Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001165

Physical Location & Seq

Genomic Coordinates Forward (+)

8531879 .. 8534551

Gene Structure 2673 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0106600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGAGCCTAATACAGTCAAGCCGGGATTCCTGAAGAACATTCTGGTGCGGTGTTTCCTGTTCGGCGTCGTCATGGTACTGTTCCGGTTCGCTTACGTCATCACCGTCACCGGCGAGTCCTGTAAAGTCGGCAACTTTTGCTTTCTTAATCTTCCGGAGAATCTCAACTTCGTCATCGCCAGCACCGGAGCCTCCGCCGCCGTGGCGGCCAACGGCGCCGTTTCGACGAGTGCGGTGGGGCCGAAGAGGAACGACATGTACACCAGCAAGGACTGGATCAAGGCCGTCCATTTTTACTCCGCTGTTTTCCAAGATCTGATCTCGCAAGGGTTTCTGTCGCCGAAATCCAAGTCTCTGTGCGTCGAAACCCCGACGGGGCAGGAAGTCTACGCCTTGAAAGAGAACGGCGTCAAGGACGCGGTCGGGATTTTCAAGAAAGCCTCGAGGCCTTTGGTGATTCCCGGCGAGGCGCACCGGATGCCGTTCGCCGATAACTCGTTCGACTTCGTTTTCTCCGGCAACGGCCGCCTCGACAAGTCGCCGAAGGCTGCGGAGTTCGCGGCGGAGATCGTACGGACGCTCAGGCCCGAAGGGTTTGCGGTGGTCCACATCGGAGCCAAAGATACTTATAGCTTCCATTCTTTTATTGATTTGTTCAATTGCTGCAAGTTAGTTACTTCACGCGACATCGACGGCTACAATTCGTCGATGCCGCATATACGTGAAATGGTGTTGAGGAAGGAGTGTGATGCTACTAATGAGGTTGTGAATTCCGGTAATAAGTGCTCGGTTCCGGCGCATAAGCTTGAGTTGGTGAGGAAAGCGGAGCCAATTATTCAAATTGAGCCAATGAAGCCGTGGATTACTTTGAAAAAGAATATACAGAATGTGAAGTACCTTCCGTCGATGGCGGATATTAGCTTTAAGAGGAGGTATGCTTATGTTGACGTTGGAGCTAGGAGCTATGGTTCGAGTATTGGTAGCTGGTTCAAGAAGCAGTACCCGAAGCAGAATAAGACGTTTGAAGTTTTCGCTATTGAGGCTGATAAGATTTTTCATGAACAGTACAAGCTGAAGAAGGGGATTACTTTGCTGCCGTATGCTGCCTGGGTGAGGAATGAGACCTTGTCGTTTGAGATTAACGGAGACCCCGGCGAGAAGGTGAAGGAGAAGGGTAGAGGAATGGGGAGGATTCAGCCGGTGAAGTCGGCTAATGGGGGGTTTGATGGTCAGGTGGATAGGATTCAGGGGTTTGATTTTGCGAATTGGGTGAAGAGTACTTTCACAGAGAAGGATTTCGTGGTGATGAAGATGGATGTGGAAGGGACGGAATTTGATTTGATTCCGAGGCTGTTTGAGACCGGAGCAATTTGTTTGATCGATGAGGTGTTTCTTGAATGCCATTACAATAGGTGGCAGAGGACACGCCCTGGTGAGAGAAGTGCAAAGTATGAAAAAACTTATGGCCAGTGCTTGGACTTGTTTACTTCACTAAGGCAAAGTGGGGTTCTTGTTCATCAGTGGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010038 GO:0010604 GO:0012505 GO:0016020 GO:0019222 GO:0031974 GO:0031981 GO:0042176 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046686 GO:0048518 GO:0050789 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko04141 ko05134 map04141 map05134

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

509

Amino Acids

57.34

Weight (kDa)

9.01

Isoelectric Point (pI)

