Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0001165

Physical Location & Seq

Genomic Coordinates Reverse (-)

15513027 .. 15515784

Gene Structure 2758 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G237600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGACCAACAAAGCTGATCAATCTTCGGACACTGGGGGTTCAAAGAAGGACTTCACTACGGCAATCCTTGACCGCAAGAAGGCTGTGAATCGCCTTGTTGTGGATGAAGATATCCATGGCGACAACTCTGTCGTCACGCTCCACCCAGAGTCTATGGAGAGGCTCCAGCTATTTCGTGGGGACACAATCTTGATCAAGGGAAAGAAAAGGAAGGACACAGTCTGCATTGTAGTTGCTGATGACAAATGTGAGGAACCAAAGATAAGGATGAACAAGGTTGTCAGGAGCAACCTACGGGTTAGGCTTGGAGATGTCGTTTCTGTTTACCAATGCGCTGATGTCAAGTATGGAAACCGTGTTCACGTACTCCCTGTGGATGACAGTATCCAAGGGGTGACTGGAAATCTGTTTGATACATATTTGAGACCTTATTTTTTCGAGGCCTACCGACCCGTGAGGACGGGTGATCTCTTCCTTGTGAGAGGAGGGATGAGGAGTGTGGAGTTCAAGGTTGTCGAAACTGACCCTCCTGAGTACTGCGTGGTGGCTCCCGACACCGAAATCTTCTGTGACGGGGAGCCTGTGAGAAGGGAGGATGAGGAGAGGTCATTAGATGAGGTTGGATATGATGATGTTGGTGGAGTAAGGAAACAGATGGCTCAAATTCGCGAGTCGGTGGAGCTGCCGCTGAGGCATCCTCAGCTGTTTAAGATAATTGGTGTGAAACCACCAAAGGGTATTCTGTTGTATGGACCTCCTGGAACTGGTAAGACTCTAATTGCCCGTGCTGTGGCTAATGAGACTGGGGCATTCTTTTTCTGCATCAATGGACCAGAAATCATGTCGAAACTGGCTGGGGAGAGTGAAAGCAACCTCAGGAAAGCTTTTCAGGAAGCAGAGAAGAACGCACCATCAATCATCTTTATTGATGAGATCGATTCAATTGCTCCCAAGAGAGACAAGACAAATGGAGAAGTTGAGAGGAGGATTGTTTCCCAACTCTTGACACTCATGGATGGACTAAAATCCCGTGCGCATGTAATTGTTATCGGGGCTACAAATCGTCCAAATAGCATTGATCCAGCTCTCAGAAGGTTTGGAAGATTTGATAGGGAAATAGATATTGGTGTGCCAGATGAAGTTGGGCGTCTTGAGGTTCTGCGTATTCATACCAGGAACATGAAGCTTGCTGAAGAAGTTAATTTAGAAAAGATAGCTAAGGACACACATGGTTATGTTGGTGCTGATCTAGCTGCTTTGTGTACTGAGGCTGCACTTCAATGCATCAGAGAGAAGATGGACGTGATTGACTTAGAAGATGAGGAAATAGATGCCGAGATACTTAATTCAATGGCAGTTACAAACGAGCACTTGCAGACGGCTCTTGGCACGAGCAACCCATCCGCTCTTCGTGAAACAGTTGTTGAGGTGCCGAATGTTAGTTGGAAAGATATCGGAGGTCTCGAGAATGTCAAGAGGGAACTTCAAGAGACGGTTCAATATCCAGTGGAGCATCCTGAGAAATTTGAGAAATTTGGAATGTCACCCTCAAAGGGAGTTCTTTTCTATGGCCCTCCTGGATGTGGTAAAACTCTTCTCGCCAAAGCTATTGCCAATGAGTGTCAAGCAAACTTCATCAGTGTCAAGGGACCTGAATTGCTTACAATGTGGTTTGGAGAGAGTGAGGCCAATGTACGTGAAATTTTCGACAAGGCCCGTGGATCTGCTCCATGTGTCCTGTTCTTTGATGAACTTGATTCCATTGCTACACAGAGAGGTAGCAGCGTAGGCGATGCTGGGGGTGCTGCTGATAGGGTACTGAACCAACTCCTTACGGAAATGGATGGAATGTCTGCAAAGAAAACTGTTTTCGTCATTGGGGCCACCAACAGACCTGACATTATAGACCCTGCACTTCTACGTCCAGGCCGTCTGGATCAGTTGATTTACATCCCTCTCCCTGACGAAGAATCTCGCCATCAAATATTCAGGTCTTGCTTGAGGAAATCTCCTGTTTCCAAAGATGTGGACATTAGAGCCCTTGCCAAGTACACCCTAGGATTTAGTGGTGCTGATATAACAGAAATATGCCAGCGTGCGTGCAAATATGCCATTAGAGAAAACATTGAGAAGGATATTGTGAGGGATAGGAGGAAAAATGAGAACCCTGAGGCTATGGAGGAGGATGTTGATGATGAAGTAGCAGAGATCATGGCAGCTCATTTCGAGGAATCCATGAAGTATGCTCGTAGGAGTGTTAGTGATGCTGATATCCGTAAATACCAGACATTTTCTCAGACATTGCAGCAGTCAAGAGGGTTGGGAACAGAATTCAGGTTTGCAGACAGAGCTGCTGGATATGACCCTTCTGCAACTGCGTCTGCTGGGGCTGATGGAGATGACTTATACAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010038 GO:0010604 GO:0012505 GO:0016020 GO:0019222 GO:0031974 GO:0031981 GO:0042176 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046686 GO:0048518 GO:0050789 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko04141 ko05134 map04141 map05134

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

805

Amino Acids

89.41

Weight (kDa)

5.2

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53230
fragaria_vesca	FvH4_2g06940 FvH4_2g06950 FvH4_2g07260 FvH4_4g17680 FvH4_6g16220 FvH4_6g16220
malus_domestica	MD03G1125700.v1.1 MD04G1094400.v1.1 MD11G1142500.v1.1 MD12G1114300.v1.1 MD17G1225300.v1.1 MD17G1225400.v1.1 MD17G1225600.v1.1 MD17G1228800.v1.1
prunus_persica	Prupe.4G237600_v2.0.a1 Prupe.6G107800_v2.0.a1 Prupe.6G233700_v2.0.a1 Prupe.6G233700_v2.0.a1
pyrus_communis	pycom04g08940 pycom04g08950 pycom09g14580 pycom11g11820 pycom12g11360
rosa_chinensis	RchiOBHm_Chr3g0470061 RchiOBHm_Chr4g0421621 RchiOBHm_Chr6g0259281 RchiOBHm_Chr6g0259871
rosa_laevigata	RLG00000007663 RLG00000014503 RLG00000014543 RLG00000024300
rosa_multiflora	Rmu_co8522155.1_g000003 Rmu_sc0005600.1_g000001 Rmu_sc0009049.1_g000005 Rmu_sc0011974.1_g000005 Rmu_sc0033604.1_g000001 Rmu_sc0033605.1_g000001 Rmu_ssc0000050.1_g000089
rosa_roxburghii	Rroxscaffold_5G00363870 Rroxscaffold_6G00411220
rosa_rugosa	Rorug03G0106600 Rorug04G0173900 Rorug05G0586800 Rorug05G0590900
rosa_samantha	Rh3AG155800 Rh4CG248200 Rh6AG103300 Rh6AG103400 Rh6AG107600 Rh6BG095700 Rh6CG092600 Rh6CG096400
rosa_wichuraiana	Rw3G014670 Rw4G020040 Rw6G008920 Rw6G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	128
Acc16I	TGCGCA	1 cut(s)	1035
AccB1I	GGYRCC	1 cut(s)	1429
AccBSI	CCGCTC	1 cut(s)	1406
AccII	CGCG	1 cut(s)	669
AciI	CCGC	3 cut(s)	73, 686, 1404
