Rw6G009270

Cell Division

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0001165
Physical Location & Seq
Forward (+)
15552775 .. 15554541
1767 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G009270.1

Sequence Viewer

Length: 1767 bp
ATGGCTCAGATTCGCGAATTGGTTGAGCTGCCTCTGAGGCATCCTCAGCTGTTTAAATCAATAGGTGTCAAACCACCAAAGGGTATTCTTCTCTATGGTCCTCCTGGAACCGGCAAGACTCTGATTGCAAGAGCTGTTGCTAATGAAACTGGGGCCTTCTTTTTCTGTATCAATGGACCAGAAATCATGTCCAAGATGGCTGGAGAGAGTGAGAGCAACCTCAGGAAAGCTTTTGAGGAAGCAGAGAAGAATGCACCATCAATCATATTTATTGATGAGATTGATTCCATTGCTCCCAAGAGAGAGAAGACTAATGGAGAAATTGAGAGGAGGATTGTTTCCCAGCTCTTGACACTTATGGATGGACTAAAGTCCCGAGCACATGTAATTGTAATGGCGGCTACTAATCGTCCAAACAGTATTGACCCGGCTCTTAGAAGGTTTGGAAGATTTGATAGGGAAATAGATATTGGTGTTCCAGATGAAGTTGGGCGCCTTGAGGTCCTCCACATTCATACCAAGAACATGAAGCTTGCTGAAGATGTTGATTTAGAAAGGGTTGCCAAGGACACTCACGGTTATGTTGGGGCTGATCTAGCTGCTTTATCAACTGAGGCTGCACTTCAATGCATCCGAGAAAAGATGGATGTGATTGACTTGGAAGATGAGACAATAGACGCTGAGGTACTTAACTCAATGGCGGTTACAAATGAGCACTTCCAAACTGCTCTTGGAACAAGCAACCCATCTGCTCTTCGTGAGACGGTTGTTGAAGTGCCCAATGTCACTTGGGATGCAATTGGAGGTCTGGAAAATGTTAAGAGAGAACTTCAAGAGACTGTTCAATATCCTGTTGAGCACCCGGAGAAATTTGAGAAATTCGGAATGTCACCCTCAAAGGGAGTTCTTTTCTATGGCCCTCCTGGATGCGGTAAAACTCTTCTGGCCAAGGCTATTGCCAATGAGTGTCAGGCAAACTTCATCAGTATCAAGGGACCTGAATTGCTAACCATGTGGTTTGGAGAGAGTGAGGCCAATGTCAGGGAAATATTTGACAAGGCTCGTGCATCTGCTCCATGTGTCCTCTTCTTCGATGAGCTTGATTCCATTGCTACTAAAAGAGGTAGTAGTGCAGGTGATTCTGGAGGTGCTGATAGGGTTTTGAACCAACTCCTTACAGAAATGGATGGAGTGTCTGCCAAGAAAACTGTGTTCATTATTGGGGCAACCAACAGACCTGACATTATAGACCCTGCACTTCTTCGACCAGGACGTCTGGATCAGTTGCTTTACATCCCTCTCCCTGATGAGGAATCTCGCTATCAAATATTCAAGTCTTGCTTGAGGAAATCTCCGGTTTCCAAATATGTGGACCTCAGTGCTCTTGCCAAGCACACACCAGGATTTAGTGGTGCTGATATCACAGAAATATGCCAGCGTGCTTGCAAATATGCCATTAGAGACAACATTGAGAAAGATATCGAGAGGGAGAGGAGGAGAAGTGAGAATCCTGAGATTATGGAAGATGATGAGAATGAAGTAGCTGAGATCACTGCAGCTCATTTTGAGGAATCGATGAAGTATGCTCGCAGGAGCGTCAGTGATGCTGATATCCTTAAGTACCAGGCATTTGCGACTACATTGCACCAGGCAAGAGGGTTTGGAGCAGATGAGTTCAGGTTTCCCAGTGGTTCGGGTGCTGCTGTTGGATCTGATCCTTTAGCAACTACTAACGCTGGTGAAGCTGATGAAGATCTTTATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 ko05134 map04141 map05134
Pfam Domains
Protein Families
AAA CDC48_2 CDC48_N

Protein Analysis

588

Amino Acids

64.81

Weight (kDa)

5.02

