Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0033604.1

Orthogroup ID

OG0001165

Physical Location & Seq

Genomic Coordinates Reverse (-)

27 .. 1952

Gene Structure 1926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0033604.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

atgtacaaccaattcgccgatcaatcttccaattccaataaggccacaaagagggacttcagcaatgtccacggttccgatgatggcgatggcgacgcaatcttggtcaatgcaatgaaaagaatcaagctctcatcagataatggtgactcatctcagatgaagacgaagaagaaggaaattgggtatgaagacgtgggtggtgtgaggaagcagatggctcagattcgtgagttagtggagcttccattgaagcaacccaagttgtttaagttcattggagtgaagcctccaaagggtattcttctatacggcccccctggctcgggcaagactctgattgcccgagccctcgcgaacgagacgggggccttgtttttgtgcattaacgggccggagatcatgtcgaaaatggctggggagagtgagagcaatctaaggaaggttttcgaggaagcggagaagaatgcaccgtctattgtgtttatagatgagattgactcaattgctccgaagagagagaagagtaatggggaagttgagaggaggattgtttcacagctcttgacactcatggatggtatgaagtcgaaagggcgtgtgattgttattggggccacgaatcggcctaatagtattgacccggctcttaggaggtgtggaagatttgatagggagatagatattggtgttcctgatgaggccgggcggcttgaggtgcttcgaatccataccaagaacatgaagcttggtgaggatgtggagttggagaagatagctaaggagacacatgggtatgttggggcagatttagctgcattgtgcactgaggctgcgcttcaatgcataagagagaatatggatgaaattgactgggaagatgtggagacattagatgctgcgatgcttggctctatgaaagttggaaatgagcactttcggattgctttgcgagcaagcaacccttctgctcttcgcgaaacggctgtggaggtgccgaatgtgacttgggatgctatcgggggtctggagaaagtgaagagggaacttcaggagactgttcagtatccagttgagcatcctgagaagtttgagaaatatgggatgtcaccctcaaagggggttcttttctatggccctcctggttgtggtaagacccttttggccaaggctattgccaatgagtgtcaggcaaattttattagtatcaaggggcctgagttgcttactagtgggtttggagagagtgaggcgaatgtgagggaaattttcgacaaggctagagggtctgctccatgtgtcctcttttttgatgaactcgattccattgctactcagagaagtagtaatgctggaggtggtggtgctgctgatagggttttgaaccaactccttacagaaatggatggattgtctgctaagaaaactgtctttgttatcggggccaccaatagacctgacattatagaccctgcacttctgcgtccaggacgtctggaccaattgatttacatccctctccctgatgaggaatcccgctgtgaaatattcaaggcttgcttgaggaagtctccagtttccaaagacgtgaacatcagagctcttgcaaagaacactagaggatttagtggtgctgatatcacagaaatatgccagcgtgcttgcaaatatgccattagagagaacattgggaatgatatcaagagggagatgagcagaagtgagaatcgtgaagctatggaggaggatgaagtggcagagatcacggcagctcacttcgtggagtcgatgaagtatgctcgtagaagtgttggtgattccgatatccgcaaatacaaggcatacgctcagacattgcagcagtctagagggtttggaacagaccagttcaaaattgcagggagcggttctcatgctgctgtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0010035 GO:0010038 GO:0010604 GO:0012505 GO:0016020 GO:0019222 GO:0031974 GO:0031981 GO:0042176 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046686 GO:0048518 GO:0050789 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0070013 GO:0071944 GO:0080090

KEGG Pathways

Metabolic & Signaling

ko04141 ko05134 map04141 map05134

Pfam Domains

Protein Families

AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

641

Amino Acids

70.39

Weight (kDa)

