Belongs to the argonaute family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ArgoN | PF16486 | 106 - 241 | 1.2e-35 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 252 - 300 | 2.7e-18 | Argonaute linker 1 domain |
| PAZ | PF02170 | 325 - 436 | 2.6e-25 | PAZ domain |
| ArgoL2 | PF16488 | 446 - 496 | 1.8e-09 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 507 - 584 | 1.7e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 596 - 898 | 3.5e-99 | Piwi domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1406, 1986 |
| AarI | CACCTGC | 1 cut(s) | 2791 |
| Acc36I | ACCTGC | 2 cut(s) | 343, 2791 |
| AccB1I | GGYRCC | 2 cut(s) | 104, 118 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 572 |
| AccI | GTMKAC | 1 cut(s) | 841 |
| AccII | CGCG | 2 cut(s) | 12, 2770 |
| AccIII | TCCGGA | 2 cut(s) | 5, 2893 |
| AclI | AACGTT | 2 cut(s) | 2396, 2756 |
| AclWI | GGATC | 2 cut(s) | 412, 606 |
| AcoI | YGGCCR | 3 cut(s) | 240, 1190, 2108 |
| AcsI | RAATTY | 5 cut(s) | 321, 480, 1415, 1484, 2528 |
| AcuI | CTGAAG | 1 cut(s) | 1763 |
| AcyI | GRCGYC | 4 cut(s) | 105, 119, 236, 263 |
| AfaI | GTAC | 8 cut(s) | 746, 1163, 1701, 1734, 2409, 2494, 2663, 2695 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 302, 352, 427, 572, 1005, 1526, 1527, 2057 |
| AflII | CTTAAG | 1 cut(s) | 1931 |
| AgsI | TTSAA | 8 cut(s) | 326, 683, 902, 1003, 1202, 1218, 1748, 2486 |
| AjnI | CCWGG | 4 cut(s) | 345, 1714, 2488, 2562 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2560, 2592 |
| Alw21I | GWGCWC | 3 cut(s) | 2675, 2818, 2875 |
| Alw26I | GTCTC | 5 cut(s) | 212, 360, 455, 1380, 1872 |
| Alw44I | GTGCAC | 2 cut(s) | 2671, 2871 |
| AlwI | GGATC | 2 cut(s) | 412, 606 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2495 |
| Ama87I | CYCGRG | 3 cut(s) | 132, 1332, 1458 |
| Aor13HI | TCCGGA | 2 cut(s) | 5, 2893 |
| ApaLI | GTGCAC | 2 cut(s) | 2671, 2871 |
| ApoI | RAATTY | 5 cut(s) | 321, 480, 1415, 1484, 2528 |
| AspLEI | GCGC | 3 cut(s) | 107, 121, 2146 |
| AspS9I | GGNCC | 4 cut(s) | 521, 785, 1038, 2355 |
| AsuC2I | CCSGG | 2 cut(s) | 297, 2059 |
| AsuHPI | GGTGA | 8 cut(s) | 289, 442, 815, 925, 1000, 1291, 2144, 2846 |
| AvaI | CYCGRG | 3 cut(s) | 132, 1332, 1458 |
| AvaII | GGWCC | 1 cut(s) | 1038 |
| BaeGI | GKGCMC | 2 cut(s) | 2675, 2875 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2484, 2517 |
| BalI | TGGCCA | 2 cut(s) | 1192, 2110 |
| BanI | GGYRCC | 2 cut(s) | 104, 118 |
| BanII | GRGCYC | 2 cut(s) | 1884, 2890 |
