 931
PshAI GACNNNNGTC 1 cut(s) 919
Psp124BI GAGCTC 1 cut(s) 1650
Psp5II RGGWCCY 2 cut(s) 1051, 1544
Psp6I CCWGG 5 cut(s) 652, 1471, 1816, 2172, 2196
PspFI CCCAGC 2 cut(s) 891, 1801
PspGI CCWGG 5 cut(s) 652, 1471, 1816, 2172, 2196
PspN4I GGNNCC 5 cut(s) 66, 658, 1545, 1774, 2231
PspPI GGNCC 7 cut(s) 647, 725, 1051, 1466, 1544, 1773, 1921
PspPPI RGGWCCY 2 cut(s) 1051, 1544
PvuII CAGCTG 1 cut(s) 598
RruI TCGCGA 1 cut(s) 564
RsaI GTAC 2 cut(s) 434, 2171
RsaNI GTAC 2 cut(s) 433, 2170
RseI CAYNNNNRTG 3 cut(s) 941, 1128, 1174
SacI GAGCTC 1 cut(s) 1650
SapI GCTCTTC 1 cut(s) 1308
SaqAI TTAA 4 cut(s) 405, 603, 671, 1368
SatI GCNGC 4 cut(s) 578, 1149, 1167, 2250
Sau3AI GATC 7 cut(s) 291, 364, 1141, 1828, 2097, 2223, 2263
Sau96I GGNCC 7 cut(s) 647, 725, 1051, 1466, 1544, 1773, 1921
ScaI AGTACT 1 cut(s) 434
SchI GAGTC 3 cut(s) 853, 895, 2234
ScrFI CCNGG 8 cut(s) 350, 654, 700, 977, 1473, 1818, 2174, 2198
SduI GDGCHC 2 cut(s) 931, 1650
SfcI CTRYAG 2 cut(s) 270, 1503
SinI GGWCC 6 cut(s) 647, 725, 1051, 1466, 1544, 1921
SmiMI CAYNNNNRTG 3 cut(s) 941, 1128, 1174
SmlI CTYRAG 3 cut(s) 1046, 1891, 2165
SmoI CTYRAG 3 cut(s) 1046, 1891, 2165
Sse9I AATT 7 cut(s) 282, 566, 672, 1418, 1427, 1596, 1832
SseBI AGGCCT 1 cut(s) 1356
SsiI CCGC 7 cut(s) 42, 55, 346, 1057, 1479, 1867, 2103
SspI AATATT 1 cut(s) 1878
SspMI CTAG 2 cut(s) 374, 1145
SstI GAGCTC 1 cut(s) 1650
StuI AGGCCT 1 cut(s) 1356
StyD4I CCNGG 8 cut(s) 348, 652, 698, 975, 1471, 1816, 2172, 2196
StyI CCWWGG 2 cut(s) 1113, 1497
TaaI ACNGT 5 cut(s) 437, 968, 1315, 1390, 1759
TaiI ACGT 2 cut(s) 1825, 1990
TaqI TCGA 3 cut(s) 5, 1095, 1650
TasI AATT 7 cut(s) 282, 566, 672, 1418, 1427, 1596, 1832
TatI WGTACW 1 cut(s) 432
TfiI GAWTC 7 cut(s) 559, 833, 1652, 1688, 1862, 2056, 2120
Tru1I TTAA 4 cut(s) 405, 603, 671, 1368
Tru9I TTAA 4 cut(s) 405, 603, 671, 1368
TscAI CASTG 4 cut(s) 301, 1963, 1978, 2242
TseFI GTSAC 2 cut(s) 1437, 2237
TseI GCWGC 4 cut(s) 577, 1148, 1166, 2249
Tsp45I GTSAC 2 cut(s) 1437, 2237
TspRI CASTG 4 cut(s) 301, 1963, 1978, 2242
VpaK11BI GGWCC 6 cut(s) 647, 725, 1051, 1466, 1544, 1921
XapI RAATTY 3 cut(s) 1418, 1427, 1596
XceI RCATGY 1 cut(s) 935
XcmI CCANNNNNNNNNTGG 2 cut(s) 154, 1277
XmnI GAANNNNTTC 1 cut(s) 32
XspI CTAG 2 cut(s) 374, 1145
ZraI GACGTC 1 cut(s) 1823
ZrmI AGTACT 1 cut(s) 434
Zsp2I ATGCAT 1 cut(s) 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.