6.03

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53230
fragaria_vesca	FvH4_2g06940 FvH4_2g06950 FvH4_2g07260 FvH4_4g17680 FvH4_6g16220 FvH4_6g16220
malus_domestica	MD03G1125700.v1.1 MD04G1094400.v1.1 MD11G1142500.v1.1 MD12G1114300.v1.1 MD17G1225300.v1.1 MD17G1225400.v1.1 MD17G1225600.v1.1 MD17G1228800.v1.1
prunus_persica	Prupe.4G237600_v2.0.a1 Prupe.6G107800_v2.0.a1 Prupe.6G233700_v2.0.a1 Prupe.6G233700_v2.0.a1
pyrus_communis	pycom04g08940 pycom04g08950 pycom09g14580 pycom11g11820 pycom12g11360
rosa_chinensis	RchiOBHm_Chr3g0470061 RchiOBHm_Chr4g0421621 RchiOBHm_Chr6g0259281 RchiOBHm_Chr6g0259871
rosa_laevigata	RLG00000007663 RLG00000014503 RLG00000014543 RLG00000024300
rosa_multiflora	Rmu_co8522155.1_g000003 Rmu_sc0005600.1_g000001 Rmu_sc0009049.1_g000005 Rmu_sc0011974.1_g000005 Rmu_sc0033604.1_g000001 Rmu_sc0033605.1_g000001 Rmu_ssc0000050.1_g000089
rosa_roxburghii	Rroxscaffold_5G00363870 Rroxscaffold_6G00411220
rosa_rugosa	Rorug03G0106600 Rorug04G0173900 Rorug05G0586800 Rorug05G0590900
rosa_samantha	Rh3AG155800 Rh4CG248200 Rh6AG103300 Rh6AG103400 Rh6AG107600 Rh6BG095700 Rh6CG092600 Rh6CG096400
rosa_wichuraiana	Rw3G014670 Rw4G020040 Rw6G008920 Rw6G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1495
AccB1I	GGYRCC	1 cut(s)	994
AccBSI	CCGCTC	1 cut(s)	1905
AccII	CGCG	2 cut(s)	356, 978
AciI	CCGC	5 cut(s)	458, 709, 1537, 1828, 1905
AcoI	YGGCCR	1 cut(s)	1164
AcsI	RAATTY	2 cut(s)	1195, 1266
AcuI	CTGAAG	2 cut(s)	43, 1034
AcyI	GRCGYC	1 cut(s)	1492
AdeI	CACNNNGTG	1 cut(s)	1780
AfaI	GTAC	1 cut(s)	5
AfiI	CCNNNNNNNGG	9 cut(s)	51, 296, 325, 326, 624, 1118, 1119, 1148, 1528
AgsI	TTSAA	5 cut(s)	253, 842, 1384, 1552, 1891
AhlI	ACTAGT	1 cut(s)	1229
AjiI	CACGTC	2 cut(s)	196, 1588
AjnI	CCWGG	3 cut(s)	319, 1141, 1486
AluBI	AGCT	9 cut(s)	130, 244, 562, 748, 779, 815, 1601, 1736, 1772
AluI	AGCT	9 cut(s)	130, 244, 562, 748, 779, 815, 1601, 1736, 1772
Alw21I	GWGCWC	3 cut(s)	827, 936, 1603
Alw26I	GTCTC	5 cut(s)	356, 779, 881, 1049, 1575
Alw44I	GTGCAC	1 cut(s)	823
Ama87I	CYCGRG	2 cut(s)	325, 345
ApaLI	GTGCAC	1 cut(s)	823
ApeKI	GCWGC	7 cut(s)	815, 833, 899, 1367, 1769, 1858, 1916
ApoI	RAATTY	2 cut(s)	1195, 1266
Asp700I	GAANNNNTTC	1 cut(s)	446
AspLEI	GCGC	1 cut(s)	838
