DUF1785
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ArgoN | PF16486 | 151 - 288 | 2.1e-37 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 299 - 347 | 3.5e-18 | Argonaute linker 1 domain |
| PAZ | PF02170 | 375 - 478 | 7.1e-27 | PAZ domain |
| ArgoL2 | PF16488 | 488 - 535 | 2.4e-13 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 545 - 623 | 8.9e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 642 - 956 | 7.4e-108 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 752 |
| AbsI | CCTCGAGG | 1 cut(s) | 930 |
| Acc16I | TGCGCA | 1 cut(s) | 2835 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2189 |
| AccBSI | CCGCTC | 2 cut(s) | 1614, 2802 |
| AccII | CGCG | 8 cut(s) | 12, 33, 48, 54, 60, 182, 347, 810 |
| AclWI | GGATC | 7 cut(s) | 727, 1037, 1119, 1524, 1764, 1947, 1960 |
| AcoI | YGGCCR | 5 cut(s) | 49, 55, 342, 2240, 2395 |
| AcsI | RAATTY | 5 cut(s) | 944, 1532, 1974, 2651, 2682 |
| AcuI | CTGAAG | 6 cut(s) | 555, 1145, 1151, 1502, 1901, 2880 |
| AcvI | CACGTG | 1 cut(s) | 1727 |
| AfaI | GTAC | 6 cut(s) | 217, 590, 1085, 1289, 1818, 2617 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 437, 922, 923, 1306, 1464, 1465, 1643, 2121, 2189 |
| AflII | CTTAAG | 3 cut(s) | 1598, 1886, 2066 |
| AgsI | TTSAA | 9 cut(s) | 584, 675, 751, 944, 1328, 1344, 1377, 2054, 2609 |
| AjnI | CCWGG | 5 cut(s) | 1097, 1384, 1637, 2611, 2934 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 371, 403, 1679, 1711, 1974, 2006 |
| Alw21I | GWGCWC | 4 cut(s) | 248, 1371, 2798, 2857 |
| Alw26I | GTCTC | 7 cut(s) | 603, 738, 830, 1876, 2005, 2067, 2254 |
| Alw44I | GTGCAC | 1 cut(s) | 2794 |
| AlwI | GGATC | 7 cut(s) | 727, 1037, 1119, 1524, 1764, 1947, 1960 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2618 |
| Ama87I | CYCGRG | 2 cut(s) | 930, 1458 |
| ApaLI | GTGCAC | 1 cut(s) | 2794 |
| ApeKI | GCWGC | 8 cut(s) | 796, 869, 1176, 1210, 2216, 2843, 2910, 2924 |
| ApoI | RAATTY | 5 cut(s) | 944, 1532, 1974, 2651, 2682 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 929, 961 |
| AseI | ATTAAT | 1 cut(s) | 2073 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2735 |
| AspS9I | GGNCC | 7 cut(s) | 257, 656, 926, 1455, 1961, 2339, 2938 |
| AsuC2I | CCSGG | 6 cut(s) | 75, 255, 432, 655, 1459, 1460 |
| AsuHPI | GGTGA | 5 cut(s) | 947, 1066, 1501, 2446, 2755 |
| AvaI | CYCGRG | 2 cut(s) | 930, 1458 |
| AvaII | GGWCC | 3 cut(s) | 926, 1961, 2938 |
| AxyI | CCTNAGG | 1 cut(s) | 983 |
| BaeGI | GKGCMC | 1 cut(s) | 2798 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1185, 1218, 2607, 2640 |
