Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001300

Physical Location & Seq

Genomic Coordinates Reverse (-)

59412748 .. 59416580

Gene Structure 3833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ33292

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGAATCCATGCCAGTAATTGCTGAAGATGTGTCAGCGAGATCTTTTTTTGAACCCATTTTGGTGACTGAGTTTCTTGCTAAACATTTTTACCACACTGATCGTTCCAAGCATTTGCCTGATCGTGATTGTATAAAGGTGAAGAAAACCTTGAAGCGGGTCAAGGTAGAAGTTCGTTTAAGGGACTGGACCAAAAACGAAGAAGTTAAGAGAACTTACACAATCAATGGACTATCTGCAGAACCATTGGAACAGTTAAGGTTTACTTGTGAAGATGAGAACACATCAGTTGTGCAATATTATCGTAAGAAGTACAAGATTGATCTCAAATATGTAGCTTGGCCAGCCATTCAAGCTGGCAATGATTCAAAACCCGTATACTTGCCTATGGAGCTTTGCTCAATTGTTGCTGGGCAGAGATACACAAAGAAACTGAATAAAAAACAAGTCACTAACTTACTAAAAGCAACTTGTCAACGTCCTCGGGACAGGGAAAATAATATAACACAGATGATTAGGGAGAAAACCAACAATAGAGACGATAAAGAATCTCTTATAAGGAGGGAATTTGGATTACAAGTGAGAGAGGAAATGGCATTGGTTAAAGCTCGAGTTTTACCATCTCCACTGCTTAAATACCATGACAGTGGTCGTGAAAAGAGTGTTTATCCCCAGATGGGGCAGTGGAACATGGCAAACAAGAAAATGGTCAATGGAGGTAGATTGCAAGTCTGGGCATTTGTCAATTTCTCCAGAGTATCCCAAGATATTACTTTTGAGTTTCTTTGGGCTTTGGTTGATGTGTGCAACAGTAAGGGGATGGAGTTTTCTCCCCAACCCTTGCTTCCAGTACAGTTTTCTCATCCTGCACAAATTGAGAGGGTACTCAGGGATATTCACAAGTTGTCTGATCAGAAAGGACGACAACTTCAGTTATTGATTGTCATTTTGCCTGATCAAAGTGATTCATCTTATGGGAAGATCAAACGAACCTGTGAAACAGAATTAGGAATTGTGTCTCAGTGCTTAGAGCCCCAGAAAATAAAAAGGTGGAATACACAATATTTGGAAAATCTTGCCCTTAAGATCAATGTGAAGGTTGGTGGACGAAACACTGTTTTAAATGATGCAATTTATAAGAAGATGCCTGTTGTGACCGATCGCTTGCCCACAATTATATTTGGAGCAGATGTTACTCATCCAGCAGCCGGGGATGACAGTAGCCCATCAATAGCAGCAGTCGTTGCCTCAACGGATTGGCCAGAGGTCACAAACTACAGAGCAATTGTTTCGGCGCAGCATCACCGCGATGAAATAATCGAAGATCTCTATAAATCACACAAATCTGAGAAGGGTTTGGTTCATGGAGGAATGATAAGGGAACTTCTCGTTGCCTTCTACAGACAAAAAAGATTAAAGCCGTCGAGAATTATATTCTACAGAGATGGGGTTAGTGAAGGCCAGTTCAGTCAAGTTCTGTTACATGAGGTGGATGCTATAAGAAGGGCCTGTGCCTCTTTGGAGGAAGGATATATGCCAACAGTAACGTTTGTGGTGGTACAGAAAAGGCATCATACTCGCCTTTTCCCTGCTGATCATAGCAATCGTGGTCAGATGGACAGGAGTGGCAATATTCAACCAGGTACTGTTGTTGACACCGAGATTTGCCACCCTACAGAATTTGACTTTTATCTCAACAGTCATGCTGGAATCCAGGGAACGAGCCGTCCAGCACACTACCATGTTTTGTTTGACGAAAACAGATTCACTGCCGATGGTTTGCAAGTTTTAACAAACAATTTATGTTATACGTACGCAAGGTGCACCCGATCGGTTTCTATAGTGCCACCTGCTTACTATGCTCATCTGGTAGCTTTTCGAGCACGGCATTACATTGAGGGTGACTCATCCGATGGAGGTTCTACAACTGGTGGGGGTGCACAGGTTCTCCGAGCCCTTCCGGAGATCAAAGAAAATGTGAAAGAAGTGATGTTTTATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009814 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016441 GO:0016458 GO:0019222 GO:0035821 GO:0040029 GO:0043207 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048519 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052018 GO:0052249 GO:0060145 GO:0060255 GO:0065007 GO:0098542 GO:0098586

