Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001165

Physical Location & Seq

Genomic Coordinates Reverse (-)

15263353 .. 15265119

Gene Structure 1767 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG103300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGCTCAGATTCGTGAATTGGTTGAGCTGCCTCTGAGGCATCCTCAACTGTTTAAATCAATCGGTGTCAAACCACCAAAGGGTATTCTTCTCTATGGTCCTCCTGGAACCGGCAAGACTTTAATTGCAAGAGCTGTTGCTAATGAAACCGGAGCATTCTTTTTCTGCATCAATGGACCAGAAATCATGTCCAAGATGGCTGGAGAGAGTGAGAGCAACCTCAGGAAAGCTTTTGAGGAAGCAGAGAAGAATGCGCCATCAATCATATTTATTGATGAGATTGATTCCATTGCTCCCAAGAGAGAGAAGACTCATGGTGAAGTTGAGAGGAGGATTGTTTCCCAGCTCTTGACTCTTATGGATGGACTAAAGTCCCGAGCACATGTCATTGTTATGGGGGCTACTAATCGTCCAAACAGTATTGACCCGGCTCTTAGGAGGTTTGGAAGATTTGATAGGGAAATAGATATTGGTGTTCCAGATGAAGTTGGGCGTCTTGAGGTCCTCCGCATTCATAGCAAGAACATGAAGCTTGCCGAAGATGTCGATTTAGAAAGAGTTGCCAAGGATACTCATGGGTATGTTGGTGCTGATCTAGCTGCTTTATCTACTGAGGCTGCACTTCAATGCATCCGAGAGAAGATGGATGTGATTGACTTGGAAGATGAGACAATAGATGCTGAGATACTCAACTCAATGGCAGTAACAAACGAACATTTCCAGACTGCTCTTGGAACAAGCAACCCTTCTGCTCTTCGTGAAACTGTTGTTGAAGTTCCCAATGTTACTTGGGATGCTATTGGAGGTCTTGAAAATGTTAAGAAAGAACTTCAAGAGACTGTTCAATATCCTGTTGAGCATCCAGAGAAATTTGAGAAATTCGGTATGTCACCCTCAAAGGGAGTTCTTTTCTATGGTCCTCCTGGATGCGGTAAAACTCTTCTGGCCAAGGCTATAGCTAATGAGTGTCAGGCTAACTTCATCAGTATCAAGGGACCTGAGTTGCTCACCATGTGGTTTGGAGAGAGTGAGGCCAATGTAAGAGAAATTTTTGACAAGGCTCGTGCATCTGCTCCATGTGTCCTCTTTTTTGATGAGCTCGATTCCATTGCTACTAAAAGAGGTAGTAATGTAGGTGATTCTGGAGGTGCTGATAGGGTTTTGAACCAACTCCTTACTGAAATGGATGGAGTGTCTGCCAAGAAAACTGTTTTCATTATTGGGGCCACCAACAGACCTGACATTATAGACCCTGCACTTCTTCGTCCAGGACGTCTGGATCAATTGCTTTACATTCCTCTCCCTGATGAAGAATCCCGCTATCAAATATTCAAGTCTTGCTTGAGGAAGTCTCCTGTTTCCAAGTATGTGGACCTCAAAGCTCTTGCCAAGCACACAGAAGGTTTCAGTGGTGCTGATATCACTGAAATATGCCAGCGTGCTTGCAAATATGCCATCAGGGACAACATTGAGAAAGATATTGAGAGGGAGAGGAGGAGAAGTGACAATCCTGATGTTATAGAGGAGGATGACGATGAAGTATCAGAGATCACCGCAGCTCATTTTGAGGAATCAATGAAGTATGCTCGTAGGAGTGTTAGTGATGCTGATATCCGCAAGTACCAGGCATTTGCAACTACATTGCACCAGGCGAGAGGGTTTGGAGCAGATGAGTTCAGGTTCCCCAGCGGCTCCGGCGCTGCTGTTGGTTCTGATCCTTTTGCAACTACTACTGCTGGTGAAGCTGATGAAGACTTTTATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010038 GO:0010604 GO:0012505 GO:0016020 GO:0019222 GO:0031974 GO:0031981 GO:0042176 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046686 GO:0048518 GO:0050789 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko04141 ko05134 map04141 map05134

