MD04G1140700.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000638
Physical Location & Seq
Reverse (-)
22899850 .. 22902446
2597 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1140700.v1.1.491

Sequence Viewer

Length: 1476 bp
ATGGAGCAACAACAACAAAATTCACACGTAGTATTGCTGCCCTTACCATCACAAGGGCACTTCACTCCCATGCTAAGTTTGGCACAGCTGCTCTGCCACGCTGGCATCCATGTCACCTTCCTCATCACCAAGCACAGCCACAGTCTCTTCACCCAGCGCGACGCCCTCTCTGCCCGCTTCCCAACCCTCCACTTCGAGTCTATCCCTGACGGCCTCCCACCGGACCACGGACGCAAATTTTCTGCCCTACACGAAGTGGGTGCGTCGCTTAGGTCCACAATTAAGCCGTTTCTGCGCGAACTGCTCATCTCCCTAACCAAAAAAGACGACGAGACGTCTAATGATGGCTCTACTCGCCGGCGGCTTCCTCCTTTGCGTTGTATGGTAATAGATGGGATATTTATGTGCTTTGCAATTGATGTGGCTGAGGAGGTGGGAATTCCCATATTTGCCCTTCGCACAACAAGCGCTTGCAGCTTCTGGTGTTATACATGCATTCCCGACCTCATTCAACAAGGCCAGCTTCCCTTCCAAGGTGATCACTGTCACTCTTCTTCCCATGAGGACATGGATCAGCCGATTAGGGATATTCCGGGGATGGAAAGTCTTTTGAGACGTCGAGATCTACCGAGTTTTTGCAAAATGCCAATCGACCATCCAACTTTTAAATTTTTCGTGGAGGAGTTTGAGGCCATTACTCGAGTTTCTGCTCTCATACTCAACACCTTCGATGACCTCGAGTCCCCAATACTCTCCCACATCGCCACTCGCTTTCCCAAAATTTACACCTTAGGCCCTTTCCATGCTCTTCTCAAATCTCGCATAGGAAACGATCTATCATCCTCCGCTTCCTCCTTGCGCCACCAAGACCGACGTTGCATGACTTGGCTCGACTCCCAACAATTGCGGTCCGTTATTTTCGTCAGCTTTGGGAGTTTGGTAAAGCTAACACGTGTCCAGTTACTTGAGTTTTGGCACGGTCTAATCGACAGTGGCAAACCCTTTCTGTGGGTAATACGGTCGGATATGCTTTGGAATGAGCAAGAAGCGCATGCAACTTCGGTAAAGTTAGAGGTTGGTACTAAAGAAAAGGGGTTTATAGCAGAGTGGGTCCCACAAGAAGAGGTACTGGCCCACAAAGCTATCGGAGGGTTTTTGACCCACAGCGGCTGGAACTCGACGATTGAGGGCATTTGGGCTGGAGTTCCAATGCTTTGTTGGCCTCAAATAGCAGACCAACCAGTGAATAGTAGATGGGTTGGTGAGGGTTGGAAGATCGGGCTCGATATGAAGGACACGTGTGATAGGTCTACGGTGGAGAAGATGGTAAGAGCATTGATGGAAGAAGGTGATCGAAGCGCGCAGATTTTCAAGTCGGTGGATACGTTTGCAAAGTTGGCTCGCCATGCAGTTAATGAAGATGGCTCTTCATATAAAAACCTAGAAAAACTTATTGAAGACGTAAAAAAATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

492

Amino Acids

55.57

Weight (kDa)

6.31

Isoelectric Point (pI)

52.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 244 - 425 2e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 338, 619
AccI GTMKAC 1 cut(s) 1310
AccII CGCG 3 cut(s) 159, 297, 1361
AciI CCGC 5 cut(s) 175, 361, 846, 907, 1167
AclWI GGATC 1 cut(s) 579
AcsI RAATTY 5 cut(s) 19, 236, 438, 668, 780
AcvI CACGTG 2 cut(s) 953, 1299
AcyI GRCGYC 3 cut(s) 162, 335, 616
AdeI CACNNNGTG 1 cut(s) 256
AfaI GTAC 2 cut(s) 1081, 1128
AfeI AGCGCT 1 cut(s) 469
AfiI CCNNNNNNNGG 5 cut(s) 53, 220, 227, 533, 1008
AflIII ACRYGT 5 cut(s) 25, 950, 952, 1296, 1298