| BalI | TGGCCA | 2 cut(s) | 2242, 2397 |
| BamHI | GGATCC | 1 cut(s) | 1952 |
| BanII | GRGCYC | 2 cut(s) | 304, 1371 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 629, 661 |
| BbrPI | CACGTG | 1 cut(s) | 1727 |
| BbsI | GAAGAC | 2 cut(s) | 820, 2202 |
| Bbv12I | GWGCWC | 4 cut(s) | 248, 1371, 2798, 2857 |
| BbvI | GCAGC | 8 cut(s) | 808, 856, 1188, 1222, 2228, 2830, 2911, 2922 |
| BceAI | ACGGC | 2 cut(s) | 395, 1469 |
| BciT130I | CCWGG | 5 cut(s) | 1099, 1386, 1639, 2613, 2936 |
| BciVI | GTATCC | 2 cut(s) | 1624, 2620 |
| BclI | TGATCA | 2 cut(s) | 1659, 2358 |
| BcnI | CCSGG | 6 cut(s) | 75, 255, 432, 655, 1459, 1460 |
| BcoDI | GTCTC | 7 cut(s) | 603, 738, 830, 1876, 2005, 2067, 2254 |
| BfaI | CTAG | 2 cut(s) | 1575, 2840 |
| BfmI | CTRYAG | 3 cut(s) | 794, 2211, 2422 |
| BfrI | CTTAAG | 3 cut(s) | 1598, 1886, 2066 |
| BfuI | GTATCC | 2 cut(s) | 1624, 2620 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 350 |
| BglII | AGATCT | 2 cut(s) | 502, 2305 |
| Bme18I | GGWCC | 3 cut(s) | 926, 1961, 2938 |
| BmeT110I | CYCGRG | 2 cut(s) | 930, 1458 |
| BmgT120I | GGNCC | 7 cut(s) | 257, 656, 926, 1455, 1961, 2339, 2938 |
| BmrI | ACTGGG | 1 cut(s) | 1999 |
| BmsI | GCATC | 9 cut(s) | 517, 551, 734, 1482, 1561, 2101, 2467, 2563, 2845 |
| BmuI | ACTGGG | 1 cut(s) | 1999 |
| BpiI | GAAGAC | 2 cut(s) | 820, 2202 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 286, 318, 2116, 2148 |
| BpmI | CTGGAG | 2 cut(s) | 982, 1218 |
| Bpu10I | CCTNAGC | 2 cut(s) | 94, 2019 |
| BpuEI | CTTGAG | 1 cut(s) | 1259 |
| BpuMI | CCSGG | 6 cut(s) | 75, 255, 432, 655, 1459, 1460 |
| BsaAI | YACGTR | 1 cut(s) | 1727 |
| BsaBI | GATNNNNATC | 4 cut(s) | 507, 724, 1931, 2661 |
| BsaI | GGTCTC | 2 cut(s) | 830, 2254 |
| BsaWI | WCCGGW | 1 cut(s) | 23 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1140, 1170, 1191, 1221, 2157, 2187, 2498, 2528 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 437, 922, 923, 1306, 1464, 1465, 1643, 2121, 2189 |
| Bse118I | RCCGGY | 4 cut(s) | 208, 310, 316, 2341 |
| Bse1I | ACTGG | 9 cut(s) | 422, 965, 1201, 1222, 1569, 2005, 2243, 2398, 2525 |
| Bse21I | CCTNAGG | 1 cut(s) | 983 |
| Bse3DI | GCAATG | 3 cut(s) | 659, 1342, 2373 |
| Bse8I | GATNNNNATC | 4 cut(s) | 507, 724, 1931, 2661 |
| BseBI | CCWGG | 5 cut(s) | 1099, 1386, 1639, 2613, 2936 |
| BseJI | GATNNNNATC | 4 cut(s) | 507, 724, 1931, 2661 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 437, 922, 923, 1306, 1464, 1465, 1643, 2121, 2189 |
| BseMI | GCAATG | 3 cut(s) | 659, 1342, 2373 |