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

588

Amino Acids

64.98

Weight (kDa)

5.05

Isoelectric Point (pI)

43.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RuvB_N	PF05496	28 - 103	4.1e-06	Holliday junction DNA helicase RuvB P-loop domain
AAA	PF00004	29 - 158	9.2e-49	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	181 - 222	2.8e-14	AAA+ lid domain
AAA	PF00004	302 - 434	3.4e-47	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	457 - 495	1.6e-13	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53230
fragaria_vesca	FvH4_2g06940 FvH4_2g06950 FvH4_2g07260 FvH4_4g17680 FvH4_6g16220 FvH4_6g16220
malus_domestica	MD03G1125700.v1.1 MD04G1094400.v1.1 MD11G1142500.v1.1 MD12G1114300.v1.1 MD17G1225300.v1.1 MD17G1225400.v1.1 MD17G1225600.v1.1 MD17G1228800.v1.1
prunus_persica	Prupe.4G237600_v2.0.a1 Prupe.6G107800_v2.0.a1 Prupe.6G233700_v2.0.a1 Prupe.6G233700_v2.0.a1
pyrus_communis	pycom04g08940 pycom04g08950 pycom09g14580 pycom11g11820 pycom12g11360
rosa_chinensis	RchiOBHm_Chr3g0470061 RchiOBHm_Chr4g0421621 RchiOBHm_Chr6g0259281 RchiOBHm_Chr6g0259871
rosa_laevigata	RLG00000007663 RLG00000014503 RLG00000014543 RLG00000024300
rosa_multiflora	Rmu_co8522155.1_g000003 Rmu_sc0005600.1_g000001 Rmu_sc0009049.1_g000005 Rmu_sc0011974.1_g000005 Rmu_sc0033604.1_g000001 Rmu_sc0033605.1_g000001 Rmu_ssc0000050.1_g000089
rosa_roxburghii	Rroxscaffold_5G00363870 Rroxscaffold_6G00411220
rosa_rugosa	Rorug03G0106600 Rorug04G0173900 Rorug05G0586800 Rorug05G0590900
rosa_samantha	Rh3AG155800 Rh4CG248200 Rh6AG103300 Rh6AG103400 Rh6AG107600 Rh6BG095700 Rh6CG092600 Rh6CG096400
rosa_wichuraiana	Rw3G014670 Rw4G020040 Rw6G008920 Rw6G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1276
AciI	CCGC	6 cut(s)	508, 930, 1318, 1554, 1615, 1689
AclWI	GGATC	2 cut(s)	1287, 1709
AcoI	YGGCCR	1 cut(s)	945
AcsI	RAATTY	3 cut(s)	869, 878, 1047
AcyI	GRCGYC	2 cut(s)	493, 1273
AdeI	CACNNNGTG	1 cut(s)	1014
AfaI	GTAC	1 cut(s)	1622
AfiI	CCNNNNNNNGG	4 cut(s)	80, 110, 899, 929
AflIII	ACRYGT	1 cut(s)	382