AgsI TTSAA 3 cut(s) 512, 1372, 1457
AhdI GACNNNNNGTC 2 cut(s) 334, 739
AluBI AGCT 6 cut(s) 88, 477, 523, 927, 946, 1142
AluI AGCT 6 cut(s) 88, 477, 523, 927, 946, 1142
Alw26I GTCTC 3 cut(s) 149, 326, 607
AlwI GGATC 1 cut(s) 579
AlwNI CAGNNNCTG 2 cut(s) 480, 1170
Ama87I CYCGRG 2 cut(s) 699, 737
Aor51HI AGCGCT 1 cut(s) 469
AoxI GGCC 6 cut(s) 211, 517, 690, 793, 1131, 1220
ApeKI GCWGC 3 cut(s) 37, 88, 474
ApoI RAATTY 5 cut(s) 19, 236, 438, 668, 780
AspLEI GCGC 7 cut(s) 159, 297, 470, 861, 1051, 1361, 1363
AspS9I GGNCC 6 cut(s) 223, 273, 794, 909, 1111, 1132
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 6 cut(s) 106, 118, 142, 548, 1274, 1361
AvaI CYCGRG 2 cut(s) 699, 737
AvaII GGWCC 4 cut(s) 223, 273, 909, 1111
AxyI CCTNAGG 1 cut(s) 790
BaeGI GKGCMC 1 cut(s) 60
BanII GRGCYC 1 cut(s) 1284
BbrPI CACGTG 2 cut(s) 953, 1299
BbsI GAAGAC 1 cut(s) 1464
BbvCI CCTCAGC 1 cut(s) 426
BbvI GCAGC 3 cut(s) 24, 75, 486
BccI CCATC 9 cut(s) 55, 338, 386, 592, 663, 1248, 1318, 1333, 1415
BceAI ACGGC 2 cut(s) 226, 271
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BciVI GTATCC 1 cut(s) 1375
BclI TGATCA 1 cut(s) 538
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 3 cut(s) 149, 326, 607
BfaI CTAG 1 cut(s) 1442
BfoI RGCGCY 1 cut(s) 471
BfuI GTATCC 1 cut(s) 1375
BglI GCCNNNNNGGC 1 cut(s) 102
BglII AGATCT 1 cut(s) 622
BisI GCNGC 5 cut(s) 38, 89, 362, 475, 1168
BlsI GCNGC 5 cut(s) 39, 90, 363, 476, 1169
Bme1390I CCNGG 1 cut(s) 594
Bme18I GGWCC 4 cut(s) 223, 273, 909, 1111
BmeRI GACNNNNNGTC 2 cut(s) 334, 739
BmeT110I CYCGRG 2 cut(s) 699, 737
BmgT120I GGNCC 6 cut(s) 223, 273, 794, 909, 1111, 1132
BmiI GGNNCC 2 cut(s) 1112, 1113
BmrFI CCNGG 1 cut(s) 594
BmsI GCATC 1 cut(s) 114
BpiI GAAGAC 1 cut(s) 1464
BpmI CTGGAG 1 cut(s) 1221
Bpu10I CCTNAGC 2 cut(s) 269, 426
BpuEI CTTGAG 1 cut(s) 986
BpuMI CCSGG 1 cut(s) 594
BsaAI YACGTR 3 cut(s) 28, 953, 1299
BsaHI GRCGYC 3 cut(s) 162, 335, 616
BsaJI CCNNGG 3 cut(s) 226, 532, 593
BsaWI WCCGGW 1 cut(s) 220
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 220, 227, 533, 1008
Bse118I RCCGGY 1 cut(s) 357
Bse1I ACTGG 3 cut(s) 958, 1134, 1241
Bse21I CCTNAGG 1 cut(s) 790
BseDI CCNNGG 3 cut(s) 226, 532, 593
BseGI GGATG 4 cut(s) 105, 603, 655, 839
BseLI CCNNNNNNNGG 5 cut(s) 53, 220, 227, 533, 1008
BseMII CTCAG 1 cut(s) 417
BseNI ACTGG 3 cut(s) 958, 1134, 1241
BsePI GCGCGC 1 cut(s) 1359
BseRI GAGGAG 2 cut(s) 443, 695
BseSI GKGCMC 1 cut(s) 60
BseXI GCAGC 3 cut(s) 24, 75, 486
BseYI CCCAGC 1 cut(s) 153
Bsh1236I CGCG 3 cut(s) 159, 297, 1361
Bsh1285I CGRYCG 1 cut(s) 1022
BshFI GGCC 6 cut(s) 213, 519, 692, 795, 1133, 1222
BsiEI CGRYCG 1 cut(s) 1022
BsiHKCI CYCGRG 2 cut(s) 699, 737
BsiSI CCGG 3 cut(s) 221, 358, 593
BslFI GGGAC 2 cut(s) 727, 1097
BslI CCNNNNNNNGG 5 cut(s) 53, 220, 227, 533, 1008
BsmAI GTCTC 3 cut(s) 149, 326, 607
BsmBI CGTCTC 2 cut(s) 326, 607
BsmFI GGGAC 2 cut(s) 727, 1097
BsmI GAATGC 1 cut(s) 495
BsnI GGCC 6 cut(s) 213, 519, 692, 795, 1133, 1222
BsoBI CYCGRG 2 cut(s) 699, 737
Bsp1286I GDGCHC 2 cut(s) 60, 1284
Bsp143I GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
BspACI CCGC 5 cut(s) 175, 361, 846, 907, 1167
BspANI GGCC 6 cut(s) 213, 519, 692, 795, 1133, 1222
BspCNI CTCAG 1 cut(s) 418
BspFNI CGCG 3 cut(s) 159, 297, 1361
BspLI GGNNCC 2 cut(s) 1112, 1113
BspPI GGATC 1 cut(s) 579
BspQI GCTCTTC 2 cut(s) 813, 1432
BsrFI RCCGGY 1 cut(s) 357
BsrI ACTGG 3 cut(s) 958, 1134, 1241
BssAI RCCGGY 1 cut(s) 357
BssECI CCNNGG 3 cut(s) 226, 532, 593
BssHII GCGCGC 1 cut(s) 1359
BssMI GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
BssNI GRCGYC 3 cut(s) 162, 335, 616
BssT1I CCWWGG 1 cut(s) 532
Bst4CI ACNGT 6 cut(s) 143, 545, 980, 992, 1020, 1315
Bst6I CTCTTC 5 cut(s) 152, 556, 813, 1116, 1432
BstACI GRCGYC 3 cut(s) 162, 335, 616
BstBAI YACGTR 3 cut(s) 28, 953, 1299
BstC8I GCNNGC 8 cut(s) 103, 175, 359, 472, 521, 1053, 1361, 1402
BstDEI CTNAG 4 cut(s) 74, 269, 426, 790
BstDSI CCRYGG 1 cut(s) 226
BstF5I GGATG 4 cut(s) 105, 603, 655, 839
BstFNI CGCG 3 cut(s) 159, 297, 1361
BstH2I RGCGCY 1 cut(s) 471
BstHHI GCGC 7 cut(s) 159, 297, 470, 861, 1051, 1361, 1363
BstKTI GATC 6 cut(s) 541, 574, 625, 835, 1278, 1354
BstMAI GTCTC 3 cut(s) 149, 326, 607
BstMBI GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
BstMCI CGRYCG 1 cut(s) 1022
BstNSI RCATGY 2 cut(s) 495, 1055
BstSCI CCNGG 1 cut(s) 592
BstSLI GKGCMC 1 cut(s) 60
BstUI CGCG 3 cut(s) 159, 297, 1361
BstV1I GCAGC 3 cut(s) 24, 75, 486
BstV2I GAAGAC 1 cut(s) 1464
BstX2I RGATCY 1 cut(s) 622
BstYI RGATCY 1 cut(s) 622
Bsu36I CCTNAGG 1 cut(s) 790
BsuI GTATCC 1 cut(s) 1375
BsuRI GGCC 6 cut(s) 213, 519, 692, 795, 1133, 1222
BtgI CCRYGG 1 cut(s) 226
BtgZI GCGATG 1 cut(s) 745
BtsCI GGATG 4 cut(s) 105, 603, 655, 839
BtsIMutI CAGTG 3 cut(s) 541, 997, 1248