34.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_11	PF08241	152 - 201	4.9e-07	Methyltransferase domain
DUF7870	PF25276	282 - 353	4e-09	Domain of unknown function (DUF7870)
DUF7870	PF25276	415 - 509	1.2e-19	Domain of unknown function (DUF7870)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53230
fragaria_vesca	FvH4_2g06940 FvH4_2g06950 FvH4_2g07260 FvH4_4g17680 FvH4_6g16220 FvH4_6g16220
malus_domestica	MD03G1125700.v1.1 MD04G1094400.v1.1 MD11G1142500.v1.1 MD12G1114300.v1.1 MD17G1225300.v1.1 MD17G1225400.v1.1 MD17G1225600.v1.1 MD17G1228800.v1.1
prunus_persica	Prupe.4G237600_v2.0.a1 Prupe.6G107800_v2.0.a1 Prupe.6G233700_v2.0.a1 Prupe.6G233700_v2.0.a1
pyrus_communis	pycom04g08940 pycom04g08950 pycom09g14580 pycom11g11820 pycom12g11360
rosa_chinensis	RchiOBHm_Chr3g0470061 RchiOBHm_Chr4g0421621 RchiOBHm_Chr6g0259281 RchiOBHm_Chr6g0259871
rosa_laevigata	RLG00000007663 RLG00000014503 RLG00000014543 RLG00000024300
rosa_multiflora	Rmu_co8522155.1_g000003 Rmu_sc0005600.1_g000001 Rmu_sc0009049.1_g000005 Rmu_sc0011974.1_g000005 Rmu_sc0033604.1_g000001 Rmu_sc0033605.1_g000001 Rmu_ssc0000050.1_g000089
rosa_roxburghii	Rroxscaffold_5G00363870 Rroxscaffold_6G00411220
rosa_rugosa	Rorug03G0106600 Rorug04G0173900 Rorug05G0586800 Rorug05G0590900
rosa_samantha	Rh3AG155800 Rh4CG248200 Rh6AG103300 Rh6AG103400 Rh6AG107600 Rh6BG095700 Rh6CG092600 Rh6CG096400
rosa_wichuraiana	Rw3G014670 Rw4G020040 Rw6G008920 Rw6G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	442
AccB1I	GGYRCC	1 cut(s)	215
AccB7I	CCANNNNNTGG	1 cut(s)	1474
AccI	GTMKAC	1 cut(s)	387
AccII	CGCG	3 cut(s)	419, 560, 684
AccIII	TCCGGA	1 cut(s)	154
AclWI	GGATC	1 cut(s)	284
AcoI	YGGCCR	3 cut(s)	207, 523, 1465
AcsI	RAATTY	2 cut(s)	769, 1331
AcuI	CTGAAG	2 cut(s)	53, 1094
AcyI	GRCGYC	3 cut(s)	66, 216, 408
AfaI	GTAC	7 cut(s)	78, 260, 573, 896, 1001, 1067, 1279
AfiI	CCNNNNNNNGG	3 cut(s)	375, 1113, 1474
AflIII	ACRYGT	1 cut(s)	255
AgsI	TTSAA	8 cut(s)	397, 433, 658, 839, 871, 991, 1025, 1397
AjnI	CCWGG	2 cut(s)	1106, 1429
AloI	GAACNNNNNNTCC	2 cut(s)	952, 984
AluBI	AGCT	7 cut(s)	633, 805, 921, 956, 963, 984, 1072
AluI	AGCT	7 cut(s)	633, 805, 921, 956, 963, 984, 1072
Alw21I	GWGCWC	1 cut(s)	788
Alw26I	GTCTC	4 cut(s)	357, 1115, 1140, 1352
AlwI	GGATC	1 cut(s)	284