AgsI	TTSAA	7 cut(s)	626, 773, 812, 833, 845, 1165, 1333
AjnI	CCWGG	5 cut(s)	103, 922, 1267, 1623, 1647
AjuI	GAANNNNNNNTTGG	2 cut(s)	453, 485
Alw21I	GWGCWC	2 cut(s)	382, 1101
Alw26I	GTCTC	3 cut(s)	662, 830, 1356
AlwI	GGATC	2 cut(s)	1287, 1709
Ama87I	CYCGRG	1 cut(s)	375
AoxI	GGCC	3 cut(s)	945, 1032, 1224
ApeKI	GCWGC	5 cut(s)	28, 599, 617, 1556, 1700
ApoI	RAATTY	3 cut(s)	869, 878, 1047
AspLEI	GCGC	2 cut(s)	256, 1700
AspS9I	GGNCC	7 cut(s)	98, 176, 502, 917, 995, 1224, 1372
AsuC2I	CCSGG	1 cut(s)	428
AsuHPI	GGTGA	6 cut(s)	329, 882, 1000, 1148, 1543, 1751
AvaI	CYCGRG	1 cut(s)	375
AvaII	GGWCC	6 cut(s)	98, 176, 502, 917, 995, 1372
AxyI	CCTNAGG	1 cut(s)	221
BalI	TGGCCA	1 cut(s)	947
BanII	GRGCYC	1 cut(s)	1101
BauI	CACGAG	1 cut(s)	1062
BbsI	GAAGAC	2 cut(s)	314, 1758
Bbv12I	GWGCWC	2 cut(s)	382, 1101
BbvI	GCAGC	5 cut(s)	15, 586, 604, 1568, 1687
BccI	CCATC	6 cut(s)	190, 265, 356, 637, 1181, 1463
BcgI	CGANNNNNNTGC	2 cut(s)	1091, 1125
BciT130I	CCWGG	5 cut(s)	105, 924, 1269, 1625, 1649
BciVI	GTATCC	1 cut(s)	562
BcnI	CCSGG	1 cut(s)	428
BcoDI	GTCTC	3 cut(s)	662, 830, 1356
BfaI	CTAG	1 cut(s)	596
BfmI	CTRYAG	1 cut(s)	954
BfoI	RGCGCY	1 cut(s)	1701
BfuI	GTATCC	1 cut(s)	562
BglI	GCCNNNNNGGC	1 cut(s)	37
BisI	GCNGC	6 cut(s)	29, 600, 618, 1557, 1690, 1701
BlsI	GCNGC	6 cut(s)	30, 601, 619, 1558, 1691, 1702
Bme1390I	CCNGG	6 cut(s)	105, 428, 924, 1269, 1625, 1649
Bme18I	GGWCC	6 cut(s)	98, 176, 502, 917, 995, 1372
BmeT110I	CYCGRG	1 cut(s)	375
BmgT120I	GGNCC	7 cut(s)	98, 176, 502, 917, 995, 1224, 1372
BmiI	GGNNCC	5 cut(s)	109, 996, 1225, 1682, 1693
BmrFI	CCNGG	6 cut(s)	105, 428, 924, 1269, 1625, 1649
BmsI	GCATC	9 cut(s)	49, 177, 639, 667, 784, 868, 917, 1076, 1594
BoxI	GACNNNNGTC	1 cut(s)	370
BpiI	GAAGAC	2 cut(s)	314, 1758
BplI	GAGNNNNNCTC	4 cut(s)	28, 60, 1336, 1368
BpmI	CTGGAG	2 cut(s)	222, 1164
BpuEI	CTTGAG	2 cut(s)	518, 1363
BpuMI	CCSGG	1 cut(s)	428
BsaHI	GRCGYC	2 cut(s)	493, 1273
BsaJI	CCNNGG	2 cut(s)	564, 948
BsaWI	WCCGGW	1 cut(s)	149
BsaXI	ACNNNNNCTCC	4 cut(s)	1486, 1516, 1585, 1615
Bsc4I	CCNNNNNNNGG	4 cut(s)	80, 110, 899, 929
Bse118I	RCCGGY	1 cut(s)	110
Bse21I	CCTNAGG	1 cut(s)	221
Bse3DI	GCAATG	3 cut(s)	288, 1107, 1640
BseBI	CCWGG	5 cut(s)	105, 924, 1269, 1625, 1649
BseDI	CCNNGG	2 cut(s)	564, 948
