Rw6G008920

Cell Division

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0001165
Physical Location & Seq
Reverse (-)
15014649 .. 15017048
2400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G008920.1

Sequence Viewer

Length: 2349 bp
ATGTCGAACCAAGATGAGGGAACGAAGAAGGACTTCAGCACTGCCATTCTCAACCGCAAGAAGGCTCCAAATCGCCTCATTGTCGATGAAGCTGTGGTGGATGACAACTCCATCATCCAACTCCACCCGGCGACCATGGAGAAGCTCCAGCTCTTTCGTGGTGACACAGTCTTGATCAAAGGAAAGAAGAGAAGAGACACAATCTGTATTGCTCTTGCTGATGATACATGTGAGGAACCAAAGGTAAGGATGAACAAGGTTGTGAGGAACAACCTTAGGGTTAGGCTTGGTGATGTTGTTTCCATTCACCAATGCGCTGATGTTAAGTATGGAAAGCGTGTCCACATTCTCCCTATAGATGACACAATTGAAGGGATCACTGGAAATCTGAAAGGTGATCTTTTCCTAGTGAGAGGAGGAATGAGGAGTGTAGAGTTTAAGGTTATTGAGACTGACCCTCCTGAGTACTGTGTAGTTGCTCCGGACACCGAAATCTTCTGTGAGGGAGAACCTGTTAGAAGGGAGGATGAGGAAAGATTAGATGAGGTAGGGTATGATGATGTTGGTGGTGTTAGGAAACAGATGGCTCAGATTCGTGAATTGGTTGAGCTACCTCTGAGGCATCCTCAGCTGTTTAAATCAATCGGTGTCAAACCACCAAAGGGTATTCTTCTGTATGGTCCTCCTGGAACCGGCAAGACTTTAATTGCAAGAGCTGTTGCTAATGAAACCGGGGCATTCTTTTTCTGCATCAATGGACCAGAAATCATGTCCAAGATGGCTGGAGAGAGTGAGAGCAACCTCAGGAAAGCTTTTGAGGAAGCAGAGAAGAATGCGCCATCAATCATATTTATTGATGAGATTGATTCCATTGCTCCCAAGAGAGAGAAGACTCATGGTGAAGTTGAGAGGAGGATTGTTTCCCAGCTCTTGACTCTTATGGATGGACTAAAGTCCCGAGCACATGTCATTGTTATGGGGGCTACTAATCGTCCAAACAGTATTGACCCTGCTCTTAGGAGGTTTGGAAGATTTGATAGGGAAATAGATATTGGTGTTCCAGATGAAGTTGGGCGTCTTGAGGTCCTCCGCATTCATAGCAAGAACATGAAGCTTGCCGAAGATGTCGATTTAGAAAGAGTTGCCAAGGATACTCATGGGTATGTTGGTGCTGATCTAGCTGCTTTATCTACTGAGGCTGCACTTCAATGCATCCGAGAGAAGATGGATGTGATTGACTTGGAAGATGAGACAATAGATGCTGAGATACTCAACTCAATGGCAGTAACAAACGAACATTTCCAGACTGCTCTTGGAACAAGCAACCCTTCTGCTCTTCGTGAAACTGTTGTTGAAGTTCCCAATGTTACTTGGGATGCTATTGGAGGTCTTGAAAATGTTAAGAAAGAACTTCAAGAGACTGTTCAATATCCTGTTGAGCATCCAGAGAAATTTGAGAAATTCGGTATGTCACCCTCAAAGGGAGTTCTTTTCTATGGTCCTCCTGGATGCGGTAAAACTCTTCTGGCCAAGGCTATAGCTAATGAGTGTCAGGCTAACTTCATCAGTATCAAGGGACCTGAGTTGCTCACCATGTGGTTTGGAGAGAGTGAGGCCAATGTAAGAGAAATTTTTGACAAGGCTCGTGCATCTGCTCCATGTGTCCTCTTTTTTGATGAGCTCGATTCCATTGCTACTAAAAGAGGTAGTAATGTAGGTGATTCTGGAGGTGCTGATAGGGTTTTGAACCAACTCCTTACTGAAATGGATGGAGTGTCTGCCAAGAAAACTGTTTTCATTATTGGGGCCACCAACAGACCTGACATTATAGACCCTGCACTTCTTCGTCCAGGACGTCTGGATCAATTGCTTTACATTCCTCTCCCTGATGAAGAATCCCGCTATCAAATATTCAAGTCTTGCTTGAGGAAGTCTCCTGTTTCCAAGTATGTGGACCTCAAAGCTCTTGCCAAGCACACAGAAGGTTTCAGTGGTGCTGATATCACTGAAATATGCCAGCGTGCTTGCAAATATGCCATCAGAGACAACATTGAGAAAGATATTGAGAGGGAGAGGAGGAGAAGTGAGAATCCTGATGTTATAGAGGAGGATGACGATGAAGTATCAGAGATCACTGCAGCTCATTTTGAGGAATCAATGAAGTATGCTCGTAGGAGTGTTAGTGATGCTGATATCCGCAAGTACCAGGCATTTGCAACTACATTGCACCAGGCGAGAGGGTTTGGAGCAGATGAGTTCAGGTTCCCCAGTGGCTCCGGCGCTGCTGTTGGTTCTGATCCTTTTGCAACTACTACTGCTGGTGAAGCTGATGAAGACCTTTATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 ko05134 map04141 map05134