Ama87I	CYCGRG	1 cut(s)	442
Aor13HI	TCCGGA	1 cut(s)	154
AoxI	GGCC	7 cut(s)	207, 239, 282, 446, 523, 584, 1465
ApeKI	GCWGC	4 cut(s)	548, 663, 1093, 1103
ApoI	RAATTY	2 cut(s)	769, 1331
ArsI	GACNNNNNNTTYG	2 cut(s)	335, 367
Asp700I	GAANNNNTTC	1 cut(s)	1295
AspLEI	GCGC	3 cut(s)	218, 472, 799
AspS9I	GGNCC	3 cut(s)	239, 585, 604
AsuC2I	CCSGG	3 cut(s)	24, 462, 1152
AvaI	CYCGRG	1 cut(s)	442
AvaII	GGWCC	1 cut(s)	604
BalI	TGGCCA	1 cut(s)	1467
BanI	GGYRCC	1 cut(s)	215
Bbv12I	GWGCWC	1 cut(s)	788
BbvI	GCAGC	4 cut(s)	535, 650, 1080, 1090
BccI	CCATC	3 cut(s)	901, 1220, 1306
BcgI	CGANNNNNNTGC	2 cut(s)	578, 612
BciT130I	CCWGG	2 cut(s)	1108, 1431
BcnI	CCSGG	3 cut(s)	24, 462, 1152
BcoDI	GTCTC	4 cut(s)	357, 1115, 1140, 1352
BfaI	CTAG	1 cut(s)	957
BfoI	RGCGCY	1 cut(s)	219
BglI	GCCNNNNNGGC	2 cut(s)	203, 206
BglII	AGATCT	1 cut(s)	313
BisI	GCNGC	9 cut(s)	198, 207, 526, 549, 561, 664, 713, 1094, 1104
BlsI	GCNGC	9 cut(s)	199, 208, 527, 550, 562, 665, 714, 1095, 1105
BmcAI	AGTACT	1 cut(s)	1279
Bme1390I	CCNGG	5 cut(s)	24, 462, 1108, 1152, 1431
Bme18I	GGWCC	1 cut(s)	604
BmeT110I	CYCGRG	1 cut(s)	442
BmgT120I	GGNCC	3 cut(s)	239, 585, 604
BmiI	GGNNCC	7 cut(s)	6, 190, 217, 240, 616, 792, 828
BmrFI	CCNGG	5 cut(s)	24, 462, 1108, 1152, 1431
BmsI	GCATC	3 cut(s)	468, 699, 739
Bpu10I	CCTNAGC	1 cut(s)	581
BpuEI	CTTGAG	1 cut(s)	827
BpuMI	CCSGG	3 cut(s)	24, 462, 1152
Bsa29I	ATCGAT	1 cut(s)	1380
BsaAI	YACGTR	1 cut(s)	722
BsaHI	GRCGYC	3 cut(s)	66, 216, 408
BsaI	GGTCTC	3 cut(s)	1115, 1140, 1352
BsaJI	CCNNGG	6 cut(s)	201, 857, 1107, 1150, 1346, 1429
BsaWI	WCCGGW	6 cut(s)	84, 154, 185, 474, 773, 1361
BsaXI	ACNNNNNCTCC	2 cut(s)	952, 982
Bsc4I	CCNNNNNNNGG	3 cut(s)	375, 1113, 1474
Bse118I	RCCGGY	2 cut(s)	110, 1198
Bse1I	ACTGG	2 cut(s)	278, 1468
BseAI	TCCGGA	1 cut(s)	154
BseBI	CCWGG	2 cut(s)	1108, 1431
BseCI	ATCGAT	1 cut(s)	1380
BseDI	CCNNGG	6 cut(s)	201, 857, 1107, 1150, 1346, 1429
BseGI	GGATG	2 cut(s)	483, 1321
BseLI	CCNNNNNNNGG	3 cut(s)	375, 1113, 1474
BseMII	CTCAG	1 cut(s)	595
BseNI	ACTGG	2 cut(s)	278, 1468
BseRI	GAGGAG	1 cut(s)	943
BseX3I	CGGCCG	1 cut(s)	523
BseXI	GCAGC	4 cut(s)	535, 650, 1080, 1090
Bsh1236I	CGCG	3 cut(s)	419, 560, 684
Bsh1285I	CGRYCG	2 cut(s)	423, 526
BshFI	GGCC	7 cut(s)	209, 241, 284, 448, 525, 586, 1467