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

667

Amino Acids

76.37

Weight (kDa)

9.11

Isoelectric Point (pI)

49.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAZ	PF02170	42 - 153	1.3e-25	PAZ domain
ArgoL2	PF16488	163 - 213	6.3e-10	Argonaute linker 2 domain
ArgoMid	PF16487	224 - 301	6.7e-10	Mid domain of argonaute
Piwi	PF02171	313 - 632	1.7e-108	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27880
fragaria_vesca	FvH4_3g30201 FvH4_3g30202
malus_domestica	MD03G1130600.v1.1 MD03G1254500.v1.1 MD11G1152200.v1.1 MD11G1152400.v1.1
prunus_persica	Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1
pyrus_communis	pycom01g05040 pycom11g12470
rosa_chinensis	RchiOBHm_Chr1g0362621 RchiOBHm_Chr5g0055991 RchiOBHm_Chr5g0056001 RchiOBHm_Chr5g0056021 RchiOBHm_Chr5g0056031 RchiOBHm_Chr5g0056051 RchiOBHm_Chr5g0056071 RchiOBHm_Chr5g0056081 RchiOBHm_Chr5g0056091
rosa_laevigata	RLG00000027633 RLG00000035041 RLG00000035044 RLG00000035045 RLG00000035046
rosa_roxburghii	Rroxscaffold_1G00024210 Rroxscaffold_1G00024220
rosa_rugosa	Rorug05G0297000 Rorug05G0297100 Rorug05G0297200 Rorug05G0297300 Rorug05G0297300 Rorug05G0297400
rosa_samantha	Rh1CG289700 Rh1DG302900 Rh5AG368000 Rh5AG368200 Rh5AG368300 Rh5CG401800 Rh5CG402100 Rh5CG402200 Rh5DG391500 Rh5DG391600 Rh5DG391700
rosa_wichuraiana	Rw0G004500 Rw1G027430 Rw5G034540 Rw5G034570 Rw5G034580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	557, 1137
AarI	CACCTGC	1 cut(s)	1858
Acc36I	ACCTGC	1 cut(s)	1858
AccI	GTMKAC	1 cut(s)	378
AccII	CGCG	1 cut(s)	1308
AccIII	TCCGGA	1 cut(s)	1960
AciI	CCGC	2 cut(s)	157, 1306
AclI	AACGTT	1 cut(s)	1547
AcoI	YGGCCR	2 cut(s)	341, 1259
AcsI	RAATTY	2 cut(s)	566, 1679
AcuI	CTGAAG	2 cut(s)	45, 914
AfaI	GTAC	6 cut(s)	314, 852, 885, 1560, 1645, 1814
AfiI	CCNNNNNNNGG	4 cut(s)	156, 677, 678, 1208
AflII	CTTAAG	1 cut(s)	1082
AgsI	TTSAA	5 cut(s)	53, 154, 353, 369, 1637
AjnI	CCWGG	2 cut(s)	1639, 1713
AjuI	GAANNNNNNNTTGG	2 cut(s)	828, 860
AloI	GAACNNNNNNTCC	2 cut(s)	1711, 1743
AluBI	AGCT	5 cut(s)	338, 356, 394, 608, 1874
AluI	AGCT	5 cut(s)	338, 356, 394, 608, 1874
Alw21I	GWGCWC	3 cut(s)	1826, 1885, 1942