| BseNI | ACTGG | 9 cut(s) | 422, 965, 1201, 1222, 1569, 2005, 2243, 2398, 2525 |
| BseRI | GAGGAG | 2 cut(s) | 2137, 2522 |
| BseSI | GKGCMC | 1 cut(s) | 2798 |
| BseX3I | CGGCCG | 3 cut(s) | 49, 55, 342 |
| BseXI | GCAGC | 8 cut(s) | 808, 856, 1188, 1222, 2228, 2830, 2911, 2922 |
| BseYI | CCCAGC | 2 cut(s) | 2189, 2701 |
| BsgI | GTGCAG | 4 cut(s) | 855, 1229, 2564, 2910 |
| Bsh1236I | CGCG | 8 cut(s) | 12, 33, 48, 54, 60, 182, 347, 810 |
| Bsh1285I | CGRYCG | 4 cut(s) | 52, 58, 345, 1618 |
| BsiEI | CGRYCG | 4 cut(s) | 52, 58, 345, 1618 |
| BsiHKAI | GWGCWC | 4 cut(s) | 248, 1371, 2798, 2857 |
| BsiHKCI | CYCGRG | 2 cut(s) | 930, 1458 |
| BslFI | GGGAC | 2 cut(s) | 1911, 1947 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 437, 922, 923, 1306, 1464, 1465, 1643, 2121, 2189 |
| BsmAI | GTCTC | 7 cut(s) | 603, 738, 830, 1876, 2005, 2067, 2254 |
| BsmFI | GGGAC | 2 cut(s) | 1911, 1947 |
| BsmI | GAATGC | 3 cut(s) | 621, 1545, 2378 |
| Bso31I | GGTCTC | 2 cut(s) | 830, 2254 |
| BsoBI | CYCGRG | 2 cut(s) | 930, 1458 |
| Bsp1286I | GDGCHC | 5 cut(s) | 248, 304, 1371, 2798, 2857 |
| Bsp1407I | TGTACA | 1 cut(s) | 1816 |
| Bsp19I | CCATGG | 1 cut(s) | 1362 |
| BspFNI | CGCG | 8 cut(s) | 12, 33, 48, 54, 60, 182, 347, 810 |
| BspHI | TCATGA | 1 cut(s) | 1606 |
| BspMAI | CTGCAG | 1 cut(s) | 798 |
| BspPI | GGATC | 7 cut(s) | 727, 1037, 1119, 1524, 1764, 1947, 1960 |
| BspTI | CTTAAG | 3 cut(s) | 1598, 1886, 2066 |
| BspTNI | GGTCTC | 2 cut(s) | 830, 2254 |
| BsrBI | CCGCTC | 2 cut(s) | 1614, 2802 |
| BsrDI | GCAATG | 3 cut(s) | 659, 1342, 2373 |
| BsrFI | RCCGGY | 4 cut(s) | 208, 310, 316, 2341 |
| BsrGI | TGTACA | 1 cut(s) | 1816 |
| BsrI | ACTGG | 9 cut(s) | 422, 965, 1201, 1222, 1569, 2005, 2243, 2398, 2525 |
| BssAI | RCCGGY | 4 cut(s) | 208, 310, 316, 2341 |
| BssT1I | CCWWGG | 3 cut(s) | 405, 1362, 2161 |
| Bst2UI | CCWGG | 5 cut(s) | 1099, 1386, 1639, 2613, 2936 |
| Bst4CI | ACNGT | 7 cut(s) | 250, 890, 1778, 1821, 2101, 2201, 2620 |
| Bst6I | CTCTTC | 4 cut(s) | 58, 369, 632, 676 |
| BstAFI | CTTAAG | 3 cut(s) | 1598, 1886, 2066 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2225 |
| BstAUI | TGTACA | 1 cut(s) | 1816 |
| BstBAI | YACGTR | 1 cut(s) | 1727 |
| BstDSI | CCRYGG | 5 cut(s) | 46, 52, 58, 345, 1362 |
| BstEII | GGTNACC | 1 cut(s) | 935 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1304 |
| BstFNI | CGCG | 8 cut(s) | 12, 33, 48, 54, 60, 182, 347, 810 |
| BstMAI | GTCTC | 7 cut(s) | 603, 738, 830, 1876, 2005, 2067, 2254 |
| BstMCI | CGRYCG | 4 cut(s) | 52, 58, 345, 1618 |
| BstNI | CCWGG | 5 cut(s) | 1099, 1386, 1639, 2613, 2936 |