AclWI	GGATC	3 cut(s)	1073, 1729, 1944
AcsI	RAATTY	5 cut(s)	663, 1523, 1532, 1701, 2330
AcuI	CTGAAG	1 cut(s)	1212
AcyI	GRCGYC	1 cut(s)	1147
AfaI	GTAC	6 cut(s)	366, 536, 1264, 1695, 1818, 2051
AfiI	CCNNNNNNNGG	7 cut(s)	79, 100, 734, 764, 790, 1553, 1583
AgsI	TTSAA	7 cut(s)	42, 508, 942, 1280, 1350, 1487, 1499
AjiI	CACGTC	1 cut(s)	1303
AjnI	CCWGG	4 cut(s)	757, 1172, 1576, 1924
AjuI	GAANNNNNNNTTGG	2 cut(s)	1107, 1139
AloI	GAACNNNNNNTCC	2 cut(s)	342, 374
Alw21I	GWGCWC	1 cut(s)	1371
Alw26I	GTCTC	5 cut(s)	418, 794, 951, 1466, 1484
AlwI	GGATC	3 cut(s)	1073, 1729, 1944
Ama87I	CYCGRG	1 cut(s)	1463
AoxI	GGCC	6 cut(s)	441, 1570, 1686, 1713, 1881, 1927
ApeKI	GCWGC	8 cut(s)	682, 1253, 1271, 1782, 1805, 2216, 2305, 2351
ApoI	RAATTY	5 cut(s)	663, 1523, 1532, 1701, 2330
Asp700I	GAANNNNTTC	1 cut(s)	50
AspA2I	CCTAGG	1 cut(s)	2056
AspLEI	GCGC	2 cut(s)	335, 1036
AspS9I	GGNCC	6 cut(s)	752, 830, 1571, 1649, 1714, 1881
AsuHPI	GGTGA	3 cut(s)	406, 476, 1536
AvaI	CYCGRG	1 cut(s)	1463
AvaII	GGWCC	3 cut(s)	752, 830, 1649
AvrII	CCTAGG	1 cut(s)	2056
AxyI	CCTNAGG	2 cut(s)	875, 2169
BanI	GGYRCC	1 cut(s)	1429
BanII	GRGCYC	1 cut(s)	2041
BauI	CACGAG	1 cut(s)	1390
Bbv12I	GWGCWC	1 cut(s)	1371
BbvCI	CCTCAGC	2 cut(s)	689, 699
BbvI	GCAGC	8 cut(s)	669, 1240, 1258, 1792, 1794, 2228, 2317, 2338
BccI	CCATC	8 cut(s)	649, 919, 1010, 1291, 1408, 1838, 1986, 2387
BceAI	ACGGC	3 cut(s)	75, 1395, 1914
BcgI	CGANNNNNNTGC	2 cut(s)	926, 960
BciT130I	CCWGG	4 cut(s)	759, 1174, 1578, 1926
BciVI	GTATCC	1 cut(s)	395
BclI	TGATCA	2 cut(s)	16, 192
BcoDI	GTCTC	5 cut(s)	418, 794, 951, 1466, 1484
BfaI	CTAG	2 cut(s)	1250, 2057
BfuI	GTATCC	1 cut(s)	395
BglI	GCCNNNNNGGC	1 cut(s)	691
BisI	GCNGC	9 cut(s)	683, 686, 1254, 1272, 1783, 1806, 2217, 2306, 2352
BlnI	CCTAGG	1 cut(s)	2056
BlsI	GCNGC	9 cut(s)	684, 687, 1255, 1273, 1784, 1807, 2218, 2307, 2353
BmcAI	AGTACT	1 cut(s)	536
Bme1390I	CCNGG	4 cut(s)	759, 1174, 1578, 1926
Bme18I	GGWCC	3 cut(s)	752, 830, 1649
BmeT110I	CYCGRG	1 cut(s)	1463
BmgBI	CACGTC	1 cut(s)	1303
BmgT120I	GGNCC	6 cut(s)	752, 830, 1571, 1649, 1714, 1881
BmiI	GGNNCC	7 cut(s)	164, 255, 549, 579, 1431, 1650, 1882
BmrFI	CCNGG	4 cut(s)	759, 1174, 1578, 1926
BmrI	ACTGGG	2 cut(s)	42, 813
BmsI	GCATC	7 cut(s)	703, 831, 1293, 1321, 1522, 1783, 2254
