Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0001300

Physical Location & Seq

Genomic Coordinates Reverse (-)

53441682 .. 53454349

Gene Structure 12668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG401800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGTCAGGGCGCGGTGGCCGAGGCCGGCATTATTCCGGCGCTCGCTCTAATCCATCGCGGGGCGGAGGCGCCGGGACTCAGACTCCTGCTTATTCTCCACCAGCGGCCTCGTCAAGTTCGGCTCCTCCGGTGGCTTCGCTGAGTAGCGAGATGGAGCAGAAGTTGACACTGGAGACGACGACGGACGTGGCTGTCGTGCCGCCGGCGTCGTCGAAGGCGGTGAGCTTTCCGCAGAGGCCGAATTTCGGGACGGTCGGCAAGAAAATTCAAGTCAGAGCCAATCACTTCCTGGTACAGGTTGCAGACAGAGACGTTCACCATTACAATGTTACCATAACCCCAGAAGTTGCATCCAAAAAGATCCACAGGGAGGTGATAAACCAACTGGTCTGTTTGTATTCCGAGACGCATTTAGGCAAGAGAATTCCTGCTTATGATGGCATGAAGAGCCTCTATACAGCAGGGCCATTGCCATTTTCCTCCCAGGAGTTTGTTGTCAAATTACTTCCAAATGATGGTCGTGCTGCAGCTGCAGGGTCTTCAACTTCTTCGAAAAGAAAGGATCGAGAGTTTAAGGTGGCTCTCACTTTGGCTAATAAGCCAGACCTTTATCAACTACAACAGTTCTTGTGCAGCCAGCGTGTTGAAACACCTCAAGAGGCAATACAAGTTCTTGATATTGTTCTTAGAGCTACACCATCGGAAAAGTACACTGTTGTTGGGAGGTCATTTTTCTCTACTGAGCTTGGGCCAAAAGGCAGTCTAGGTGAAGGTTTGGAGTACTGGAGAGGTTTTTACCAGAGTCTACGCCCAACCCAGCTAGGACTTTCCCTTAATATTGATGTGTCAGCGAGATCTTTTTTTGAACCCATTTTGGTGACTGAGTTTCTTGCTAAACATTTTTACCACACTGATCGTTCCAAGCATTTGCCTGATCGTGATTGTATAAAGGTGAAGAAAACCTTGAAGCGGGTCAAGGTAGAAGTTCGTTTAAGGGACTGGACCAAAAACGAAGAAGTTAAGAGAACTTACACAATCAATGGACTATCTGCAGAACCATTGGAACAGTTAAGGTTTACTTGTGAAGATGAGAACACATCAGTTGTGCAATATTATCGTAAGAAGTACAAGATTGATCTCAAATATGTAGCTTGGCCAGCCATTCAAGCTGGCAATGATTCAAAACCCGTATACTTGCCTATGGAGCTTTGCTCAATTGTTGCTGGGCAGAGATACACAAAGAAACTGAATAAAAAACAAGTCACTAACTTACTAAAAGCAACTTGTCAACGTCCTCGGGACAGGGAAAATAATATAACACAGGTTGGTGGACGAAACACTGTTTTAAATGATGCAATTTATAAGAAGATGCCTGTTGTGACCGATCGCTTGCCCACAATTATATTTGGAGCAGATGTTACTCATCCAGCAGCCGGGGATGACAGTAGCCCATCAATAGCAGCAGGGCATCATCAAAAGATCCACGATGCAAGTTCCAAAGGCCAAATTTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009814 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016441 GO:0016458 GO:0019222 GO:0035821 GO:0040029 GO:0043207 GO:0044003 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0048519 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051817 GO:0052018 GO:0052249 GO:0060145 GO:0060255 GO:0065007 GO:0098542 GO:0098586

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

504

Amino Acids

55.98

Weight (kDa)

9.62

