Belongs to the argonaute family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ArgoN | PF16486 | 174 - 311 | 9.4e-39 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 322 - 371 | 1.9e-19 | Argonaute linker 1 domain |
| PAZ | PF02170 | 389 - 500 | 1.9e-29 | PAZ domain |
| ArgoL2 | PF16488 | 510 - 556 | 2.9e-15 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 566 - 644 | 4.1e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 663 - 978 | 7.9e-108 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 657, 1257 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 279 |
| AccB1I | GGYRCC | 3 cut(s) | 328, 364, 391 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2301 |
| AccBSI | CCGCTC | 2 cut(s) | 299, 452 |
| AccII | CGCG | 7 cut(s) | 119, 132, 138, 195, 357, 1347, 2923 |
| AccIII | TCCGGA | 1 cut(s) | 3013 |
| AclWI | GGATC | 3 cut(s) | 2023, 2045, 2977 |
| AcoI | YGGCCR | 5 cut(s) | 133, 139, 762, 2303, 2458 |
| AcuI | CTGAAG | 6 cut(s) | 621, 1311, 1376, 1964, 2470, 2552 |
| AcyI | GRCGYC | 3 cut(s) | 177, 377, 2291 |
| AfaI | GTAC | 4 cut(s) | 1335, 1355, 1463, 2321 |
| AflIII | ACRYGT | 1 cut(s) | 2847 |
| AgeI | ACCGGT | 1 cut(s) | 346 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 121, 181 |
| AjnI | CCWGG | 6 cut(s) | 283, 496, 669, 1522, 1894, 2677 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 800, 832, 3029 |
| Alw21I | GWGCWC | 2 cut(s) | 1917, 2864 |
| Alw26I | GTCTC | 4 cut(s) | 129, 669, 1276, 1477 |
| Alw44I | GTGCAC | 1 cut(s) | 2860 |
| AlwI | GGATC | 3 cut(s) | 2023, 2045, 2977 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 439, 2684 |
| Ama87I | CYCGRG | 1 cut(s) | 2252 |
| Aor13HI | TCCGGA | 1 cut(s) | 3013 |
| ApaLI | GTGCAC | 1 cut(s) | 2860 |
| ApeKI | GCWGC | 7 cut(s) | 640, 785, 788, 886, 1534, 2087, 2909 |
| AsiGI | ACCGGT | 1 cut(s) | 346 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1116, 2801 |
| AspLEI | GCGC | 5 cut(s) | 30, 111, 1390, 1539, 2923 |
| AsuC2I | CCSGG | 3 cut(s) | 1267, 2253, 2254 |
| AsuHPI | GGTGA | 7 cut(s) | 659, 1016, 1025, 1210, 1255, 2339, 2797 |
| AsuNHI | GCTAGC | 1 cut(s) | 839 |
| AvaI | CYCGRG | 1 cut(s) | 2252 |
| AvaII | GGWCC | 9 cut(s) | 266, 281, 359, 523, 754, 808, 1789, 2389, 2402 |
| AxyI | CCTNAGG | 1 cut(s) | 900 |
| BaeGI | GKGCMC | 2 cut(s) | 2864, 3010 |
| BalI | TGGCCA | 1 cut(s) | 2305 |
| BanI | GGYRCC | 3 cut(s) | 328, 364, 391 |
| BanII | GRGCYC | 1 cut(s) | 214 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1482, 1514 |
| BauI | CACGAG | 1 cut(s) | 1638 |
| BbsI | GAAGAC | 2 cut(s) | 372, 2657 |
