Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001165

Physical Location & Seq

Genomic Coordinates Reverse (-)

7670885 .. 7676626

Gene Structure 5742 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G107800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGGCTCACCCAGCCGAATCGTCCGACTCGAAGAAGAAGGACTTCTCGACCGCGATTTTGGAGCGGAAGAAGTCGCCGAACCGTCTCGTCGTGGATGAGGCTATAAACGATGACAACTCTGTCGTTTCGATGCATCCAGAGACCATGGAAAAGCTCCAGCTTTTCCGTGGCGACACTATCCTCATCAAGGGGAAGAAACGGAAGGACACAATCTGCATTGCACTTGCTGATGACACCTGTGAAGAGCCAAGAATCAGGATGAACAAGGTTGTCAGATCGAATTTGAGGGTTCGACTTGGAGATGTTGTGTCTGTACACCAATGCCCTGATGTGAAGTATGGGAAACGTGTTCACATTCTGCCTATTGATGACTCCATAGAAGGAGTTACTGGAAATCTCTTTGATGCCTTTTTGAAACCTTACTTCTTGGAAGCTTATCGCCCTGTGAGGAAAGGAGATCTGTTCCTTGTCAGAGGAGGAATGAGAAGTGTAGAGTTCAAGGTTATTGAAACAGACCCAGGAGAATATTGTGTGGTTGCCCCAGACACTGAGATCTTCTGTGAGGGGGAACCAGTGAAAAGGGAGGATGAGGAAAGGTTGGATGAAGTTGGTTATGATGATGTGGGTGGTGTTCGGAAGCAGATGGCTCAAATCCGTGAGTTAGTTGAGCTGCCACTGAGGCATCCTCAACTGTTTAAATCTATTGGTGTGAAACCACCAAAAGGAATTCTACTTTATGGACCCCCGGGTTCAGGAAAGACATTAATAGCCAGAGCTGTTGCCAATGAAACTGGTGCTTTTTTCTTTTGCATTAATGGGCCAGAGATTATGTCTAAATTGGCTGGAGAGAGTGAGAGCAATCTCAGAAAGGCATTTGAAGAAGCGGAGAAGAATGCCCCATCAATCATCTTTATTGATGAGCTTGATTCAATTGCTCCTAAGAGGGAGAAGACACACGGTGAGGTCGAAAGGCGGATTGTTTCTCAACTTTTGACTCTGATGGACGGATTGAAATCTAGAGCTCACGTTATTGTTATTGGTGCTACAAATCGTCCAAACAGTATTGACTCGGCTTTGAGAAGGTTTGGTAGGTTTGATAGGGAGATAGACATTGGTGTTCCTGATGAAGTTGGGCGTCTTGAAGTTCTTCGCATTCACACCAAGAACATGAAACTCTCTGATGATGTTGATTTAGAGAGGATTTCCAAAGATACACATGGGTATGTTGGTGCTGACCTTGCTGCTCTCTGCACTGAAGCTGCACTCCAATGCATTAGGGAGAAGATGGATGTGATTGACTTGGAAGATGAAACCATTGATGCAGAGATACTCAACTCAATGGCTGTAACAAATGAGCACTTCCAGACTGCTCTAGGAACAAGCAATCCATCTGCTTTGCGCGAAACGGTTGTTGAAGTTCCCAATGTTAGTTGGGAGGATATTGGAGGCCTTGAAAATGTCAAGCGGGAGCTACAAGAGACTGTTCAATATCCTGTTGAGCACCCAGAGAAGTTTGAGAAATTTGGCATGTCACCTTCTAAAGGGGTCCTTTTCTATGGACCCCCAGGATGTGGGAAAACTCTTTTGGCCAAGGCAATCGCAAATGAATGTCAAGCTAACTTCATCAGTATCAAAGGCCCTGAACTACTCACCATGTGGTTTGGTGAGAGTGAAGCCAATGTTCGAGAAATCTTTGACAAGGCTCGTGCATCTGCACCATGTGTCCTTTTCTTTGATGAGCTTGATTCCATTGCTACACAGAGAGGAAGCAGTTCTGGGGATGCAGGGGGTGCTGCTGATCGGGTTCTTAACCAACTCCTGACTGAAATGGATGGCATGACAGCAAAAAAGACGGTTTTCATTATTGGGGCCACAAACCGACCTGACATCATTGACCCAGCACTTCTCCGACCTGGCCGTCTTGATCAATTGATTTATATTCCTCTTCCTGATGAAGAATCGCGTTTCCAAATCTTTAAATCCTGCTTGAGAAAATCACCTGTCTCAAAAGATGTTGATTTGAGAGCATTGGCCAGGTATACACAGGGCTTCAGTGGGGCTGATATCACAGAGATCTGCCAGCGGTCCTGCAAGTATGCCATAAGAGAAAATATTGAGAAGGATATAGAGCGGGAGAGGAGGAGAGGGGAGAATCCGGATTCTATGGATGAGGACATCGATGACGAAGTGGCAGAGATTAAAGCTGCTCATTTTGAGGAGTCAATGAAATATGCTCGTAGGAGTGTCAGCGATGCAGATATTCGCAAATATCAGACCTTTGCTCAGACCTTGCAGCAGTCCAGGGGTTTCGGAACTGAGTTTAGGTTTGCTGATAACCAAACTGGGGCAACTGGTGCTGATCCATTCGCAACTTCTGCTGGTGGGGCTGACGAAGATGATTTGTATAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010038 GO:0010604 GO:0012505 GO:0016020 GO:0019222 GO:0031974 GO:0031981 GO:0042176 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046686 GO:0048518 GO:0050789 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko04141 ko05134 map04141 map05134

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

804

Amino Acids

89.44

Weight (kDa)

5.11

Isoelectric Point (pI)

42.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53230
fragaria_vesca	FvH4_2g06940 FvH4_2g06950 FvH4_2g07260 FvH4_4g17680 FvH4_6g16220 FvH4_6g16220
malus_domestica	MD03G1125700.v1.1 MD04G1094400.v1.1 MD11G1142500.v1.1 MD12G1114300.v1.1 MD17G1225300.v1.1 MD17G1225400.v1.1 MD17G1225600.v1.1 MD17G1228800.v1.1
prunus_persica	Prupe.4G237600_v2.0.a1 Prupe.6G107800_v2.0.a1 Prupe.6G233700_v2.0.a1 Prupe.6G233700_v2.0.a1
pyrus_communis	pycom04g08940 pycom04g08950 pycom09g14580 pycom11g11820 pycom12g11360
rosa_chinensis	RchiOBHm_Chr3g0470061 RchiOBHm_Chr4g0421621 RchiOBHm_Chr6g0259281 RchiOBHm_Chr6g0259871
rosa_laevigata	RLG00000007663 RLG00000014503 RLG00000014543 RLG00000024300
rosa_multiflora	Rmu_co8522155.1_g000003 Rmu_sc0005600.1_g000001 Rmu_sc0009049.1_g000005 Rmu_sc0011974.1_g000005 Rmu_sc0033604.1_g000001 Rmu_sc0033605.1_g000001 Rmu_ssc0000050.1_g000089
rosa_roxburghii	Rroxscaffold_5G00363870 Rroxscaffold_6G00411220
rosa_rugosa	Rorug03G0106600 Rorug04G0173900 Rorug05G0586800 Rorug05G0590900
rosa_samantha	Rh3AG155800 Rh4CG248200 Rh6AG103300 Rh6AG103400 Rh6AG107600 Rh6BG095700 Rh6CG092600 Rh6CG096400
rosa_wichuraiana	Rw3G014670 Rw4G020040 Rw6G008920 Rw6G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	119, 1917
AccB7I	CCANNNNNTGG	1 cut(s)	1571
AccBSI	CCGCTC	2 cut(s)	64, 2131
AccI	GTMKAC	1 cut(s)	2039
AccII	CGCG	3 cut(s)	53, 1401, 1963
AccIII	TCCGGA	1 cut(s)	2155
AciI	CCGC	7 cut(s)	51, 64, 884, 973, 1465, 2083, 2131
AclWI	GGATC	1 cut(s)	2354
AcoI	YGGCCR	3 cut(s)	1587, 1915, 2031