Alw26I	GTCTC	2 cut(s)	531, 1023
Alw44I	GTGCAC	2 cut(s)	1822, 1938
AlwNI	CAGNNNCTG	1 cut(s)	1646
Ama87I	CYCGRG	2 cut(s)	483, 609
Aor13HI	TCCGGA	1 cut(s)	1960
AoxI	GGCC	4 cut(s)	341, 1259, 1459, 1506
ApaLI	GTGCAC	2 cut(s)	1822, 1938
ApeKI	GCWGC	3 cut(s)	1205, 1235, 1297
ApoI	RAATTY	2 cut(s)	566, 1679
AspLEI	GCGC	1 cut(s)	1297
AspS9I	GGNCC	2 cut(s)	189, 1506
AsuC2I	CCSGG	1 cut(s)	1210
AsuHPI	GGTGA	4 cut(s)	76, 151, 1295, 1913
AvaI	CYCGRG	2 cut(s)	483, 609
AvaII	GGWCC	1 cut(s)	189
BaeGI	GKGCMC	2 cut(s)	1826, 1942
BaeI	ACNNNNGTAYC	2 cut(s)	1635, 1668
BalI	TGGCCA	2 cut(s)	343, 1261
BanII	GRGCYC	2 cut(s)	1035, 1957
Bbv12I	GWGCWC	3 cut(s)	1826, 1885, 1942
BbvI	GCAGC	3 cut(s)	1217, 1247, 1309
BccI	CCATC	8 cut(s)	628, 670, 814, 1234, 1439, 1609, 1769, 1907
BceAI	ACGGC	3 cut(s)	1405, 1710, 1901
BcgI	CGANNNNNNTGC	6 cut(s)	284, 318, 1272, 1306, 1559, 1593
BciT130I	CCWGG	2 cut(s)	1641, 1715
BciVI	GTATCC	1 cut(s)	769
BclI	TGATCA	3 cut(s)	910, 955, 1594
BcnI	CCSGG	1 cut(s)	1210
BcoDI	GTCTC	2 cut(s)	531, 1023
BfmI	CTRYAG	6 cut(s)	237, 1276, 1399, 1438, 1674, 1839
BfrI	CTTAAG	1 cut(s)	1082
BfuAI	ACCTGC	1 cut(s)	1858
BfuI	GTATCC	1 cut(s)	769
BglII	AGATCT	2 cut(s)	41, 1324
BisI	GCNGC	3 cut(s)	1206, 1236, 1298
BlsI	GCNGC	3 cut(s)	1207, 1237, 1299
Bme1390I	CCNGG	3 cut(s)	1210, 1641, 1715
Bme18I	GGWCC	1 cut(s)	189
BmeT110I	CYCGRG	2 cut(s)	483, 609
BmgT120I	GGNCC	2 cut(s)	189, 1506
BmrFI	CCNGG	3 cut(s)	1210, 1641, 1715
BmsI	GCATC	5 cut(s)	1117, 1134, 1309, 1483, 1579
BoxI	GACNNNNGTC	1 cut(s)	648
BplI	GAGNNNNNCTC	4 cut(s)	383, 415, 1889, 1921
BpmI	CTGGAG	1 cut(s)	736
BpuMI	CCSGG	1 cut(s)	1210
BsaAI	YACGTR	1 cut(s)	1812
BsaJI	CCNNGG	3 cut(s)	482, 1209, 1714
BsaWI	WCCGGW	1 cut(s)	1960
BsaXI	ACNNNNNCTCC	4 cut(s)	1176, 1206, 1932, 1962
Bsc4I	CCNNNNNNNGG	4 cut(s)	156, 677, 678, 1208
Bse1I	ACTGG	5 cut(s)	14, 191, 848, 1462, 1933
Bse3DI	GCAATG	1 cut(s)	367
BseAI	TCCGGA	1 cut(s)	1960
BseBI	CCWGG	2 cut(s)	1641, 1715
BseDI	CCNNGG	3 cut(s)	482, 1209, 1714
BseGI	GGATG	6 cut(s)	825, 862, 1198, 1219, 1498, 1907
BseLI	CCNNNNNNNGG	4 cut(s)	156, 677, 678, 1208
BseMI	GCAATG	1 cut(s)	367