BseGI	GGATG	9 cut(s)	40, 367, 630, 652, 799, 859, 932, 1192, 1534
BseLI	CCNNNNNNNGG	4 cut(s)	80, 110, 899, 929
BseMI	GCAATG	3 cut(s)	288, 1107, 1640
BseMII	CTCAG	6 cut(s)	20, 26, 235, 603, 672, 990
BseRI	GAGGAG	4 cut(s)	343, 1507, 1510, 1538
BseXI	GCAGC	5 cut(s)	15, 586, 604, 1568, 1687
BseYI	CCCAGC	2 cut(s)	342, 1685
BsgI	GTGCAG	2 cut(s)	603, 1239
BshFI	GGCC	3 cut(s)	947, 1034, 1226
BsiHKAI	GWGCWC	2 cut(s)	382, 1101
BsiHKCI	CYCGRG	1 cut(s)	375
BsiSI	CCGG	4 cut(s)	111, 150, 428, 1695
BslFI	GGGAC	3 cut(s)	358, 1008, 1475
BslI	CCNNNNNNNGG	4 cut(s)	80, 110, 899, 929
BsmAI	GTCTC	3 cut(s)	662, 830, 1356
BsmFI	GGGAC	3 cut(s)	358, 1008, 1475
BsmI	GAATGC	3 cut(s)	155, 256, 510
BsnI	GGCC	3 cut(s)	947, 1034, 1226
BsoBI	CYCGRG	1 cut(s)	375
Bsp1286I	GDGCHC	2 cut(s)	382, 1101
Bsp143I	GATC	4 cut(s)	592, 1279, 1548, 1714
BspACI	CCGC	6 cut(s)	508, 930, 1318, 1554, 1615, 1689
BspANI	GGCC	3 cut(s)	947, 1034, 1226
BspCNI	CTCAG	6 cut(s)	19, 27, 234, 604, 673, 991
BspLI	GGNNCC	5 cut(s)	109, 996, 1225, 1682, 1693
BspPI	GGATC	2 cut(s)	1287, 1709
BspQI	GCTCTTC	1 cut(s)	759
BsrDI	GCAATG	3 cut(s)	288, 1107, 1640
BsrFI	RCCGGY	1 cut(s)	110
BssAI	RCCGGY	1 cut(s)	110
BssECI	CCNNGG	2 cut(s)	564, 948
BssMI	GATC	4 cut(s)	592, 1279, 1548, 1714
BssNI	GRCGYC	2 cut(s)	493, 1273
BssSI	CACGAG	1 cut(s)	1062
BssT1I	CCWWGG	2 cut(s)	564, 948
Bst2BI	CACGAG	1 cut(s)	1062
Bst2UI	CCWGG	5 cut(s)	105, 924, 1269, 1625, 1649
Bst4CI	ACNGT	5 cut(s)	51, 419, 766, 841, 1210
Bst6I	CTCTTC	2 cut(s)	759, 945
BstACI	GRCGYC	2 cut(s)	493, 1273
BstC8I	GCNNGC	4 cut(s)	534, 1436, 1440, 1444
BstDEI	CTNAG	7 cut(s)	6, 35, 221, 434, 612, 681, 999
BstF5I	GGATG	9 cut(s)	40, 367, 630, 652, 799, 859, 932, 1192, 1534
BstH2I	RGCGCY	1 cut(s)	1701
BstHHI	GCGC	2 cut(s)	256, 1700
BstKTI	GATC	4 cut(s)	595, 1282, 1551, 1717
BstMAI	GTCTC	3 cut(s)	662, 830, 1356
BstMBI	GATC	4 cut(s)	592, 1279, 1548, 1714
BstMWI	GCNNNNNNNGC	5 cut(s)	37, 516, 596, 1695, 1742
BstNI	CCWGG	5 cut(s)	105, 924, 1269, 1625, 1649
BstNSI	RCATGY	1 cut(s)	386
BstPAI	GACNNNNGTC	1 cut(s)	370
BstSCI	CCNGG	6 cut(s)	103, 426, 922, 1267, 1623, 1647
BstSFI	CTRYAG	1 cut(s)	954
BstV1I	GCAGC	5 cut(s)	15, 586, 604, 1568, 1687
BstV2I	GAAGAC	2 cut(s)	314, 1758