| Bbv12I | GWGCWC | 3 cut(s) | 2675, 2818, 2875 |
| BceAI | ACGGC | 4 cut(s) | 227, 2254, 2559, 2834 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1133, 1167, 2408, 2442 |
| BciT130I | CCWGG | 4 cut(s) | 347, 1716, 2490, 2564 |
| BciVI | GTATCC | 1 cut(s) | 1618 |
| BclI | TGATCA | 2 cut(s) | 1804, 2443 |
| BcnI | CCSGG | 2 cut(s) | 297, 2059 |
| BcoDI | GTCTC | 5 cut(s) | 212, 360, 455, 1380, 1872 |
| BfaI | CTAG | 2 cut(s) | 800, 857 |
| BfmI | CTRYAG | 8 cut(s) | 582, 588, 1086, 2125, 2248, 2287, 2523, 2688 |
| BfoI | RGCGCY | 2 cut(s) | 108, 122 |
| BfrI | CTTAAG | 1 cut(s) | 1931 |
| BfuAI | ACCTGC | 2 cut(s) | 343, 2791 |
| BfuI | GTATCC | 1 cut(s) | 1618 |
| BglII | AGATCT | 2 cut(s) | 890, 2173 |
| BlpI | GCTNAGC | 2 cut(s) | 185, 1761 |
| Bme1390I | CCNGG | 6 cut(s) | 297, 347, 1716, 2059, 2490, 2564 |
| Bme18I | GGWCC | 1 cut(s) | 1038 |
| BmeT110I | CYCGRG | 3 cut(s) | 132, 1332, 1458 |
| BmgT120I | GGNCC | 4 cut(s) | 521, 785, 1038, 2355 |
| BmiI | GGNNCC | 3 cut(s) | 106, 120, 171 |
| BmrFI | CCNGG | 6 cut(s) | 297, 347, 1716, 2059, 2490, 2564 |
| BmsI | GCATC | 7 cut(s) | 416, 1966, 1983, 2158, 2332, 2428, 2729 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1497 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1232, 1264, 2822, 2854 |
| BpmI | CTGGAG | 3 cut(s) | 236, 841, 1585 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 185, 1761 |
| BpuMI | CCSGG | 2 cut(s) | 297, 2059 |
| BsaAI | YACGTR | 1 cut(s) | 2661 |
| BsaHI | GRCGYC | 4 cut(s) | 105, 119, 236, 263 |
| BsaI | GGTCTC | 1 cut(s) | 360 |
| BsaJI | CCNNGG | 8 cut(s) | 19, 243, 296, 540, 1331, 2058, 2563, 2734 |
| BsaWI | WCCGGW | 3 cut(s) | 5, 172, 2893 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 191, 221, 2025, 2055, 2865, 2895 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 302, 352, 427, 572, 1005, 1526, 1527, 2057 |
| Bse118I | RCCGGY | 4 cut(s) | 24, 148, 238, 259 |
| Bse1I | ACTGG | 7 cut(s) | 219, 447, 824, 1040, 1697, 2311, 2866 |
| Bse3DI | GCAATG | 3 cut(s) | 524, 1475, 2238 |
| BseAI | TCCGGA | 2 cut(s) | 5, 2893 |
| BseBI | CCWGG | 4 cut(s) | 347, 1716, 2490, 2564 |
| BseDI | CCNNGG | 8 cut(s) | 19, 243, 296, 540, 1331, 2058, 2563, 2734 |
| BseGI | GGATG | 6 cut(s) | 1674, 1711, 2047, 2068, 2347, 2840 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 302, 352, 427, 572, 1005, 1526, 1527, 2057 |
| BseMI | GCAATG | 3 cut(s) | 524, 1475, 2238 |
| BseMII | CTCAG | 8 cut(s) | 176, 768, 909, 1750, 1775, 1883, 2187, 2499 |