Pfam Domains
Protein Families
AAA CDC48_2 CDC48_N

Protein Analysis

782

Amino Acids

86.82

Weight (kDa)

5.12

Isoelectric Point (pI)

42.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC48_N PF02359 25 - 106 6.8e-22 Cell division protein 48 (CDC48), N-terminal domain
CDC48_2 PF02933 131 - 173 2.2e-06 Cell division protein 48 (CDC48), domain 2
RuvB_N PF05496 222 - 297 6.1e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 223 - 352 1.5e-48 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 375 - 416 4e-14 AAA+ lid domain
AAA PF00004 496 - 628 5.5e-47 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 651 - 689 2.3e-13 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1858
AccIII TCCGGA 1 cut(s) 481
AciI CCGC 5 cut(s) 55, 1090, 1512, 1900, 2197
AclWI GGATC 3 cut(s) 383, 1869, 2291
AcoI YGGCCR 1 cut(s) 1527
AcsI RAATTY 3 cut(s) 1451, 1460, 1629
AcuI CTGAAG 1 cut(s) 19
AcyI GRCGYC 2 cut(s) 1075, 1855
AdeI CACNNNGTG 1 cut(s) 1596
AfaI GTAC 2 cut(s) 467, 2204
AfiI CCNNNNNNNGG 6 cut(s) 16, 61, 662, 692, 1481, 1511
AflIII ACRYGT 2 cut(s) 227, 964
AgsI TTSAA 8 cut(s) 371, 1208, 1355, 1394, 1415, 1427, 1747, 1915
AjnI CCWGG 5 cut(s) 685, 1504, 1849, 2205, 2229
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
Alw21I GWGCWC 2 cut(s) 964, 1683
Alw26I GTCTC 6 cut(s) 189, 443, 1244, 1412, 1938, 2037
AlwI GGATC 3 cut(s) 383, 1869, 2291
Ama87I CYCGRG 1 cut(s) 957
Aor13HI TCCGGA 1 cut(s) 481
AoxI GGCC 3 cut(s) 1527, 1614, 1806
ApeKI GCWGC 4 cut(s) 1181, 1199, 2138, 2282
ApoI RAATTY 3 cut(s) 1451, 1460, 1629
Asp700I GAANNNNTTC 1 cut(s) 32
AspLEI GCGC 3 cut(s) 317, 838, 2282
AspS9I GGNCC 7 cut(s) 680, 758, 1084, 1499, 1577, 1806, 1954
AsuC2I CCSGG 2 cut(s) 128, 733
AsuHPI GGTGA 9 cut(s) 173, 299, 302, 407, 911, 1464, 1582, 1730, 2333
AvaI CYCGRG 1 cut(s) 957
AvaII GGWCC 6 cut(s) 680, 758, 1084, 1499, 1577, 1954
AxyI CCTNAGG 2 cut(s) 275, 803
BalI TGGCCA 1 cut(s) 1529
BanII GRGCYC 1 cut(s) 1683
BauI CACGAG 1 cut(s) 1644
BbsI GAAGAC 2 cut(s) 896, 2340
Bbv12I GWGCWC 2 cut(s) 964, 1683