| BstPI | GGTNACC | 1 cut(s) | 935 |
| BstSFI | CTRYAG | 3 cut(s) | 794, 2211, 2422 |
| BstSLI | GKGCMC | 1 cut(s) | 2798 |
| BstUI | CGCG | 8 cut(s) | 12, 33, 48, 54, 60, 182, 347, 810 |
| BstV1I | GCAGC | 8 cut(s) | 808, 856, 1188, 1222, 2228, 2830, 2911, 2922 |
| BstV2I | GAAGAC | 2 cut(s) | 820, 2202 |
| BstX2I | RGATCY | 6 cut(s) | 502, 719, 1516, 1756, 1952, 2305 |
| BstYI | RGATCY | 6 cut(s) | 502, 719, 1516, 1756, 1952, 2305 |
| BstZI | CGGCCG | 3 cut(s) | 49, 55, 342 |
| Bsu36I | CCTNAGG | 1 cut(s) | 983 |
| BsuI | GTATCC | 2 cut(s) | 1624, 2620 |
| BtgI | CCRYGG | 5 cut(s) | 46, 52, 58, 345, 1362 |
| BtsI | GCAGTG | 4 cut(s) | 648, 2226, 2739, 2926 |
| BtsIMutI | CAGTG | 9 cut(s) | 429, 648, 1269, 1562, 2012, 2146, 2226, 2739, 2926 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2618 |
| CciI | TCATGA | 1 cut(s) | 1606 |
| CciNI | GCGGCCGC | 3 cut(s) | 49, 55, 342 |
| Cfr10I | RCCGGY | 4 cut(s) | 208, 310, 316, 2341 |
| Cfr13I | GGNCC | 7 cut(s) | 257, 656, 926, 1455, 1961, 2339, 2938 |
| Cfr42I | CCGCGG | 4 cut(s) | 49, 55, 61, 348 |
| Cfr9I | CCCGGG | 1 cut(s) | 1458 |
| CsiI | ACCWGGT | 1 cut(s) | 2611 |
| Csp6I | GTAC | 6 cut(s) | 216, 589, 1084, 1288, 1817, 2616 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2068, 2103 |
| CviAII | CATG | 9 cut(s) | 634, 1363, 1607, 1650, 1657, 1894, 2675, 2714, 2954 |
| CviQI | GTAC | 6 cut(s) | 216, 589, 1084, 1288, 1817, 2616 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 752 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 752 |
| EaeI | YGGCCR | 5 cut(s) | 49, 55, 342, 2240, 2395 |
| EagI | CGGCCG | 3 cut(s) | 49, 55, 342 |
| Eam1104I | CTCTTC | 4 cut(s) | 58, 369, 632, 676 |
| EarI | CTCTTC | 4 cut(s) | 58, 369, 632, 676 |
| EciI | GGCGGA | 1 cut(s) | 264 |
| Ecl136II | GAGCTC | 1 cut(s) | 1369 |
| EclXI | CGGCCG | 3 cut(s) | 49, 55, 342 |
| Eco130I | CCWWGG | 3 cut(s) | 405, 1362, 2161 |
| Eco147I | AGGCCT | 2 cut(s) | 1348, 2492 |
| Eco24I | GRGCYC | 2 cut(s) | 304, 1371 |
| Eco31I | GGTCTC | 2 cut(s) | 830, 2254 |
| Eco32I | GATATC | 1 cut(s) | 1021 |
| Eco47I | GGWCC | 3 cut(s) | 926, 1961, 2938 |
| Eco52I | CGGCCG | 3 cut(s) | 49, 55, 342 |
| Eco53kI | GAGCTC | 1 cut(s) | 1369 |
| Eco57I | CTGAAG | 6 cut(s) | 555, 1145, 1151, 1502, 1901, 2880 |
| Eco72I | CACGTG | 1 cut(s) | 1727 |
| Eco81I | CCTNAGG | 1 cut(s) | 983 |
| Eco88I | CYCGRG | 2 cut(s) | 930, 1458 |
| Eco91I | GGTNACC | 1 cut(s) | 935 |
| EcoICRI | GAGCTC | 1 cut(s) | 1369 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1304 |