| BseNI | ACTGG | 7 cut(s) | 219, 447, 824, 1040, 1697, 2311, 2866 |
| BseSI | GKGCMC | 2 cut(s) | 2675, 2875 |
| BseX3I | CGGCCG | 1 cut(s) | 240 |
| BseYI | CCCAGC | 2 cut(s) | 852, 957 |
| BsgI | GTGCAG | 2 cut(s) | 371, 2793 |
| Bsh1236I | CGCG | 2 cut(s) | 12, 2770 |
| Bsh1285I | CGRYCG | 5 cut(s) | 43, 243, 312, 2011, 2681 |
| BshNI | GGYRCC | 2 cut(s) | 104, 118 |
| BsiEI | CGRYCG | 5 cut(s) | 43, 243, 312, 2011, 2681 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2675, 2818, 2875 |
| BsiHKCI | CYCGRG | 3 cut(s) | 132, 1332, 1458 |
| BsiWI | CGTACG | 1 cut(s) | 2661 |
| BslFI | GGGAC | 4 cut(s) | 319, 1046, 1113, 1349 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 302, 352, 427, 572, 1005, 1526, 1527, 2057 |
| BsmAI | GTCTC | 5 cut(s) | 212, 360, 455, 1380, 1872 |
| BsmBI | CGTCTC | 3 cut(s) | 212, 455, 1380 |
| BsmFI | GGGAC | 4 cut(s) | 319, 1046, 1113, 1349 |
| Bso31I | GGTCTC | 1 cut(s) | 360 |
| BsoBI | CYCGRG | 3 cut(s) | 132, 1332, 1458 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1884, 2675, 2818, 2875, 2890 |
| Bsp13I | TCCGGA | 2 cut(s) | 5, 2893 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 185, 1761 |
| BspCNI | CTCAG | 8 cut(s) | 177, 769, 910, 1749, 1774, 1882, 2188, 2500 |
| BspEI | TCCGGA | 2 cut(s) | 5, 2893 |
| BspFNI | CGCG | 2 cut(s) | 12, 2770 |
| BspLI | GGNNCC | 3 cut(s) | 106, 120, 171 |
| BspMAI | CTGCAG | 3 cut(s) | 586, 592, 1090 |
| BspMI | ACCTGC | 2 cut(s) | 343, 2791 |
| BspPI | GGATC | 2 cut(s) | 412, 606 |
| BspQI | GCTCTTC | 1 cut(s) | 497 |
| BspT107I | GGYRCC | 2 cut(s) | 104, 118 |
| BspTI | CTTAAG | 1 cut(s) | 1931 |
| BspTNI | GGTCTC | 1 cut(s) | 360 |
| BsrDI | GCAATG | 3 cut(s) | 524, 1475, 2238 |
| BsrFI | RCCGGY | 4 cut(s) | 24, 148, 238, 259 |
| BsrI | ACTGG | 7 cut(s) | 219, 447, 824, 1040, 1697, 2311, 2866 |
| BssAI | RCCGGY | 4 cut(s) | 24, 148, 238, 259 |
| BssECI | CCNNGG | 8 cut(s) | 19, 243, 296, 540, 1331, 2058, 2563, 2734 |
| BssNI | GRCGYC | 4 cut(s) | 105, 119, 236, 263 |
| BssT1I | CCWWGG | 2 cut(s) | 540, 2734 |
| Bst2UI | CCWGG | 4 cut(s) | 347, 1716, 2490, 2564 |
| Bst6I | CTCTTC | 1 cut(s) | 497 |
| BstACI | GRCGYC | 4 cut(s) | 105, 119, 236, 263 |
| BstAFI | CTTAAG | 1 cut(s) | 1931 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2093 |
| BstBAI | YACGTR | 1 cut(s) | 2661 |
| BstDSI | CCRYGG | 1 cut(s) | 243 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 350 |
| BstF5I | GGATG | 6 cut(s) | 1674, 1711, 2047, 2068, 2347, 2840 |