BmuI	ACTGGG	2 cut(s)	42, 813
BplI	GAGNNNNNCTC	4 cut(s)	682, 714, 1993, 2025
BpmI	CTGGAG	1 cut(s)	149
Bpu10I	CCTNAGC	3 cut(s)	689, 699, 1218
BpuEI	CTTGAG	2 cut(s)	1172, 2020
Bsa29I	ATCGAT	1 cut(s)	936
BsaAI	YACGTR	2 cut(s)	364, 1697
BsaBI	GATNNNNATC	1 cut(s)	1949
BsaHI	GRCGYC	1 cut(s)	1147
BsaI	GGTCTC	2 cut(s)	418, 1466
BsaJI	CCNNGG	4 cut(s)	115, 388, 1717, 2056
BsaXI	ACNNNNNCTCC	6 cut(s)	300, 330, 511, 541, 2245, 2275
Bsc4I	CCNNNNNNNGG	7 cut(s)	79, 100, 734, 764, 790, 1553, 1583
Bse1I	ACTGG	6 cut(s)	37, 403, 769, 808, 855, 1505
Bse21I	CCTNAGG	2 cut(s)	875, 2169
Bse3DI	GCAATG	2 cut(s)	1761, 2300
Bse8I	GATNNNNATC	1 cut(s)	1949
BseBI	CCWGG	4 cut(s)	759, 1174, 1578, 1926
BseCI	ATCGAT	1 cut(s)	936
BseDI	CCNNGG	4 cut(s)	115, 388, 1717, 2056
BseJI	GATNNNNATC	1 cut(s)	1949
BseLI	CCNNNNNNNGG	7 cut(s)	79, 100, 734, 764, 790, 1553, 1583
BseMI	GCAATG	2 cut(s)	1761, 2300
BseMII	CTCAG	9 cut(s)	522, 680, 713, 889, 1102, 1257, 1509, 2160, 2309
BseNI	ACTGG	6 cut(s)	37, 403, 769, 808, 855, 1505
BseRI	GAGGAG	5 cut(s)	498, 508, 614, 997, 2195
BseXI	GCAGC	8 cut(s)	669, 1240, 1258, 1792, 1794, 2228, 2317, 2338
BseYI	CCCAGC	3 cut(s)	854, 1796, 2384
BsgI	GTGCAG	2 cut(s)	1257, 1896
Bsh1236I	CGCG	1 cut(s)	669
BshFI	GGCC	6 cut(s)	443, 1572, 1688, 1715, 1883, 1929
BshNI	GGYRCC	1 cut(s)	1429
BshVI	ATCGAT	1 cut(s)	936
BsiHKAI	GWGCWC	1 cut(s)	1371
BsiHKCI	CYCGRG	1 cut(s)	1463
BslFI	GGGAC	2 cut(s)	194, 1662
BslI	CCNNNNNNNGG	7 cut(s)	79, 100, 734, 764, 790, 1553, 1583
BsmAI	GTCTC	5 cut(s)	418, 794, 951, 1466, 1484
BsmBI	CGTCTC	1 cut(s)	1484
BsmFI	GGGAC	2 cut(s)	194, 1662
BsmI	GAATGC	1 cut(s)	809
BsnI	GGCC	6 cut(s)	443, 1572, 1688, 1715, 1883, 1929
Bso31I	GGTCTC	2 cut(s)	418, 1466
BsoBI	CYCGRG	1 cut(s)	1463
Bsp1286I	GDGCHC	2 cut(s)	1371, 2041
Bsp143I	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
Bsp19I	CCATGG	1 cut(s)	115
Bsp68I	TCGCGA	1 cut(s)	669
BspACI	CCGC	3 cut(s)	73, 686, 1404
BspANI	GGCC	6 cut(s)	443, 1572, 1688, 1715, 1883, 1929
BspCNI	CTCAG	9 cut(s)	523, 681, 712, 888, 1101, 1258, 1510, 2161, 2308
BspDI	ATCGAT	1 cut(s)	936
BspFNI	CGCG	1 cut(s)	669
BspLI	GGNNCC	7 cut(s)	164, 255, 549, 579, 1431, 1650, 1882
BspPI	GGATC	3 cut(s)	1073, 1729, 1944
BspQI	GCTCTTC	1 cut(s)	1413
BspT107I	GGYRCC	1 cut(s)	1429