BshNI	GGYRCC	1 cut(s)	215
BshVI	ATCGAT	1 cut(s)	1380
BsiEI	CGRYCG	2 cut(s)	423, 526
BsiHKAI	GWGCWC	1 cut(s)	788
BsiHKCI	CYCGRG	1 cut(s)	442
BsiWI	CGTACG	1 cut(s)	571
BslFI	GGGAC	1 cut(s)	1339
BslI	CCNNNNNNNGG	3 cut(s)	375, 1113, 1474
BsmAI	GTCTC	4 cut(s)	357, 1115, 1140, 1352
BsmFI	GGGAC	1 cut(s)	1339
BsmI	GAATGC	1 cut(s)	1403
BsnI	GGCC	7 cut(s)	209, 241, 284, 448, 525, 586, 1467
Bso31I	GGTCTC	3 cut(s)	1115, 1140, 1352
BsoBI	CYCGRG	1 cut(s)	442
Bsp1286I	GDGCHC	1 cut(s)	788
Bsp13I	TCCGGA	1 cut(s)	154
Bsp1407I	TGTACA	1 cut(s)	258
Bsp143I	GATC	5 cut(s)	276, 313, 318, 567, 1377
BspANI	GGCC	7 cut(s)	209, 241, 284, 448, 525, 586, 1467
BspCNI	CTCAG	1 cut(s)	594
BspDI	ATCGAT	1 cut(s)	1380
BspEI	TCCGGA	1 cut(s)	154
BspFNI	CGCG	3 cut(s)	419, 560, 684
BspHI	TCATGA	1 cut(s)	1057
BspLI	GGNNCC	7 cut(s)	6, 190, 217, 240, 616, 792, 828
BspPI	GGATC	1 cut(s)	284
BspT107I	GGYRCC	1 cut(s)	215
BspTNI	GGTCTC	3 cut(s)	1115, 1140, 1352
BsrFI	RCCGGY	2 cut(s)	110, 1198
BsrGI	TGTACA	1 cut(s)	258
BsrI	ACTGG	2 cut(s)	278, 1468
BssAI	RCCGGY	2 cut(s)	110, 1198
BssECI	CCNNGG	6 cut(s)	201, 857, 1107, 1150, 1346, 1429
BssMI	GATC	5 cut(s)	276, 313, 318, 567, 1377
BssNI	GRCGYC	3 cut(s)	66, 216, 408
Bst2UI	CCWGG	2 cut(s)	1108, 1431
Bst4CI	ACNGT	4 cut(s)	16, 81, 106, 1065
Bst6I	CTCTTC	2 cut(s)	239, 1268
BstACI	GRCGYC	3 cut(s)	66, 216, 408
BstAPI	GCANNNNNTGC	2 cut(s)	138, 478
BstAUI	TGTACA	1 cut(s)	258
BstBAI	YACGTR	1 cut(s)	722
BstC8I	GCNNGC	1 cut(s)	181
BstDEI	CTNAG	2 cut(s)	581, 1493
BstDSI	CCRYGG	2 cut(s)	201, 857
BstENI	CCTNNNNNAGG	1 cut(s)	1111
BstF5I	GGATG	2 cut(s)	483, 1321
BstFNI	CGCG	3 cut(s)	419, 560, 684
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	3 cut(s)	218, 472, 799
BstKTI	GATC	5 cut(s)	279, 316, 321, 570, 1380
BstMAI	GTCTC	4 cut(s)	357, 1115, 1140, 1352
BstMBI	GATC	5 cut(s)	276, 313, 318, 567, 1377
BstMCI	CGRYCG	2 cut(s)	423, 526
BstNI	CCWGG	2 cut(s)	1108, 1431
BstNSI	RCATGY	1 cut(s)	259
BstSCI	CCNGG	5 cut(s)	22, 460, 1106, 1150, 1429
BstUI	CGCG	3 cut(s)	419, 560, 684
BstV1I	GCAGC	4 cut(s)	535, 650, 1080, 1090
BstX2I	RGATCY	1 cut(s)	313
BstYI	RGATCY	1 cut(s)	313
BstZI	CGGCCG	1 cut(s)	523
Bsu15I	ATCGAT	1 cut(s)	1380
BsuRI	GGCC	7 cut(s)	209, 241, 284, 448, 525, 586, 1467
BsuTUI	ATCGAT	1 cut(s)	1380