AspS9I	GGNCC	8 cut(s)	314, 369, 392, 615, 1136, 1214, 1443, 1498
AsuC2I	CCSGG	2 cut(s)	644, 706
AsuHPI	GGTGA	4 cut(s)	158, 764, 1101, 1826
AsuII	TTCGAA	1 cut(s)	724
AvaI	CYCGRG	2 cut(s)	325, 345
AvaII	GGWCC	1 cut(s)	1498
BaeGI	GKGCMC	1 cut(s)	827
BalI	TGGCCA	1 cut(s)	1166
BanI	GGYRCC	1 cut(s)	994
BanII	GRGCYC	2 cut(s)	352, 1603
BbsI	GAAGAC	2 cut(s)	170, 198
Bbv12I	GWGCWC	3 cut(s)	827, 936, 1603
BbvI	GCAGC	7 cut(s)	802, 820, 886, 1354, 1781, 1870, 1903
BccI	CCATC	5 cut(s)	77, 83, 211, 572, 1400
BceAI	ACGGC	3 cut(s)	328, 999, 1782
BcgI	CGANNNNNNTGC	2 cut(s)	1310, 1344
BciT130I	CCWGG	3 cut(s)	321, 1143, 1488
BciVI	GTATCC	1 cut(s)	1077
BcnI	CCSGG	2 cut(s)	644, 706
BcoDI	GTCTC	5 cut(s)	356, 779, 881, 1049, 1575
BcuI	ACTAGT	1 cut(s)	1229
BfaI	CTAG	4 cut(s)	1230, 1281, 1617, 1866
BfuI	GTATCC	1 cut(s)	1077
BglI	GCCNNNNNGGC	1 cut(s)	321
BisI	GCNGC	8 cut(s)	710, 816, 834, 900, 1368, 1770, 1859, 1917
BlsI	GCNGC	8 cut(s)	711, 817, 835, 901, 1369, 1771, 1860, 1918
Bme1390I	CCNGG	5 cut(s)	321, 644, 706, 1143, 1488
Bme18I	GGWCC	1 cut(s)	1498
BmeT110I	CYCGRG	2 cut(s)	325, 345
BmgBI	CACGTC	2 cut(s)	196, 1588
BmgT120I	GGNCC	8 cut(s)	314, 369, 392, 615, 1136, 1214, 1443, 1498
BmiI	GGNNCC	7 cut(s)	76, 316, 370, 616, 996, 1215, 1444
BmrFI	CCNGG	5 cut(s)	321, 644, 706, 1143, 1488
BmrI	ACTGGG	1 cut(s)	883
BmsI	GCATC	4 cut(s)	886, 894, 1003, 1087
BmuI	ACTGGG	1 cut(s)	883
BpiI	GAAGAC	2 cut(s)	170, 198
BplI	GAGNNNNNCTC	6 cut(s)	485, 517, 1555, 1587, 1894, 1926
BpmI	CTGGAG	3 cut(s)	1049, 1374, 1557
Bpu10I	CCTNAGC	1 cut(s)	780
Bpu14I	TTCGAA	1 cut(s)	724
BpuEI	CTTGAG	2 cut(s)	734, 1582
BpuMI	CCSGG	2 cut(s)	644, 706
BsaBI	GATNNNNATC	1 cut(s)	1511
BsaHI	GRCGYC	1 cut(s)	1492
BsaJI	CCNNGG	3 cut(s)	70, 319, 1167
BsaXI	ACNNNNNCTCC	2 cut(s)	389, 419
Bsc4I	CCNNNNNNNGG	9 cut(s)	51, 296, 325, 326, 624, 1118, 1119, 1148, 1528
Bse1I	ACTGG	4 cut(s)	878, 1070, 1574, 1885
Bse3DI	GCAATG	4 cut(s)	70, 120, 1326, 1853
Bse8I	GATNNNNATC	1 cut(s)	1511
BseBI	CCWGG	3 cut(s)	321, 1143, 1488
BseDI	CCNNGG	3 cut(s)	70, 319, 1167
BseGI	GGATG	9 cut(s)	583, 763, 868, 1018, 1078, 1110, 1411, 1512, 1753
BseJI	GATNNNNATC	1 cut(s)	1511
BseLI	CCNNNNNNNGG	9 cut(s)	51, 296, 325, 326, 624, 1118, 1119, 1148, 1528