| EcoO109I | RGGNCCY | 2 cut(s) | 926, 2938 |
| EcoO65I | GGTNACC | 1 cut(s) | 935 |
| EcoRI | GAATTC | 1 cut(s) | 2682 |
| EcoRII | CCWGG | 5 cut(s) | 1097, 1384, 1637, 2611, 2934 |
| EcoRV | GATATC | 1 cut(s) | 1021 |
| EcoT14I | CCWWGG | 3 cut(s) | 405, 1362, 2161 |
| EcoT38I | GRGCYC | 2 cut(s) | 304, 1371 |
| ErhI | CCWWGG | 3 cut(s) | 405, 1362, 2161 |
| FaeI | CATG | 9 cut(s) | 637, 1366, 1610, 1653, 1660, 1897, 2678, 2717, 2957 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1336, 1368 |
| FaqI | GGGAC | 2 cut(s) | 1911, 1947 |
| FatI | CATG | 9 cut(s) | 633, 1362, 1606, 1649, 1656, 1893, 2674, 2713, 2953 |
| FauI | CCCGC | 3 cut(s) | 187, 2671, 2807 |
| FauNDI | CATATG | 2 cut(s) | 625, 2785 |
| FbaI | TGATCA | 2 cut(s) | 1659, 2358 |
| FriOI | GRGCYC | 2 cut(s) | 304, 1371 |
| FspAI | RTGCGCAY | 1 cut(s) | 2835 |
| FspBI | CTAG | 2 cut(s) | 1575, 2840 |
| FspI | TGCGCA | 1 cut(s) | 2835 |
| GsaI | CCCAGC | 2 cut(s) | 2193, 2705 |
| GsuI | CTGGAG | 2 cut(s) | 982, 1218 |
| Hin1II | CATG | 9 cut(s) | 637, 1366, 1610, 1653, 1660, 1897, 2678, 2717, 2957 |
| HincII | GTYRAC | 1 cut(s) | 1451 |
| HindII | GTYRAC | 1 cut(s) | 1451 |
| HindIII | AAGCTT | 1 cut(s) | 2033 |
| HphI | GGTGA | 5 cut(s) | 947, 1066, 1501, 2446, 2755 |
| Hpy166II | GTNNAC | 4 cut(s) | 1233, 1451, 1525, 2796 |
| Hpy8I | GTNNAC | 4 cut(s) | 1233, 1451, 1525, 2796 |
| Hpy99I | CGWCG | 3 cut(s) | 244, 295, 400 |
| HpyAV | CCTTC | 7 cut(s) | 676, 701, 726, 1334, 2435, 2482, 2951 |
| HpyCH4III | ACNGT | 7 cut(s) | 250, 890, 1778, 1821, 2101, 2201, 2620 |
| HpyCH4IV | ACGT | 2 cut(s) | 1431, 1726 |
| HpySE526I | ACGT | 2 cut(s) | 1431, 1726 |
| Hsp92II | CATG | 9 cut(s) | 637, 1366, 1610, 1653, 1660, 1897, 2678, 2717, 2957 |
| KroI | GCCGGC | 3 cut(s) | 208, 310, 316 |
| KroNI | GCCGGC | 3 cut(s) | 210, 312, 318 |
| Ksp22I | TGATCA | 2 cut(s) | 1659, 2358 |
| KspI | CCGCGG | 4 cut(s) | 49, 55, 61, 348 |
| Lsp1109I | GCAGC | 8 cut(s) | 808, 856, 1188, 1222, 2228, 2830, 2911, 2922 |
| LweI | GCATC | 9 cut(s) | 517, 551, 734, 1482, 1561, 2101, 2467, 2563, 2845 |
| MabI | ACCWGGT | 1 cut(s) | 2611 |
| MaeI | CTAG | 2 cut(s) | 1575, 2840 |
| MaeII | ACGT | 2 cut(s) | 1431, 1726 |
| MaeIII | GTNAC | 7 cut(s) | 935, 1054, 1156, 1423, 2012, 2173, 2527 |
| MbiI | CCGCTC | 2 cut(s) | 1614, 2802 |
| MfeI | CAATTG | 1 cut(s) | 1377 |
| MflI | RGATCY | 6 cut(s) | 502, 719, 1516, 1756, 1952, 2305 |
| MhlI | GDGCHC | 5 cut(s) | 248, 304, 1371, 2798, 2857 |
| MlsI | TGGCCA | 2 cut(s) | 2242, 2397 |
| MluNI | TGGCCA | 2 cut(s) | 2242, 2397 |
| MlyI | GAGTC | 4 cut(s) | 465, 605, 1158, 1401 |