| BstFNI | CGCG | 2 cut(s) | 12, 2770 |
| BstH2I | RGCGCY | 2 cut(s) | 108, 122 |
| BstHHI | GCGC | 3 cut(s) | 107, 121, 2146 |
| BstMAI | GTCTC | 5 cut(s) | 212, 360, 455, 1380, 1872 |
| BstMCI | CGRYCG | 5 cut(s) | 43, 243, 312, 2011, 2681 |
| BstNI | CCWGG | 4 cut(s) | 347, 1716, 2490, 2564 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1497 |
| BstSCI | CCNGG | 6 cut(s) | 295, 345, 1714, 2057, 2488, 2562 |
| BstSFI | CTRYAG | 8 cut(s) | 582, 588, 1086, 2125, 2248, 2287, 2523, 2688 |
| BstSLI | GKGCMC | 2 cut(s) | 2675, 2875 |
| BstSNI | TACGTA | 1 cut(s) | 2661 |
| BstUI | CGCG | 2 cut(s) | 12, 2770 |
| BstX2I | RGATCY | 3 cut(s) | 417, 890, 2173 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1496 |
| BstYI | RGATCY | 3 cut(s) | 417, 890, 2173 |
| BstZI | CGGCCG | 1 cut(s) | 240 |
| BsuI | GTATCC | 1 cut(s) | 1618 |
| BtgI | CCRYGG | 1 cut(s) | 243 |
| BtsCI | GGATG | 6 cut(s) | 1674, 1711, 2047, 2068, 2347, 2840 |
| BtsI | GCAGTG | 3 cut(s) | 1538, 2616, 2781 |
| BveI | ACCTGC | 2 cut(s) | 343, 2791 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2495 |
| CfoI | GCGC | 3 cut(s) | 107, 121, 2146 |
| Cfr10I | RCCGGY | 4 cut(s) | 24, 148, 238, 259 |
| Cfr13I | GGNCC | 4 cut(s) | 521, 785, 1038, 2355 |
| CseI | GACGC | 4 cut(s) | 18, 244, 252, 472 |
| CsiI | ACCWGGT | 1 cut(s) | 2488 |
| Csp6I | GTAC | 8 cut(s) | 745, 1162, 1700, 1733, 2408, 2493, 2662, 2694 |
| CviAII | CATG | 7 cut(s) | 499, 1490, 1540, 2213, 2333, 2552, 2591 |
| CviQI | GTAC | 8 cut(s) | 745, 1162, 1700, 1733, 2408, 2493, 2662, 2694 |
| DinI | GGCGCC | 2 cut(s) | 106, 120 |
| DraI | TTTAAA | 1 cut(s) | 1971 |
| EaeI | YGGCCR | 3 cut(s) | 240, 1190, 2108 |
| EagI | CGGCCG | 1 cut(s) | 240 |
| Eam1104I | CTCTTC | 1 cut(s) | 497 |
| EarI | CTCTTC | 1 cut(s) | 497 |
| EciI | GGCGGA | 1 cut(s) | 105 |
| EclXI | CGGCCG | 1 cut(s) | 240 |
| Eco105I | TACGTA | 1 cut(s) | 2661 |
| Eco130I | CCWWGG | 2 cut(s) | 540, 2734 |
| Eco24I | GRGCYC | 2 cut(s) | 1884, 2890 |
| Eco31I | GGTCTC | 1 cut(s) | 360 |
| Eco47I | GGWCC | 1 cut(s) | 1038 |
| Eco52I | CGGCCG | 1 cut(s) | 240 |
| Eco57I | CTGAAG | 1 cut(s) | 1763 |
| Eco88I | CYCGRG | 3 cut(s) | 132, 1332, 1458 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 350 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2355 |
| EcoRI | GAATTC | 1 cut(s) | 480 |
| EcoRII | CCWGG | 4 cut(s) | 345, 1714, 2488, 2562 |
| EcoT14I | CCWWGG | 2 cut(s) | 540, 2734 |
| EcoT38I | GRGCYC | 2 cut(s) | 1884, 2890 |