BseMI	GCAATG	4 cut(s)	70, 120, 1326, 1853
BseMII	CTCAG	7 cut(s)	170, 236, 819, 1074, 1209, 1349, 1862
BseNI	ACTGG	4 cut(s)	878, 1070, 1574, 1885
BseRI	GAGGAG	2 cut(s)	559, 1757
BseSI	GKGCMC	1 cut(s)	827
BseXI	GCAGC	7 cut(s)	802, 820, 886, 1354, 1781, 1870, 1903
BseYI	CCCAGC	1 cut(s)	416
BsgI	GTGCAG	1 cut(s)	1458
Bsh1236I	CGCG	2 cut(s)	356, 978
BshNI	GGYRCC	1 cut(s)	994
BsiHKAI	GWGCWC	3 cut(s)	827, 936, 1603
BsiHKCI	CYCGRG	2 cut(s)	325, 345
BsiSI	CCGG	3 cut(s)	395, 644, 705
BslFI	GGGAC	1 cut(s)	68
BslI	CCNNNNNNNGG	9 cut(s)	51, 296, 325, 326, 624, 1118, 1119, 1148, 1528
BsmAI	GTCTC	5 cut(s)	356, 779, 881, 1049, 1575
BsmBI	CGTCTC	1 cut(s)	356
BsmFI	GGGAC	1 cut(s)	68
BsmI	GAATGC	1 cut(s)	472
BsoBI	CYCGRG	2 cut(s)	325, 345
Bsp119I	TTCGAA	1 cut(s)	724
Bsp1286I	GDGCHC	4 cut(s)	352, 827, 936, 1603
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	3 cut(s)	19, 399, 1761
Bsp68I	TCGCGA	2 cut(s)	356, 978
BspACI	CCGC	5 cut(s)	458, 709, 1537, 1828, 1905
BspCNI	CTCAG	7 cut(s)	169, 235, 820, 1075, 1210, 1348, 1861
BspFNI	CGCG	2 cut(s)	356, 978
BspLI	GGNNCC	7 cut(s)	76, 316, 370, 616, 996, 1215, 1444
BspQI	GCTCTTC	1 cut(s)	978
BspT104I	TTCGAA	1 cut(s)	724
BspT107I	GGYRCC	1 cut(s)	994
BsrBI	CCGCTC	1 cut(s)	1905
BsrDI	GCAATG	4 cut(s)	70, 120, 1326, 1853
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	4 cut(s)	878, 1070, 1574, 1885
BssECI	CCNNGG	3 cut(s)	70, 319, 1167
BssMI	GATC	3 cut(s)	19, 399, 1761
BssNI	GRCGYC	1 cut(s)	1492
BssT1I	CCWWGG	1 cut(s)	1167
Bst2UI	CCWGG	3 cut(s)	321, 1143, 1488
Bst4CI	ACNGT	4 cut(s)	74, 474, 1060, 1429
Bst6I	CTCTTC	4 cut(s)	509, 518, 978, 1034
BstACI	GRCGYC	1 cut(s)	1492
BstAUI	TGTACA	1 cut(s)	3
BstBI	TTCGAA	1 cut(s)	724
BstC8I	GCNNGC	6 cut(s)	954, 958, 1558, 1655, 1659, 1663
BstDSI	CCRYGG	1 cut(s)	70
BstF5I	GGATG	9 cut(s)	583, 763, 868, 1018, 1078, 1110, 1411, 1512, 1753
BstFNI	CGCG	2 cut(s)	356, 978
BstHHI	GCGC	1 cut(s)	838
BstKTI	GATC	3 cut(s)	22, 402, 1764
BstMAI	GTCTC	5 cut(s)	356, 779, 881, 1049, 1575
BstMBI	GATC	3 cut(s)	19, 399, 1761
BstMWI	GCNNNNNNNGC	5 cut(s)	321, 718, 812, 953, 1222
BstNI	CCWGG	3 cut(s)	321, 1143, 1488
BstSCI	CCNGG	5 cut(s)	319, 642, 704, 1141, 1486
BstSLI	GKGCMC	1 cut(s)	827
BstUI	CGCG	2 cut(s)	356, 978