BtgI	CCRYGG	2 cut(s)	201, 857
BtgZI	GCGATG	1 cut(s)	160
BtsCI	GGATG	2 cut(s)	483, 1321
BtsIMutI	CAGTG	2 cut(s)	1475, 1526
Cac8I	GCNNGC	1 cut(s)	181
CciI	TCATGA	1 cut(s)	1057
CfoI	GCGC	3 cut(s)	218, 472, 799
Cfr10I	RCCGGY	2 cut(s)	110, 1198
Cfr13I	GGNCC	3 cut(s)	239, 585, 604
ClaI	ATCGAT	1 cut(s)	1380
CseI	GACGC	5 cut(s)	55, 349, 397, 425, 586
Csp6I	GTAC	7 cut(s)	77, 259, 572, 895, 1000, 1066, 1278
CviAII	CATG	3 cut(s)	73, 256, 1058
CviQI	GTAC	7 cut(s)	77, 259, 572, 895, 1000, 1066, 1278
DdeI	CTNAG	2 cut(s)	581, 1493
DinI	GGCGCC	1 cut(s)	217
DpnI	GATC	5 cut(s)	278, 315, 320, 569, 1379
DpnII	GATC	5 cut(s)	276, 313, 318, 567, 1377
EaeI	YGGCCR	3 cut(s)	207, 523, 1465
EagI	CGGCCG	1 cut(s)	523
Eam1104I	CTCTTC	2 cut(s)	239, 1268
EarI	CTCTTC	2 cut(s)	239, 1268
EciI	GGCGGA	3 cut(s)	184, 578, 926
EclXI	CGGCCG	1 cut(s)	523
Eco147I	AGGCCT	1 cut(s)	448
Eco31I	GGTCTC	3 cut(s)	1115, 1140, 1352
Eco47I	GGWCC	1 cut(s)	604
Eco52I	CGGCCG	1 cut(s)	523
Eco57I	CTGAAG	2 cut(s)	53, 1094
Eco88I	CYCGRG	1 cut(s)	442
EcoNI	CCTNNNNNAGG	1 cut(s)	1111
EcoRI	GAATTC	1 cut(s)	769
EcoRII	CCWGG	2 cut(s)	1106, 1429
EgeI	GGCGCC	1 cut(s)	217
EheI	GGCGCC	1 cut(s)	217
FaeI	CATG	3 cut(s)	76, 259, 1061
FaqI	GGGAC	1 cut(s)	1339
FatI	CATG	3 cut(s)	72, 255, 1057
FblI	GTMKAC	1 cut(s)	387
Fnu4HI	GCNGC	9 cut(s)	198, 207, 526, 549, 561, 664, 713, 1094, 1104
FokI	GGATG	2 cut(s)	490, 1328
Fsp4HI	GCNGC	9 cut(s)	198, 207, 526, 549, 561, 664, 713, 1094, 1104
FspBI	CTAG	1 cut(s)	957
GlaI	GCGC	3 cut(s)	217, 471, 798
GluI	GCNGC	9 cut(s)	198, 207, 526, 549, 561, 664, 713, 1094, 1104
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	7 cut(s)	209, 241, 284, 448, 525, 586, 1467
HgaI	GACGC	5 cut(s)	55, 349, 397, 425, 586
HhaI	GCGC	3 cut(s)	218, 472, 799
Hin1I	GRCGYC	3 cut(s)	66, 216, 408
Hin1II	CATG	3 cut(s)	76, 259, 1061
Hin6I	GCGC	3 cut(s)	216, 470, 797
HinP1I	GCGC	3 cut(s)	216, 470, 797
HincII	GTYRAC	1 cut(s)	946
HindII	GTYRAC	1 cut(s)	946
HindIII	AAGCTT	1 cut(s)	803
HinfI	GANTC	7 cut(s)	27, 116, 160, 457, 1192, 1243, 1342
Hpy166II	GTNNAC	5 cut(s)	261, 388, 607, 946, 1485
Hpy188I	TCNGA	3 cut(s)	318, 614, 1347
Hpy188III	TCNNGA	7 cut(s)	31, 155, 424, 433, 991, 1058, 1394
Hpy8I	GTNNAC	5 cut(s)	261, 388, 607, 946, 1485
Hpy99I	CGWCG	7 cut(s)	71, 229, 365, 376, 695, 709, 907