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 28 - 102 5.8e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 29 - 158 1.7e-48 ATPase family associated with various cellular activities (AAA)
AAA_5 PF07728 29 - 147 9e-06 AAA domain (dynein-related subfamily)
AAA_lid_3 PF17862 181 - 222 2.8e-14 AAA+ lid domain
AAA PF00004 302 - 434 1.9e-47 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 457 - 495 1.1e-12 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1124
AasI GACNNNNNNGTC 1 cut(s) 1272
AatII GACGTC 1 cut(s) 1276
Acc36I ACCTGC 1 cut(s) 1124
AccB1I GGYRCC 1 cut(s) 492
AccII CGCG 1 cut(s) 15
AciI CCGC 3 cut(s) 398, 701, 930
AclWI GGATC 3 cut(s) 1287, 1709, 1717
AcoI YGGCCR 1 cut(s) 945
AcsI RAATTY 2 cut(s) 869, 878
AcuI CTGAAG 1 cut(s) 558
AcyI GRCGYC 2 cut(s) 493, 1273
AfaI GTAC 2 cut(s) 687, 1622
AfiI CCNNNNNNNGG 6 cut(s) 80, 110, 899, 929, 1041, 1309
AflII CTTAAG 1 cut(s) 1616
AflIII ACRYGT 1 cut(s) 382
AgsI TTSAA 6 cut(s) 626, 773, 833, 845, 1165, 1333
AjnI CCWGG 6 cut(s) 103, 922, 1267, 1399, 1623, 1647
AjuI GAANNNNNNNTTGG 2 cut(s) 453, 485
Alw21I GWGCWC 4 cut(s) 382, 717, 861, 1384
Alw26I GTCTC 4 cut(s) 662, 755, 830, 1455
AlwI GGATC 3 cut(s) 1287, 1709, 1717
Ama87I CYCGRG 1 cut(s) 375
AoxI GGCC 4 cut(s) 153, 916, 945, 1032
ApeKI GCWGC 5 cut(s) 28, 599, 617, 1556, 1700
ApoI RAATTY 2 cut(s) 869, 878
AspLEI GCGC 1 cut(s) 495
AspS9I GGNCC 7 cut(s) 98, 153, 176, 502, 917, 995, 1372
AsuC2I CCSGG 2 cut(s) 428, 863
AsuHPI GGTGA 3 cut(s) 882, 1148, 1751
AvaI CYCGRG 1 cut(s) 375
AvaII GGWCC 5 cut(s) 98, 176, 502, 995, 1372
AxyI CCTNAGG 1 cut(s) 221
BaeGI GKGCMC 1 cut(s) 780
BalI TGGCCA 1 cut(s) 947
BanI GGYRCC 1 cut(s) 492
BauI CACGAG 1 cut(s) 1062
BbsI GAAGAC 1 cut(s) 314
Bbv12I GWGCWC 4 cut(s) 382, 717, 861, 1384
BbvCI CCTCAGC 2 cut(s) 45, 681
BbvI GCAGC 5 cut(s) 15, 586, 604, 1568, 1687
BccI CCATC 6 cut(s) 190, 265, 356, 637, 754, 1181
BcgI CGANNNNNNTGC 2 cut(s) 1624, 1658
BciT130I CCWGG 6 cut(s) 105, 924, 1269, 1401, 1625, 1649
BcnI CCSGG 2 cut(s) 428, 863
BcoDI GTCTC 4 cut(s) 662, 755, 830, 1455
BfaI CTAG 1 cut(s) 596
BfmI CTRYAG 1 cut(s) 1554
BfoI RGCGCY 1 cut(s) 496
BfrI CTTAAG 1 cut(s) 1616
BfuAI ACCTGC 1 cut(s) 1124
BglI GCCNNNNNGGC 1 cut(s) 37
BglII AGATCT 1 cut(s) 1753
BisI GCNGC 6 cut(s) 29, 399, 600, 618, 1557, 1701