| Bbv12I | GWGCWC | 2 cut(s) | 1917, 2864 |
| BbvCI | CCTCAGC | 2 cut(s) | 405, 1367 |
| BbvI | GCAGC | 7 cut(s) | 652, 772, 775, 898, 1546, 2099, 2896 |
| BccI | CCATC | 9 cut(s) | 421, 582, 689, 1010, 1546, 1866, 2250, 2486, 2945 |
| BceAI | ACGGC | 2 cut(s) | 321, 461 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1528, 1562, 2606, 2640 |
| BciT130I | CCWGG | 6 cut(s) | 285, 498, 671, 1524, 1896, 2679 |
| BciVI | GTATCC | 1 cut(s) | 2344 |
| BclI | TGATCA | 4 cut(s) | 1180, 1722, 2421, 2641 |
| BcnI | CCSGG | 3 cut(s) | 1267, 2253, 2254 |
| BcoDI | GTCTC | 4 cut(s) | 129, 669, 1276, 1477 |
| BfaI | CTAG | 8 cut(s) | 270, 548, 840, 1307, 1467, 1938, 2114, 2760 |
| BfmI | CTRYAG | 2 cut(s) | 1153, 2973 |
| BfoI | RGCGCY | 1 cut(s) | 112 |
| BfuI | GTATCC | 1 cut(s) | 2344 |
| BglII | AGATCT | 3 cut(s) | 568, 1250, 2368 |
| Bme1390I | CCNGG | 9 cut(s) | 285, 498, 671, 1267, 1524, 1896, 2253, 2254, 2679 |
| Bme18I | GGWCC | 9 cut(s) | 266, 281, 359, 523, 754, 808, 1789, 2389, 2402 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 121, 181 |
| BmeT110I | CYCGRG | 1 cut(s) | 2252 |
| BmrFI | CCNGG | 9 cut(s) | 285, 498, 671, 1267, 1524, 1896, 2253, 2254, 2679 |
| BmrI | ACTGGG | 1 cut(s) | 1057 |
| BmsI | GCATC | 6 cut(s) | 617, 2099, 2164, 2530, 2626, 2803 |
| BmtI | GCTAGC | 1 cut(s) | 843 |
| BmuI | ACTGGG | 1 cut(s) | 1057 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1677 |
| BpiI | GAAGAC | 2 cut(s) | 372, 2657 |
| BpmI | CTGGAG | 3 cut(s) | 87, 1051, 1545 |
| Bpu10I | CCTNAGC | 4 cut(s) | 372, 405, 1286, 1367 |
| BpuEI | CTTGAG | 3 cut(s) | 297, 815, 2114 |
| BpuMI | CCSGG | 3 cut(s) | 1267, 2253, 2254 |
| BsaAI | YACGTR | 1 cut(s) | 2850 |
| BsaBI | GATNNNNATC | 2 cut(s) | 573, 1185 |
| BsaHI | GRCGYC | 3 cut(s) | 177, 377, 2291 |
| BsaI | GGTCTC | 1 cut(s) | 1276 |
| BsaWI | WCCGGW | 4 cut(s) | 346, 480, 2404, 3013 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 439, 469 |
| Bse118I | RCCGGY | 5 cut(s) | 233, 325, 346, 361, 367 |
| Bse1I | ACTGG | 9 cut(s) | 48, 757, 1034, 1063, 1681, 2017, 2461, 2509, 2588 |
| Bse21I | CCTNAGG | 1 cut(s) | 900 |
| Bse3DI | GCAATG | 2 cut(s) | 1386, 1718 |
| Bse8I | GATNNNNATC | 2 cut(s) | 573, 1185 |
| BseAI | TCCGGA | 1 cut(s) | 3013 |
| BseBI | CCWGG | 6 cut(s) | 285, 498, 671, 1524, 1896, 2679 |
| BseGI | GGATG | 6 cut(s) | 1378, 1858, 1891, 2242, 2545, 2707 |
| BseJI | GATNNNNATC | 2 cut(s) | 573, 1185 |
| BseMI | GCAATG | 2 cut(s) | 1386, 1718 |
| BseNI | ACTGG | 9 cut(s) | 48, 757, 1034, 1063, 1681, 2017, 2461, 2509, 2588 |