HpyCH4III	ACNGT	4 cut(s)	16, 81, 106, 1065
HpyCH4IV	ACGT	4 cut(s)	96, 721, 948, 1019
HpyCH4V	TGCA	2 cut(s)	666, 1445
HpyF3I	CTNAG	2 cut(s)	581, 1493
HpySE526I	ACGT	4 cut(s)	96, 721, 948, 1019
Hsp92I	GRCGYC	3 cut(s)	66, 216, 408
Hsp92II	CATG	3 cut(s)	76, 259, 1061
HspAI	GCGC	3 cut(s)	216, 470, 797
KasI	GGCGCC	1 cut(s)	215
Kpn2I	TCCGGA	1 cut(s)	154
Kzo9I	GATC	5 cut(s)	276, 313, 318, 567, 1377
LmnI	GCTCC	7 cut(s)	4, 188, 614, 826, 953, 960, 1364
Lsp1109I	GCAGC	4 cut(s)	535, 650, 1080, 1090
LweI	GCATC	3 cut(s)	468, 699, 739
MaeI	CTAG	1 cut(s)	957
MaeII	ACGT	4 cut(s)	96, 721, 948, 1019
MaeIII	GTNAC	2 cut(s)	106, 673
MalI	GATC	5 cut(s)	278, 315, 320, 569, 1379
MboI	GATC	5 cut(s)	276, 313, 318, 567, 1377
MboII	GAAGA	6 cut(s)	46, 143, 256, 1087, 1285, 1321
MfeI	CAATTG	1 cut(s)	658
MflI	RGATCY	1 cut(s)	313
MhlI	GDGCHC	1 cut(s)	788
MlsI	TGGCCA	1 cut(s)	1467
MluCI	AATT	8 cut(s)	658, 700, 769, 831, 840, 1264, 1331, 1368
MluNI	TGGCCA	1 cut(s)	1467
Mly113I	GGCGCC	1 cut(s)	216
MlyI	GAGTC	1 cut(s)	125
MmeI	TCCRAC	1 cut(s)	931
Mox20I	TGGCCA	1 cut(s)	1467
MroI	TCCGGA	1 cut(s)	154
MroXI	GAANNNNTTC	1 cut(s)	1295
MscI	TGGCCA	1 cut(s)	1467
MseI	TTAA	3 cut(s)	147, 924, 1140
MslI	CAYNNNNRTG	2 cut(s)	44, 720
Msp20I	TGGCCA	1 cut(s)	1467
MspA1I	CMGCKG	1 cut(s)	302
MspR9I	CCNGG	5 cut(s)	24, 462, 1108, 1152, 1431
MunI	CAATTG	1 cut(s)	658
Mva1269I	GAATGC	1 cut(s)	1403
MvaI	CCWGG	2 cut(s)	1108, 1431
MvnI	CGCG	3 cut(s)	419, 560, 684
NarI	GGCGCC	1 cut(s)	216
NciI	CCSGG	3 cut(s)	24, 462, 1152
NdeII	GATC	5 cut(s)	276, 313, 318, 567, 1377
NlaIII	CATG	3 cut(s)	76, 259, 1061
NlaIV	GGNNCC	7 cut(s)	6, 190, 217, 240, 616, 792, 828
NmuCI	GTSAC	1 cut(s)	106
NspI	RCATGY	1 cut(s)	259
PaeR7I	CTCGAG	1 cut(s)	442
PagI	TCATGA	1 cut(s)	1057
PceI	AGGCCT	1 cut(s)	448
PciI	ACATGT	1 cut(s)	255
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 528
PctI	GAATGC	1 cut(s)	1403
PdmI	GAANNNNTTC	1 cut(s)	1295
PfeI	GAWTC	6 cut(s)	27, 160, 457, 1192, 1243, 1342
Pfl23II	CGTACG	1 cut(s)	571
PflFI	GACNNNGTC	2 cut(s)	419, 1126
PflMI	CCANNNNNTGG	1 cut(s)	1474
PkrI	GCNGC	9 cut(s)	199, 208, 527, 550, 562, 665, 714, 1095, 1105
PleI	GAGTC	1 cut(s)	124
PluTI	GGCGCC	1 cut(s)	219
PpsI	GAGTC	1 cut(s)	124
Ppu21I	YACGTR	1 cut(s)	722
PscI	ACATGT	1 cut(s)	255