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	87 - 229	2.3e-36	N-terminal domain of argonaute
ArgoL1	PF08699	240 - 288	1.2e-18	Argonaute linker 1 domain
PAZ	PF02170	313 - 424	8.4e-26	PAZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27880
fragaria_vesca	FvH4_3g30201 FvH4_3g30202
malus_domestica	MD03G1130600.v1.1 MD03G1254500.v1.1 MD11G1152200.v1.1 MD11G1152400.v1.1
prunus_persica	Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1 Prupe.6G115400_v2.0.a1
pyrus_communis	pycom01g05040 pycom11g12470
rosa_chinensis	RchiOBHm_Chr1g0362621 RchiOBHm_Chr5g0055991 RchiOBHm_Chr5g0056001 RchiOBHm_Chr5g0056021 RchiOBHm_Chr5g0056031 RchiOBHm_Chr5g0056051 RchiOBHm_Chr5g0056071 RchiOBHm_Chr5g0056081 RchiOBHm_Chr5g0056091
rosa_laevigata	RLG00000027633 RLG00000035041 RLG00000035044 RLG00000035045 RLG00000035046
rosa_roxburghii	Rroxscaffold_1G00024210 Rroxscaffold_1G00024220
rosa_rugosa	Rorug05G0297000 Rorug05G0297100 Rorug05G0297200 Rorug05G0297300 Rorug05G0297300 Rorug05G0297400
rosa_samantha	Rh1CG289700 Rh1DG302900 Rh5AG368000 Rh5AG368200 Rh5AG368300 Rh5CG401800 Rh5CG402100 Rh5CG402200 Rh5DG391500 Rh5DG391600 Rh5DG391700
rosa_wichuraiana	Rw0G004500 Rw1G027430 Rw5G034540 Rw5G034570 Rw5G034580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1362
AasI	GACNNNNNNGTC	1 cut(s)	191
AccB1I	GGYRCC	1 cut(s)	68
AccB7I	CCANNNNNTGG	1 cut(s)	515
AccI	GTMKAC	2 cut(s)	805, 1191
AccII	CGCG	2 cut(s)	12, 58
AciI	CCGC	8 cut(s)	12, 58, 63, 104, 200, 218, 230, 970
AclWI	GGATC	3 cut(s)	355, 570, 1474
AcoI	YGGCCR	2 cut(s)	16, 1154
AcsI	RAATTY	4 cut(s)	241, 264, 423, 1506
AcyI	GRCGYC	2 cut(s)	69, 206
AfaI	GTAC	4 cut(s)	294, 710, 782, 1127
AfiI	CCNNNNNNNGG	7 cut(s)	59, 245, 295, 370, 515, 969, 1433
AgsI	TTSAA	7 cut(s)	269, 543, 647, 866, 967, 1166, 1182
AjiI	CACGTC	1 cut(s)	187
AjnI	CCWGG	2 cut(s)	288, 483
AluBI	AGCT	8 cut(s)	225, 530, 692, 745, 820, 1151, 1169, 1207
AluI	AGCT	8 cut(s)	225, 530, 692, 745, 820, 1151, 1169, 1207
Alw26I	GTCTC	3 cut(s)	167, 303, 398
AlwI	GGATC	3 cut(s)	355, 570, 1474
Ama87I	CYCGRG	1 cut(s)	1296
AoxI	GGCC	8 cut(s)	16, 22, 105, 236, 464, 749, 1154, 1501
ApeKI	GCWGC	6 cut(s)	524, 527, 530, 633, 1430, 1460
ApoI	RAATTY	4 cut(s)	241, 264, 423, 1506
AspLEI	GCGC	3 cut(s)	12, 41, 71
AspS9I	GGNCC	3 cut(s)	464, 749, 1002