BbvCI CCTCAGC 1 cut(s) 627
BbvI GCAGC 4 cut(s) 1168, 1186, 2150, 2269
BccI CCATC 8 cut(s) 119, 577, 772, 847, 938, 1219, 1763, 2045
BcgI CGANNNNNNTGC 2 cut(s) 1673, 1707
BciT130I CCWGG 5 cut(s) 687, 1506, 1851, 2207, 2231
BciVI GTATCC 1 cut(s) 1144
BclI TGATCA 1 cut(s) 174
BcnI CCSGG 2 cut(s) 128, 733
BcoDI GTCTC 6 cut(s) 189, 443, 1244, 1412, 1938, 2037
BfaI CTAG 2 cut(s) 407, 1178
BfmI CTRYAG 3 cut(s) 354, 1536, 2136
BfoI RGCGCY 1 cut(s) 2283
BfuI GTATCC 1 cut(s) 1144
BisI GCNGC 4 cut(s) 1182, 1200, 2139, 2283
BlsI GCNGC 4 cut(s) 1183, 1201, 2140, 2284
BmcAI AGTACT 1 cut(s) 467
Bme1390I CCNGG 7 cut(s) 128, 687, 733, 1506, 1851, 2207, 2231
Bme18I GGWCC 6 cut(s) 680, 758, 1084, 1499, 1577, 1954
BmeT110I CYCGRG 1 cut(s) 957
BmgT120I GGNCC 7 cut(s) 680, 758, 1084, 1499, 1577, 1806, 1954
BmiI GGNNCC 7 cut(s) 66, 237, 691, 1578, 1807, 2264, 2275
BmrFI CCNGG 7 cut(s) 128, 687, 733, 1506, 1851, 2207, 2231
BmrI ACTGGG 1 cut(s) 2262
BmsI GCATC 9 cut(s) 631, 759, 1221, 1249, 1366, 1450, 1499, 1658, 2176
BmuI ACTGGG 1 cut(s) 2262
BoxI GACNNNNGTC 1 cut(s) 952
BpiI GAAGAC 2 cut(s) 896, 2340
BplI GAGNNNNNCTC 4 cut(s) 610, 642, 1918, 1950
BpmI CTGGAG 3 cut(s) 131, 804, 1746
Bpu10I CCTNAGC 1 cut(s) 627
BpuEI CTTGAG 2 cut(s) 1100, 1945
BpuMI CCSGG 2 cut(s) 128, 733
BsaHI GRCGYC 2 cut(s) 1075, 1855
BsaJI CCNNGG 4 cut(s) 135, 732, 1146, 1530
BsaWI WCCGGW 1 cut(s) 481
BsaXI ACNNNNNCTCC 8 cut(s) 442, 472, 498, 528, 2068, 2098, 2167, 2197
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 61, 662, 692, 1481, 1511
Bse118I RCCGGY 1 cut(s) 692
Bse1I ACTGG 2 cut(s) 385, 2268
Bse21I CCTNAGG 2 cut(s) 275, 803
Bse3DI GCAATG 3 cut(s) 870, 1689, 2222
BseAI TCCGGA 1 cut(s) 481
BseBI CCWGG 5 cut(s) 687, 1506, 1851, 2207, 2231
BseDI CCNNGG 4 cut(s) 135, 732, 1146, 1530
BseLI CCNNNNNNNGG 6 cut(s) 16, 61, 662, 692, 1481, 1511
BseMI GCAATG 3 cut(s) 870, 1689, 2222
BseMII CTCAG 8 cut(s) 453, 602, 608, 641, 817, 1185, 1254, 1572
BseNI ACTGG 2 cut(s) 385, 2268
BseRI GAGGAG 6 cut(s) 429, 439, 925, 2089, 2092, 2120
BseXI GCAGC 4 cut(s) 1168, 1186, 2150, 2269
BseYI CCCAGC 1 cut(s) 924
BsgI GTGCAG 2 cut(s) 1185, 1821
BshFI GGCC 3 cut(s) 1529, 1616, 1808
BsiHKAI GWGCWC 2 cut(s) 964, 1683
BsiHKCI CYCGRG 1 cut(s) 957
BsiSI CCGG 5 cut(s) 128, 482, 693, 732, 2277
BslFI GGGAC 2 cut(s) 940, 1590
BslI CCNNNNNNNGG 6 cut(s) 16, 61, 662, 692, 1481, 1511
BsmAI GTCTC 6 cut(s) 189, 443, 1244, 1412, 1938, 2037
BsmFI GGGAC 2 cut(s) 940, 1590
BsmI GAATGC 3 cut(s) 737, 838, 1092
BsnI GGCC 3 cut(s) 1529, 1616, 1808
BsoBI CYCGRG 1 cut(s) 957
Bsp1286I GDGCHC 2 cut(s) 964, 1683
Bsp13I TCCGGA 1 cut(s) 481
Bsp143I GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 5 cut(s) 55, 1090, 1512, 1900, 2197
BspANI GGCC 3 cut(s) 1529, 1616, 1808
BspCNI CTCAG 8 cut(s) 454, 601, 609, 640, 816, 1186, 1255, 1573
BspEI TCCGGA 1 cut(s) 481
BspLI GGNNCC 7 cut(s) 66, 237, 691, 1578, 1807, 2264, 2275
BspMAI CTGCAG 1 cut(s) 2140
BspPI GGATC 3 cut(s) 383, 1869, 2291
BspQI GCTCTTC 1 cut(s) 1341
BsrDI GCAATG 3 cut(s) 870, 1689, 2222
BsrFI RCCGGY 1 cut(s) 692
BsrI ACTGG 2 cut(s) 385, 2268
BssAI RCCGGY 1 cut(s) 692
BssECI CCNNGG 4 cut(s) 135, 732, 1146, 1530
BssMI GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
BssNI GRCGYC 2 cut(s) 1075, 1855
BssSI CACGAG 1 cut(s) 1644
BssT1I CCWWGG 3 cut(s) 135, 1146, 1530
Bst2BI CACGAG 1 cut(s) 1644
Bst2UI CCWGG 5 cut(s) 687, 1506, 1851, 2207, 2231
Bst4CI ACNGT 6 cut(s) 169, 470, 1001, 1348, 1423, 1792
Bst6I CTCTTC 4 cut(s) 182, 187, 1341, 1527
BstACI GRCGYC 2 cut(s) 1075, 1855
BstC8I GCNNGC 4 cut(s) 1116, 2018, 2022, 2026
BstDSI CCRYGG 1 cut(s) 135
BstH2I RGCGCY 1 cut(s) 2283
BstHHI GCGC 3 cut(s) 317, 838, 2282
BstKTI GATC 7 cut(s) 177, 378, 400, 1177, 1864, 2133, 2299
BstMAI GTCTC 6 cut(s) 189, 443, 1244, 1412, 1938, 2037
BstMBI GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
BstMWI GCNNNNNNNGC 4 cut(s) 628, 1098, 1178, 2324
BstNI CCWGG 5 cut(s) 687, 1506, 1851, 2207, 2231
BstNSI RCATGY 2 cut(s) 231, 968
BstPAI GACNNNNGTC 1 cut(s) 952
BstSCI CCNGG 7 cut(s) 126, 685, 731, 1504, 1849, 2205, 2229
BstSFI CTRYAG 3 cut(s) 354, 1536, 2136
BstV1I GCAGC 4 cut(s) 1168, 1186, 2150, 2269
BstV2I GAAGAC 2 cut(s) 896, 2340
BstXI CCANNNNNNTGG 1 cut(s) 1951
Bsu36I CCTNAGG 2 cut(s) 275, 803
BsuI GTATCC 1 cut(s) 1144
BsuRI GGCC 3 cut(s) 1529, 1616, 1808
BtgI CCRYGG 1 cut(s) 135
BtsI GCAGTG 2 cut(s) 39, 2133
BtsIMutI CAGTG 6 cut(s) 39, 378, 1996, 2004, 2133, 2275
Cac8I GCNNGC 4 cut(s) 1116, 2018, 2022, 2026
CfoI GCGC 3 cut(s) 317, 838, 2282
Cfr10I RCCGGY 1 cut(s) 692
Cfr13I GGNCC 7 cut(s) 680, 758, 1084, 1499, 1577, 1806, 1954
CseI GACGC 1 cut(s) 1064
Csp6I GTAC 2 cut(s) 466, 2203
CviAII CATG 9 cut(s) 136, 228, 769, 896, 965, 1108, 1157, 1594, 1659
CviQI GTAC 2 cut(s) 466, 2203