BstV1I	GCAGC	7 cut(s)	802, 820, 886, 1354, 1781, 1870, 1903
BstV2I	GAAGAC	2 cut(s)	170, 198
BsuI	GTATCC	1 cut(s)	1077
BtgI	CCRYGG	1 cut(s)	70
BtgZI	GCGATG	2 cut(s)	102, 917
BtrI	CACGTC	2 cut(s)	196, 1588
BtsCI	GGATG	9 cut(s)	583, 763, 868, 1018, 1078, 1110, 1411, 1512, 1753
BtsIMutI	CAGTG	1 cut(s)	825
BtuMI	TCGCGA	2 cut(s)	356, 978
Cac8I	GCNNGC	6 cut(s)	954, 958, 1558, 1655, 1659, 1663
CfoI	GCGC	1 cut(s)	838
Cfr13I	GGNCC	8 cut(s)	314, 369, 392, 615, 1136, 1214, 1443, 1498
CseI	GACGC	2 cut(s)	104, 1472
Csp6I	GTAC	1 cut(s)	4
CviAII	CATG	6 cut(s)	403, 574, 742, 791, 1296, 1913
CviQI	GTAC	1 cut(s)	4
DpnI	GATC	3 cut(s)	21, 401, 1763
DpnII	GATC	3 cut(s)	19, 399, 1761
DraIII	CACNNNGTG	1 cut(s)	1780
EaeI	YGGCCR	1 cut(s)	1164
Eam1104I	CTCTTC	4 cut(s)	509, 518, 978, 1034
EarI	CTCTTC	4 cut(s)	509, 518, 978, 1034
Ecl136II	GAGCTC	1 cut(s)	1601
Eco130I	CCWWGG	1 cut(s)	1167
Eco24I	GRGCYC	2 cut(s)	352, 1603
Eco32I	GATATC	3 cut(s)	1639, 1699, 1825
Eco47I	GGWCC	1 cut(s)	1498
Eco53kI	GAGCTC	1 cut(s)	1601
Eco57I	CTGAAG	2 cut(s)	43, 1034
Eco88I	CYCGRG	2 cut(s)	325, 345
EcoICRI	GAGCTC	1 cut(s)	1601
EcoO109I	RGGNCCY	2 cut(s)	369, 1214
EcoRII	CCWGG	3 cut(s)	319, 1141, 1486
EcoRV	GATATC	3 cut(s)	1639, 1699, 1825
EcoT14I	CCWWGG	1 cut(s)	1167
EcoT22I	ATGCAT	1 cut(s)	848
EcoT38I	GRGCYC	2 cut(s)	352, 1603
ErhI	CCWWGG	1 cut(s)	1167
Esp3I	CGTCTC	1 cut(s)	356
FaeI	CATG	6 cut(s)	406, 577, 745, 794, 1299, 1916
FalI	AAGNNNNNCTT	6 cut(s)	41, 73, 949, 981, 1544, 1576
FaqI	GGGAC	1 cut(s)	68
FatI	CATG	6 cut(s)	402, 573, 741, 790, 1295, 1912
FauI	CCCGC	1 cut(s)	1544
Fnu4HI	GCNGC	8 cut(s)	710, 816, 834, 900, 1368, 1770, 1859, 1917
FokI	GGATG	9 cut(s)	590, 770, 875, 1025, 1065, 1117, 1418, 1499, 1760
FriOI	GRGCYC	2 cut(s)	352, 1603
Fsp4HI	GCNGC	8 cut(s)	710, 816, 834, 900, 1368, 1770, 1859, 1917
FspBI	CTAG	4 cut(s)	1230, 1281, 1617, 1866
GlaI	GCGC	1 cut(s)	837
GluI	GCNGC	8 cut(s)	710, 816, 834, 900, 1368, 1770, 1859, 1917
GsaI	CCCAGC	1 cut(s)	420
GsuI	CTGGAG	3 cut(s)	1049, 1374, 1557
HapII	CCGG	3 cut(s)	395, 644, 705
HgaI	GACGC	2 cut(s)	104, 1472
HhaI	GCGC	1 cut(s)	838
Hin1I	GRCGYC	1 cut(s)	1492
Hin1II	CATG	6 cut(s)	406, 577, 745, 794, 1299, 1916
Hin6I	GCGC	1 cut(s)	836
HinP1I	GCGC	1 cut(s)	836