| BseRI | GAGGAG | 5 cut(s) | 24, 42, 216, 402, 444 |
| BseSI | GKGCMC | 2 cut(s) | 2864, 3010 |
| BseX3I | CGGCCG | 2 cut(s) | 133, 139 |
| BseXI | GCAGC | 7 cut(s) | 652, 772, 775, 898, 1546, 2099, 2896 |
| BseYI | CCCAGC | 2 cut(s) | 685, 1451 |
| BsgI | GTGCAG | 1 cut(s) | 2627 |
| Bsh1236I | CGCG | 7 cut(s) | 119, 132, 138, 195, 357, 1347, 2923 |
| Bsh1285I | CGRYCG | 2 cut(s) | 136, 142 |
| BshNI | GGYRCC | 3 cut(s) | 328, 364, 391 |
| BshTI | ACCGGT | 1 cut(s) | 346 |
| BsiEI | CGRYCG | 2 cut(s) | 136, 142 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1917, 2864 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2252 |
| BslFI | GGGAC | 3 cut(s) | 237, 279, 821 |
| BsmAI | GTCTC | 4 cut(s) | 129, 669, 1276, 1477 |
| BsmFI | GGGAC | 3 cut(s) | 237, 279, 821 |
| BsmI | GAATGC | 1 cut(s) | 2748 |
| Bso31I | GGTCTC | 1 cut(s) | 1276 |
| BsoBI | CYCGRG | 1 cut(s) | 2252 |
| Bsp1286I | GDGCHC | 4 cut(s) | 214, 1917, 2864, 3010 |
| Bsp13I | TCCGGA | 1 cut(s) | 3013 |
| Bsp19I | CCATGG | 1 cut(s) | 2295 |
| Bsp68I | TCGCGA | 1 cut(s) | 1347 |
| BspEI | TCCGGA | 1 cut(s) | 3013 |
| BspFNI | CGCG | 7 cut(s) | 119, 132, 138, 195, 357, 1347, 2923 |
| BspHI | TCATGA | 1 cut(s) | 1183 |
| BspOI | GCTAGC | 1 cut(s) | 843 |
| BspPI | GGATC | 3 cut(s) | 2023, 2045, 2977 |
| BspQI | GCTCTTC | 1 cut(s) | 1503 |
| BspT107I | GGYRCC | 3 cut(s) | 328, 364, 391 |
| BspTNI | GGTCTC | 1 cut(s) | 1276 |
| BsrBI | CCGCTC | 2 cut(s) | 299, 452 |
| BsrDI | GCAATG | 2 cut(s) | 1386, 1718 |
| BsrFI | RCCGGY | 5 cut(s) | 233, 325, 346, 361, 367 |
| BsrI | ACTGG | 9 cut(s) | 48, 757, 1034, 1063, 1681, 2017, 2461, 2509, 2588 |
| BssAI | RCCGGY | 5 cut(s) | 233, 325, 346, 361, 367 |
| BssNI | GRCGYC | 3 cut(s) | 177, 377, 2291 |
| BssSI | CACGAG | 1 cut(s) | 1638 |
| BssT1I | CCWWGG | 2 cut(s) | 2082, 2295 |
| Bst2BI | CACGAG | 1 cut(s) | 1638 |
| Bst2UI | CCWGG | 6 cut(s) | 285, 498, 671, 1524, 1896, 2679 |
| Bst6I | CTCTTC | 2 cut(s) | 1503, 1983 |
| BstACI | GRCGYC | 3 cut(s) | 177, 377, 2291 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 895, 1385, 2897 |
| BstBAI | YACGTR | 1 cut(s) | 2850 |
| BstC8I | GCNNGC | 8 cut(s) | 327, 721, 841, 884, 1386, 2746, 2765, 2769 |
| BstDSI | CCRYGG | 4 cut(s) | 136, 214, 1275, 2295 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 551, 2397 |
| BstF5I | GGATG | 6 cut(s) | 1378, 1858, 1891, 2242, 2545, 2707 |
| BstFNI | CGCG | 7 cut(s) | 119, 132, 138, 195, 357, 1347, 2923 |
| BstH2I | RGCGCY | 1 cut(s) | 112 |
| BstHHI | GCGC | 5 cut(s) | 30, 111, 1390, 1539, 2923 |
| BstMAI | GTCTC | 4 cut(s) | 129, 669, 1276, 1477 |