| EgeI | GGCGCC | 2 cut(s) | 106, 120 |
| EheI | GGCGCC | 2 cut(s) | 106, 120 |
| ErhI | CCWWGG | 2 cut(s) | 540, 2734 |
| Esp3I | CGTCTC | 3 cut(s) | 212, 455, 1380 |
| FaeI | CATG | 7 cut(s) | 502, 1493, 1543, 2216, 2336, 2555, 2594 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 983, 1015, 1099, 1131, 1386, 1418 |
| FaqI | GGGAC | 4 cut(s) | 319, 1046, 1113, 1349 |
| FatI | CATG | 7 cut(s) | 498, 1489, 1539, 2212, 2332, 2551, 2590 |
| FauI | CCCGC | 1 cut(s) | 999 |
| FbaI | TGATCA | 2 cut(s) | 1804, 2443 |
| FblI | GTMKAC | 1 cut(s) | 841 |
| FokI | GGATG | 6 cut(s) | 1681, 1698, 2034, 2075, 2354, 2827 |
| FriOI | GRGCYC | 2 cut(s) | 1884, 2890 |
| FspBI | CTAG | 2 cut(s) | 800, 857 |
| GlaI | GCGC | 3 cut(s) | 106, 120, 2145 |
| GsaI | CCCAGC | 2 cut(s) | 856, 961 |
| GsuI | CTGGAG | 3 cut(s) | 236, 841, 1585 |
| HaeII | RGCGCY | 2 cut(s) | 108, 122 |
| HgaI | GACGC | 4 cut(s) | 18, 244, 252, 472 |
| HhaI | GCGC | 3 cut(s) | 107, 121, 2146 |
| Hin1I | GRCGYC | 4 cut(s) | 105, 119, 236, 263 |
| Hin1II | CATG | 7 cut(s) | 502, 1493, 1543, 2216, 2336, 2555, 2594 |
| Hin6I | GCGC | 3 cut(s) | 105, 119, 2144 |
| HinP1I | GCGC | 3 cut(s) | 105, 119, 2144 |
| HincII | GTYRAC | 3 cut(s) | 210, 1325, 2503 |
| HindII | GTYRAC | 3 cut(s) | 210, 1325, 2503 |
| HinfI | GANTC | 7 cut(s) | 124, 1397, 1814, 2209, 2559, 2613, 2837 |
| HphI | GGTGA | 8 cut(s) | 289, 442, 815, 925, 1000, 1291, 2144, 2846 |
| Hpy188I | TCNGA | 7 cut(s) | 332, 460, 739, 2197, 2463, 2845, 2885 |
| Hpy99I | CGWCG | 8 cut(s) | 226, 229, 232, 235, 238, 268, 271, 2275 |
| HpyCH4IV | ACGT | 4 cut(s) | 1327, 2396, 2660, 2756 |
| HpySE526I | ACGT | 4 cut(s) | 1327, 2396, 2660, 2756 |
| Hsp92I | GRCGYC | 4 cut(s) | 105, 119, 236, 263 |
| Hsp92II | CATG | 7 cut(s) | 502, 1493, 1543, 2216, 2336, 2555, 2594 |
| HspAI | GCGC | 3 cut(s) | 105, 119, 2144 |
| KasI | GGCGCC | 2 cut(s) | 104, 118 |
| Kpn2I | TCCGGA | 2 cut(s) | 5, 2893 |
| KroI | GCCGGC | 3 cut(s) | 24, 238, 259 |
| KroNI | GCCGGC | 3 cut(s) | 26, 240, 261 |
| Ksp22I | TGATCA | 2 cut(s) | 1804, 2443 |
| LguI | GCTCTTC | 1 cut(s) | 497 |
| LmnI | GCTCC | 5 cut(s) | 118, 175, 199, 1240, 2033 |
| LweI | GCATC | 7 cut(s) | 416, 1966, 1983, 2158, 2332, 2428, 2729 |
| MabI | ACCWGGT | 1 cut(s) | 2488 |
| MaeI | CTAG | 2 cut(s) | 800, 857 |
| MaeII | ACGT | 4 cut(s) | 1327, 2396, 2660, 2756 |
| MaeIII | GTNAC | 9 cut(s) | 385, 913, 1297, 2002, 2041, 2116, 2328, 2392, 2834 |
| MboII | GAAGA | 6 cut(s) | 514, 1003, 1061, 1133, 1840, 2002 |