HindIII	AAGCTT	1 cut(s)	746
HpaII	CCGG	3 cut(s)	395, 644, 705
HphI	GGTGA	4 cut(s)	158, 764, 1101, 1826
Hpy166II	GTNNAC	3 cut(s)	70, 825, 1591
Hpy8I	GTNNAC	3 cut(s)	70, 825, 1591
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	3 cut(s)	169, 436, 975
HpyCH4III	ACNGT	4 cut(s)	74, 474, 1060, 1429
HpyCH4IV	ACGT	3 cut(s)	195, 1492, 1587
HpyF10VI	GCNNNNNNNGC	5 cut(s)	321, 718, 812, 953, 1222
HpySE526I	ACGT	3 cut(s)	195, 1492, 1587
Hsp92I	GRCGYC	1 cut(s)	1492
Hsp92II	CATG	6 cut(s)	406, 577, 745, 794, 1299, 1916
HspAI	GCGC	1 cut(s)	836
Kzo9I	GATC	3 cut(s)	19, 399, 1761
LguI	GCTCTTC	1 cut(s)	978
LmnI	GCTCC	4 cut(s)	241, 514, 1297, 1902
Lsp1109I	GCAGC	7 cut(s)	802, 820, 886, 1354, 1781, 1870, 1903
LweI	GCATC	4 cut(s)	886, 894, 1003, 1087
MaeI	CTAG	4 cut(s)	1230, 1281, 1617, 1866
MaeII	ACGT	3 cut(s)	195, 1492, 1587
MaeIII	GTNAC	3 cut(s)	146, 1003, 1107
MalI	GATC	3 cut(s)	21, 401, 1763
MbiI	CCGCTC	1 cut(s)	1905
MboI	GATC	3 cut(s)	19, 399, 1761
MfeI	CAATTG	2 cut(s)	504, 1502
MhlI	GDGCHC	4 cut(s)	352, 827, 936, 1603
MlsI	TGGCCA	1 cut(s)	1166
MluCI	AATT	9 cut(s)	11, 31, 180, 504, 867, 1195, 1266, 1502, 1893
MluNI	TGGCCA	1 cut(s)	1166
MlyI	GAGTC	4 cut(s)	143, 328, 494, 1793
MmeI	TCCRAC	2 cut(s)	747, 904
Mox20I	TGGCCA	1 cut(s)	1166
Mph1103I	ATGCAT	1 cut(s)	848
MroXI	GAANNNNTTC	1 cut(s)	446
MscI	TGGCCA	1 cut(s)	1166
MseI	TTAA	2 cut(s)	270, 387
MslI	CAYNNNNRTG	2 cut(s)	281, 795
Msp20I	TGGCCA	1 cut(s)	1166
MspA1I	CMGCKG	1 cut(s)	1539
MspI	CCGG	3 cut(s)	395, 644, 705
MspR9I	CCNGG	5 cut(s)	321, 644, 706, 1143, 1488
MunI	CAATTG	2 cut(s)	504, 1502
Mva1269I	GAATGC	1 cut(s)	472
MvaI	CCWGG	3 cut(s)	321, 1143, 1488
MvnI	CGCG	2 cut(s)	356, 978
MwoI	GCNNNNNNNGC	5 cut(s)	321, 718, 812, 953, 1222
NciI	CCSGG	2 cut(s)	644, 706
NdeII	GATC	3 cut(s)	19, 399, 1761
NlaIII	CATG	6 cut(s)	406, 577, 745, 794, 1299, 1916
NlaIV	GGNNCC	7 cut(s)	76, 316, 370, 616, 996, 1215, 1444
NmuCI	GTSAC	3 cut(s)	146, 1003, 1107
NruI	TCGCGA	2 cut(s)	356, 978
NsiI	ATGCAT	1 cut(s)	848
NspV	TTCGAA	1 cut(s)	724
PciSI	GCTCTTC	1 cut(s)	978
PctI	GAATGC	1 cut(s)	472
PdmI	GAANNNNTTC	1 cut(s)	446
PfeI	GAWTC	8 cut(s)	123, 226, 622, 726, 1322, 1532, 1726, 1817
PfoI	TCCNGGA	1 cut(s)	1486