| BstMCI | CGRYCG | 2 cut(s) | 136, 142 |
| BstNI | CCWGG | 6 cut(s) | 285, 498, 671, 1524, 1896, 2679 |
| BstNSI | RCATGY | 1 cut(s) | 1770 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1677 |
| BstSCI | CCNGG | 9 cut(s) | 283, 496, 669, 1265, 1522, 1894, 2251, 2252, 2677 |
| BstSFI | CTRYAG | 2 cut(s) | 1153, 2973 |
| BstSLI | GKGCMC | 2 cut(s) | 2864, 3010 |
| BstUI | CGCG | 7 cut(s) | 119, 132, 138, 195, 357, 1347, 2923 |
| BstV1I | GCAGC | 7 cut(s) | 652, 772, 775, 898, 1546, 2099, 2896 |
| BstV2I | GAAGAC | 2 cut(s) | 372, 2657 |
| BstX2I | RGATCY | 5 cut(s) | 568, 1250, 2037, 2368, 2969 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1598, 1676 |
| BstYI | RGATCY | 5 cut(s) | 568, 1250, 2037, 2368, 2969 |
| BstZI | CGGCCG | 2 cut(s) | 133, 139 |
| Bsu36I | CCTNAGG | 1 cut(s) | 900 |
| BsuI | GTATCC | 1 cut(s) | 2344 |
| BtgI | CCRYGG | 4 cut(s) | 136, 214, 1275, 2295 |
| BtgZI | GCGATG | 2 cut(s) | 134, 440 |
| BtsCI | GGATG | 6 cut(s) | 1378, 1858, 1891, 2242, 2545, 2707 |
| BtsIMutI | CAGTG | 6 cut(s) | 41, 957, 1674, 2075, 2160, 2383 |
| BtuMI | TCGCGA | 1 cut(s) | 1347 |
| Cac8I | GCNNGC | 8 cut(s) | 327, 721, 841, 884, 1386, 2746, 2765, 2769 |
| CaiI | CAGNNNCTG | 2 cut(s) | 439, 2684 |
| CciI | TCATGA | 1 cut(s) | 1183 |
| CciNI | GCGGCCGC | 1 cut(s) | 133 |
| CfoI | GCGC | 5 cut(s) | 30, 111, 1390, 1539, 2923 |
| Cfr10I | RCCGGY | 5 cut(s) | 233, 325, 346, 361, 367 |
| Cfr42I | CCGCGG | 1 cut(s) | 139 |
| Cfr9I | CCCGGG | 1 cut(s) | 2252 |
| CpoI | CGGWCCG | 1 cut(s) | 359 |
| CseI | GACGC | 6 cut(s) | 125, 185, 366, 451, 914, 2280 |
| Csp6I | GTAC | 4 cut(s) | 1334, 1354, 1462, 2320 |
| CspAI | ACCGGT | 1 cut(s) | 346 |
| CspI | CGGWCCG | 1 cut(s) | 359 |
| CviQI | GTAC | 4 cut(s) | 1334, 1354, 1462, 2320 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 279 |
| DriI | GACNNNNNGTC | 2 cut(s) | 121, 181 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 279 |
| EaeI | YGGCCR | 5 cut(s) | 133, 139, 762, 2303, 2458 |
| EagI | CGGCCG | 2 cut(s) | 133, 139 |
| Eam1104I | CTCTTC | 2 cut(s) | 1503, 1983 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 121, 181 |
| EarI | CTCTTC | 2 cut(s) | 1503, 1983 |
| EciI | GGCGGA | 1 cut(s) | 222 |
| EclXI | CGGCCG | 2 cut(s) | 133, 139 |
| Eco130I | CCWWGG | 2 cut(s) | 2082, 2295 |
| Eco147I | AGGCCT | 3 cut(s) | 496, 1171, 1208 |
| Eco24I | GRGCYC | 1 cut(s) | 214 |
| Eco31I | GGTCTC | 1 cut(s) | 1276 |
| Eco32I | GATATC | 2 cut(s) | 1924, 2579 |
| Eco47I | GGWCC | 9 cut(s) | 266, 281, 359, 523, 754, 808, 1789, 2389, 2402 |