| MfeI | CAATTG | 2 cut(s) | 1251, 2133 |
| MflI | RGATCY | 3 cut(s) | 417, 890, 2173 |
| MhlI | GDGCHC | 5 cut(s) | 1884, 2675, 2818, 2875, 2890 |
| MlsI | TGGCCA | 2 cut(s) | 1192, 2110 |
| MluNI | TGGCCA | 2 cut(s) | 1192, 2110 |
| Mly113I | GGCGCC | 2 cut(s) | 105, 119 |
| MlyI | GAGTC | 2 cut(s) | 118, 2831 |
| Mox20I | TGGCCA | 2 cut(s) | 1192, 2110 |
| MreI | CGCCGGCG | 1 cut(s) | 259 |
| MroI | TCCGGA | 2 cut(s) | 5, 2893 |
| MroNI | GCCGGC | 3 cut(s) | 24, 238, 259 |
| MscI | TGGCCA | 2 cut(s) | 1192, 2110 |
| MslI | CAYNNNNRTG | 6 cut(s) | 381, 911, 1494, 2154, 2157, 2589 |
| Msp20I | TGGCCA | 2 cut(s) | 1192, 2110 |
| MspA1I | CMGCKG | 2 cut(s) | 87, 587 |
| MspCI | CTTAAG | 1 cut(s) | 1931 |
| MspR9I | CCNGG | 6 cut(s) | 297, 347, 1716, 2059, 2490, 2564 |
| MunI | CAATTG | 2 cut(s) | 1251, 2133 |
| MvaI | CCWGG | 4 cut(s) | 347, 1716, 2490, 2564 |
| MvnI | CGCG | 2 cut(s) | 12, 2770 |
| NaeI | GCCGGC | 3 cut(s) | 26, 240, 261 |
| NarI | GGCGCC | 2 cut(s) | 105, 119 |
| NciI | CCSGG | 2 cut(s) | 297, 2059 |
| NgoMIV | GCCGGC | 3 cut(s) | 24, 238, 259 |
| NlaIII | CATG | 7 cut(s) | 502, 1493, 1543, 2216, 2336, 2555, 2594 |
| NlaIV | GGNNCC | 3 cut(s) | 106, 120, 171 |
| NmeAIII | GCCGAG | 2 cut(s) | 44, 146 |
| NmuCI | GTSAC | 5 cut(s) | 913, 1297, 2002, 2116, 2834 |
| PaeR7I | CTCGAG | 2 cut(s) | 132, 1458 |
| PaqCI | CACCTGC | 1 cut(s) | 2791 |
| PciSI | GCTCTTC | 1 cut(s) | 497 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 16, 227, 230 |
| PdiI | GCCGGC | 3 cut(s) | 26, 240, 261 |
| PfeI | GAWTC | 5 cut(s) | 1397, 1814, 2209, 2559, 2613 |
| Pfl23II | CGTACG | 1 cut(s) | 2661 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 572 |
| PfoI | TCCNGGA | 1 cut(s) | 1714 |
| Ple19I | CGATCG | 2 cut(s) | 2011, 2681 |
| PleI | GAGTC | 2 cut(s) | 118, 2831 |
| PluTI | GGCGCC | 2 cut(s) | 108, 122 |
| PpsI | GAGTC | 2 cut(s) | 118, 2831 |
| Ppu21I | YACGTR | 1 cut(s) | 2661 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1497 |
| PsiI | TTATAA | 2 cut(s) | 1406, 1986 |
| Psp1406I | AACGTT | 2 cut(s) | 2396, 2756 |
| Psp6I | CCWGG | 4 cut(s) | 345, 1714, 2488, 2562 |
| PspFI | CCCAGC | 2 cut(s) | 852, 957 |
| PspGI | CCWGG | 4 cut(s) | 345, 1714, 2488, 2562 |
| PspLI | CGTACG | 1 cut(s) | 2661 |
| PspN4I | GGNNCC | 3 cut(s) | 106, 120, 171 |
| PspPI | GGNCC | 4 cut(s) | 521, 785, 1038, 2355 |
| PspXI | VCTCGAGB | 2 cut(s) | 132, 1458 |
| PstI | CTGCAG | 3 cut(s) | 586, 592, 1090 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2495 |