BseMII	CTCAG	4 cut(s)	60, 901, 1034, 1338
BseNI	ACTGG	5 cut(s)	14, 191, 848, 1462, 1933
BseSI	GKGCMC	2 cut(s)	1826, 1942
BseXI	GCAGC	3 cut(s)	1217, 1247, 1309
BseYI	CCCAGC	1 cut(s)	410
BsgI	GTGCAG	1 cut(s)	852
Bsh1236I	CGCG	1 cut(s)	1308
Bsh1285I	CGRYCG	2 cut(s)	1162, 1832
BshFI	GGCC	4 cut(s)	343, 1261, 1461, 1508
BsiEI	CGRYCG	2 cut(s)	1162, 1832
BsiHKAI	GWGCWC	3 cut(s)	1826, 1885, 1942
BsiHKCI	CYCGRG	2 cut(s)	483, 609
BsiSI	CCGG	2 cut(s)	1209, 1961
BsiWI	CGTACG	1 cut(s)	1812
BslFI	GGGAC	2 cut(s)	197, 500
BslI	CCNNNNNNNGG	4 cut(s)	156, 677, 678, 1208
BsmAI	GTCTC	2 cut(s)	531, 1023
BsmBI	CGTCTC	1 cut(s)	531
BsmFI	GGGAC	2 cut(s)	197, 500
BsnI	GGCC	4 cut(s)	343, 1261, 1461, 1508
BsoBI	CYCGRG	2 cut(s)	483, 609
Bsp1286I	GDGCHC	5 cut(s)	1035, 1826, 1885, 1942, 1957
Bsp13I	TCCGGA	1 cut(s)	1960
BspACI	CCGC	2 cut(s)	157, 1306
BspANI	GGCC	4 cut(s)	343, 1261, 1461, 1508
BspCNI	CTCAG	4 cut(s)	61, 900, 1033, 1339
BspEI	TCCGGA	1 cut(s)	1960
BspFNI	CGCG	1 cut(s)	1308
BspMAI	CTGCAG	1 cut(s)	241
BspMI	ACCTGC	1 cut(s)	1858
BspTI	CTTAAG	1 cut(s)	1082
BsrDI	GCAATG	1 cut(s)	367
BsrI	ACTGG	5 cut(s)	14, 191, 848, 1462, 1933
BssECI	CCNNGG	3 cut(s)	482, 1209, 1714
BssNAI	GTATAC	1 cut(s)	379
Bst1107I	GTATAC	1 cut(s)	379
Bst2UI	CCWGG	2 cut(s)	1641, 1715
Bst4CI	ACNGT	9 cut(s)	255, 647, 812, 855, 1117, 1220, 1543, 1648, 1700
BstAFI	CTTAAG	1 cut(s)	1082
BstAPI	GCANNNNNTGC	1 cut(s)	1244
BstBAI	YACGTR	1 cut(s)	1812
BstC8I	GCNNGC	3 cut(s)	345, 358, 1166
BstDEI	CTNAG	5 cut(s)	69, 887, 1020, 1027, 1347
BstF5I	GGATG	6 cut(s)	825, 862, 1198, 1219, 1498, 1907
BstFNI	CGCG	1 cut(s)	1308
BstHHI	GCGC	1 cut(s)	1297
BstMAI	GTCTC	2 cut(s)	531, 1023
BstMCI	CGRYCG	2 cut(s)	1162, 1832
BstMWI	GCNNNNNNNGC	6 cut(s)	344, 353, 391, 1244, 1859, 1880
BstNI	CCWGG	2 cut(s)	1641, 1715
BstPAI	GACNNNNGTC	1 cut(s)	648
BstSCI	CCNGG	3 cut(s)	1208, 1639, 1713
BstSFI	CTRYAG	6 cut(s)	237, 1276, 1399, 1438, 1674, 1839
BstSLI	GKGCMC	2 cut(s)	1826, 1942
BstSNI	TACGTA	1 cut(s)	1812
BstUI	CGCG	1 cut(s)	1308
BstV1I	GCAGC	3 cut(s)	1217, 1247, 1309
BstX2I	RGATCY	2 cut(s)	41, 1324
BstXI	CCANNNNNNTGG	1 cut(s)	647
BstYI	RGATCY	2 cut(s)	41, 1324