| Eco52I | CGGCCG | 2 cut(s) | 133, 139 |
| Eco57I | CTGAAG | 6 cut(s) | 621, 1311, 1376, 1964, 2470, 2552 |
| Eco81I | CCTNAGG | 1 cut(s) | 900 |
| Eco88I | CYCGRG | 1 cut(s) | 2252 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 551, 2397 |
| EcoO109I | RGGNCCY | 3 cut(s) | 266, 722, 2389 |
| EcoRII | CCWGG | 6 cut(s) | 283, 496, 669, 1522, 1894, 2677 |
| EcoRV | GATATC | 2 cut(s) | 1924, 2579 |
| EcoT14I | CCWWGG | 2 cut(s) | 2082, 2295 |
| EcoT38I | GRGCYC | 1 cut(s) | 214 |
| ErhI | CCWWGG | 2 cut(s) | 2082, 2295 |
| FaqI | GGGAC | 3 cut(s) | 237, 279, 821 |
| FauI | CCCGC | 2 cut(s) | 409, 2776 |
| FauNDI | CATATG | 1 cut(s) | 2020 |
| FbaI | TGATCA | 4 cut(s) | 1180, 1722, 2421, 2641 |
| FokI | GGATG | 6 cut(s) | 1385, 1845, 1878, 2229, 2552, 2694 |
| FriOI | GRGCYC | 1 cut(s) | 214 |
| FspBI | CTAG | 8 cut(s) | 270, 548, 840, 1307, 1467, 1938, 2114, 2760 |
| GlaI | GCGC | 5 cut(s) | 29, 110, 1389, 1538, 2922 |
| GsaI | CCCAGC | 2 cut(s) | 689, 1455 |
| GsuI | CTGGAG | 3 cut(s) | 87, 1051, 1545 |
| HaeII | RGCGCY | 1 cut(s) | 112 |
| HgaI | GACGC | 6 cut(s) | 125, 185, 366, 451, 914, 2280 |
| HhaI | GCGC | 5 cut(s) | 30, 111, 1390, 1539, 2923 |
| Hin1I | GRCGYC | 3 cut(s) | 177, 377, 2291 |
| Hin6I | GCGC | 5 cut(s) | 28, 109, 1388, 1537, 2921 |
| HinP1I | GCGC | 5 cut(s) | 28, 109, 1388, 1537, 2921 |
| HincII | GTYRAC | 4 cut(s) | 1296, 1517, 1741, 2692 |
| HindII | GTYRAC | 4 cut(s) | 1296, 1517, 1741, 2692 |
| HindIII | AAGCTT | 1 cut(s) | 650 |
| HinfI | GANTC | 9 cut(s) | 260, 288, 662, 681, 1048, 1112, 1406, 2191, 2802 |
| HpaI | GTTAAC | 1 cut(s) | 1741 |
| HphI | GGTGA | 7 cut(s) | 659, 1016, 1025, 1210, 1255, 2339, 2797 |
| Hpy166II | GTNNAC | 9 cut(s) | 1296, 1302, 1464, 1517, 1559, 1741, 2105, 2692, 2862 |
| Hpy8I | GTNNAC | 9 cut(s) | 1296, 1302, 1464, 1517, 1559, 1741, 2105, 2692, 2862 |
| Hpy99I | CGWCG | 6 cut(s) | 179, 307, 466, 469, 472, 2716 |
| HpyCH4IV | ACGT | 3 cut(s) | 924, 1298, 2849 |
| HpySE526I | ACGT | 3 cut(s) | 924, 1298, 2849 |
| Hsp92I | GRCGYC | 3 cut(s) | 177, 377, 2291 |
| HspAI | GCGC | 5 cut(s) | 28, 109, 1388, 1537, 2921 |
| Kpn2I | TCCGGA | 1 cut(s) | 3013 |
| KroI | GCCGGC | 1 cut(s) | 325 |
| KroNI | GCCGGC | 1 cut(s) | 327 |
| Ksp22I | TGATCA | 4 cut(s) | 1180, 1722, 2421, 2641 |
| KspAI | GTTAAC | 1 cut(s) | 1741 |
| KspI | CCGCGG | 1 cut(s) | 139 |
| LguI | GCTCTTC | 1 cut(s) | 1503 |
| Lsp1109I | GCAGC | 7 cut(s) | 652, 772, 775, 898, 1546, 2099, 2896 |
| LweI | GCATC | 6 cut(s) | 617, 2099, 2164, 2530, 2626, 2803 |
| MaeI | CTAG | 8 cut(s) | 270, 548, 840, 1307, 1467, 1938, 2114, 2760 |