BlsI GCNGC 6 cut(s) 30, 400, 601, 619, 1558, 1702
Bme1390I CCNGG 8 cut(s) 105, 428, 863, 924, 1269, 1401, 1625, 1649
Bme18I GGWCC 5 cut(s) 98, 176, 502, 995, 1372
BmeT110I CYCGRG 1 cut(s) 375
BmgT120I GGNCC 7 cut(s) 98, 153, 176, 502, 917, 995, 1372
BmiI GGNNCC 4 cut(s) 109, 154, 494, 996
BmrFI CCNGG 8 cut(s) 105, 428, 863, 924, 1269, 1401, 1625, 1649
BmrI ACTGGG 2 cut(s) 159, 1680
BmsI GCATC 6 cut(s) 49, 639, 784, 917, 1076, 1594
BmuI ACTGGG 2 cut(s) 159, 1680
BoxI GACNNNNGTC 1 cut(s) 370
BpiI GAAGAC 1 cut(s) 314
BplI GAGNNNNNCTC 4 cut(s) 28, 60, 1336, 1368
BpmI CTGGAG 2 cut(s) 222, 1164
Bpu10I CCTNAGC 2 cut(s) 45, 681
BpuEI CTTGAG 2 cut(s) 518, 1363
BpuMI CCSGG 2 cut(s) 428, 863
Bsa29I ATCGAT 1 cut(s) 1574
BsaBI GATNNNNATC 1 cut(s) 1752
BsaHI GRCGYC 2 cut(s) 493, 1273
BsaJI CCNNGG 2 cut(s) 564, 948
BsaWI WCCGGW 1 cut(s) 1354
BsaXI ACNNNNNCTCC 4 cut(s) 1486, 1516, 1585, 1615
Bsc4I CCNNNNNNNGG 6 cut(s) 80, 110, 899, 929, 1041, 1309
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 2 cut(s) 154, 1686
Bse21I CCTNAGG 1 cut(s) 221
Bse3DI GCAATG 3 cut(s) 288, 1107, 1640
Bse8I GATNNNNATC 1 cut(s) 1752
BseBI CCWGG 6 cut(s) 105, 924, 1269, 1401, 1625, 1649
BseCI ATCGAT 1 cut(s) 1574
BseDI CCNNGG 2 cut(s) 564, 948
BseGI GGATG 8 cut(s) 40, 367, 630, 652, 799, 932, 1192, 1293
BseJI GATNNNNATC 1 cut(s) 1752
BseLI CCNNNNNNNGG 6 cut(s) 80, 110, 899, 929, 1041, 1309
BseMI GCAATG 3 cut(s) 288, 1107, 1640
BseMII CTCAG 9 cut(s) 20, 26, 59, 235, 603, 672, 1390, 1503, 1536
BseNI ACTGG 2 cut(s) 154, 1686
BseRI GAGGAG 3 cut(s) 343, 1507, 1510
BseSI GKGCMC 1 cut(s) 780
BseXI GCAGC 5 cut(s) 15, 586, 604, 1568, 1687
BseYI CCCAGC 1 cut(s) 342
BsgI GTGCAG 3 cut(s) 603, 1152, 1239
Bsh1236I CGCG 1 cut(s) 15
BshFI GGCC 4 cut(s) 155, 918, 947, 1034
BshNI GGYRCC 1 cut(s) 492
BshVI ATCGAT 1 cut(s) 1574
BsiHKAI GWGCWC 4 cut(s) 382, 717, 861, 1384
BsiHKCI CYCGRG 1 cut(s) 375
BsiSI CCGG 4 cut(s) 111, 428, 863, 1355
BslFI GGGAC 2 cut(s) 358, 1008
BslI CCNNNNNNNGG 6 cut(s) 80, 110, 899, 929, 1041, 1309
BsmAI GTCTC 4 cut(s) 662, 755, 830, 1455
BsmBI CGTCTC 1 cut(s) 755
BsmFI GGGAC 2 cut(s) 358, 1008
BsmI GAATGC 1 cut(s) 256
BsnI GGCC 4 cut(s) 155, 918, 947, 1034
BsoBI CYCGRG 1 cut(s) 375
Bsp1286I GDGCHC 5 cut(s) 382, 717, 780, 861, 1384