BstZ17I	GTATAC	1 cut(s)	379
BsuI	GTATCC	1 cut(s)	769
BsuRI	GGCC	4 cut(s)	343, 1261, 1461, 1508
BtgZI	GCGATG	1 cut(s)	1323
BtsCI	GGATG	6 cut(s)	825, 862, 1198, 1219, 1498, 1907
BtsI	GCAGTG	3 cut(s)	626, 689, 1767
BtsIMutI	CAGTG	7 cut(s)	96, 626, 652, 689, 1028, 1113, 1767
BveI	ACCTGC	1 cut(s)	1858
Cac8I	GCNNGC	3 cut(s)	345, 358, 1166
CaiI	CAGNNNCTG	1 cut(s)	1646
CfoI	GCGC	1 cut(s)	1297
Cfr13I	GGNCC	2 cut(s)	189, 1506
CsiI	ACCWGGT	1 cut(s)	1639
Csp6I	GTAC	6 cut(s)	313, 851, 884, 1559, 1644, 1813
CviAII	CATG	7 cut(s)	10, 641, 691, 1364, 1484, 1703, 1742
CviQI	GTAC	6 cut(s)	313, 851, 884, 1559, 1644, 1813
DdeI	CTNAG	5 cut(s)	69, 887, 1020, 1027, 1347
DraI	TTTAAA	1 cut(s)	1122
EaeI	YGGCCR	2 cut(s)	341, 1259
Eco105I	TACGTA	1 cut(s)	1812
Eco24I	GRGCYC	2 cut(s)	1035, 1957
Eco47I	GGWCC	1 cut(s)	189
Eco57I	CTGAAG	2 cut(s)	45, 914
Eco88I	CYCGRG	2 cut(s)	483, 609
EcoO109I	RGGNCCY	1 cut(s)	1506
EcoRII	CCWGG	2 cut(s)	1639, 1713
EcoT38I	GRGCYC	2 cut(s)	1035, 1957
Esp3I	CGTCTC	1 cut(s)	531
FaeI	CATG	7 cut(s)	13, 644, 694, 1367, 1487, 1706, 1745
FalI	AAGNNNNNCTT	6 cut(s)	134, 166, 250, 282, 537, 569
FaqI	GGGAC	2 cut(s)	197, 500
FatI	CATG	7 cut(s)	9, 640, 690, 1363, 1483, 1702, 1741
FauI	CCCGC	1 cut(s)	150
FbaI	TGATCA	3 cut(s)	910, 955, 1594
FblI	GTMKAC	1 cut(s)	378
Fnu4HI	GCNGC	3 cut(s)	1206, 1236, 1298
FokI	GGATG	6 cut(s)	832, 849, 1185, 1226, 1505, 1894
FriOI	GRGCYC	2 cut(s)	1035, 1957
Fsp4HI	GCNGC	3 cut(s)	1206, 1236, 1298
GlaI	GCGC	1 cut(s)	1296
GluI	GCNGC	3 cut(s)	1206, 1236, 1298
GsaI	CCCAGC	1 cut(s)	414
GsuI	CTGGAG	1 cut(s)	736
HaeIII	GGCC	4 cut(s)	343, 1261, 1461, 1508
HapII	CCGG	2 cut(s)	1209, 1961
HhaI	GCGC	1 cut(s)	1297
Hin1II	CATG	7 cut(s)	13, 644, 694, 1367, 1487, 1706, 1745
Hin6I	GCGC	1 cut(s)	1295
HinP1I	GCGC	1 cut(s)	1295
HincII	GTYRAC	2 cut(s)	476, 1654
HindII	GTYRAC	2 cut(s)	476, 1654
HinfI	GANTC	7 cut(s)	5, 365, 548, 965, 1710, 1764, 1904
HpaII	CCGG	2 cut(s)	1209, 1961
HphI	GGTGA	4 cut(s)	76, 151, 1295, 1913
Hpy166II	GTNNAC	7 cut(s)	264, 379, 476, 1106, 1654, 1824, 1940
Hpy188I	TCNGA	6 cut(s)	910, 915, 1348, 1614, 1912, 1952
Hpy188III	TCNNGA	6 cut(s)	125, 485, 653, 753, 1425, 1961