| MmeI | TCCRAC | 2 cut(s) | 1089, 2669 |
| Mox20I | TGGCCA | 2 cut(s) | 2242, 2397 |
| MreI | CGCCGGCG | 1 cut(s) | 310 |
| MroNI | GCCGGC | 3 cut(s) | 208, 310, 316 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2735 |
| MscI | TGGCCA | 2 cut(s) | 2242, 2397 |
| MslI | CAYNNNNRTG | 4 cut(s) | 513, 516, 2712, 2958 |
| Msp20I | TGGCCA | 2 cut(s) | 2242, 2397 |
| MspA1I | CMGCKG | 7 cut(s) | 48, 54, 60, 281, 347, 577, 2913 |
| MspCI | CTTAAG | 3 cut(s) | 1598, 1886, 2066 |
| MunI | CAATTG | 1 cut(s) | 1377 |
| Mva1269I | GAATGC | 3 cut(s) | 621, 1545, 2378 |
| MvaI | CCWGG | 5 cut(s) | 1099, 1386, 1639, 2613, 2936 |
| MvnI | CGCG | 8 cut(s) | 12, 33, 48, 54, 60, 182, 347, 810 |
| NaeI | GCCGGC | 3 cut(s) | 210, 312, 318 |
| NciI | CCSGG | 6 cut(s) | 75, 255, 432, 655, 1459, 1460 |
| NcoI | CCATGG | 1 cut(s) | 1362 |
| NdeI | CATATG | 2 cut(s) | 625, 2785 |
| NgoMIV | GCCGGC | 3 cut(s) | 208, 310, 316 |
| NlaIII | CATG | 9 cut(s) | 637, 1366, 1610, 1653, 1660, 1897, 2678, 2717, 2957 |
| NmuCI | GTSAC | 4 cut(s) | 935, 1054, 1423, 2173 |
| NotI | GCGGCCGC | 3 cut(s) | 49, 55, 342 |
| NsbI | TGCGCA | 1 cut(s) | 2835 |
| PaeR7I | CTCGAG | 1 cut(s) | 930 |
| PagI | TCATGA | 1 cut(s) | 1606 |
| PceI | AGGCCT | 2 cut(s) | 1348, 2492 |
| PctI | GAATGC | 3 cut(s) | 621, 1545, 2378 |
| PdiI | GCCGGC | 3 cut(s) | 210, 312, 318 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2735 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2189 |
| PfoI | TCCNGGA | 1 cut(s) | 1384 |
| PleI | GAGTC | 4 cut(s) | 464, 604, 1157, 1401 |
| PmaCI | CACGTG | 1 cut(s) | 1727 |
| PmlI | CACGTG | 1 cut(s) | 1727 |
| PpsI | GAGTC | 4 cut(s) | 464, 604, 1157, 1401 |
| Ppu21I | YACGTR | 1 cut(s) | 1727 |
| PpuMI | RGGWCCY | 2 cut(s) | 926, 2938 |
| PshBI | ATTAAT | 1 cut(s) | 2073 |
| Psp124BI | GAGCTC | 1 cut(s) | 1371 |
| Psp5II | RGGWCCY | 2 cut(s) | 926, 2938 |
| Psp6I | CCWGG | 5 cut(s) | 1097, 1384, 1637, 2611, 2934 |
| PspCI | CACGTG | 1 cut(s) | 1727 |
| PspEI | GGTNACC | 1 cut(s) | 935 |
| PspFI | CCCAGC | 2 cut(s) | 2189, 2701 |
| PspGI | CCWGG | 5 cut(s) | 1097, 1384, 1637, 2611, 2934 |
| PspPI | GGNCC | 7 cut(s) | 257, 656, 926, 1455, 1961, 2339, 2938 |
| PspPPI | RGGWCCY | 2 cut(s) | 926, 2938 |
| PspXI | VCTCGAGB | 1 cut(s) | 930 |
| PstI | CTGCAG | 1 cut(s) | 798 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2618 |
| PsuI | RGATCY | 6 cut(s) | 502, 719, 1516, 1756, 1952, 2305 |
| PvuII | CAGCTG | 2 cut(s) | 281, 577 |
| RsaI | GTAC | 6 cut(s) | 217, 590, 1085, 1289, 1818, 2617 |