Bsp143I GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
Bsp68I TCGCGA 1 cut(s) 15
BspACI CCGC 3 cut(s) 398, 701, 930
BspANI GGCC 4 cut(s) 155, 918, 947, 1034
BspCNI CTCAG 9 cut(s) 19, 27, 58, 234, 604, 673, 1389, 1504, 1537
BspDI ATCGAT 1 cut(s) 1574
BspFNI CGCG 1 cut(s) 15
BspLI GGNNCC 4 cut(s) 109, 154, 494, 996
BspMAI CTGCAG 1 cut(s) 1558
BspMI ACCTGC 1 cut(s) 1124
BspPI GGATC 3 cut(s) 1287, 1709, 1717
BspQI GCTCTTC 1 cut(s) 759
BspT107I GGYRCC 1 cut(s) 492
BspTI CTTAAG 1 cut(s) 1616
BsrDI GCAATG 3 cut(s) 288, 1107, 1640
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 2 cut(s) 154, 1686
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 2 cut(s) 564, 948
BssMI GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
BssNI GRCGYC 2 cut(s) 493, 1273
BssSI CACGAG 1 cut(s) 1062
BssT1I CCWWGG 2 cut(s) 564, 948
Bst2BI CACGAG 1 cut(s) 1062
Bst2UI CCWGG 6 cut(s) 105, 924, 1269, 1401, 1625, 1649
Bst4CI ACNGT 5 cut(s) 419, 578, 766, 841, 1210
Bst6I CTCTTC 3 cut(s) 759, 945, 1091
BstACI GRCGYC 2 cut(s) 493, 1273
BstAFI CTTAAG 1 cut(s) 1616
BstC8I GCNNGC 5 cut(s) 534, 1436, 1440, 1444, 1588
BstF5I GGATG 8 cut(s) 40, 367, 630, 652, 799, 932, 1192, 1293
BstFNI CGCG 1 cut(s) 15
BstH2I RGCGCY 1 cut(s) 496
BstHHI GCGC 1 cut(s) 495
BstKTI GATC 6 cut(s) 595, 1282, 1551, 1712, 1717, 1756
BstMAI GTCTC 4 cut(s) 662, 755, 830, 1455
BstMBI GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
BstMWI GCNNNNNNNGC 4 cut(s) 37, 46, 596, 1742
BstNI CCWGG 6 cut(s) 105, 924, 1269, 1401, 1625, 1649
BstNSI RCATGY 1 cut(s) 386
BstPAI GACNNNNGTC 1 cut(s) 370
BstSCI CCNGG 8 cut(s) 103, 426, 861, 922, 1267, 1399, 1623, 1647
BstSFI CTRYAG 1 cut(s) 1554
BstSLI GKGCMC 1 cut(s) 780
BstUI CGCG 1 cut(s) 15
BstV1I GCAGC 5 cut(s) 15, 586, 604, 1568, 1687
BstV2I GAAGAC 1 cut(s) 314
BstX2I RGATCY 2 cut(s) 1709, 1753
BstXI CCANNNNNNTGG 1 cut(s) 1369
BstYI RGATCY 2 cut(s) 1709, 1753
Bsu15I ATCGAT 1 cut(s) 1574
Bsu36I CCTNAGG 1 cut(s) 221
BsuRI GGCC 4 cut(s) 155, 918, 947, 1034
BsuTUI ATCGAT 1 cut(s) 1574
BtsCI GGATG 8 cut(s) 40, 367, 630, 652, 799, 932, 1192, 1293
BtsI GCAGTG 1 cut(s) 1551
BtsIMutI CAGTG 4 cut(s) 1384, 1551, 1606, 1693
BtuMI TCGCGA 1 cut(s) 15
BveI ACCTGC 1 cut(s) 1124
Cac8I GCNNGC 5 cut(s) 534, 1436, 1440, 1444, 1588