| MaeII | ACGT | 3 cut(s) | 924, 1298, 2849 |
| MbiI | CCGCTC | 2 cut(s) | 299, 452 |
| MfeI | CAATTG | 1 cut(s) | 2274 |
| MflI | RGATCY | 5 cut(s) | 568, 1250, 2037, 2368, 2969 |
| MhlI | GDGCHC | 4 cut(s) | 214, 1917, 2864, 3010 |
| MlsI | TGGCCA | 1 cut(s) | 2305 |
| MluNI | TGGCCA | 1 cut(s) | 2305 |
| MlyI | GAGTC | 3 cut(s) | 297, 671, 1057 |
| MmeI | TCCRAC | 4 cut(s) | 198, 326, 889, 2735 |
| Mox20I | TGGCCA | 1 cut(s) | 2305 |
| MroI | TCCGGA | 1 cut(s) | 3013 |
| MroNI | GCCGGC | 1 cut(s) | 325 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1116, 2801 |
| MscI | TGGCCA | 1 cut(s) | 2305 |
| MslI | CAYNNNNRTG | 3 cut(s) | 582, 2202, 2778 |
| Msp20I | TGGCCA | 1 cut(s) | 2305 |
| MspA1I | CMGCKG | 2 cut(s) | 138, 404 |
| MspR9I | CCNGG | 9 cut(s) | 285, 498, 671, 1267, 1524, 1896, 2253, 2254, 2679 |
| MunI | CAATTG | 1 cut(s) | 2274 |
| Mva1269I | GAATGC | 1 cut(s) | 2748 |
| MvaI | CCWGG | 6 cut(s) | 285, 498, 671, 1524, 1896, 2679 |
| MvnI | CGCG | 7 cut(s) | 119, 132, 138, 195, 357, 1347, 2923 |
| NaeI | GCCGGC | 1 cut(s) | 327 |
| NciI | CCSGG | 3 cut(s) | 1267, 2253, 2254 |
| NcoI | CCATGG | 1 cut(s) | 2295 |
| NdeI | CATATG | 1 cut(s) | 2020 |
| NgoMIV | GCCGGC | 1 cut(s) | 325 |
| NheI | GCTAGC | 1 cut(s) | 839 |
| NmeAIII | GCCGAG | 3 cut(s) | 167, 368, 790 |
| NmuCI | GTSAC | 4 cut(s) | 823, 2124, 2204, 2311 |
| NotI | GCGGCCGC | 1 cut(s) | 133 |
| NruI | TCGCGA | 1 cut(s) | 1347 |
| NspI | RCATGY | 1 cut(s) | 1770 |
| PagI | TCATGA | 1 cut(s) | 1183 |
| PceI | AGGCCT | 3 cut(s) | 496, 1171, 1208 |
| PciSI | GCTCTTC | 1 cut(s) | 1503 |
| PctI | GAATGC | 1 cut(s) | 2748 |
| PdiI | GCCGGC | 1 cut(s) | 327 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1116, 2801 |
| PfeI | GAWTC | 6 cut(s) | 260, 681, 1112, 1406, 2191, 2802 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2301 |
| PfoI | TCCNGGA | 1 cut(s) | 283 |
| PinAI | ACCGGT | 1 cut(s) | 346 |
| PleI | GAGTC | 3 cut(s) | 296, 670, 1056 |
| PpsI | GAGTC | 3 cut(s) | 296, 670, 1056 |
| Ppu21I | YACGTR | 1 cut(s) | 2850 |
| PpuMI | RGGWCCY | 2 cut(s) | 266, 2389 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1677 |
| PsiI | TTATAA | 2 cut(s) | 657, 1257 |
| Psp5II | RGGWCCY | 2 cut(s) | 266, 2389 |
| Psp6I | CCWGG | 6 cut(s) | 283, 496, 669, 1522, 1894, 2677 |
| PspFI | CCCAGC | 2 cut(s) | 685, 1451 |
| PspGI | CCWGG | 6 cut(s) | 283, 496, 669, 1522, 1894, 2677 |
| PspPPI | RGGWCCY | 2 cut(s) | 266, 2389 |
| PstNI | CAGNNNCTG | 2 cut(s) | 439, 2684 |
| PsuI | RGATCY | 5 cut(s) | 568, 1250, 2037, 2368, 2969 |