Cac8I GCNNGC 8 cut(s) 103, 175, 359, 472, 521, 1053, 1361, 1402
CaiI CAGNNNCTG 2 cut(s) 480, 1170
CfoI GCGC 7 cut(s) 159, 297, 470, 861, 1051, 1361, 1363
Cfr10I RCCGGY 1 cut(s) 357
Cfr13I GGNCC 6 cut(s) 223, 273, 794, 909, 1111, 1132
CpoI CGGWCCG 1 cut(s) 909
CseI GACGC 3 cut(s) 170, 240, 252
Csp6I GTAC 2 cut(s) 1080, 1127
CspCI CAANNNNNGTGG 2 cut(s) 402, 437
CspI CGGWCCG 1 cut(s) 909
CviAII CATG 9 cut(s) 70, 110, 492, 560, 568, 803, 880, 1052, 1406
CviQI GTAC 2 cut(s) 1080, 1127
DdeI CTNAG 4 cut(s) 74, 269, 426, 790
DpnI GATC 6 cut(s) 540, 573, 624, 834, 1277, 1353
DpnII GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
DraI TTTAAA 1 cut(s) 667
DraIII CACNNNGTG 1 cut(s) 256
DriI GACNNNNNGTC 2 cut(s) 334, 739
Eam1104I CTCTTC 5 cut(s) 152, 556, 813, 1116, 1432
Eam1105I GACNNNNNGTC 2 cut(s) 334, 739
EarI CTCTTC 5 cut(s) 152, 556, 813, 1116, 1432
Eco130I CCWWGG 1 cut(s) 532
Eco24I GRGCYC 1 cut(s) 1284
Eco47I GGWCC 4 cut(s) 223, 273, 909, 1111
Eco47III AGCGCT 1 cut(s) 469
Eco72I CACGTG 2 cut(s) 953, 1299
Eco81I CCTNAGG 1 cut(s) 790
Eco88I CYCGRG 2 cut(s) 699, 737
EcoO109I RGGNCCY 2 cut(s) 794, 1111
EcoRI GAATTC 1 cut(s) 438
EcoT14I CCWWGG 1 cut(s) 532
EcoT22I ATGCAT 1 cut(s) 497
EcoT38I GRGCYC 1 cut(s) 1284
ErhI CCWWGG 1 cut(s) 532
Esp3I CGTCTC 2 cut(s) 326, 607
FaeI CATG 9 cut(s) 73, 113, 495, 563, 571, 806, 883, 1055, 1409
FalI AAGNNNNNCTT 2 cut(s) 507, 539
FaqI GGGAC 2 cut(s) 727, 1097
FatI CATG 9 cut(s) 69, 109, 491, 559, 567, 802, 879, 1051, 1405
FauI CCCGC 1 cut(s) 182
FbaI TGATCA 1 cut(s) 538
FblI GTMKAC 1 cut(s) 1310
Fnu4HI GCNGC 5 cut(s) 38, 89, 362, 475, 1168
FokI GGATG 4 cut(s) 92, 610, 642, 826
FriOI GRGCYC 1 cut(s) 1284
Fsp4HI GCNGC 5 cut(s) 38, 89, 362, 475, 1168
FspBI CTAG 1 cut(s) 1442
GlaI GCGC 7 cut(s) 158, 296, 469, 860, 1050, 1360, 1362
GluI GCNGC 5 cut(s) 38, 89, 362, 475, 1168
GsaI CCCAGC 1 cut(s) 157
GsuI CTGGAG 1 cut(s) 1221
HaeII RGCGCY 1 cut(s) 471
HaeIII GGCC 6 cut(s) 213, 519, 692, 795, 1133, 1222
HapII CCGG 3 cut(s) 221, 358, 593
HgaI GACGC 3 cut(s) 170, 240, 252
HhaI GCGC 7 cut(s) 159, 297, 470, 861, 1051, 1361, 1363
Hin1I GRCGYC 3 cut(s) 162, 335, 616
Hin1II CATG 9 cut(s) 73, 113, 495, 563, 571, 806, 883, 1055, 1409
Hin6I GCGC 7 cut(s) 157, 295, 468, 859, 1049, 1359, 1361
HinP1I GCGC 7 cut(s) 157, 295, 468, 859, 1049, 1359, 1361
HinfI GANTC 3 cut(s) 197, 740, 893
HpaII CCGG 3 cut(s) 221, 358, 593