| PsuI | RGATCY | 3 cut(s) | 417, 890, 2173 |
| PvuI | CGATCG | 2 cut(s) | 2011, 2681 |
| PvuII | CAGCTG | 1 cut(s) | 587 |
| RsaI | GTAC | 8 cut(s) | 746, 1163, 1701, 1734, 2409, 2494, 2663, 2695 |
| RsaNI | GTAC | 8 cut(s) | 745, 1162, 1700, 1733, 2408, 2493, 2662, 2694 |
| RseI | CAYNNNNRTG | 6 cut(s) | 381, 911, 1494, 2154, 2157, 2589 |
| SapI | GCTCTTC | 1 cut(s) | 497 |
| Sau96I | GGNCC | 4 cut(s) | 521, 785, 1038, 2355 |
| SchI | GAGTC | 2 cut(s) | 118, 2831 |
| ScrFI | CCNGG | 6 cut(s) | 297, 347, 1716, 2059, 2490, 2564 |
| SduI | GDGCHC | 5 cut(s) | 1884, 2675, 2818, 2875, 2890 |
| SexAI | ACCWGGT | 1 cut(s) | 2488 |
| SfaNI | GCATC | 7 cut(s) | 416, 1966, 1983, 2158, 2332, 2428, 2729 |
| SfcI | CTRYAG | 8 cut(s) | 582, 588, 1086, 2125, 2248, 2287, 2523, 2688 |
| SfoI | GGCGCC | 2 cut(s) | 106, 120 |
| Sfr274I | CTCGAG | 2 cut(s) | 132, 1458 |
| SgrAI | CRCCGGYG | 2 cut(s) | 148, 259 |
| SinI | GGWCC | 1 cut(s) | 1038 |
| SlaI | CTCGAG | 2 cut(s) | 132, 1458 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 381, 911, 1494, 2154, 2157, 2589 |
| SmlI | CTYRAG | 3 cut(s) | 132, 1458, 1931 |
| SmoI | CTYRAG | 3 cut(s) | 132, 1458, 1931 |
| SnaBI | TACGTA | 1 cut(s) | 2661 |
| SspDI | GGCGCC | 2 cut(s) | 104, 118 |
| SspI | AATATT | 5 cut(s) | 874, 1148, 1351, 1913, 2482 |
| SspMI | CTAG | 2 cut(s) | 800, 857 |
| StyD4I | CCNGG | 6 cut(s) | 295, 345, 1714, 2057, 2488, 2562 |
| StyI | CCWWGG | 2 cut(s) | 540, 2734 |
| TaiI | ACGT | 4 cut(s) | 1330, 2399, 2663, 2759 |
| TaqI | TCGA | 6 cut(s) | 133, 269, 601, 1459, 2273, 2812 |
| TaqII | GACCGA | 1 cut(s) | 2021 |
| TatI | WGTACW | 3 cut(s) | 744, 1161, 1699 |
| TauI | GCSGC | 6 cut(s) | 15, 72, 90, 110, 155, 259 |
| TfiI | GAWTC | 5 cut(s) | 1397, 1814, 2209, 2559, 2613 |
| TseFI | GTSAC | 5 cut(s) | 913, 1297, 2002, 2116, 2834 |
| Tsp45I | GTSAC | 5 cut(s) | 913, 1297, 2002, 2116, 2834 |
| TspDTI | ATGAA | 5 cut(s) | 449, 515, 1806, 2175, 2201 |
| TspGWI | ACGGA | 1 cut(s) | 2117 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 572 |
| Vha464I | CTTAAG | 1 cut(s) | 1931 |
| VneI | GTGCAC | 2 cut(s) | 2671, 2871 |
| VpaK11BI | GGWCC | 1 cut(s) | 1038 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 350 |
| XapI | RAATTY | 5 cut(s) | 321, 480, 1415, 1484, 2528 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 343 |
| XhoI | CTCGAG | 2 cut(s) | 132, 1458 |
| XmiI | GTMKAC | 1 cut(s) | 841 |
| XspI | CTAG | 2 cut(s) | 800, 857 |