AcsI	RAATTY	3 cut(s)	280, 726, 1520
AcuI	CTGAAG	2 cut(s)	1275, 2035
AcyI	GRCGYC	1 cut(s)	1135
AdeI	CACNNNGTG	3 cut(s)	959, 1656, 1721
AfaI	GTAC	1 cut(s)	315
AfiI	CCNNNNNNNGG	6 cut(s)	187, 722, 752, 1541, 1571, 2344
AflIII	ACRYGT	1 cut(s)	346
AjnI	CCWGG	5 cut(s)	517, 1564, 1912, 2033, 2300
AjuI	GAANNNNNNNTTGG	2 cut(s)	1568, 1600
AloI	GAACNNNNNNTCC	2 cut(s)	1369, 1401
Alw21I	GWGCWC	3 cut(s)	1024, 1359, 1503
Alw26I	GTCTC	4 cut(s)	89, 134, 1472, 2008
AlwI	GGATC	1 cut(s)	2354
AlwNI	CAGNNNCTG	1 cut(s)	548
Ama87I	CYCGRG	1 cut(s)	745
Aor13HI	TCCGGA	1 cut(s)	2155
AoxI	GGCC	7 cut(s)	818, 1447, 1587, 1636, 1869, 1915, 2031
ApeKI	GCWGC	6 cut(s)	670, 1241, 1259, 1793, 2204, 2293
ApoI	RAATTY	3 cut(s)	280, 726, 1520
ArsI	GACNNNNNNTTYG	2 cut(s)	40, 72
AseI	ATTAAT	2 cut(s)	764, 813
Asp700I	GAANNNNTTC	3 cut(s)	41, 1146, 1771
AspLEI	GCGC	1 cut(s)	1401
AspS9I	GGNCC	7 cut(s)	740, 818, 1546, 1559, 1637, 1869, 2085
AsuC2I	CCSGG	2 cut(s)	746, 747
AsuHPI	GGTGA	5 cut(s)	971, 1524, 1642, 1676, 1989
AvaI	CYCGRG	1 cut(s)	745
AvaII	GGWCC	4 cut(s)	740, 1546, 1559, 2085
BalI	TGGCCA	2 cut(s)	1589, 2033
BanII	GRGCYC	1 cut(s)	1024
BauI	CACGAG	1 cut(s)	1704
BbsI	GAAGAC	1 cut(s)	956
Bbv12I	GWGCWC	3 cut(s)	1024, 1359, 1503
BbvI	GCAGC	6 cut(s)	657, 1228, 1246, 1780, 2191, 2305
BccI	CCATC	6 cut(s)	637, 907, 994, 1279, 1396, 1826
BceAI	ACGGC	1 cut(s)	1902
BciT130I	CCWGG	5 cut(s)	519, 1566, 1914, 2035, 2302
BclI	TGATCA	1 cut(s)	1924
BcnI	CCSGG	2 cut(s)	746, 747
BcoDI	GTCTC	4 cut(s)	89, 134, 1472, 2008
BfaI	CTAG	2 cut(s)	1017, 1373
BglI	GCCNNNNNGGC	1 cut(s)	679
BglII	AGATCT	3 cut(s)	457, 552, 2073
BisI	GCNGC	6 cut(s)	671, 1242, 1260, 1794, 2205, 2294
BlsI	GCNGC	6 cut(s)	672, 1243, 1261, 1795, 2206, 2295
Bme1390I	CCNGG	7 cut(s)	519, 746, 747, 1566, 1914, 2035, 2302
Bme18I	GGWCC	4 cut(s)	740, 1546, 1559, 2085
BmeT110I	CYCGRG	1 cut(s)	745
BmgT120I	GGNCC	7 cut(s)	740, 818, 1546, 1559, 1637, 1869, 2085
BmiI	GGNNCC	5 cut(s)	570, 742, 1547, 1561, 1870
BmrFI	CCNGG	7 cut(s)	519, 746, 747, 1566, 1914, 2035, 2302
BmrI	ACTGGG	1 cut(s)	2352
BmsI	GCATC	8 cut(s)	120, 142, 394, 691, 1309, 1718, 1771, 2242
BmuI	ACTGGG	1 cut(s)	2352
BpiI	GAAGAC	1 cut(s)	956
BplI	GAGNNNNNCTC	2 cut(s)	670, 702
BpmI	CTGGAG	2 cut(s)	140, 864
BpuEI	CTTGAG	1 cut(s)	2008
BpuMI	CCSGG	2 cut(s)	746, 747
Bsa29I	ATCGAT	1 cut(s)	2178
BsaBI	GATNNNNATC	1 cut(s)	1012