AsuC2I	CCSGG	2 cut(s)	73, 1435
AsuHPI	GGTGA	6 cut(s)	232, 308, 385, 779, 889, 964
AsuII	TTCGAA	1 cut(s)	551
AvaI	CYCGRG	1 cut(s)	1296
AvaII	GGWCC	1 cut(s)	1002
BalI	TGGCCA	1 cut(s)	1156
BanI	GGYRCC	1 cut(s)	68
BbsI	GAAGAC	1 cut(s)	531
BbvI	GCAGC	6 cut(s)	511, 517, 539, 645, 1442, 1472
BccI	CCATC	6 cut(s)	61, 145, 431, 509, 706, 1459
BcgI	CGANNNNNNTGC	2 cut(s)	1097, 1131
BciT130I	CCWGG	2 cut(s)	290, 485
BcnI	CCSGG	2 cut(s)	73, 1435
BcoDI	GTCTC	3 cut(s)	167, 303, 398
BfaI	CTAG	2 cut(s)	764, 821
BfmI	CTRYAG	3 cut(s)	525, 531, 1050
BfoI	RGCGCY	2 cut(s)	42, 72
BglII	AGATCT	1 cut(s)	854
BisI	GCNGC	8 cut(s)	105, 200, 525, 528, 531, 634, 1431, 1461
BlsI	GCNGC	8 cut(s)	106, 201, 526, 529, 532, 635, 1432, 1462
BmcAI	AGTACT	1 cut(s)	782
Bme1390I	CCNGG	4 cut(s)	73, 290, 485, 1435
Bme18I	GGWCC	1 cut(s)	1002
BmeT110I	CYCGRG	1 cut(s)	1296
BmgBI	CACGTC	1 cut(s)	187
BmgT120I	GGNCC	3 cut(s)	464, 749, 1002
BmiI	GGNNCC	2 cut(s)	70, 123
BmrFI	CCNGG	4 cut(s)	73, 290, 485, 1435
BmsI	GCATC	5 cut(s)	359, 1342, 1359, 1477, 1477
BpiI	GAAGAC	1 cut(s)	531
BplI	GAGNNNNNCTC	2 cut(s)	1196, 1228
BpmI	CTGGAG	2 cut(s)	191, 805
Bpu14I	TTCGAA	1 cut(s)	551
BpuEI	CTTGAG	1 cut(s)	639
BpuMI	CCSGG	2 cut(s)	73, 1435
BsaHI	GRCGYC	2 cut(s)	69, 206
BsaJI	CCNNGG	4 cut(s)	19, 483, 1295, 1434
BsaWI	WCCGGW	1 cut(s)	127
BsaXI	ACNNNNNCTCC	6 cut(s)	67, 97, 146, 176, 1401, 1431
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 245, 295, 370, 515, 969, 1433
Bse118I	RCCGGY	2 cut(s)	24, 202
Bse1I	ACTGG	4 cut(s)	174, 390, 788, 1004
Bse3DI	GCAATG	2 cut(s)	467, 1180
BseBI	CCWGG	2 cut(s)	290, 485
BseDI	CCNNGG	4 cut(s)	19, 483, 1295, 1434
BseGI	GGATG	3 cut(s)	350, 1423, 1444
BseLI	CCNNNNNNNGG	7 cut(s)	59, 245, 295, 370, 515, 969, 1433
BseMI	GCAATG	2 cut(s)	467, 1180
BseMII	CTCAG	4 cut(s)	92, 131, 732, 873
BseNI	ACTGG	4 cut(s)	174, 390, 788, 1004
BseRI	GAGGAG	1 cut(s)	114
BseXI	GCAGC	6 cut(s)	511, 517, 539, 645, 1442, 1472
BseYI	CCCAGC	2 cut(s)	816, 1223
BsgI	GTGCAG	1 cut(s)	652
Bsh1236I	CGCG	2 cut(s)	12, 58
Bsh1285I	CGRYCG	2 cut(s)	255, 1387
BshFI	GGCC	8 cut(s)	18, 24, 107, 238, 466, 751, 1156, 1503
BshNI	GGYRCC	1 cut(s)	68
BsiEI	CGRYCG	2 cut(s)	255, 1387
BsiHKCI	CYCGRG	1 cut(s)	1296
BsiSI	CCGG	6 cut(s)	25, 36, 72, 128, 203, 1434
BslFI	GGGAC	4 cut(s)	88, 262, 1010, 1313