| RruI | TCGCGA | 1 cut(s) | 1347 |
| RsaI | GTAC | 4 cut(s) | 1335, 1355, 1463, 2321 |
| RsaNI | GTAC | 4 cut(s) | 1334, 1354, 1462, 2320 |
| RseI | CAYNNNNRTG | 3 cut(s) | 582, 2202, 2778 |
| Rsr2I | CGGWCCG | 1 cut(s) | 359 |
| RsrII | CGGWCCG | 1 cut(s) | 359 |
| SacII | CCGCGG | 1 cut(s) | 139 |
| SapI | GCTCTTC | 1 cut(s) | 1503 |
| SchI | GAGTC | 3 cut(s) | 297, 671, 1057 |
| ScrFI | CCNGG | 9 cut(s) | 285, 498, 671, 1267, 1524, 1896, 2253, 2254, 2679 |
| SduI | GDGCHC | 4 cut(s) | 214, 1917, 2864, 3010 |
| SfaNI | GCATC | 6 cut(s) | 617, 2099, 2164, 2530, 2626, 2803 |
| SfcI | CTRYAG | 2 cut(s) | 1153, 2973 |
| Sfr303I | CCGCGG | 1 cut(s) | 139 |
| SgrAI | CRCCGGYG | 1 cut(s) | 233 |
| SgrBI | CCGCGG | 1 cut(s) | 139 |
| SinI | GGWCC | 9 cut(s) | 266, 281, 359, 523, 754, 808, 1789, 2389, 2402 |
| SmaI | CCCGGG | 1 cut(s) | 2254 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 582, 2202, 2778 |
| SmlI | CTYRAG | 3 cut(s) | 312, 830, 2129 |
| SmoI | CTYRAG | 3 cut(s) | 312, 830, 2129 |
| SseBI | AGGCCT | 3 cut(s) | 496, 1171, 1208 |
| SspI | AATATT | 3 cut(s) | 1360, 2223, 2671 |
| SspMI | CTAG | 8 cut(s) | 270, 548, 840, 1307, 1467, 1938, 2114, 2760 |
| StuI | AGGCCT | 3 cut(s) | 496, 1171, 1208 |
| StyD4I | CCNGG | 9 cut(s) | 283, 496, 669, 1265, 1522, 1894, 2251, 2252, 2677 |
| StyI | CCWWGG | 2 cut(s) | 2082, 2295 |
| TaiI | ACGT | 3 cut(s) | 927, 1301, 2852 |
| TaqI | TCGA | 6 cut(s) | 470, 590, 611, 740, 1548, 1750 |
| TaqII | GACCGA | 2 cut(s) | 825, 2669 |
| TatI | WGTACW | 1 cut(s) | 1333 |
| TfiI | GAWTC | 6 cut(s) | 260, 681, 1112, 1406, 2191, 2802 |
| TscAI | CASTG | 6 cut(s) | 48, 964, 1681, 2075, 2167, 2383 |
| TseFI | GTSAC | 4 cut(s) | 823, 2124, 2204, 2311 |
| TseI | GCWGC | 7 cut(s) | 640, 785, 788, 886, 1534, 2087, 2909 |
| Tsp45I | GTSAC | 4 cut(s) | 823, 2124, 2204, 2311 |
| TspDTI | ATGAA | 5 cut(s) | 716, 1125, 1590, 1619, 2547 |
| TspGWI | ACGGA | 6 cut(s) | 1264, 2050, 2662, 2729, 2906, 2993 |
| TspMI | CCCGGG | 1 cut(s) | 2252 |
| TspRI | CASTG | 6 cut(s) | 48, 964, 1681, 2075, 2167, 2383 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2301 |
| VneI | GTGCAC | 1 cut(s) | 2860 |
| VpaK11BI | GGWCC | 9 cut(s) | 266, 281, 359, 523, 754, 808, 1789, 2389, 2402 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 551, 2397 |
| XbaI | TCTAGA | 1 cut(s) | 1306 |
| XceI | RCATGY | 1 cut(s) | 1770 |
| XmaI | CCCGGG | 1 cut(s) | 2252 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1116, 2801 |
| XspI | CTAG | 8 cut(s) | 270, 548, 840, 1307, 1467, 1938, 2114, 2760 |