BsaHI	GRCGYC	1 cut(s)	1135
BsaI	GGTCTC	1 cut(s)	134
BsaJI	CCNNGG	8 cut(s)	144, 166, 517, 744, 745, 1564, 1590, 2301
BsaWI	WCCGGW	1 cut(s)	2155
BsaXI	ACNNNNNCTCC	2 cut(s)	291, 321
Bsc4I	CCNNNNNNNGG	6 cut(s)	187, 722, 752, 1541, 1571, 2344
Bse1I	ACTGG	5 cut(s)	394, 572, 796, 2347, 2356
Bse3DI	GCAATG	2 cut(s)	216, 1749
Bse8I	GATNNNNATC	1 cut(s)	1012
BseAI	TCCGGA	1 cut(s)	2155
BseBI	CCWGG	5 cut(s)	519, 1566, 1914, 2035, 2302
BseCI	ATCGAT	1 cut(s)	2178
BseDI	CCNNGG	8 cut(s)	144, 166, 517, 744, 745, 1564, 1590, 2301
BseJI	GATNNNNATC	1 cut(s)	1012
BseLI	CCNNNNNNNGG	6 cut(s)	187, 722, 752, 1541, 1571, 2344
BseMI	GCAATG	2 cut(s)	216, 1749
BseMII	CTCAG	5 cut(s)	540, 668, 877, 2297, 2307
BseNI	ACTGG	5 cut(s)	394, 572, 796, 2347, 2356
BseRI	GAGGAG	4 cut(s)	489, 2152, 2155, 2231
BseXI	GCAGC	6 cut(s)	657, 1228, 1246, 1780, 2191, 2305
BseYI	CCCAGC	2 cut(s)	10, 1897
BsgI	GTGCAG	3 cut(s)	1234, 1245, 1698
Bsh1236I	CGCG	3 cut(s)	53, 1401, 1963
Bsh1285I	CGRYCG	1 cut(s)	51
BshFI	GGCC	7 cut(s)	820, 1449, 1589, 1638, 1871, 1917, 2033
BshVI	ATCGAT	1 cut(s)	2178
BsiEI	CGRYCG	1 cut(s)	51
BsiHKAI	GWGCWC	3 cut(s)	1024, 1359, 1503
BsiHKCI	CYCGRG	1 cut(s)	745
BsiSI	CCGG	2 cut(s)	746, 2156
BslI	CCNNNNNNNGG	6 cut(s)	187, 722, 752, 1541, 1571, 2344
BsmAI	GTCTC	4 cut(s)	89, 134, 1472, 2008
BsmBI	CGTCTC	1 cut(s)	89
BsmI	GAATGC	2 cut(s)	898, 1152
BsnI	GGCC	7 cut(s)	820, 1449, 1589, 1638, 1871, 1917, 2033
Bso31I	GGTCTC	1 cut(s)	134
BsoBI	CYCGRG	1 cut(s)	745
Bsp1286I	GDGCHC	3 cut(s)	1024, 1359, 1503
Bsp13I	TCCGGA	1 cut(s)	2155
Bsp1407I	TGTACA	1 cut(s)	313
Bsp143I	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
Bsp19I	CCATGG	1 cut(s)	144
BspACI	CCGC	7 cut(s)	51, 64, 884, 973, 1465, 2083, 2131
BspANI	GGCC	7 cut(s)	820, 1449, 1589, 1638, 1871, 1917, 2033
BspCNI	CTCAG	5 cut(s)	541, 669, 876, 2296, 2308
BspDI	ATCGAT	1 cut(s)	2178
BspEI	TCCGGA	1 cut(s)	2155
BspFNI	CGCG	3 cut(s)	53, 1401, 1963
BspLI	GGNNCC	5 cut(s)	570, 742, 1547, 1561, 1870
BspPI	GGATC	1 cut(s)	2354
BspQI	GCTCTTC	1 cut(s)	237
BspTNI	GGTCTC	1 cut(s)	134
BsrBI	CCGCTC	2 cut(s)	64, 2131
BsrDI	GCAATG	2 cut(s)	216, 1749
BsrGI	TGTACA	1 cut(s)	313
BsrI	ACTGG	5 cut(s)	394, 572, 796, 2347, 2356
BssECI	CCNNGG	8 cut(s)	144, 166, 517, 744, 745, 1564, 1590, 2301
BssMI	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
BssNAI	GTATAC	1 cut(s)	2040