BslI	CCNNNNNNNGG	7 cut(s)	59, 245, 295, 370, 515, 969, 1433
BsmAI	GTCTC	3 cut(s)	167, 303, 398
BsmBI	CGTCTC	3 cut(s)	167, 303, 398
BsmFI	GGGAC	4 cut(s)	88, 262, 1010, 1313
BsnI	GGCC	8 cut(s)	18, 24, 107, 238, 466, 751, 1156, 1503
BsoBI	CYCGRG	1 cut(s)	1296
Bsp119I	TTCGAA	1 cut(s)	551
Bsp143I	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
BspACI	CCGC	8 cut(s)	12, 58, 63, 104, 200, 218, 230, 970
BspANI	GGCC	8 cut(s)	18, 24, 107, 238, 466, 751, 1156, 1503
BspCNI	CTCAG	4 cut(s)	91, 132, 733, 874
BspFNI	CGCG	2 cut(s)	12, 58
BspLI	GGNNCC	2 cut(s)	70, 123
BspMAI	CTGCAG	3 cut(s)	529, 535, 1054
BspPI	GGATC	3 cut(s)	355, 570, 1474
BspQI	GCTCTTC	1 cut(s)	440
BspT104I	TTCGAA	1 cut(s)	551
BspT107I	GGYRCC	1 cut(s)	68
BsrDI	GCAATG	2 cut(s)	467, 1180
BsrFI	RCCGGY	2 cut(s)	24, 202
BsrI	ACTGG	4 cut(s)	174, 390, 788, 1004
BssAI	RCCGGY	2 cut(s)	24, 202
BssECI	CCNNGG	4 cut(s)	19, 483, 1295, 1434
BssMI	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
BssNAI	GTATAC	1 cut(s)	1192
BssNI	GRCGYC	2 cut(s)	69, 206
Bst1107I	GTATAC	1 cut(s)	1192
Bst2UI	CCWGG	2 cut(s)	290, 485
Bst4CI	ACNGT	6 cut(s)	253, 624, 715, 1068, 1342, 1445
Bst6I	CTCTTC	1 cut(s)	440
BstACI	GRCGYC	2 cut(s)	69, 206
BstBI	TTCGAA	1 cut(s)	551
BstC8I	GCNNGC	7 cut(s)	26, 43, 204, 638, 1158, 1171, 1391
BstDEI	CTNAG	5 cut(s)	78, 140, 686, 741, 882
BstENI	CCTNNNNNAGG	1 cut(s)	293
BstF5I	GGATG	3 cut(s)	350, 1423, 1444
BstFNI	CGCG	2 cut(s)	12, 58
BstH2I	RGCGCY	2 cut(s)	42, 72
BstHHI	GCGC	3 cut(s)	12, 41, 71
BstKTI	GATC	8 cut(s)	363, 565, 857, 916, 937, 1138, 1387, 1482
BstMAI	GTCTC	3 cut(s)	167, 303, 398
BstMBI	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
BstMCI	CGRYCG	2 cut(s)	255, 1387
BstMWI	GCNNNNNNNGC	5 cut(s)	447, 530, 1157, 1166, 1204
BstNI	CCWGG	2 cut(s)	290, 485
BstSCI	CCNGG	4 cut(s)	71, 288, 483, 1433
BstSFI	CTRYAG	3 cut(s)	525, 531, 1050
BstUI	CGCG	2 cut(s)	12, 58
BstV1I	GCAGC	6 cut(s)	511, 517, 539, 645, 1442, 1472
BstV2I	GAAGAC	1 cut(s)	531
BstX2I	RGATCY	3 cut(s)	360, 854, 1479
BstYI	RGATCY	3 cut(s)	360, 854, 1479
BstZ17I	GTATAC	1 cut(s)	1192
BsuRI	GGCC	8 cut(s)	18, 24, 107, 238, 466, 751, 1156, 1503
BtgZI	GCGATG	1 cut(s)	39
BtrI	CACGTC	1 cut(s)	187
BtsCI	GGATG	3 cut(s)	350, 1423, 1444
BtsIMutI	CAGTG	4 cut(s)	167, 711, 909, 1338
Cac8I	GCNNGC	7 cut(s)	26, 43, 204, 638, 1158, 1171, 1391