DpnI GATC 7 cut(s) 176, 377, 399, 1176, 1863, 2132, 2298
DpnII GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
DraI TTTAAA 1 cut(s) 637
DraIII CACNNNGTG 1 cut(s) 1596
EaeI YGGCCR 1 cut(s) 1527
Eam1104I CTCTTC 4 cut(s) 182, 187, 1341, 1527
EarI CTCTTC 4 cut(s) 182, 187, 1341, 1527
Ecl136II GAGCTC 1 cut(s) 1681
Eco130I CCWWGG 3 cut(s) 135, 1146, 1530
Eco24I GRGCYC 1 cut(s) 1683
Eco32I GATATC 2 cut(s) 2002, 2194
Eco47I GGWCC 6 cut(s) 680, 758, 1084, 1499, 1577, 1954
Eco53kI GAGCTC 1 cut(s) 1681
Eco57I CTGAAG 1 cut(s) 19
Eco81I CCTNAGG 2 cut(s) 275, 803
Eco88I CYCGRG 1 cut(s) 957
EcoICRI GAGCTC 1 cut(s) 1681
EcoO109I RGGNCCY 2 cut(s) 1084, 1577
EcoRII CCWGG 5 cut(s) 685, 1504, 1849, 2205, 2229
EcoRV GATATC 2 cut(s) 2002, 2194
EcoT14I CCWWGG 3 cut(s) 135, 1146, 1530
EcoT22I ATGCAT 1 cut(s) 1214
EcoT38I GRGCYC 1 cut(s) 1683
ErhI CCWWGG 3 cut(s) 135, 1146, 1530
FaeI CATG 9 cut(s) 139, 231, 772, 899, 968, 1111, 1160, 1597, 1662
FalI AAGNNNNNCTT 8 cut(s) 17, 49, 384, 416, 1312, 1344, 1907, 1939
FaqI GGGAC 2 cut(s) 940, 1590
FatI CATG 9 cut(s) 135, 227, 768, 895, 964, 1107, 1156, 1593, 1658
FauI CCCGC 1 cut(s) 1907
FbaI TGATCA 1 cut(s) 174
Fnu4HI GCNGC 4 cut(s) 1182, 1200, 2139, 2283
FriOI GRGCYC 1 cut(s) 1683
Fsp4HI GCNGC 4 cut(s) 1182, 1200, 2139, 2283
FspBI CTAG 2 cut(s) 407, 1178
GlaI GCGC 3 cut(s) 316, 837, 2281
GluI GCNGC 4 cut(s) 1182, 1200, 2139, 2283
GsaI CCCAGC 1 cut(s) 928
GsuI CTGGAG 3 cut(s) 131, 804, 1746
HaeII RGCGCY 1 cut(s) 2283
HaeIII GGCC 3 cut(s) 1529, 1616, 1808
HapII CCGG 5 cut(s) 128, 482, 693, 732, 2277
HgaI GACGC 1 cut(s) 1064
HhaI GCGC 3 cut(s) 317, 838, 2282
Hin1I GRCGYC 2 cut(s) 1075, 1855
Hin1II CATG 9 cut(s) 139, 231, 772, 899, 968, 1111, 1160, 1597, 1662
Hin6I GCGC 3 cut(s) 315, 836, 2280
HinP1I GCGC 3 cut(s) 315, 836, 2280
HindIII AAGCTT 2 cut(s) 810, 1112
HinfI GANTC 9 cut(s) 592, 866, 892, 934, 1685, 1721, 1895, 2089, 2153
HpaII CCGG 5 cut(s) 128, 482, 693, 732, 2277
HphI GGTGA 9 cut(s) 173, 299, 302, 407, 911, 1464, 1582, 1730, 2333
Hpy166II GTNNAC 2 cut(s) 343, 1954
Hpy188I TCNGA 7 cut(s) 390, 591, 618, 1217, 2042, 2128, 2296
Hpy8I GTNNAC 2 cut(s) 343, 1954
HpyAV CCTTC 6 cut(s) 22, 55, 365, 513, 1338, 1976
HpyCH4III ACNGT 6 cut(s) 169, 470, 1001, 1348, 1423, 1792
HpyCH4IV ACGT 1 cut(s) 1855
HpyF10VI GCNNNNNNNGC 4 cut(s) 628, 1098, 1178, 2324
HpySE526I ACGT 1 cut(s) 1855