PkrI	GCNGC	8 cut(s)	711, 817, 835, 901, 1369, 1771, 1860, 1918
PleI	GAGTC	4 cut(s)	143, 328, 494, 1792
PpsI	GAGTC	4 cut(s)	143, 328, 494, 1792
Psp124BI	GAGCTC	1 cut(s)	1603
Psp6I	CCWGG	3 cut(s)	319, 1141, 1486
PspFI	CCCAGC	1 cut(s)	416
PspGI	CCWGG	3 cut(s)	319, 1141, 1486
PspN4I	GGNNCC	7 cut(s)	76, 316, 370, 616, 996, 1215, 1444
PspPI	GGNCC	8 cut(s)	314, 369, 392, 615, 1136, 1214, 1443, 1498
RruI	TCGCGA	2 cut(s)	356, 978
RsaI	GTAC	1 cut(s)	5
RsaNI	GTAC	1 cut(s)	4
RseI	CAYNNNNRTG	2 cut(s)	281, 795
SacI	GAGCTC	1 cut(s)	1603
SapI	GCTCTTC	1 cut(s)	978
SaqAI	TTAA	2 cut(s)	270, 387
SatI	GCNGC	8 cut(s)	710, 816, 834, 900, 1368, 1770, 1859, 1917
Sau3AI	GATC	3 cut(s)	19, 399, 1761
Sau96I	GGNCC	8 cut(s)	314, 369, 392, 615, 1136, 1214, 1443, 1498
SchI	GAGTC	4 cut(s)	143, 328, 494, 1793
ScrFI	CCNGG	5 cut(s)	321, 644, 706, 1143, 1488
SduI	GDGCHC	4 cut(s)	352, 827, 936, 1603
SfaNI	GCATC	4 cut(s)	886, 894, 1003, 1087
SfuI	TTCGAA	1 cut(s)	724
SinI	GGWCC	1 cut(s)	1498
SmiMI	CAYNNNNRTG	2 cut(s)	281, 795
SmlI	CTYRAG	2 cut(s)	713, 1561
SmoI	CTYRAG	2 cut(s)	713, 1561
SpeI	ACTAGT	1 cut(s)	1229
Sse9I	AATT	9 cut(s)	11, 31, 180, 504, 867, 1195, 1266, 1502, 1893
SsiI	CCGC	5 cut(s)	458, 709, 1537, 1828, 1905
SspI	AATATT	1 cut(s)	1548
SspMI	CTAG	4 cut(s)	1230, 1281, 1617, 1866
SstI	GAGCTC	1 cut(s)	1603
StyD4I	CCNGG	5 cut(s)	319, 642, 704, 1141, 1486
StyI	CCWWGG	1 cut(s)	1167
TaaI	ACNGT	4 cut(s)	74, 474, 1060, 1429
TaiI	ACGT	3 cut(s)	198, 1495, 1590
TaqI	TCGA	7 cut(s)	407, 450, 590, 724, 1272, 1320, 1787
TasI	AATT	9 cut(s)	11, 31, 180, 504, 867, 1195, 1266, 1502, 1893
TatI	WGTACW	1 cut(s)	3
TauI	GCSGC	1 cut(s)	712
TfiI	GAWTC	8 cut(s)	123, 226, 622, 726, 1322, 1532, 1726, 1817
Tru1I	TTAA	2 cut(s)	270, 387
Tru9I	TTAA	2 cut(s)	270, 387
TscAI	CASTG	1 cut(s)	832
TseFI	GTSAC	3 cut(s)	146, 1003, 1107
TseI	GCWGC	7 cut(s)	815, 833, 899, 1367, 1769, 1858, 1916
Tsp45I	GTSAC	3 cut(s)	146, 1003, 1107
TspRI	CASTG	1 cut(s)	832
VneI	GTGCAC	1 cut(s)	823
VpaK11BI	GGWCC	1 cut(s)	1498
XapI	RAATTY	2 cut(s)	1195, 1266
XbaI	TCTAGA	1 cut(s)	1865
XmnI	GAANNNNTTC	1 cut(s)	446
XspI	CTAG	4 cut(s)	1230, 1281, 1617, 1866
ZraI	GACGTC	1 cut(s)	1493
Zsp2I	ATGCAT	1 cut(s)	848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.