Hpy8I	GTNNAC	7 cut(s)	264, 379, 476, 1106, 1654, 1824, 1940
Hpy99I	CGWCG	1 cut(s)	1426
HpyAV	CCTTC	7 cut(s)	1090, 1345, 1405, 1451, 1497, 1520, 1967
HpyCH4III	ACNGT	9 cut(s)	255, 647, 812, 855, 1117, 1220, 1543, 1648, 1700
HpyCH4IV	ACGT	3 cut(s)	478, 1547, 1811
HpyCH4V	TGCA	9 cut(s)	239, 295, 727, 807, 869, 1130, 1783, 1824, 1940
HpyF10VI	GCNNNNNNNGC	6 cut(s)	344, 353, 391, 1244, 1859, 1880
HpyF3I	CTNAG	5 cut(s)	69, 887, 1020, 1027, 1347
HpySE526I	ACGT	3 cut(s)	478, 1547, 1811
Hsp92II	CATG	7 cut(s)	13, 644, 694, 1367, 1487, 1706, 1745
HspAI	GCGC	1 cut(s)	1295
Kpn2I	TCCGGA	1 cut(s)	1960
Ksp22I	TGATCA	3 cut(s)	910, 955, 1594
LmnI	GCTCC	2 cut(s)	391, 1184
Lsp1109I	GCAGC	3 cut(s)	1217, 1247, 1309
LweI	GCATC	5 cut(s)	1117, 1134, 1309, 1483, 1579
MabI	ACCWGGT	1 cut(s)	1639
MaeII	ACGT	3 cut(s)	478, 1547, 1811
MaeIII	GTNAC	8 cut(s)	64, 448, 1153, 1192, 1267, 1479, 1543, 1901
MboII	GAAGA	7 cut(s)	38, 154, 212, 284, 991, 1153, 1334
MfeI	CAATTG	2 cut(s)	402, 1284
MflI	RGATCY	2 cut(s)	41, 1324
MhlI	GDGCHC	5 cut(s)	1035, 1826, 1885, 1942, 1957
MlsI	TGGCCA	2 cut(s)	343, 1261
MluNI	TGGCCA	2 cut(s)	343, 1261
MlyI	GAGTC	1 cut(s)	1898
Mox20I	TGGCCA	2 cut(s)	343, 1261
MroI	TCCGGA	1 cut(s)	1960
MscI	TGGCCA	2 cut(s)	343, 1261
MseI	TTAA	9 cut(s)	179, 207, 257, 603, 633, 1083, 1121, 1415, 1790
MslI	CAYNNNNRTG	4 cut(s)	62, 645, 1308, 1740
Msp20I	TGGCCA	2 cut(s)	343, 1261
MspCI	CTTAAG	1 cut(s)	1082
MspI	CCGG	2 cut(s)	1209, 1961
MspR9I	CCNGG	3 cut(s)	1210, 1641, 1715
MunI	CAATTG	2 cut(s)	402, 1284
MvaI	CCWGG	2 cut(s)	1641, 1715
MvnI	CGCG	1 cut(s)	1308
MwoI	GCNNNNNNNGC	6 cut(s)	344, 353, 391, 1244, 1859, 1880
NciI	CCSGG	1 cut(s)	1210
NlaIII	CATG	7 cut(s)	13, 644, 694, 1367, 1487, 1706, 1745
NmuCI	GTSAC	5 cut(s)	64, 448, 1153, 1267, 1901
PaeR7I	CTCGAG	1 cut(s)	609
PaqCI	CACCTGC	1 cut(s)	1858
PfeI	GAWTC	6 cut(s)	5, 365, 548, 965, 1710, 1764
Pfl23II	CGTACG	1 cut(s)	1812
PkrI	GCNGC	3 cut(s)	1207, 1237, 1299
Ple19I	CGATCG	2 cut(s)	1162, 1832
PleI	GAGTC	1 cut(s)	1898
PpsI	GAGTC	1 cut(s)	1898
Ppu21I	YACGTR	1 cut(s)	1812
PshAI	GACNNNNGTC	1 cut(s)	648
PsiI	TTATAA	2 cut(s)	557, 1137