HphI GGTGA 6 cut(s) 106, 118, 142, 548, 1274, 1361
Hpy166II GTNNAC 2 cut(s) 276, 1311
Hpy188I TCNGA 2 cut(s) 1024, 1148
Hpy188III TCNNGA 2 cut(s) 500, 620
Hpy8I GTNNAC 2 cut(s) 276, 1311
Hpy99I CGWCG 6 cut(s) 164, 268, 332, 621, 876, 1183
HpyAV CCTTC 6 cut(s) 127, 464, 538, 736, 1285, 1340
HpyCH4III ACNGT 6 cut(s) 143, 545, 980, 992, 1020, 1315
HpyCH4IV ACGT 8 cut(s) 27, 335, 616, 874, 952, 1298, 1385, 1461
HpyCH4V TGCA 8 cut(s) 413, 474, 495, 639, 879, 1055, 1391, 1409
HpyF3I CTNAG 4 cut(s) 74, 269, 426, 790
HpySE526I ACGT 8 cut(s) 27, 335, 616, 874, 952, 1298, 1385, 1461
Hsp92I GRCGYC 3 cut(s) 162, 335, 616
Hsp92II CATG 9 cut(s) 73, 113, 495, 563, 571, 806, 883, 1055, 1409
HspAI GCGC 7 cut(s) 157, 295, 468, 859, 1049, 1359, 1361
KflI GGGWCCC 1 cut(s) 1111
KroI GCCGGC 1 cut(s) 357
KroNI GCCGGC 1 cut(s) 359
Ksp22I TGATCA 1 cut(s) 538
Kzo9I GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
LguI GCTCTTC 2 cut(s) 813, 1432
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 3 cut(s) 24, 75, 486
LweI GCATC 1 cut(s) 114
MaeI CTAG 1 cut(s) 1442
MaeII ACGT 8 cut(s) 27, 335, 616, 874, 952, 1298, 1385, 1461
MaeIII GTNAC 3 cut(s) 112, 545, 960
MalI GATC 6 cut(s) 540, 573, 624, 834, 1277, 1353
MboI GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
MfeI CAATTG 2 cut(s) 414, 902
MflI RGATCY 1 cut(s) 622
MhlI GDGCHC 2 cut(s) 60, 1284
MluCI AATT 9 cut(s) 19, 236, 279, 414, 438, 668, 780, 902, 1469
MlyI GAGTC 3 cut(s) 206, 749, 887
MmeI TCCRAC 3 cut(s) 683, 1002, 1250
Mph1103I ATGCAT 1 cut(s) 497
MreI CGCCGGCG 1 cut(s) 357
MroNI GCCGGC 1 cut(s) 357
MseI TTAA 3 cut(s) 282, 666, 1413
MslI CAYNNNNRTG 1 cut(s) 68
MspA1I CMGCKG 2 cut(s) 88, 1167
MspI CCGG 3 cut(s) 221, 358, 593
MspR9I CCNGG 1 cut(s) 594
MunI CAATTG 2 cut(s) 414, 902
Mva1269I GAATGC 1 cut(s) 495
MvnI CGCG 3 cut(s) 159, 297, 1361
NaeI GCCGGC 1 cut(s) 359
NciI CCSGG 1 cut(s) 594
NdeII GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
NgoMIV GCCGGC 1 cut(s) 357
NlaIII CATG 9 cut(s) 73, 113, 495, 563, 571, 806, 883, 1055, 1409
NlaIV GGNNCC 2 cut(s) 1112, 1113
NmuCI GTSAC 2 cut(s) 112, 545
NsiI ATGCAT 1 cut(s) 497
NspI RCATGY 2 cut(s) 495, 1055
PaeI GCATGC 1 cut(s) 1055
PaeR7I CTCGAG 2 cut(s) 699, 737
PauI GCGCGC 1 cut(s) 1359
PciSI GCTCTTC 2 cut(s) 813, 1432
PcsI WCGNNNNNNNCGW 3 cut(s) 735, 984, 1382
PctI GAATGC 1 cut(s) 495
PdiI GCCGGC 1 cut(s) 359