BstXI	CCANNNNNNTGG	1 cut(s)	1369
Bsu36I	CCTNAGG	1 cut(s)	221
BsuI	GTATCC	1 cut(s)	562
BsuRI	GGCC	3 cut(s)	947, 1034, 1226
BtsCI	GGATG	9 cut(s)	40, 367, 630, 652, 799, 859, 932, 1192, 1534
BtsIMutI	CAGTG	2 cut(s)	1414, 1422
Cac8I	GCNNGC	4 cut(s)	534, 1436, 1440, 1444
CfoI	GCGC	2 cut(s)	256, 1700
Cfr10I	RCCGGY	1 cut(s)	110
Cfr13I	GGNCC	7 cut(s)	98, 176, 502, 917, 995, 1224, 1372
CseI	GACGC	1 cut(s)	482
Csp6I	GTAC	1 cut(s)	1621
CviAII	CATG	7 cut(s)	187, 314, 383, 526, 575, 1012, 1077
CviQI	GTAC	1 cut(s)	1621
DdeI	CTNAG	7 cut(s)	6, 35, 221, 434, 612, 681, 999
DpnI	GATC	4 cut(s)	594, 1281, 1550, 1716
DpnII	GATC	4 cut(s)	592, 1279, 1548, 1714
DraI	TTTAAA	1 cut(s)	55
DraIII	CACNNNGTG	1 cut(s)	1014
EaeI	YGGCCR	1 cut(s)	945
Eam1104I	CTCTTC	2 cut(s)	759, 945
EarI	CTCTTC	2 cut(s)	759, 945
Ecl136II	GAGCTC	1 cut(s)	1099
Eco130I	CCWWGG	2 cut(s)	564, 948
Eco24I	GRGCYC	1 cut(s)	1101
Eco32I	GATATC	2 cut(s)	1420, 1612
Eco47I	GGWCC	6 cut(s)	98, 176, 502, 917, 995, 1372
Eco53kI	GAGCTC	1 cut(s)	1099
Eco81I	CCTNAGG	1 cut(s)	221
Eco88I	CYCGRG	1 cut(s)	375
EcoICRI	GAGCTC	1 cut(s)	1099
EcoO109I	RGGNCCY	2 cut(s)	502, 995
EcoRII	CCWGG	5 cut(s)	103, 922, 1267, 1623, 1647
EcoRV	GATATC	2 cut(s)	1420, 1612
EcoT14I	CCWWGG	2 cut(s)	564, 948
EcoT22I	ATGCAT	1 cut(s)	632
EcoT38I	GRGCYC	1 cut(s)	1101
ErhI	CCWWGG	2 cut(s)	564, 948
FaeI	CATG	7 cut(s)	190, 317, 386, 529, 578, 1015, 1080
FalI	AAGNNNNNCTT	4 cut(s)	730, 762, 1325, 1357
FaqI	GGGAC	3 cut(s)	358, 1008, 1475
FatI	CATG	7 cut(s)	186, 313, 382, 525, 574, 1011, 1076
FauI	CCCGC	1 cut(s)	1325
Fnu4HI	GCNGC	6 cut(s)	29, 600, 618, 1557, 1690, 1701
FokI	GGATG	9 cut(s)	27, 374, 617, 659, 806, 846, 939, 1199, 1541
FriOI	GRGCYC	1 cut(s)	1101
Fsp4HI	GCNGC	6 cut(s)	29, 600, 618, 1557, 1690, 1701
FspBI	CTAG	1 cut(s)	596
GlaI	GCGC	2 cut(s)	255, 1699
GluI	GCNGC	6 cut(s)	29, 600, 618, 1557, 1690, 1701
GsaI	CCCAGC	2 cut(s)	346, 1689
GsuI	CTGGAG	2 cut(s)	222, 1164
HaeII	RGCGCY	1 cut(s)	1701
HaeIII	GGCC	3 cut(s)	947, 1034, 1226
HapII	CCGG	4 cut(s)	111, 150, 428, 1695
HgaI	GACGC	1 cut(s)	482
HhaI	GCGC	2 cut(s)	256, 1700
Hin1I	GRCGYC	2 cut(s)	493, 1273
Hin1II	CATG	7 cut(s)	190, 317, 386, 529, 578, 1015, 1080
Hin6I	GCGC	2 cut(s)	254, 1698
HinP1I	GCGC	2 cut(s)	254, 1698