BssNI	GRCGYC	1 cut(s)	1135
BssSI	CACGAG	1 cut(s)	1704
BssT1I	CCWWGG	2 cut(s)	144, 1590
Bst1107I	GTATAC	1 cut(s)	2040
Bst2BI	CACGAG	1 cut(s)	1704
Bst2UI	CCWGG	5 cut(s)	519, 1566, 1914, 2035, 2302
Bst4CI	ACNGT	7 cut(s)	83, 693, 959, 1061, 1408, 1483, 1855
Bst6I	CTCTTC	2 cut(s)	237, 1950
BstACI	GRCGYC	1 cut(s)	1135
BstAPI	GCANNNNNTGC	3 cut(s)	1790, 2354, 2375
BstAUI	TGTACA	1 cut(s)	313
BstC8I	GCNNGC	1 cut(s)	2081
BstDEI	CTNAG	6 cut(s)	549, 677, 863, 939, 2283, 2316
BstDSI	CCRYGG	2 cut(s)	144, 166
BstENI	CCTNNNNNAGG	2 cut(s)	185, 1539
BstFNI	CGCG	3 cut(s)	53, 1401, 1963
BstHHI	GCGC	1 cut(s)	1401
BstKTI	GATC	7 cut(s)	278, 460, 555, 1801, 1927, 2076, 2362
BstMAI	GTCTC	4 cut(s)	89, 134, 1472, 2008
BstMBI	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
BstMCI	CGRYCG	1 cut(s)	51
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 679, 1238, 1790, 2354, 2375, 2384
BstNI	CCWGG	5 cut(s)	519, 1566, 1914, 2035, 2302
BstNSI	RCATGY	1 cut(s)	1531
BstSCI	CCNGG	7 cut(s)	517, 744, 745, 1564, 1912, 2033, 2300
BstUI	CGCG	3 cut(s)	53, 1401, 1963
BstV1I	GCAGC	6 cut(s)	657, 1228, 1246, 1780, 2191, 2305
BstV2I	GAAGAC	1 cut(s)	956
BstX2I	RGATCY	3 cut(s)	457, 552, 2073
BstYI	RGATCY	3 cut(s)	457, 552, 2073
BstZ17I	GTATAC	1 cut(s)	2040
Bsu15I	ATCGAT	1 cut(s)	2178
BsuRI	GGCC	7 cut(s)	820, 1449, 1589, 1638, 1871, 1917, 2033
BsuTUI	ATCGAT	1 cut(s)	2178
BtgI	CCRYGG	2 cut(s)	144, 166
BtgZI	GCGATG	1 cut(s)	2265
BtsIMutI	CAGTG	5 cut(s)	546, 579, 674, 1251, 2059
Cac8I	GCNNGC	1 cut(s)	2081
CaiI	CAGNNNCTG	1 cut(s)	548
CfoI	GCGC	1 cut(s)	1401
Cfr13I	GGNCC	7 cut(s)	740, 818, 1546, 1559, 1637, 1869, 2085
Cfr9I	CCCGGG	1 cut(s)	745
ClaI	ATCGAT	1 cut(s)	2178
CseI	GACGC	1 cut(s)	1124
Csp6I	GTAC	1 cut(s)	314
CviAII	CATG	7 cut(s)	145, 1168, 1217, 1528, 1654, 1719, 1837
CviQI	GTAC	1 cut(s)	314
DdeI	CTNAG	6 cut(s)	549, 677, 863, 939, 2283, 2316
DpnI	GATC	7 cut(s)	277, 459, 554, 1800, 1926, 2075, 2361
DpnII	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
DraI	TTTAAA	2 cut(s)	697, 1978
DraIII	CACNNNGTG	3 cut(s)	959, 1656, 1721
DrdI	GACNNNNNNGTC	2 cut(s)	119, 1917
DseDI	GACNNNNNNGTC	2 cut(s)	119, 1917
EaeI	YGGCCR	3 cut(s)	1587, 1915, 2031
Eam1104I	CTCTTC	2 cut(s)	237, 1950
EarI	CTCTTC	2 cut(s)	237, 1950
EciI	GGCGGA	1 cut(s)	988
Ecl136II	GAGCTC	1 cut(s)	1022
Eco130I	CCWWGG	2 cut(s)	144, 1590
Eco147I	AGGCCT	1 cut(s)	1449