PkrI GCNGC 5 cut(s) 39, 90, 363, 476, 1169
PleI GAGTC 3 cut(s) 205, 748, 887
PmaCI CACGTG 2 cut(s) 953, 1299
PmlI CACGTG 2 cut(s) 953, 1299
PpsI GAGTC 3 cut(s) 205, 748, 887
Ppu21I YACGTR 3 cut(s) 28, 953, 1299
PpuMI RGGWCCY 1 cut(s) 1111
Psp5II RGGWCCY 1 cut(s) 1111
PspCI CACGTG 2 cut(s) 953, 1299
PspFI CCCAGC 1 cut(s) 153
PspN4I GGNNCC 2 cut(s) 1112, 1113
PspPI GGNCC 6 cut(s) 223, 273, 794, 909, 1111, 1132
PspPPI RGGWCCY 1 cut(s) 1111
PspXI VCTCGAGB 2 cut(s) 699, 737
PstNI CAGNNNCTG 2 cut(s) 480, 1170
PsuI RGATCY 1 cut(s) 622
PteI GCGCGC 1 cut(s) 1359
PvuII CAGCTG 1 cut(s) 88
RsaI GTAC 2 cut(s) 1081, 1128
RsaNI GTAC 2 cut(s) 1080, 1127
RseI CAYNNNNRTG 1 cut(s) 68
Rsr2I CGGWCCG 1 cut(s) 909
RsrII CGGWCCG 1 cut(s) 909
SapI GCTCTTC 2 cut(s) 813, 1432
SaqAI TTAA 3 cut(s) 282, 666, 1413
SatI GCNGC 5 cut(s) 38, 89, 362, 475, 1168
Sau3AI GATC 6 cut(s) 538, 571, 622, 832, 1275, 1351
Sau96I GGNCC 6 cut(s) 223, 273, 794, 909, 1111, 1132
SchI GAGTC 3 cut(s) 206, 749, 887
ScrFI CCNGG 1 cut(s) 594
SduI GDGCHC 2 cut(s) 60, 1284
SfaNI GCATC 1 cut(s) 114
Sfr274I CTCGAG 2 cut(s) 699, 737
SgrAI CRCCGGYG 1 cut(s) 357
SinI GGWCC 4 cut(s) 223, 273, 909, 1111
SlaI CTCGAG 2 cut(s) 699, 737
SmiMI CAYNNNNRTG 1 cut(s) 68
SmlI CTYRAG 3 cut(s) 699, 737, 965
SmoI CTYRAG 3 cut(s) 699, 737, 965
SphI GCATGC 1 cut(s) 1055
Sse9I AATT 9 cut(s) 19, 236, 279, 414, 438, 668, 780, 902, 1469
SsiI CCGC 5 cut(s) 175, 361, 846, 907, 1167
SspMI CTAG 1 cut(s) 1442
StyD4I CCNGG 1 cut(s) 592
StyI CCWWGG 1 cut(s) 532
TaaI ACNGT 6 cut(s) 143, 545, 980, 992, 1020, 1315
TaiI ACGT 8 cut(s) 30, 338, 619, 877, 955, 1301, 1388, 1464
TaqII GACCGA 1 cut(s) 885
TasI AATT 9 cut(s) 19, 236, 279, 414, 438, 668, 780, 902, 1469
TauI GCSGC 2 cut(s) 364, 1170
Tru1I TTAA 3 cut(s) 282, 666, 1413
Tru9I TTAA 3 cut(s) 282, 666, 1413
TscAI CASTG 3 cut(s) 548, 997, 1248
TseFI GTSAC 2 cut(s) 112, 545
TseI GCWGC 3 cut(s) 37, 88, 474
Tsp45I GTSAC 2 cut(s) 112, 545
TspDTI ATGAA 3 cut(s) 1304, 1419, 1431
TspGWI ACGGA 2 cut(s) 243, 901
TspRI CASTG 3 cut(s) 548, 997, 1248
VpaK11BI GGWCC 4 cut(s) 223, 273, 909, 1111
XapI RAATTY 5 cut(s) 19, 236, 438, 668, 780
XceI RCATGY 2 cut(s) 495, 1055
XcmI CCANNNNNNNNNTGG 2 cut(s) 76, 1215
XhoI CTCGAG 2 cut(s) 699, 737
XmiI GTMKAC 1 cut(s) 1310
XspI CTAG 1 cut(s) 1442
ZraI GACGTC 2 cut(s) 336, 617
Zsp2I ATGCAT 1 cut(s) 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.