Psp1406I	AACGTT	1 cut(s)	1547
Psp6I	CCWGG	2 cut(s)	1639, 1713
PspFI	CCCAGC	1 cut(s)	410
PspGI	CCWGG	2 cut(s)	1639, 1713
PspLI	CGTACG	1 cut(s)	1812
PspPI	GGNCC	2 cut(s)	189, 1506
PspXI	VCTCGAGB	1 cut(s)	609
PstI	CTGCAG	1 cut(s)	241
PstNI	CAGNNNCTG	1 cut(s)	1646
PsuI	RGATCY	2 cut(s)	41, 1324
PvuI	CGATCG	2 cut(s)	1162, 1832
RsaI	GTAC	6 cut(s)	314, 852, 885, 1560, 1645, 1814
RsaNI	GTAC	6 cut(s)	313, 851, 884, 1559, 1644, 1813
RseI	CAYNNNNRTG	4 cut(s)	62, 645, 1308, 1740
SaqAI	TTAA	9 cut(s)	179, 207, 257, 603, 633, 1083, 1121, 1415, 1790
SatI	GCNGC	3 cut(s)	1206, 1236, 1298
Sau96I	GGNCC	2 cut(s)	189, 1506
SchI	GAGTC	1 cut(s)	1898
ScrFI	CCNGG	3 cut(s)	1210, 1641, 1715
SduI	GDGCHC	5 cut(s)	1035, 1826, 1885, 1942, 1957
SexAI	ACCWGGT	1 cut(s)	1639
SfaNI	GCATC	5 cut(s)	1117, 1134, 1309, 1483, 1579
SfcI	CTRYAG	6 cut(s)	237, 1276, 1399, 1438, 1674, 1839
Sfr274I	CTCGAG	1 cut(s)	609
SinI	GGWCC	1 cut(s)	189
SlaI	CTCGAG	1 cut(s)	609
SmiMI	CAYNNNNRTG	4 cut(s)	62, 645, 1308, 1740
SmlI	CTYRAG	2 cut(s)	609, 1082
SmoI	CTYRAG	2 cut(s)	609, 1082
SnaBI	TACGTA	1 cut(s)	1812
SsiI	CCGC	2 cut(s)	157, 1306
SspI	AATATT	3 cut(s)	299, 1064, 1633
StyD4I	CCNGG	3 cut(s)	1208, 1639, 1713
TaaI	ACNGT	9 cut(s)	255, 647, 812, 855, 1117, 1220, 1543, 1648, 1700
TaiI	ACGT	3 cut(s)	481, 1550, 1814
TaqI	TCGA	4 cut(s)	610, 1320, 1424, 1879
TaqII	GACCGA	1 cut(s)	1172
TatI	WGTACW	2 cut(s)	312, 850
TfiI	GAWTC	6 cut(s)	5, 365, 548, 965, 1710, 1764
Tru1I	TTAA	9 cut(s)	179, 207, 257, 603, 633, 1083, 1121, 1415, 1790
Tru9I	TTAA	9 cut(s)	179, 207, 257, 603, 633, 1083, 1121, 1415, 1790
TscAI	CASTG	7 cut(s)	103, 633, 652, 689, 1028, 1120, 1774
TseFI	GTSAC	5 cut(s)	64, 448, 1153, 1267, 1901
TseI	GCWGC	3 cut(s)	1205, 1235, 1297
Tsp45I	GTSAC	5 cut(s)	64, 448, 1153, 1267, 1901
TspDTI	ATGAA	3 cut(s)	957, 1326, 1352
TspGWI	ACGGA	1 cut(s)	1268
TspRI	CASTG	7 cut(s)	103, 633, 652, 689, 1028, 1120, 1774
Vha464I	CTTAAG	1 cut(s)	1082
VneI	GTGCAC	2 cut(s)	1822, 1938
VpaK11BI	GGWCC	1 cut(s)	189
XapI	RAATTY	2 cut(s)	566, 1679
XhoI	CTCGAG	1 cut(s)	609
XmiI	GTMKAC	1 cut(s)	378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.