BspTNI	GGTCTC	2 cut(s)	418, 1466
BsrBI	CCGCTC	1 cut(s)	1406
BsrDI	GCAATG	2 cut(s)	1761, 2300
BsrI	ACTGG	6 cut(s)	37, 403, 769, 808, 855, 1505
BssECI	CCNNGG	4 cut(s)	115, 388, 1717, 2056
BssMI	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
BssNI	GRCGYC	1 cut(s)	1147
BssSI	CACGAG	1 cut(s)	1390
BssT1I	CCWWGG	3 cut(s)	115, 388, 2056
Bst2BI	CACGAG	1 cut(s)	1390
Bst2UI	CCWGG	4 cut(s)	759, 1174, 1578, 1926
Bst4CI	ACNGT	7 cut(s)	220, 356, 383, 1420, 1495, 1867, 2411
Bst6I	CTCTTC	3 cut(s)	476, 1413, 1599
BstACI	GRCGYC	1 cut(s)	1147
BstBAI	YACGTR	2 cut(s)	364, 1697
BstC8I	GCNNGC	4 cut(s)	1188, 2093, 2097, 2101
BstDSI	CCRYGG	2 cut(s)	115, 1717
BstFNI	CGCG	1 cut(s)	669
BstHHI	GCGC	2 cut(s)	335, 1036
BstKTI	GATC	9 cut(s)	19, 195, 469, 936, 1081, 1249, 1724, 1939, 2211
BstMAI	GTCTC	5 cut(s)	418, 794, 951, 1466, 1484
BstMBI	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
BstMWI	GCNNNNNNNGC	6 cut(s)	691, 700, 1250, 1788, 1802, 2348
BstNI	CCWGG	4 cut(s)	759, 1174, 1578, 1926
BstNSI	RCATGY	1 cut(s)	1040
BstSCI	CCNGG	4 cut(s)	757, 1172, 1576, 1924
BstUI	CGCG	1 cut(s)	669
BstV1I	GCAGC	8 cut(s)	669, 1240, 1258, 1792, 1794, 2228, 2317, 2338
BstX2I	RGATCY	1 cut(s)	1721
BstXI	CCANNNNNNTGG	1 cut(s)	2026
BstYI	RGATCY	1 cut(s)	1721
Bsu15I	ATCGAT	1 cut(s)	936
Bsu36I	CCTNAGG	2 cut(s)	875, 2169
BsuI	GTATCC	1 cut(s)	395
BsuRI	GGCC	6 cut(s)	443, 1572, 1688, 1715, 1883, 1929
BsuTUI	ATCGAT	1 cut(s)	936
BtgI	CCRYGG	2 cut(s)	115, 1717
BtgZI	GCGATG	1 cut(s)	1806
BtrI	CACGTC	1 cut(s)	1303
BtsIMutI	CAGTG	3 cut(s)	30, 1512, 1645
BtuMI	TCGCGA	1 cut(s)	669
Cac8I	GCNNGC	4 cut(s)	1188, 2093, 2097, 2101
CfoI	GCGC	2 cut(s)	335, 1036
Cfr13I	GGNCC	6 cut(s)	752, 830, 1571, 1649, 1714, 1881
ClaI	ATCGAT	1 cut(s)	936
CseI	GACGC	2 cut(s)	1136, 2367
Csp6I	GTAC	6 cut(s)	365, 535, 1263, 1694, 1817, 2050
CspCI	CAANNNNNGTGG	2 cut(s)	1699, 1734
CviAII	CATG	9 cut(s)	116, 841, 1012, 1037, 1180, 1229, 1731, 2212, 2236
CviQI	GTAC	6 cut(s)	365, 535, 1263, 1694, 1817, 2050
DpnI	GATC	9 cut(s)	18, 194, 468, 935, 1080, 1248, 1723, 1938, 2210
DpnII	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
DrdI	GACNNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	128
Eam1104I	CTCTTC	3 cut(s)	476, 1413, 1599