Hsp92I GRCGYC 2 cut(s) 1075, 1855
Hsp92II CATG 9 cut(s) 139, 231, 772, 899, 968, 1111, 1160, 1597, 1662
HspAI GCGC 3 cut(s) 315, 836, 2280
Kpn2I TCCGGA 1 cut(s) 481
Ksp22I TGATCA 1 cut(s) 174
Kzo9I GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
LguI GCTCTTC 1 cut(s) 1341
LmnI GCTCC 7 cut(s) 70, 150, 484, 880, 1660, 2246, 2279
Lsp1109I GCAGC 4 cut(s) 1168, 1186, 2150, 2269
LweI GCATC 9 cut(s) 631, 759, 1221, 1249, 1366, 1450, 1499, 1658, 2176
MaeI CTAG 2 cut(s) 407, 1178
MaeII ACGT 1 cut(s) 1855
MaeIII GTNAC 4 cut(s) 161, 1285, 1366, 1470
MalI GATC 7 cut(s) 176, 377, 399, 1176, 1863, 2132, 2298
MboI GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
MfeI CAATTG 2 cut(s) 366, 1865
MhlI GDGCHC 2 cut(s) 964, 1683
MlsI TGGCCA 1 cut(s) 1529
MluCI AATT 7 cut(s) 366, 599, 705, 1451, 1460, 1629, 1865
MluNI TGGCCA 1 cut(s) 1529
MlyI GAGTC 2 cut(s) 886, 928
MmeI TCCRAC 1 cut(s) 142
Mox20I TGGCCA 1 cut(s) 1529
Mph1103I ATGCAT 1 cut(s) 1214
MroI TCCGGA 1 cut(s) 481
MroXI GAANNNNTTC 1 cut(s) 32
MscI TGGCCA 1 cut(s) 1529
MseI TTAA 5 cut(s) 324, 438, 636, 704, 1401
MslI CAYNNNNRTG 3 cut(s) 974, 1161, 1207
Msp20I TGGCCA 1 cut(s) 1529
MspA1I CMGCKG 1 cut(s) 631
MspI CCGG 5 cut(s) 128, 482, 693, 732, 2277
MspR9I CCNGG 7 cut(s) 128, 687, 733, 1506, 1851, 2207, 2231
MunI CAATTG 2 cut(s) 366, 1865
Mva1269I GAATGC 3 cut(s) 737, 838, 1092
MvaI CCWGG 5 cut(s) 687, 1506, 1851, 2207, 2231
MwoI GCNNNNNNNGC 4 cut(s) 628, 1098, 1178, 2324
NciI CCSGG 2 cut(s) 128, 733
NcoI CCATGG 1 cut(s) 135
NdeII GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
NlaIII CATG 9 cut(s) 139, 231, 772, 899, 968, 1111, 1160, 1597, 1662
NlaIV GGNNCC 7 cut(s) 66, 237, 691, 1578, 1807, 2264, 2275
NmuCI GTSAC 2 cut(s) 161, 1470
NsiI ATGCAT 1 cut(s) 1214
NspI RCATGY 2 cut(s) 231, 968
PciI ACATGT 2 cut(s) 227, 964
PciSI GCTCTTC 1 cut(s) 1341
PcsI WCGNNNNNNNCGW 1 cut(s) 1852
PctI GAATGC 3 cut(s) 737, 838, 1092
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 7 cut(s) 592, 866, 1685, 1721, 1895, 2089, 2153
PflFI GACNNNGTC 1 cut(s) 167
PfoI TCCNGGA 3 cut(s) 685, 1504, 1849
PkrI GCNGC 4 cut(s) 1183, 1201, 2140, 2284
PleI GAGTC 2 cut(s) 886, 928
PpsI GAGTC 2 cut(s) 886, 928
PpuMI RGGWCCY 2 cut(s) 1084, 1577
PscI ACATGT 2 cut(s) 227, 964
PshAI GACNNNNGTC 1 cut(s) 952
Psp124BI GAGCTC 1 cut(s) 1683
Psp5II RGGWCCY 2 cut(s) 1084, 1577
