U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G13490 |
| malus_domestica | MD04G1065100.v1.1 MD13G1167400.v1.1 MD15G1349300.v1.1 MD16G1167800.v1.1 MD17G1282000.v1.1 |
| prunus_persica | Prupe.1G134800_v2.0.a1 Prupe.1G134800_v2.0.a1 Prupe.1G134800_v2.0.a1 Prupe.1G134800_v2.0.a1 |
| pyrus_communis | pycom13g14310 pycom16g14140 |
| rosa_chinensis | RchiOBHm_Chr4g0422741 RchiOBHm_Chr7g0217821 |
| rosa_multiflora | Rmu_sc0000148.1_g000034 Rmu_sc0000279.1_g000006 Rmu_sc0024030.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00364630 |
| rosa_rugosa | Rorug03G0187100 Rorug04G0181200 Rorug04G0181200 Rorug04G0181300 Rorug04G0181300 Rorug05G0456000 Rorug05G0495600 |
| rosa_samantha | Rh2AG094300 Rh2AG227700 Rh2AG249200 Rh2AG249700 Rh2CG309900 Rh2DG285800 Rh2DG391200 Rh2DG399500 Rh3AG163000 Rh3CG178400 Rh3DG040700 Rh4AG241600 Rh4BG245000 Rh4BG245100 Rh4CG177600 Rh4CG255000 Rh4CG255600 Rh4DG239500 Rh6AG317700 Rh6DG255100 Rh6DG351700 Rh7BG360400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 47 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 88, 133 |
| AluBI | AGCT | 1 cut(s) | 76 |
| AluI | AGCT | 1 cut(s) | 76 |
| Alw21I | GWGCWC | 1 cut(s) | 78 |
| BanII | GRGCYC | 1 cut(s) | 78 |
| Bbv12I | GWGCWC | 1 cut(s) | 78 |
| BceAI | ACGGC | 1 cut(s) | 144 |
| BfmI | CTRYAG | 2 cut(s) | 117, 140 |
| BmsI | GCATC | 1 cut(s) | 175 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 88, 133 |
| BseGI | GGATG | 1 cut(s) | 97 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 88, 133 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BsiHKAI | GWGCWC | 1 cut(s) | 78 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 88, 133 |
| Bsp1286I | GDGCHC | 1 cut(s) | 78 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| Bst4CI | ACNGT | 1 cut(s) | 113 |
| BstDEI | CTNAG | 1 cut(s) | 87 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 86 |
| BstF5I | GGATG | 1 cut(s) | 97 |
| BstSFI | CTRYAG | 2 cut(s) | 117, 140 |
| BtsCI | GGATG | 1 cut(s) | 97 |
| Csp6I | GTAC | 1 cut(s) | 46 |
| CviAII | CATG | 3 cut(s) | 71, 133, 170 |
| CviJI | RGCY | 3 cut(s) | 63, 76, 139 |
| CviKI_1 | RGCY | 3 cut(s) | 63, 76, 139 |
| CviQI | GTAC | 1 cut(s) | 46 |
| DdeI | CTNAG | 1 cut(s) | 87 |
| Ecl136II | GAGCTC | 1 cut(s) | 76 |
| Eco24I | GRGCYC | 1 cut(s) | 78 |
| Eco53kI | GAGCTC | 1 cut(s) | 76 |
| EcoICRI | GAGCTC | 1 cut(s) | 76 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 86 |
| EcoT38I | GRGCYC | 1 cut(s) | 78 |
| FaeI | CATG | 3 cut(s) | 74, 136, 173 |
| FaiI | YATR | 8 cut(s) | 51, 72, 98, 105, 119, 134, 152, 171 |
| FatI | CATG | 3 cut(s) | 70, 132, 169 |
| FokI | GGATG | 1 cut(s) | 104 |
| FriOI | GRGCYC | 1 cut(s) | 78 |
| Hin1II | CATG | 3 cut(s) | 74, 136, 173 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 1 cut(s) | 113 |
| HpyCH4V | TGCA | 1 cut(s) | 166 |
| HpyF3I | CTNAG | 1 cut(s) | 87 |
| Hsp92II | CATG | 3 cut(s) | 74, 136, 173 |
| LpnPI | CCDG | 2 cut(s) | 78, 128 |
| LweI | GCATC | 1 cut(s) | 175 |
| MhlI | GDGCHC | 1 cut(s) | 78 |
| MluCI | AATT | 2 cut(s) | 13, 24 |
| MnlI | CCTC | 3 cut(s) | 36, 82, 100 |
| MslI | CAYNNNNRTG | 1 cut(s) | 171 |
| NlaIII | CATG | 3 cut(s) | 74, 136, 173 |
| Psp124BI | GAGCTC | 1 cut(s) | 78 |
| RsaI | GTAC | 1 cut(s) | 47 |
| RsaNI | GTAC | 1 cut(s) | 46 |
| RseI | CAYNNNNRTG | 1 cut(s) | 171 |
| SacI | GAGCTC | 1 cut(s) | 78 |
| SduI | GDGCHC | 1 cut(s) | 78 |
| SetI | ASST | 3 cut(s) | 47, 78, 84 |
| SfaNI | GCATC | 1 cut(s) | 175 |
| SfcI | CTRYAG | 2 cut(s) | 117, 140 |
| SgeI | CNNG | 7 cut(s) | 69, 77, 83, 89, 140, 145, 155 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 171 |
| Sse9I | AATT | 2 cut(s) | 13, 24 |
| SstI | GAGCTC | 1 cut(s) | 78 |
| TaaI | ACNGT | 1 cut(s) | 113 |
| TaqI | TCGA | 1 cut(s) | 78 |
| TasI | AATT | 2 cut(s) | 13, 24 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 86 |