Eco24I	GRGCYC	1 cut(s)	1024
Eco31I	GGTCTC	1 cut(s)	134
Eco32I	GATATC	1 cut(s)	2065
Eco47I	GGWCC	4 cut(s)	740, 1546, 1559, 2085
Eco53kI	GAGCTC	1 cut(s)	1022
Eco57I	CTGAAG	2 cut(s)	1275, 2035
Eco88I	CYCGRG	1 cut(s)	745
EcoICRI	GAGCTC	1 cut(s)	1022
EcoNI	CCTNNNNNAGG	2 cut(s)	185, 1539
EcoO109I	RGGNCCY	2 cut(s)	1546, 1637
EcoRI	GAATTC	1 cut(s)	726
EcoRII	CCWGG	5 cut(s)	517, 1564, 1912, 2033, 2300
EcoRV	GATATC	1 cut(s)	2065
EcoT14I	CCWWGG	2 cut(s)	144, 1590
EcoT22I	ATGCAT	2 cut(s)	135, 1274
EcoT38I	GRGCYC	1 cut(s)	1024
ErhI	CCWWGG	2 cut(s)	144, 1590
Esp3I	CGTCTC	1 cut(s)	89
FaeI	CATG	7 cut(s)	148, 1171, 1220, 1531, 1657, 1722, 1840
FalI	AAGNNNNNCTT	4 cut(s)	26, 58, 1533, 1565
FatI	CATG	7 cut(s)	144, 1167, 1216, 1527, 1653, 1718, 1836
FauI	CCCGC	2 cut(s)	1458, 2124
FbaI	TGATCA	1 cut(s)	1924
FblI	GTMKAC	1 cut(s)	2039
Fnu4HI	GCNGC	6 cut(s)	671, 1242, 1260, 1794, 2205, 2294
FriOI	GRGCYC	1 cut(s)	1024
Fsp4HI	GCNGC	6 cut(s)	671, 1242, 1260, 1794, 2205, 2294
FspBI	CTAG	2 cut(s)	1017, 1373
GlaI	GCGC	1 cut(s)	1400
GluI	GCNGC	6 cut(s)	671, 1242, 1260, 1794, 2205, 2294
GsaI	CCCAGC	2 cut(s)	14, 1901
GsuI	CTGGAG	2 cut(s)	140, 864
HaeIII	GGCC	7 cut(s)	820, 1449, 1589, 1638, 1871, 1917, 2033
HapII	CCGG	2 cut(s)	746, 2156
HgaI	GACGC	1 cut(s)	1124
HhaI	GCGC	1 cut(s)	1401
Hin1I	GRCGYC	1 cut(s)	1135
Hin1II	CATG	7 cut(s)	148, 1171, 1220, 1531, 1657, 1722, 1840
Hin6I	GCGC	1 cut(s)	1399
HinP1I	GCGC	1 cut(s)	1399
HindIII	AAGCTT	1 cut(s)	432
HpaII	CCGG	2 cut(s)	746, 2156
HphI	GGTGA	5 cut(s)	971, 1524, 1642, 1676, 1989
Hpy166II	GTNNAC	3 cut(s)	316, 352, 2040
Hpy8I	GTNNAC	3 cut(s)	316, 352, 2040
Hpy99I	CGWCG	1 cut(s)	92
HpyAV	CCTTC	6 cut(s)	31, 196, 374, 1074, 1545, 2113
HpyCH4III	ACNGT	7 cut(s)	83, 693, 959, 1061, 1408, 1483, 1855
HpyCH4IV	ACGT	2 cut(s)	346, 1026
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 679, 1238, 1790, 2354, 2375, 2384
HpyF3I	CTNAG	6 cut(s)	549, 677, 863, 939, 2283, 2316
HpySE526I	ACGT	2 cut(s)	346, 1026
Hsp92I	GRCGYC	1 cut(s)	1135
Hsp92II	CATG	7 cut(s)	148, 1171, 1220, 1531, 1657, 1722, 1840
HspAI	GCGC	1 cut(s)	1399
Kpn2I	TCCGGA	1 cut(s)	2155
Ksp22I	TGATCA	1 cut(s)	1924
Kzo9I	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
LguI	GCTCTTC	1 cut(s)	237
LmnI	GCTCC	4 cut(s)	61, 159, 940, 1468
Lsp1109I	GCAGC	6 cut(s)	657, 1228, 1246, 1780, 2191, 2305