CfoI GCGC 1 cut(s) 495
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 7 cut(s) 98, 153, 176, 502, 917, 995, 1372
ClaI ATCGAT 1 cut(s) 1574
CseI GACGC 2 cut(s) 686, 1585
Csp6I GTAC 2 cut(s) 686, 1621
CviAII CATG 5 cut(s) 187, 383, 526, 1012, 1077
CviQI GTAC 2 cut(s) 686, 1621
DinI GGCGCC 1 cut(s) 494
DpnI GATC 6 cut(s) 594, 1281, 1550, 1711, 1716, 1755
DpnII GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
DraI TTTAAA 1 cut(s) 55
DrdI GACNNNNNNGTC 1 cut(s) 1272
DseDI GACNNNNNNGTC 1 cut(s) 1272
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 3 cut(s) 759, 945, 1091
EarI CTCTTC 3 cut(s) 759, 945, 1091
Eco130I CCWWGG 2 cut(s) 564, 948
Eco32I GATATC 3 cut(s) 1420, 1480, 1612
Eco47I GGWCC 5 cut(s) 98, 176, 502, 995, 1372
Eco57I CTGAAG 1 cut(s) 558
Eco81I CCTNAGG 1 cut(s) 221
Eco88I CYCGRG 1 cut(s) 375
EcoO109I RGGNCCY 3 cut(s) 153, 502, 995
EcoRII CCWGG 6 cut(s) 103, 922, 1267, 1399, 1623, 1647
EcoRV GATATC 3 cut(s) 1420, 1480, 1612
EcoT14I CCWWGG 2 cut(s) 564, 948
EcoT22I ATGCAT 1 cut(s) 632
EgeI GGCGCC 1 cut(s) 494
EheI GGCGCC 1 cut(s) 494
ErhI CCWWGG 2 cut(s) 564, 948
Esp3I CGTCTC 1 cut(s) 755
FaeI CATG 5 cut(s) 190, 386, 529, 1015, 1080
FalI AAGNNNNNCTT 2 cut(s) 1325, 1357
FaqI GGGAC 2 cut(s) 358, 1008
FatI CATG 5 cut(s) 186, 382, 525, 1011, 1076
Fnu4HI GCNGC 6 cut(s) 29, 399, 600, 618, 1557, 1701
FokI GGATG 8 cut(s) 27, 374, 617, 659, 806, 939, 1199, 1280
Fsp4HI GCNGC 6 cut(s) 29, 399, 600, 618, 1557, 1701
FspBI CTAG 1 cut(s) 596
GlaI GCGC 1 cut(s) 494
GluI GCNGC 6 cut(s) 29, 399, 600, 618, 1557, 1701
GsaI CCCAGC 1 cut(s) 346
GsuI CTGGAG 2 cut(s) 222, 1164
HaeII RGCGCY 1 cut(s) 496
HaeIII GGCC 4 cut(s) 155, 918, 947, 1034
HapII CCGG 4 cut(s) 111, 428, 863, 1355
HgaI GACGC 2 cut(s) 686, 1585
HhaI GCGC 1 cut(s) 495
Hin1I GRCGYC 2 cut(s) 493, 1273
Hin1II CATG 5 cut(s) 190, 386, 529, 1015, 1080
Hin6I GCGC 1 cut(s) 493
HinP1I GCGC 1 cut(s) 493
HindIII AAGCTT 2 cut(s) 228, 530
HinfI GANTC 8 cut(s) 10, 118, 284, 1103, 1139, 1313, 1507, 1571
HpaII CCGG 4 cut(s) 111, 428, 863, 1355
HphI GGTGA 3 cut(s) 882, 1148, 1751
Hpy166II GTNNAC 1 cut(s) 1372
Hpy188I TCNGA 6 cut(s) 9, 36, 123, 635, 884, 1714
Hpy8I GTNNAC 1 cut(s) 1372
HpyAV CCTTC 2 cut(s) 166, 432
HpyCH4III ACNGT 5 cut(s) 419, 578, 766, 841, 1210