Psp6I CCWGG 5 cut(s) 685, 1504, 1849, 2205, 2229
PspFI CCCAGC 1 cut(s) 924
PspGI CCWGG 5 cut(s) 685, 1504, 1849, 2205, 2229
PspN4I GGNNCC 7 cut(s) 66, 237, 691, 1578, 1807, 2264, 2275
PspPI GGNCC 7 cut(s) 680, 758, 1084, 1499, 1577, 1806, 1954
PspPPI RGGWCCY 2 cut(s) 1084, 1577
PstI CTGCAG 1 cut(s) 2140
PsyI GACNNNGTC 1 cut(s) 167
PvuII CAGCTG 1 cut(s) 631
RsaI GTAC 2 cut(s) 467, 2204
RsaNI GTAC 2 cut(s) 466, 2203
RseI CAYNNNNRTG 3 cut(s) 974, 1161, 1207
SacI GAGCTC 1 cut(s) 1683
SapI GCTCTTC 1 cut(s) 1341
SaqAI TTAA 5 cut(s) 324, 438, 636, 704, 1401
SatI GCNGC 4 cut(s) 1182, 1200, 2139, 2283
Sau3AI GATC 7 cut(s) 174, 375, 397, 1174, 1861, 2130, 2296
Sau96I GGNCC 7 cut(s) 680, 758, 1084, 1499, 1577, 1806, 1954
ScaI AGTACT 1 cut(s) 467
SchI GAGTC 2 cut(s) 886, 928
ScrFI CCNGG 7 cut(s) 128, 687, 733, 1506, 1851, 2207, 2231
SduI GDGCHC 2 cut(s) 964, 1683
SfaNI GCATC 9 cut(s) 631, 759, 1221, 1249, 1366, 1450, 1499, 1658, 2176
SfcI CTRYAG 3 cut(s) 354, 1536, 2136
SinI GGWCC 6 cut(s) 680, 758, 1084, 1499, 1577, 1954
SmiMI CAYNNNNRTG 3 cut(s) 974, 1161, 1207
SmlI CTYRAG 2 cut(s) 1079, 1924
SmoI CTYRAG 2 cut(s) 1079, 1924
Sse9I AATT 7 cut(s) 366, 599, 705, 1451, 1460, 1629, 1865
SsiI CCGC 5 cut(s) 55, 1090, 1512, 1900, 2197
SspI AATATT 1 cut(s) 1911
SspMI CTAG 2 cut(s) 407, 1178
SstI GAGCTC 1 cut(s) 1683
StyD4I CCNGG 7 cut(s) 126, 685, 731, 1504, 1849, 2205, 2229
StyI CCWWGG 3 cut(s) 135, 1146, 1530
TaaI ACNGT 6 cut(s) 169, 470, 1001, 1348, 1423, 1792
TaiI ACGT 1 cut(s) 1858
TaqI TCGA 4 cut(s) 5, 84, 1128, 1683
TasI AATT 7 cut(s) 366, 599, 705, 1451, 1460, 1629, 1865
TatI WGTACW 1 cut(s) 465
TfiI GAWTC 7 cut(s) 592, 866, 1685, 1721, 1895, 2089, 2153
Tru1I TTAA 5 cut(s) 324, 438, 636, 704, 1401
Tru9I TTAA 5 cut(s) 324, 438, 636, 704, 1401
TscAI CASTG 6 cut(s) 46, 385, 1996, 2011, 2140, 2275
TseFI GTSAC 2 cut(s) 161, 1470
TseI GCWGC 4 cut(s) 1181, 1199, 2138, 2282
Tsp45I GTSAC 2 cut(s) 161, 1470
TspRI CASTG 6 cut(s) 46, 385, 1996, 2011, 2140, 2275
Tth111I GACNNNGTC 1 cut(s) 167
VpaK11BI GGWCC 6 cut(s) 680, 758, 1084, 1499, 1577, 1954
XapI RAATTY 3 cut(s) 1451, 1460, 1629
XceI RCATGY 2 cut(s) 231, 968
XcmI CCANNNNNNNNNTGG 2 cut(s) 155, 1310
XmnI GAANNNNTTC 1 cut(s) 32
XspI CTAG 2 cut(s) 407, 1178
ZraI GACGTC 1 cut(s) 1856
ZrmI AGTACT 1 cut(s) 467
Zsp2I ATGCAT 1 cut(s) 1214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.