LweI	GCATC	8 cut(s)	120, 142, 394, 691, 1309, 1718, 1771, 2242
MaeI	CTAG	2 cut(s)	1017, 1373
MaeII	ACGT	2 cut(s)	346, 1026
MaeIII	GTNAC	3 cut(s)	385, 1345, 1530
MalI	GATC	7 cut(s)	277, 459, 554, 1800, 1926, 2075, 2361
MbiI	CCGCTC	2 cut(s)	64, 2131
MboI	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
MfeI	CAATTG	2 cut(s)	930, 1928
MflI	RGATCY	3 cut(s)	457, 552, 2073
MhlI	GDGCHC	3 cut(s)	1024, 1359, 1503
MlsI	TGGCCA	2 cut(s)	1589, 2033
MluCI	AATT	6 cut(s)	280, 726, 836, 930, 1520, 1928
MluNI	TGGCCA	2 cut(s)	1589, 2033
MlyI	GAGTC	5 cut(s)	20, 365, 988, 1061, 2228
MmeI	TCCRAC	3 cut(s)	48, 579, 1933
Mox20I	TGGCCA	2 cut(s)	1589, 2033
Mph1103I	ATGCAT	2 cut(s)	135, 1274
MroI	TCCGGA	1 cut(s)	2155
MroXI	GAANNNNTTC	3 cut(s)	41, 1146, 1771
MscI	TGGCCA	2 cut(s)	1589, 2033
MseI	TTAA	7 cut(s)	696, 764, 813, 1809, 1977, 2199, 2410
MslI	CAYNNNNRTG	2 cut(s)	1221, 1267
Msp20I	TGGCCA	2 cut(s)	1589, 2033
MspA1I	CMGCKG	1 cut(s)	2083
MspI	CCGG	2 cut(s)	746, 2156
MspR9I	CCNGG	7 cut(s)	519, 746, 747, 1566, 1914, 2035, 2302
MunI	CAATTG	2 cut(s)	930, 1928
Mva1269I	GAATGC	2 cut(s)	898, 1152
MvaI	CCWGG	5 cut(s)	519, 1566, 1914, 2035, 2302
MvnI	CGCG	3 cut(s)	53, 1401, 1963
MwoI	GCNNNNNNNGC	7 cut(s)	11, 679, 1238, 1790, 2354, 2375, 2384
NciI	CCSGG	2 cut(s)	746, 747
NcoI	CCATGG	1 cut(s)	144
NdeII	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
NlaIII	CATG	7 cut(s)	148, 1171, 1220, 1531, 1657, 1722, 1840
NlaIV	GGNNCC	5 cut(s)	570, 742, 1547, 1561, 1870
NmeAIII	GCCGAG	1 cut(s)	1049
NmuCI	GTSAC	1 cut(s)	1530
NsiI	ATGCAT	2 cut(s)	135, 1274
NspI	RCATGY	1 cut(s)	1531
PceI	AGGCCT	1 cut(s)	1449
PciSI	GCTCTTC	1 cut(s)	237
PcsI	WCGNNNNNNNCGW	2 cut(s)	26, 963
PctI	GAATGC	2 cut(s)	898, 1152
PdmI	GAANNNNTTC	3 cut(s)	41, 1146, 1771
PfeI	GAWTC	7 cut(s)	17, 252, 926, 1745, 1958, 2152, 2159
PflMI	CCANNNNNTGG	1 cut(s)	1571
PkrI	GCNGC	6 cut(s)	672, 1243, 1261, 1795, 2206, 2295
PleI	GAGTC	5 cut(s)	20, 365, 988, 1061, 2227
PpsI	GAGTC	5 cut(s)	20, 365, 988, 1061, 2227
PpuMI	RGGWCCY	1 cut(s)	1546
PshBI	ATTAAT	2 cut(s)	764, 813
Psp124BI	GAGCTC	1 cut(s)	1024
Psp5II	RGGWCCY	1 cut(s)	1546
Psp6I	CCWGG	5 cut(s)	517, 1564, 1912, 2033, 2300
PspFI	CCCAGC	2 cut(s)	10, 1897
PspGI	CCWGG	5 cut(s)	517, 1564, 1912, 2033, 2300
PspN4I	GGNNCC	5 cut(s)	570, 742, 1547, 1561, 1870
PspPI	GGNCC	7 cut(s)	740, 818, 1546, 1559, 1637, 1869, 2085