HpyCH4IV ACGT 1 cut(s) 1273
HpyF10VI GCNNNNNNNGC 4 cut(s) 37, 46, 596, 1742
HpySE526I ACGT 1 cut(s) 1273
Hsp92I GRCGYC 2 cut(s) 493, 1273
Hsp92II CATG 5 cut(s) 190, 386, 529, 1015, 1080
HspAI GCGC 1 cut(s) 493
KasI GGCGCC 1 cut(s) 492
Kzo9I GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
LguI GCTCTTC 1 cut(s) 759
LmnI GCTCC 4 cut(s) 298, 1078, 1593, 1664
Lsp1109I GCAGC 5 cut(s) 15, 586, 604, 1568, 1687
LweI GCATC 6 cut(s) 49, 639, 784, 917, 1076, 1594
MaeI CTAG 1 cut(s) 596
MaeII ACGT 1 cut(s) 1273
MaeIII GTNAC 3 cut(s) 703, 784, 888
MalI GATC 6 cut(s) 594, 1281, 1550, 1711, 1716, 1755
MboI GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
MfeI CAATTG 1 cut(s) 798
MflI RGATCY 2 cut(s) 1709, 1753
MhlI GDGCHC 5 cut(s) 382, 717, 780, 861, 1384
MlsI TGGCCA 1 cut(s) 947
MluCI AATT 7 cut(s) 17, 321, 387, 798, 869, 878, 1001
MluNI TGGCCA 1 cut(s) 947
Mly113I GGCGCC 1 cut(s) 493
MlyI GAGTC 1 cut(s) 112
MmeI TCCRAC 1 cut(s) 1687
Mox20I TGGCCA 1 cut(s) 947
Mph1103I ATGCAT 1 cut(s) 632
MscI TGGCCA 1 cut(s) 947
MseI TTAA 4 cut(s) 54, 690, 819, 1617
MslI CAYNNNNRTG 2 cut(s) 579, 625
Msp20I TGGCCA 1 cut(s) 947
MspA1I CMGCKG 1 cut(s) 49
MspCI CTTAAG 1 cut(s) 1616
MspI CCGG 4 cut(s) 111, 428, 863, 1355
MspR9I CCNGG 8 cut(s) 105, 428, 863, 924, 1269, 1401, 1625, 1649
MunI CAATTG 1 cut(s) 798
Mva1269I GAATGC 1 cut(s) 256
MvaI CCWGG 6 cut(s) 105, 924, 1269, 1401, 1625, 1649
MvnI CGCG 1 cut(s) 15
MwoI GCNNNNNNNGC 4 cut(s) 37, 46, 596, 1742
NarI GGCGCC 1 cut(s) 493
NciI CCSGG 2 cut(s) 428, 863
NdeII GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
NlaIII CATG 5 cut(s) 190, 386, 529, 1015, 1080
NlaIV GGNNCC 4 cut(s) 109, 154, 494, 996
NmuCI GTSAC 2 cut(s) 784, 888
NruI TCGCGA 1 cut(s) 15
NsiI ATGCAT 1 cut(s) 632
NspI RCATGY 1 cut(s) 386
PaqCI CACCTGC 1 cut(s) 1124
PciI ACATGT 1 cut(s) 382
PciSI GCTCTTC 1 cut(s) 759
PcsI WCGNNNNNNNCGW 1 cut(s) 1270
PctI GAATGC 1 cut(s) 256
PfeI GAWTC 7 cut(s) 10, 284, 1103, 1139, 1313, 1507, 1571
PfoI TCCNGGA 2 cut(s) 103, 922
PkrI GCNGC 6 cut(s) 30, 400, 601, 619, 1558, 1702
PleI GAGTC 1 cut(s) 112
PluTI GGCGCC 1 cut(s) 496
PpsI GAGTC 1 cut(s) 112
PpuMI RGGWCCY 2 cut(s) 502, 995
PscI ACATGT 1 cut(s) 382
PshAI GACNNNNGTC 1 cut(s) 370
Psp5II RGGWCCY 2 cut(s) 502, 995