HindIII	AAGCTT	2 cut(s)	228, 530
HinfI	GANTC	8 cut(s)	10, 284, 310, 352, 1103, 1139, 1313, 1571
HpaII	CCGG	4 cut(s)	111, 150, 428, 1695
HphI	GGTGA	6 cut(s)	329, 882, 1000, 1148, 1543, 1751
Hpy166II	GTNNAC	1 cut(s)	1372
Hpy188I	TCNGA	5 cut(s)	9, 36, 635, 1546, 1714
Hpy8I	GTNNAC	1 cut(s)	1372
HpyAV	CCTTC	2 cut(s)	756, 1394
HpyCH4III	ACNGT	5 cut(s)	51, 419, 766, 841, 1210
HpyCH4IV	ACGT	1 cut(s)	1273
HpyF10VI	GCNNNNNNNGC	5 cut(s)	37, 516, 596, 1695, 1742
HpyF3I	CTNAG	7 cut(s)	6, 35, 221, 434, 612, 681, 999
HpySE526I	ACGT	1 cut(s)	1273
Hsp92I	GRCGYC	2 cut(s)	493, 1273
Hsp92II	CATG	7 cut(s)	190, 317, 386, 529, 578, 1015, 1080
HspAI	GCGC	2 cut(s)	254, 1698
Kzo9I	GATC	4 cut(s)	592, 1279, 1548, 1714
LguI	GCTCTTC	1 cut(s)	759
LmnI	GCTCC	5 cut(s)	152, 298, 1078, 1664, 1697
Lsp1109I	GCAGC	5 cut(s)	15, 586, 604, 1568, 1687
LweI	GCATC	9 cut(s)	49, 177, 639, 667, 784, 868, 917, 1076, 1594
MaeI	CTAG	1 cut(s)	596
MaeII	ACGT	1 cut(s)	1273
MaeIII	GTNAC	4 cut(s)	703, 784, 888, 1502
MalI	GATC	4 cut(s)	594, 1281, 1550, 1716
MboI	GATC	4 cut(s)	592, 1279, 1548, 1714
MfeI	CAATTG	1 cut(s)	1283
MhlI	GDGCHC	2 cut(s)	382, 1101
MlsI	TGGCCA	1 cut(s)	947
MluCI	AATT	6 cut(s)	17, 123, 869, 878, 1047, 1283
MluNI	TGGCCA	1 cut(s)	947
MlyI	GAGTC	2 cut(s)	304, 346
Mox20I	TGGCCA	1 cut(s)	947
Mph1103I	ATGCAT	1 cut(s)	632
MscI	TGGCCA	1 cut(s)	947
MseI	TTAA	3 cut(s)	54, 122, 819
MslI	CAYNNNNRTG	3 cut(s)	392, 579, 625
Msp20I	TGGCCA	1 cut(s)	947
MspA1I	CMGCKG	1 cut(s)	1689
MspI	CCGG	4 cut(s)	111, 150, 428, 1695
MspR9I	CCNGG	6 cut(s)	105, 428, 924, 1269, 1625, 1649
MunI	CAATTG	1 cut(s)	1283
Mva1269I	GAATGC	3 cut(s)	155, 256, 510
MvaI	CCWGG	5 cut(s)	105, 924, 1269, 1625, 1649
MwoI	GCNNNNNNNGC	5 cut(s)	37, 516, 596, 1695, 1742
NciI	CCSGG	1 cut(s)	428
NdeII	GATC	4 cut(s)	592, 1279, 1548, 1714
NlaIII	CATG	7 cut(s)	190, 317, 386, 529, 578, 1015, 1080
NlaIV	GGNNCC	5 cut(s)	109, 996, 1225, 1682, 1693
NmuCI	GTSAC	2 cut(s)	888, 1502
NsiI	ATGCAT	1 cut(s)	632
NspI	RCATGY	1 cut(s)	386
PciI	ACATGT	1 cut(s)	382
PciSI	GCTCTTC	1 cut(s)	759
PcsI	WCGNNNNNNNCGW	1 cut(s)	1270
PctI	GAATGC	3 cut(s)	155, 256, 510
PfeI	GAWTC	6 cut(s)	10, 284, 1103, 1139, 1313, 1571
PfoI	TCCNGGA	3 cut(s)	103, 922, 1267