EarI	CTCTTC	3 cut(s)	476, 1413, 1599
Eco130I	CCWWGG	3 cut(s)	115, 388, 2056
Eco147I	AGGCCT	1 cut(s)	443
Eco24I	GRGCYC	1 cut(s)	2041
Eco31I	GGTCTC	2 cut(s)	418, 1466
Eco32I	GATATC	3 cut(s)	112, 1453, 2272
Eco47I	GGWCC	3 cut(s)	752, 830, 1649
Eco57I	CTGAAG	1 cut(s)	1212
Eco81I	CCTNAGG	2 cut(s)	875, 2169
Eco88I	CYCGRG	1 cut(s)	1463
EcoO109I	RGGNCCY	1 cut(s)	1649
EcoRI	GAATTC	1 cut(s)	2330
EcoRII	CCWGG	4 cut(s)	757, 1172, 1576, 1924
EcoRV	GATATC	3 cut(s)	112, 1453, 2272
EcoT14I	CCWWGG	3 cut(s)	115, 388, 2056
EcoT22I	ATGCAT	1 cut(s)	1286
EcoT38I	GRGCYC	1 cut(s)	2041
ErhI	CCWWGG	3 cut(s)	115, 388, 2056
Esp3I	CGTCTC	1 cut(s)	1484
FaeI	CATG	9 cut(s)	119, 844, 1015, 1040, 1183, 1232, 1734, 2215, 2239
FalI	AAGNNNNNCTT	2 cut(s)	35, 67
FaqI	GGGAC	2 cut(s)	194, 1662
FatI	CATG	9 cut(s)	115, 840, 1011, 1036, 1179, 1228, 1730, 2211, 2235
FbaI	TGATCA	2 cut(s)	16, 192
Fnu4HI	GCNGC	9 cut(s)	683, 686, 1254, 1272, 1783, 1806, 2217, 2306, 2352
FriOI	GRGCYC	1 cut(s)	2041
Fsp4HI	GCNGC	9 cut(s)	683, 686, 1254, 1272, 1783, 1806, 2217, 2306, 2352
FspAI	RTGCGCAY	1 cut(s)	1035
FspBI	CTAG	2 cut(s)	1250, 2057
FspI	TGCGCA	1 cut(s)	1035
GlaI	GCGC	2 cut(s)	334, 1035
GluI	GCNGC	9 cut(s)	683, 686, 1254, 1272, 1783, 1806, 2217, 2306, 2352
GsaI	CCCAGC	3 cut(s)	858, 1800, 2388
GsuI	CTGGAG	1 cut(s)	149
HaeIII	GGCC	6 cut(s)	443, 1572, 1688, 1715, 1883, 1929
HgaI	GACGC	2 cut(s)	1136, 2367
HhaI	GCGC	2 cut(s)	335, 1036
Hin1I	GRCGYC	1 cut(s)	1147
Hin1II	CATG	9 cut(s)	119, 844, 1015, 1040, 1183, 1232, 1734, 2215, 2239
Hin6I	GCGC	2 cut(s)	333, 1034
HinP1I	GCGC	2 cut(s)	333, 1034
HindIII	AAGCTT	2 cut(s)	882, 1184
HinfI	GANTC	8 cut(s)	88, 149, 671, 772, 938, 1757, 1970, 2231
HphI	GGTGA	3 cut(s)	406, 476, 1536
Hpy166II	GTNNAC	5 cut(s)	325, 361, 1263, 2029, 2052
Hpy188I	TCNGA	5 cut(s)	28, 1091, 1289, 1457, 2298
Hpy8I	GTNNAC	5 cut(s)	325, 361, 1263, 2029, 2052
HpyAV	CCTTC	7 cut(s)	40, 73, 205, 582, 1086, 2125, 2376
HpyCH4III	ACNGT	7 cut(s)	220, 356, 383, 1420, 1495, 1867, 2411
HpyCH4IV	ACGT	4 cut(s)	363, 1302, 1696, 1921
HpyF10VI	GCNNNNNNNGC	6 cut(s)	691, 700, 1250, 1788, 1802, 2348
HpySE526I	ACGT	4 cut(s)	363, 1302, 1696, 1921
Hsp92I	GRCGYC	1 cut(s)	1147
Hsp92II	CATG	9 cut(s)	119, 844, 1015, 1040, 1183, 1232, 1734, 2215, 2239
HspAI	GCGC	2 cut(s)	333, 1034