Psp6I CCWGG 6 cut(s) 103, 922, 1267, 1399, 1623, 1647
PspFI CCCAGC 1 cut(s) 342
PspGI CCWGG 6 cut(s) 103, 922, 1267, 1399, 1623, 1647
PspN4I GGNNCC 4 cut(s) 109, 154, 494, 996
PspPI GGNCC 7 cut(s) 98, 153, 176, 502, 917, 995, 1372
PspPPI RGGWCCY 2 cut(s) 502, 995
PstI CTGCAG 1 cut(s) 1558
PsuI RGATCY 2 cut(s) 1709, 1753
PvuII CAGCTG 1 cut(s) 49
RruI TCGCGA 1 cut(s) 15
RsaI GTAC 2 cut(s) 687, 1622
RsaNI GTAC 2 cut(s) 686, 1621
RseI CAYNNNNRTG 2 cut(s) 579, 625
SapI GCTCTTC 1 cut(s) 759
SaqAI TTAA 4 cut(s) 54, 690, 819, 1617
SatI GCNGC 6 cut(s) 29, 399, 600, 618, 1557, 1701
Sau3AI GATC 6 cut(s) 592, 1279, 1548, 1709, 1714, 1753
Sau96I GGNCC 7 cut(s) 98, 153, 176, 502, 917, 995, 1372
SchI GAGTC 1 cut(s) 112
ScrFI CCNGG 8 cut(s) 105, 428, 863, 924, 1269, 1401, 1625, 1649
SduI GDGCHC 5 cut(s) 382, 717, 780, 861, 1384
SfaNI GCATC 6 cut(s) 49, 639, 784, 917, 1076, 1594
SfcI CTRYAG 1 cut(s) 1554
SfoI GGCGCC 1 cut(s) 494
SinI GGWCC 5 cut(s) 98, 176, 502, 995, 1372
SmiMI CAYNNNNRTG 2 cut(s) 579, 625
SmlI CTYRAG 3 cut(s) 497, 1342, 1616
SmoI CTYRAG 3 cut(s) 497, 1342, 1616
Sse9I AATT 7 cut(s) 17, 321, 387, 798, 869, 878, 1001
SsiI CCGC 3 cut(s) 398, 701, 930
SspDI GGCGCC 1 cut(s) 492
SspI AATATT 2 cut(s) 1050, 1329
SspMI CTAG 1 cut(s) 596
StyD4I CCNGG 8 cut(s) 103, 426, 861, 922, 1267, 1399, 1623, 1647
StyI CCWWGG 2 cut(s) 564, 948
TaaI ACNGT 5 cut(s) 419, 578, 766, 841, 1210
TaiI ACGT 1 cut(s) 1276
TaqI TCGA 4 cut(s) 1092, 1264, 1482, 1574
TasI AATT 7 cut(s) 17, 321, 387, 798, 869, 878, 1001
TauI GCSGC 1 cut(s) 401
TfiI GAWTC 7 cut(s) 10, 284, 1103, 1139, 1313, 1507, 1571
Tru1I TTAA 4 cut(s) 54, 690, 819, 1617
Tru9I TTAA 4 cut(s) 54, 690, 819, 1617
TscAI CASTG 4 cut(s) 1384, 1558, 1606, 1693
TseFI GTSAC 2 cut(s) 784, 888
TseI GCWGC 5 cut(s) 28, 599, 617, 1556, 1700
Tsp45I GTSAC 2 cut(s) 784, 888
TspDTI ATGAA 9 cut(s) 159, 498, 503, 542, 970, 1204, 1551, 1592, 1764
TspRI CASTG 4 cut(s) 1384, 1558, 1606, 1693
Vha464I CTTAAG 1 cut(s) 1616
VpaK11BI GGWCC 5 cut(s) 98, 176, 502, 995, 1372
XapI RAATTY 2 cut(s) 869, 878
XceI RCATGY 1 cut(s) 386
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XspI CTAG 1 cut(s) 596
ZraI GACGTC 1 cut(s) 1274
Zsp2I ATGCAT 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.