Psp6I	CCWGG	2 cut(s)	1106, 1429
PspGI	CCWGG	2 cut(s)	1106, 1429
PspLI	CGTACG	1 cut(s)	571
PspN4I	GGNNCC	7 cut(s)	6, 190, 217, 240, 616, 792, 828
PspPI	GGNCC	3 cut(s)	239, 585, 604
PspXI	VCTCGAGB	1 cut(s)	442
PsrI	GAACNNNNNNTAC	2 cut(s)	242, 274
PsuI	RGATCY	1 cut(s)	313
PsyI	GACNNNGTC	2 cut(s)	419, 1126
RsaI	GTAC	7 cut(s)	78, 260, 573, 896, 1001, 1067, 1279
RsaNI	GTAC	7 cut(s)	77, 259, 572, 895, 1000, 1066, 1278
RseI	CAYNNNNRTG	2 cut(s)	44, 720
SaqAI	TTAA	3 cut(s)	147, 924, 1140
SatI	GCNGC	9 cut(s)	198, 207, 526, 549, 561, 664, 713, 1094, 1104
Sau3AI	GATC	5 cut(s)	276, 313, 318, 567, 1377
Sau96I	GGNCC	3 cut(s)	239, 585, 604
ScaI	AGTACT	1 cut(s)	1279
SchI	GAGTC	1 cut(s)	125
ScrFI	CCNGG	5 cut(s)	24, 462, 1108, 1152, 1431
SduI	GDGCHC	1 cut(s)	788
SfaNI	GCATC	3 cut(s)	468, 699, 739
SfoI	GGCGCC	1 cut(s)	217
Sfr274I	CTCGAG	1 cut(s)	442
SgrAI	CRCCGGYG	1 cut(s)	110
SinI	GGWCC	1 cut(s)	604
SlaI	CTCGAG	1 cut(s)	442
SmiMI	CAYNNNNRTG	2 cut(s)	44, 720
SmlI	CTYRAG	2 cut(s)	442, 806
SmoI	CTYRAG	2 cut(s)	442, 806
Sse9I	AATT	8 cut(s)	658, 700, 769, 831, 840, 1264, 1331, 1368
SseBI	AGGCCT	1 cut(s)	448
SspDI	GGCGCC	1 cut(s)	215
SspMI	CTAG	1 cut(s)	957
StuI	AGGCCT	1 cut(s)	448
StyD4I	CCNGG	5 cut(s)	22, 460, 1106, 1150, 1429
TaaI	ACNGT	4 cut(s)	16, 81, 106, 1065
TaiI	ACGT	4 cut(s)	99, 724, 951, 1022
TasI	AATT	8 cut(s)	658, 700, 769, 831, 840, 1264, 1331, 1368
TatI	WGTACW	3 cut(s)	258, 1065, 1277
TauI	GCSGC	5 cut(s)	200, 209, 528, 563, 715
TfiI	GAWTC	6 cut(s)	27, 160, 457, 1192, 1243, 1342
Tru1I	TTAA	3 cut(s)	147, 924, 1140
Tru9I	TTAA	3 cut(s)	147, 924, 1140
TscAI	CASTG	2 cut(s)	1475, 1526
TseFI	GTSAC	1 cut(s)	106
TseI	GCWGC	4 cut(s)	548, 663, 1093, 1103
Tsp45I	GTSAC	1 cut(s)	106
TspDTI	ATGAA	6 cut(s)	866, 1046, 1074, 1322, 1467, 1505
TspGWI	ACGGA	4 cut(s)	589, 891, 1158, 1343
TspRI	CASTG	2 cut(s)	1475, 1526
Tth111I	GACNNNGTC	2 cut(s)	419, 1126
Van91I	CCANNNNNTGG	1 cut(s)	1474
VpaK11BI	GGWCC	1 cut(s)	604
XagI	CCTNNNNNAGG	1 cut(s)	1111
XapI	RAATTY	2 cut(s)	769, 1331
XceI	RCATGY	1 cut(s)	259
XcmI	CCANNNNNNNNNTGG	1 cut(s)	855
XhoI	CTCGAG	1 cut(s)	442
XmiI	GTMKAC	1 cut(s)	387
XmnI	GAANNNNTTC	1 cut(s)	1295
XspI	CTAG	1 cut(s)	957
ZrmI	AGTACT	1 cut(s)	1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.