Ksp22I	TGATCA	2 cut(s)	16, 192
Kzo9I	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
LguI	GCTCTTC	1 cut(s)	1413
LmnI	GCTCC	9 cut(s)	144, 168, 285, 553, 577, 679, 952, 1510, 1732
Lsp1109I	GCAGC	8 cut(s)	669, 1240, 1258, 1792, 1794, 2228, 2317, 2338
LweI	GCATC	7 cut(s)	703, 831, 1293, 1321, 1522, 1783, 2254
MaeI	CTAG	2 cut(s)	1250, 2057
MaeII	ACGT	4 cut(s)	363, 1302, 1696, 1921
MaeIII	GTNAC	5 cut(s)	133, 394, 569, 1357, 1542
MalI	GATC	9 cut(s)	18, 194, 468, 935, 1080, 1248, 1723, 1938, 2210
MbiI	CCGCTC	1 cut(s)	1406
MboI	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	1 cut(s)	1721
MhlI	GDGCHC	2 cut(s)	1371, 2041
MlyI	GAGTC	3 cut(s)	158, 680, 766
MmeI	TCCRAC	2 cut(s)	601, 1424
Mph1103I	ATGCAT	1 cut(s)	1286
MroXI	GAANNNNTTC	1 cut(s)	50
MseI	TTAA	3 cut(s)	708, 1200, 1344
MslI	CAYNNNNRTG	2 cut(s)	1233, 1279
MspA1I	CMGCKG	2 cut(s)	688, 703
MspR9I	CCNGG	4 cut(s)	759, 1174, 1578, 1926
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	1 cut(s)	809
MvaI	CCWGG	4 cut(s)	759, 1174, 1578, 1926
MvnI	CGCG	1 cut(s)	669
MwoI	GCNNNNNNNGC	6 cut(s)	691, 700, 1250, 1788, 1802, 2348
NcoI	CCATGG	1 cut(s)	115
NdeII	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
NlaIII	CATG	9 cut(s)	119, 844, 1015, 1040, 1183, 1232, 1734, 2215, 2239
NlaIV	GGNNCC	7 cut(s)	164, 255, 549, 579, 1431, 1650, 1882
NmeAIII	GCCGAG	1 cut(s)	1360
NmuCI	GTSAC	4 cut(s)	133, 394, 569, 1542
NruI	TCGCGA	1 cut(s)	669
NsbI	TGCGCA	1 cut(s)	1035
NsiI	ATGCAT	1 cut(s)	1286
NspI	RCATGY	1 cut(s)	1040
PaeR7I	CTCGAG	1 cut(s)	1463
PceI	AGGCCT	1 cut(s)	443
PciSI	GCTCTTC	1 cut(s)	1413
PcsI	WCGNNNNNNNCGW	2 cut(s)	1461, 1927
PctI	GAATGC	1 cut(s)	809
PdmI	GAANNNNTTC	1 cut(s)	50
PfeI	GAWTC	5 cut(s)	88, 938, 1757, 1970, 2231
PflFI	GACNNNGTC	1 cut(s)	218
PfoI	TCCNGGA	2 cut(s)	757, 1576
PkrI	GCNGC	9 cut(s)	684, 687, 1255, 1273, 1784, 1807, 2218, 2307, 2353
PleI	GAGTC	3 cut(s)	157, 679, 766
PpsI	GAGTC	3 cut(s)	157, 679, 766
Ppu21I	YACGTR	2 cut(s)	364, 1697
PpuMI	RGGWCCY	1 cut(s)	1649
Psp5II	RGGWCCY	1 cut(s)	1649
Psp6I	CCWGG	4 cut(s)	757, 1172, 1576, 1924
PspFI	CCCAGC	3 cut(s)	854, 1796, 2384
PspGI	CCWGG	4 cut(s)	757, 1172, 1576, 1924
PspN4I	GGNNCC	7 cut(s)	164, 255, 549, 579, 1431, 1650, 1882
PspPI	GGNCC	6 cut(s)	752, 830, 1571, 1649, 1714, 1881