PkrI	GCNGC	6 cut(s)	30, 601, 619, 1558, 1691, 1702
PleI	GAGTC	2 cut(s)	304, 346
PpsI	GAGTC	2 cut(s)	304, 346
PpuMI	RGGWCCY	2 cut(s)	502, 995
PscI	ACATGT	1 cut(s)	382
PshAI	GACNNNNGTC	1 cut(s)	370
Psp124BI	GAGCTC	1 cut(s)	1101
Psp5II	RGGWCCY	2 cut(s)	502, 995
Psp6I	CCWGG	5 cut(s)	103, 922, 1267, 1623, 1647
PspFI	CCCAGC	2 cut(s)	342, 1685
PspGI	CCWGG	5 cut(s)	103, 922, 1267, 1623, 1647
PspN4I	GGNNCC	5 cut(s)	109, 996, 1225, 1682, 1693
PspPI	GGNCC	7 cut(s)	98, 176, 502, 917, 995, 1224, 1372
PspPPI	RGGWCCY	2 cut(s)	502, 995
RsaI	GTAC	1 cut(s)	1622
RsaNI	GTAC	1 cut(s)	1621
RseI	CAYNNNNRTG	3 cut(s)	392, 579, 625
SacI	GAGCTC	1 cut(s)	1101
SapI	GCTCTTC	1 cut(s)	759
SaqAI	TTAA	3 cut(s)	54, 122, 819
SatI	GCNGC	6 cut(s)	29, 600, 618, 1557, 1690, 1701
Sau3AI	GATC	4 cut(s)	592, 1279, 1548, 1714
Sau96I	GGNCC	7 cut(s)	98, 176, 502, 917, 995, 1224, 1372
SchI	GAGTC	2 cut(s)	304, 346
ScrFI	CCNGG	6 cut(s)	105, 428, 924, 1269, 1625, 1649
SduI	GDGCHC	2 cut(s)	382, 1101
SfaNI	GCATC	9 cut(s)	49, 177, 639, 667, 784, 868, 917, 1076, 1594
SfcI	CTRYAG	1 cut(s)	954
SinI	GGWCC	6 cut(s)	98, 176, 502, 917, 995, 1372
SmiMI	CAYNNNNRTG	3 cut(s)	392, 579, 625
SmlI	CTYRAG	2 cut(s)	497, 1342
SmoI	CTYRAG	2 cut(s)	497, 1342
Sse9I	AATT	6 cut(s)	17, 123, 869, 878, 1047, 1283
SsiI	CCGC	6 cut(s)	508, 930, 1318, 1554, 1615, 1689
SspI	AATATT	1 cut(s)	1329
SspMI	CTAG	1 cut(s)	596
SstI	GAGCTC	1 cut(s)	1101
StyD4I	CCNGG	6 cut(s)	103, 426, 922, 1267, 1623, 1647
StyI	CCWWGG	2 cut(s)	564, 948
TaaI	ACNGT	5 cut(s)	51, 419, 766, 841, 1210
TaiI	ACGT	1 cut(s)	1276
TaqI	TCGA	2 cut(s)	546, 1101
TasI	AATT	6 cut(s)	17, 123, 869, 878, 1047, 1283
TauI	GCSGC	1 cut(s)	1692
TfiI	GAWTC	6 cut(s)	10, 284, 1103, 1139, 1313, 1571
Tru1I	TTAA	3 cut(s)	54, 122, 819
Tru9I	TTAA	3 cut(s)	54, 122, 819
TscAI	CASTG	2 cut(s)	1414, 1429
TseFI	GTSAC	2 cut(s)	888, 1502
TseI	GCWGC	5 cut(s)	28, 599, 617, 1556, 1700
Tsp45I	GTSAC	2 cut(s)	888, 1502
TspRI	CASTG	2 cut(s)	1414, 1429
VpaK11BI	GGWCC	6 cut(s)	98, 176, 502, 917, 995, 1372
XapI	RAATTY	3 cut(s)	869, 878, 1047
XceI	RCATGY	1 cut(s)	386
XcmI	CCANNNNNNNNNTGG	1 cut(s)	728
XspI	CTAG	1 cut(s)	596
ZraI	GACGTC	1 cut(s)	1274
Zsp2I	ATGCAT	1 cut(s)	632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.