PspPPI	RGGWCCY	1 cut(s)	1546
PstNI	CAGNNNCTG	1 cut(s)	548
PsuI	RGATCY	3 cut(s)	457, 552, 2073
RsaI	GTAC	1 cut(s)	315
RsaNI	GTAC	1 cut(s)	314
RseI	CAYNNNNRTG	2 cut(s)	1221, 1267
SacI	GAGCTC	1 cut(s)	1024
SapI	GCTCTTC	1 cut(s)	237
SaqAI	TTAA	7 cut(s)	696, 764, 813, 1809, 1977, 2199, 2410
SatI	GCNGC	6 cut(s)	671, 1242, 1260, 1794, 2205, 2294
Sau3AI	GATC	7 cut(s)	275, 457, 552, 1798, 1924, 2073, 2359
Sau96I	GGNCC	7 cut(s)	740, 818, 1546, 1559, 1637, 1869, 2085
SchI	GAGTC	5 cut(s)	20, 365, 988, 1061, 2228
ScrFI	CCNGG	7 cut(s)	519, 746, 747, 1566, 1914, 2035, 2302
SduI	GDGCHC	3 cut(s)	1024, 1359, 1503
SfaNI	GCATC	8 cut(s)	120, 142, 394, 691, 1309, 1718, 1771, 2242
SinI	GGWCC	4 cut(s)	740, 1546, 1559, 2085
SmaI	CCCGGG	1 cut(s)	747
SmiMI	CAYNNNNRTG	2 cut(s)	1221, 1267
SmlI	CTYRAG	1 cut(s)	1987
SmoI	CTYRAG	1 cut(s)	1987
Sse9I	AATT	6 cut(s)	280, 726, 836, 930, 1520, 1928
SseBI	AGGCCT	1 cut(s)	1449
SsiI	CCGC	7 cut(s)	51, 64, 884, 973, 1465, 2083, 2131
SspI	AATATT	2 cut(s)	527, 2113
SspMI	CTAG	2 cut(s)	1017, 1373
SstI	GAGCTC	1 cut(s)	1024
StuI	AGGCCT	1 cut(s)	1449
StyD4I	CCNGG	7 cut(s)	517, 744, 745, 1564, 1912, 2033, 2300
StyI	CCWWGG	2 cut(s)	144, 1590
TaaI	ACNGT	7 cut(s)	83, 693, 959, 1061, 1408, 1483, 1855
TaiI	ACGT	2 cut(s)	349, 1029
TaqI	TCGA	8 cut(s)	29, 47, 128, 278, 292, 966, 1684, 2178
TasI	AATT	6 cut(s)	280, 726, 836, 930, 1520, 1928
TatI	WGTACW	1 cut(s)	313
TfiI	GAWTC	7 cut(s)	17, 252, 926, 1745, 1958, 2152, 2159
Tru1I	TTAA	7 cut(s)	696, 764, 813, 1809, 1977, 2199, 2410
Tru9I	TTAA	7 cut(s)	696, 764, 813, 1809, 1977, 2199, 2410
TscAI	CASTG	5 cut(s)	553, 579, 681, 1258, 2059
TseFI	GTSAC	1 cut(s)	1530
TseI	GCWGC	6 cut(s)	670, 1241, 1259, 1793, 2204, 2293
Tsp45I	GTSAC	1 cut(s)	1530
TspGWI	ACGGA	4 cut(s)	155, 214, 644, 1020
TspMI	CCCGGG	1 cut(s)	745
TspRI	CASTG	5 cut(s)	553, 579, 681, 1258, 2059
Van91I	CCANNNNNTGG	1 cut(s)	1571
VpaK11BI	GGWCC	4 cut(s)	740, 1546, 1559, 2085
VspI	ATTAAT	2 cut(s)	764, 813
XagI	CCTNNNNNAGG	2 cut(s)	185, 1539
XapI	RAATTY	3 cut(s)	280, 726, 1520
XbaI	TCTAGA	1 cut(s)	1016
XceI	RCATGY	1 cut(s)	1531
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XmaI	CCCGGG	1 cut(s)	745
XmiI	GTMKAC	1 cut(s)	2039
XmnI	GAANNNNTTC	3 cut(s)	41, 1146, 1771
XspI	CTAG	2 cut(s)	1017, 1373
Zsp2I	ATGCAT	2 cut(s)	135, 1274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.