CfoI	GCGC	3 cut(s)	12, 41, 71
Cfr10I	RCCGGY	2 cut(s)	24, 202
Cfr13I	GGNCC	3 cut(s)	464, 749, 1002
CseI	GACGC	2 cut(s)	195, 415
Csp6I	GTAC	4 cut(s)	293, 709, 781, 1126
CviAII	CATG	1 cut(s)	442
CviQI	GTAC	4 cut(s)	293, 709, 781, 1126
DdeI	CTNAG	5 cut(s)	78, 140, 686, 741, 882
DinI	GGCGCC	1 cut(s)	70
DpnI	GATC	8 cut(s)	362, 564, 856, 915, 936, 1137, 1386, 1481
DpnII	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
DraI	TTTAAA	1 cut(s)	1347
DrdI	GACNNNNNNGTC	1 cut(s)	191
DseDI	GACNNNNNNGTC	1 cut(s)	191
EaeI	YGGCCR	2 cut(s)	16, 1154
Eam1104I	CTCTTC	1 cut(s)	440
EarI	CTCTTC	1 cut(s)	440
EciI	GGCGGA	1 cut(s)	78
Eco47I	GGWCC	1 cut(s)	1002
Eco88I	CYCGRG	1 cut(s)	1296
EcoNI	CCTNNNNNAGG	1 cut(s)	293
EcoRI	GAATTC	1 cut(s)	423
EcoRII	CCWGG	2 cut(s)	288, 483
EgeI	GGCGCC	1 cut(s)	70
EheI	GGCGCC	1 cut(s)	70
Esp3I	CGTCTC	3 cut(s)	167, 303, 398
FaeI	CATG	1 cut(s)	445
FalI	AAGNNNNNCTT	4 cut(s)	947, 979, 1063, 1095
FaqI	GGGAC	4 cut(s)	88, 262, 1010, 1313
FatI	CATG	1 cut(s)	441
FauI	CCCGC	2 cut(s)	51, 963
FblI	GTMKAC	2 cut(s)	805, 1191
Fnu4HI	GCNGC	8 cut(s)	105, 200, 525, 528, 531, 634, 1431, 1461
FokI	GGATG	3 cut(s)	337, 1410, 1451
Fsp4HI	GCNGC	8 cut(s)	105, 200, 525, 528, 531, 634, 1431, 1461
FspBI	CTAG	2 cut(s)	764, 821
GlaI	GCGC	3 cut(s)	11, 40, 70
GluI	GCNGC	8 cut(s)	105, 200, 525, 528, 531, 634, 1431, 1461
GsaI	CCCAGC	2 cut(s)	820, 1227
GsuI	CTGGAG	2 cut(s)	191, 805
HaeII	RGCGCY	2 cut(s)	42, 72
HaeIII	GGCC	8 cut(s)	18, 24, 107, 238, 466, 751, 1156, 1503
HapII	CCGG	6 cut(s)	25, 36, 72, 128, 203, 1434
HgaI	GACGC	2 cut(s)	195, 415
HhaI	GCGC	3 cut(s)	12, 41, 71
Hin1I	GRCGYC	2 cut(s)	69, 206
Hin1II	CATG	1 cut(s)	445
Hin6I	GCGC	3 cut(s)	10, 39, 69
HinP1I	GCGC	3 cut(s)	10, 39, 69
HincII	GTYRAC	2 cut(s)	165, 1289
HindII	GTYRAC	2 cut(s)	165, 1289
HinfI	GANTC	4 cut(s)	76, 82, 802, 1178
HpaII	CCGG	6 cut(s)	25, 36, 72, 128, 203, 1434
HphI	GGTGA	6 cut(s)	232, 308, 385, 779, 889, 964
Hpy166II	GTNNAC	8 cut(s)	165, 316, 711, 806, 1077, 1192, 1289, 1331
Hpy188I	TCNGA	4 cut(s)	81, 275, 403, 703
Hpy188III	TCNNGA	6 cut(s)	247, 566, 656, 674, 938, 1298
Hpy8I	GTNNAC	8 cut(s)	165, 316, 711, 806, 1077, 1192, 1289, 1331
Hpy99I	CGWCG	4 cut(s)	181, 184, 211, 214
HpyAV	CCTTC	2 cut(s)	208, 764
HpyCH4III	ACNGT	6 cut(s)	253, 624, 715, 1068, 1342, 1445
HpyCH4IV	ACGT	3 cut(s)	186, 312, 1291