| RsaNI | GTAC | 6 cut(s) | 216, 589, 1084, 1288, 1817, 2616 |
| RseI | CAYNNNNRTG | 4 cut(s) | 513, 516, 2712, 2958 |
| SacI | GAGCTC | 1 cut(s) | 1371 |
| SacII | CCGCGG | 4 cut(s) | 49, 55, 61, 348 |
| Sau96I | GGNCC | 7 cut(s) | 257, 656, 926, 1455, 1961, 2339, 2938 |
| SchI | GAGTC | 4 cut(s) | 465, 605, 1158, 1401 |
| SduI | GDGCHC | 5 cut(s) | 248, 304, 1371, 2798, 2857 |
| SexAI | ACCWGGT | 1 cut(s) | 2611 |
| SfaNI | GCATC | 9 cut(s) | 517, 551, 734, 1482, 1561, 2101, 2467, 2563, 2845 |
| SfcI | CTRYAG | 3 cut(s) | 794, 2211, 2422 |
| Sfr274I | CTCGAG | 1 cut(s) | 930 |
| Sfr303I | CCGCGG | 4 cut(s) | 49, 55, 61, 348 |
| SgrAI | CRCCGGYG | 1 cut(s) | 310 |
| SgrBI | CCGCGG | 4 cut(s) | 49, 55, 61, 348 |
| SinI | GGWCC | 3 cut(s) | 926, 1961, 2938 |
| SlaI | CTCGAG | 1 cut(s) | 930 |
| SmaI | CCCGGG | 1 cut(s) | 1460 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 513, 516, 2712, 2958 |
| SmlI | CTYRAG | 5 cut(s) | 930, 1238, 1598, 1886, 2066 |
| SmoI | CTYRAG | 5 cut(s) | 930, 1238, 1598, 1886, 2066 |
| SseBI | AGGCCT | 2 cut(s) | 1348, 2492 |
| SspI | AATATT | 1 cut(s) | 2605 |
| SspMI | CTAG | 2 cut(s) | 1575, 2840 |
| SstI | GAGCTC | 1 cut(s) | 1371 |
| StuI | AGGCCT | 2 cut(s) | 1348, 2492 |
| StyI | CCWWGG | 3 cut(s) | 405, 1362, 2161 |
| TaaI | ACNGT | 7 cut(s) | 250, 890, 1778, 1821, 2101, 2201, 2620 |
| TaiI | ACGT | 2 cut(s) | 1434, 1729 |
| TaqI | TCGA | 8 cut(s) | 242, 293, 486, 712, 931, 1189, 1720, 2390 |
| TatI | WGTACW | 3 cut(s) | 588, 1287, 1816 |
| TscAI | CASTG | 9 cut(s) | 429, 655, 1269, 1569, 2012, 2146, 2226, 2746, 2926 |
| TseFI | GTSAC | 4 cut(s) | 935, 1054, 1423, 2173 |
| TseI | GCWGC | 8 cut(s) | 796, 869, 1176, 1210, 2216, 2843, 2910, 2924 |
| Tsp45I | GTSAC | 4 cut(s) | 935, 1054, 1423, 2173 |
| TspDTI | ATGAA | 7 cut(s) | 9, 324, 650, 1428, 2336, 2362, 2868 |
| TspGWI | ACGGA | 2 cut(s) | 384, 2500 |
| TspMI | CCCGGG | 1 cut(s) | 1458 |
| TspRI | CASTG | 9 cut(s) | 429, 655, 1269, 1569, 2012, 2146, 2226, 2746, 2926 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2189 |
| Vha464I | CTTAAG | 3 cut(s) | 1598, 1886, 2066 |
| VneI | GTGCAC | 1 cut(s) | 2794 |
| VpaK11BI | GGWCC | 3 cut(s) | 926, 1961, 2938 |
| VspI | ATTAAT | 1 cut(s) | 2073 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1304 |
| XapI | RAATTY | 5 cut(s) | 944, 1532, 1974, 2651, 2682 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 478, 1261 |
| XhoI | CTCGAG | 1 cut(s) | 930 |
| XmaI | CCCGGG | 1 cut(s) | 1458 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2735 |
| XspI | CTAG | 2 cut(s) | 1575, 2840 |