PspPPI	RGGWCCY	1 cut(s)	1649
PsuI	RGATCY	1 cut(s)	1721
PsyI	GACNNNGTC	1 cut(s)	218
PvuII	CAGCTG	1 cut(s)	703
RruI	TCGCGA	1 cut(s)	669
RsaI	GTAC	6 cut(s)	366, 536, 1264, 1695, 1818, 2051
RsaNI	GTAC	6 cut(s)	365, 535, 1263, 1694, 1817, 2050
RseI	CAYNNNNRTG	2 cut(s)	1233, 1279
SapI	GCTCTTC	1 cut(s)	1413
SaqAI	TTAA	3 cut(s)	708, 1200, 1344
SatI	GCNGC	9 cut(s)	683, 686, 1254, 1272, 1783, 1806, 2217, 2306, 2352
Sau3AI	GATC	9 cut(s)	16, 192, 466, 933, 1078, 1246, 1721, 1936, 2208
Sau96I	GGNCC	6 cut(s)	752, 830, 1571, 1649, 1714, 1881
ScaI	AGTACT	1 cut(s)	536
SchI	GAGTC	3 cut(s)	158, 680, 766
ScrFI	CCNGG	4 cut(s)	759, 1174, 1578, 1926
SduI	GDGCHC	2 cut(s)	1371, 2041
SfaNI	GCATC	7 cut(s)	703, 831, 1293, 1321, 1522, 1783, 2254
Sfr274I	CTCGAG	1 cut(s)	1463
SinI	GGWCC	3 cut(s)	752, 830, 1649
SlaI	CTCGAG	1 cut(s)	1463
SmiMI	CAYNNNNRTG	2 cut(s)	1233, 1279
SmlI	CTYRAG	3 cut(s)	1151, 1463, 1999
SmoI	CTYRAG	3 cut(s)	1151, 1463, 1999
SseBI	AGGCCT	1 cut(s)	443
SsiI	CCGC	3 cut(s)	73, 686, 1404
SspI	AATATT	1 cut(s)	1986
SspMI	CTAG	2 cut(s)	1250, 2057
StuI	AGGCCT	1 cut(s)	443
StyD4I	CCNGG	4 cut(s)	757, 1172, 1576, 1924
StyI	CCWWGG	3 cut(s)	115, 388, 2056
TaaI	ACNGT	7 cut(s)	220, 356, 383, 1420, 1495, 1867, 2411
TaiI	ACGT	4 cut(s)	366, 1305, 1699, 1924
TaqI	TCGA	7 cut(s)	438, 516, 845, 936, 1464, 1707, 2226
TatI	WGTACW	3 cut(s)	534, 1262, 2049
TauI	GCSGC	1 cut(s)	688
TfiI	GAWTC	5 cut(s)	88, 938, 1757, 1970, 2231
Tru1I	TTAA	3 cut(s)	708, 1200, 1344
Tru9I	TTAA	3 cut(s)	708, 1200, 1344
TscAI	CASTG	3 cut(s)	37, 1512, 1645
TseFI	GTSAC	4 cut(s)	133, 394, 569, 1542
TseI	GCWGC	8 cut(s)	682, 1253, 1271, 1782, 1805, 2216, 2305, 2351
Tsp45I	GTSAC	4 cut(s)	133, 394, 569, 1542
TspDTI	ATGAA	9 cut(s)	120, 284, 1152, 1157, 1196, 1624, 1764, 2211, 2252
TspGWI	ACGGA	2 cut(s)	1850, 2264
TspRI	CASTG	3 cut(s)	37, 1512, 1645
Tth111I	GACNNNGTC	1 cut(s)	218
VpaK11BI	GGWCC	3 cut(s)	752, 830, 1649
XapI	RAATTY	5 cut(s)	663, 1523, 1532, 1701, 2330
XceI	RCATGY	1 cut(s)	1040
XcmI	CCANNNNNNNNNTGG	2 cut(s)	173, 395
XhoI	CTCGAG	1 cut(s)	1463
XmaJI	CCTAGG	1 cut(s)	2056
XmnI	GAANNNNTTC	1 cut(s)	50
XspI	CTAG	2 cut(s)	1250, 2057
ZrmI	AGTACT	1 cut(s)	536
Zsp2I	ATGCAT	1 cut(s)	1286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.