HpyCH4V	TGCA	9 cut(s)	302, 350, 527, 533, 633, 1052, 1108, 1355, 1490
HpyF10VI	GCNNNNNNNGC	5 cut(s)	447, 530, 1157, 1166, 1204
HpyF3I	CTNAG	5 cut(s)	78, 140, 686, 741, 882
HpySE526I	ACGT	3 cut(s)	186, 312, 1291
Hsp92I	GRCGYC	2 cut(s)	69, 206
Hsp92II	CATG	1 cut(s)	445
HspAI	GCGC	3 cut(s)	10, 39, 69
KasI	GGCGCC	1 cut(s)	68
KroI	GCCGGC	2 cut(s)	24, 202
KroNI	GCCGGC	2 cut(s)	26, 204
Kzo9I	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
LguI	GCTCTTC	1 cut(s)	440
LmnI	GCTCC	4 cut(s)	127, 154, 1204, 1409
Lsp1109I	GCAGC	6 cut(s)	511, 517, 539, 645, 1442, 1472
LweI	GCATC	5 cut(s)	359, 1342, 1359, 1477, 1477
MaeI	CTAG	2 cut(s)	764, 821
MaeII	ACGT	3 cut(s)	186, 312, 1291
MaeIII	GTNAC	5 cut(s)	328, 877, 1261, 1378, 1417
MalI	GATC	8 cut(s)	362, 564, 856, 915, 936, 1137, 1386, 1481
MboI	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
MboII	GAAGA	7 cut(s)	457, 531, 540, 967, 1025, 1097, 1378
MfeI	CAATTG	1 cut(s)	1215
MflI	RGATCY	3 cut(s)	360, 854, 1479
MlsI	TGGCCA	1 cut(s)	1156
MluCI	AATT	8 cut(s)	241, 264, 423, 500, 1215, 1356, 1398, 1506
MluNI	TGGCCA	1 cut(s)	1156
Mly113I	GGCGCC	1 cut(s)	69
MlyI	GAGTC	3 cut(s)	70, 76, 811
Mox20I	TGGCCA	1 cut(s)	1156
MreI	CGCCGGCG	1 cut(s)	202
MroNI	GCCGGC	2 cut(s)	24, 202
MscI	TGGCCA	1 cut(s)	1156
MseI	TTAA	7 cut(s)	573, 834, 992, 1020, 1070, 1346, 1513
MslI	CAYNNNNRTG	2 cut(s)	324, 875
Msp20I	TGGCCA	1 cut(s)	1156
MspA1I	CMGCKG	2 cut(s)	104, 530
MspI	CCGG	6 cut(s)	25, 36, 72, 128, 203, 1434
MspR9I	CCNGG	4 cut(s)	73, 290, 485, 1435
MunI	CAATTG	1 cut(s)	1215
MvaI	CCWGG	2 cut(s)	290, 485
MvnI	CGCG	2 cut(s)	12, 58
MwoI	GCNNNNNNNGC	5 cut(s)	447, 530, 1157, 1166, 1204
NaeI	GCCGGC	2 cut(s)	26, 204
NarI	GGCGCC	1 cut(s)	69
NciI	CCSGG	2 cut(s)	73, 1435
NdeII	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
NgoMIV	GCCGGC	2 cut(s)	24, 202
NlaIII	CATG	1 cut(s)	445
NlaIV	GGNNCC	2 cut(s)	70, 123
NmeAIII	GCCGAG	1 cut(s)	44
NmuCI	GTSAC	3 cut(s)	877, 1261, 1378
NspV	TTCGAA	1 cut(s)	551
PciSI	GCTCTTC	1 cut(s)	440
PcsI	WCGNNNNNNNCGW	1 cut(s)	192
PdiI	GCCGGC	2 cut(s)	26, 204
PfeI	GAWTC	1 cut(s)	1178
PflMI	CCANNNNNTGG	1 cut(s)	515
PkrI	GCNGC	8 cut(s)	106, 201, 526, 529, 532, 635, 1432, 1462
Ple19I	CGATCG	1 cut(s)	1387
PleI	GAGTC	3 cut(s)	70, 76, 810
PluTI	GGCGCC	1 cut(s)	72
PpsI	GAGTC	3 cut(s)	70, 76, 810
PsiI	TTATAA	1 cut(s)	1362
Psp6I	CCWGG	2 cut(s)	288, 483
PspFI	CCCAGC	2 cut(s)	816, 1223
PspGI	CCWGG	2 cut(s)	288, 483
PspN4I	GGNNCC	2 cut(s)	70, 123
PspPI	GGNCC	3 cut(s)	464, 749, 1002
PstI	CTGCAG	3 cut(s)	529, 535, 1054
PsuI	RGATCY	3 cut(s)	360, 854, 1479
PvuI	CGATCG	1 cut(s)	1387
PvuII	CAGCTG	1 cut(s)	530
RsaI	GTAC	4 cut(s)	294, 710, 782, 1127
RsaNI	GTAC	4 cut(s)	293, 709, 781, 1126
RseI	CAYNNNNRTG	2 cut(s)	324, 875
SapI	GCTCTTC	1 cut(s)	440
SaqAI	TTAA	7 cut(s)	573, 834, 992, 1020, 1070, 1346, 1513
SatI	GCNGC	8 cut(s)	105, 200, 525, 528, 531, 634, 1431, 1461
Sau3AI	GATC	8 cut(s)	360, 562, 854, 913, 934, 1135, 1384, 1479
Sau96I	GGNCC	3 cut(s)	464, 749, 1002
ScaI	AGTACT	1 cut(s)	782
SchI	GAGTC	3 cut(s)	70, 76, 811
ScrFI	CCNGG	4 cut(s)	73, 290, 485, 1435
SfaNI	GCATC	5 cut(s)	359, 1342, 1359, 1477, 1477
SfcI	CTRYAG	3 cut(s)	525, 531, 1050
SfoI	GGCGCC	1 cut(s)	70
SfuI	TTCGAA	1 cut(s)	551
SgrAI	CRCCGGYG	1 cut(s)	202
SinI	GGWCC	1 cut(s)	1002
SmiMI	CAYNNNNRTG	2 cut(s)	324, 875
SmlI	CTYRAG	1 cut(s)	654
SmoI	CTYRAG	1 cut(s)	654
Sse9I	AATT	8 cut(s)	241, 264, 423, 500, 1215, 1356, 1398, 1506
SsiI	CCGC	8 cut(s)	12, 58, 63, 104, 200, 218, 230, 970
SspDI	GGCGCC	1 cut(s)	68
SspI	AATATT	2 cut(s)	838, 1112
SspMI	CTAG	2 cut(s)	764, 821
StyD4I	CCNGG	4 cut(s)	71, 288, 483, 1433
TaaI	ACNGT	6 cut(s)	253, 624, 715, 1068, 1342, 1445
TaiI	ACGT	3 cut(s)	189, 315, 1294
TaqI	TCGA	3 cut(s)	212, 551, 565
TaqII	GACCGA	1 cut(s)	1397
TasI	AATT	8 cut(s)	241, 264, 423, 500, 1215, 1356, 1398, 1506
TatI	WGTACW	3 cut(s)	708, 780, 1125
TauI	GCSGC	2 cut(s)	107, 202
TfiI	GAWTC	1 cut(s)	1178
Tru1I	TTAA	7 cut(s)	573, 834, 992, 1020, 1070, 1346, 1513
Tru9I	TTAA	7 cut(s)	573, 834, 992, 1020, 1070, 1346, 1513
TscAI	CASTG	4 cut(s)	174, 718, 916, 1345
TseFI	GTSAC	3 cut(s)	877, 1261, 1378
TseI	GCWGC	6 cut(s)	524, 527, 530, 633, 1430, 1460
Tsp45I	GTSAC	3 cut(s)	877, 1261, 1378
TspDTI	ATGAA	1 cut(s)	458
TspGWI	ACGGA	1 cut(s)	197
TspRI	CASTG	4 cut(s)	174, 718, 916, 1345
Van91I	CCANNNNNTGG	1 cut(s)	515
VpaK11BI	GGWCC	1 cut(s)	1002
XagI	CCTNNNNNAGG	1 cut(s)	293
XapI	RAATTY	4 cut(s)	241, 264, 423, 1506
XcmI	CCANNNNNNNNNTGG	1 cut(s)	286
XmiI	GTMKAC	2 cut(s)	805, 1191
XspI	CTAG	2 cut(s)	764, 821
ZrmI	AGTACT	1 cut(s)	782

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.