Rw3G010950

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000638
Physical Location & Seq
Forward (+)
10528073 .. 10530010
1938 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G010950.1

Sequence Viewer

Length: 1446 bp
ATGGAGATGCAGATGGAGCTCCAGCCACAACCACACGTACTACTATTGCCCTTCCCAGCACAAGGCCACATCAAGCCCATGCTAGCCTTGGCGCAGCTTCTCTGCCACGCCGGCATCCACGTCACCTTCCTCAACACTGAGCATAACCACCGCCAGCTCACCCAACGCCAAGCCCTCTCCGCCCGATTCCCTACTCTCCACTTCCGCTCCATCTCCGACGGCCTCCCCTCCGATCATCCACGCTCCATTTCCCCTAATCTCATGGACATAGTCTCGTCCCTGAGGTCCAAAACGGCGCCGCTCCTGCATCAACTCCTGGTCTCCCTCATGAGCAAAAACGACGTCGGCTCTGCAGCTCAGCTGCCTTCTTTGGGCTGTGTGATAACAGACGGGATCATGTGTTTCGCAATTGAAGCGGCGGAGGAGGCCGGAATTCCCGTAATTGCCCTCCGCACCACCAGCGCTTGTAGCTTCTGGTGCTACTCATGCATCCCCAAGCTAATTGAAGAAGCTCAGTTGCCTTTTGGAGATGAAGATATGGATAAGATGGTGAGCGGCATTCCCGGGATGGAATGCCTTTTACGACGAAGAGACCTACCGAGTATTTGCAGAGTACCAACGGACCACCCGGTTATCCAGTTTTTCGTGGAAGAGACCAGAGCCATAACTCGAGCTTCTAGTCTCATACTCAACACCTTTGACGACCTCGAATCCTCAGTTCTCTCCCACATTGCCTCTCGATTTTCAAAAATTTACACCATCGGACCATTGCATGCTCTCCTCAAATCTCGTGTCGTGGACGACAACCTATCTTCCTCTTTGCGCCAAGAAGACCGTGGTTGCATGATGTGGTTGGACTCCCAAAGGGTTGGGTCTGTTATTTTCGTTAGCTTCGGGAGTCTGGTGAAACTAACACGTGTTCAATTACTAGAATTTTGGCACGGATTGGTTAATAGTGGGTCCCCTTTTCTATGGGTCATCCGCTCAGATGTGCTATGGAGTGATGAAGGAGAGCAAGCGAGTCACGTGACCTCGGCGGAGTTGGAGATAGGTACAAAAGAACGGGGGTTTATAGTGGATTGGGCTCCACAAGAAGAGGTCCTCGCCGATGAAGCTGTGGGTGGGTTTCTTACCCATAGCGGGTGGAATTCGACACTGGAGGCAATTTGGGCCGGAGTCCCAATGCTTTGCTGGCCCCAACTAGCAGACCAGCAGGTGAATAGTAGATGGGTTGGAGAGGTTTGGAAGATTGGGGTTGATATGAAAGACACGTGTGATAGATCGACGGTCGAGAAGATGATCAAAGCCTTGATGAAAGGTGAAGATAAAGAGGTGATTTCCAGGTCGGTGGATCATTTTGCAAAATTGGCGCGGACTTCTGTTAGTAAAAATGGCTCTTCATACCTTAATTTGGAGAAACTTATTCAAGACTTGAGAAATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

481

Amino Acids

53.59

Weight (kDa)

5.74

Isoelectric Point (pI)

50.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 70 1.3e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 273 - 444 3.5e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1204
AatII GACGTC 1 cut(s) 345
Acc36I ACCTGC 1 cut(s) 1204
AccB1I GGYRCC 1 cut(s) 295
AccBSI CCGCTC 4 cut(s) 207, 301, 555, 984
AccII CGCG 1 cut(s) 1372
AclWI GGATC 2 cut(s) 401, 1359
AcsI RAATTY 5 cut(s) 432, 750, 932, 1147, 1438
AcvI CACGTG 3 cut(s) 917, 1027, 1272
AcyI GRCGYC 2 cut(s) 296, 342
AfaI GTAC 3 cut(s) 39, 615, 1054
AfeI AGCGCT 1 cut(s) 463
AfiI CCNNNNNNNGG 4 cut(s) 62, 371, 1140, 1411
AflIII ACRYGT 5 cut(s) 34, 914, 916, 1269, 1271
AgsI TTSAA 5 cut(s) 413, 506, 747, 923, 1427
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 2 cut(s) 315, 1340
Alw21I GWGCWC 1 cut(s) 21
Alw26I GTCTC 5 cut(s) 277, 325, 585, 647, 686
AlwI GGATC 2 cut(s) 401, 1359
Ama87I CYCGRG 2 cut(s) 563, 669
Aor51HI AGCGCT 1 cut(s) 463
AoxI GGCC 5 cut(s) 64, 220, 426, 1170, 1193
ApeKI GCWGC 3 cut(s) 94, 353, 361
ApoI RAATTY 5 cut(s) 432, 750, 932, 1147, 1438
ArsI GACNNNNNNTTYG 4 cut(s) 327, 359, 777, 809
AspLEI GCGC 5 cut(s) 94, 298, 464, 825, 1372
AspS9I GGNCC 7 cut(s) 285, 622, 764, 960, 1099, 1170, 1194
AsuC2I CCSGG 3 cut(s) 564, 565, 629
AsuHPI GGTGA 7 cut(s) 115, 151, 562, 916, 1228, 1331, 1345
AsuNHI GCTAGC 1 cut(s) 82
AvaI CYCGRG 2 cut(s) 563, 669
AvaII GGWCC 5 cut(s) 285, 622, 764, 960, 1099
AxyI CCTNAGG 1 cut(s) 281
BanI GGYRCC 1 cut(s) 295
BanII GRGCYC 2 cut(s) 21, 1087
BauI CACGAG 1 cut(s) 789
BbrPI CACGTG 3 cut(s) 917, 1027, 1272
BbsI GAAGAC 1 cut(s) 837
Bbv12I GWGCWC 1 cut(s) 21
BbvI GCAGC 3 cut(s) 106, 348, 365
BccI CCATC 6 cut(s) 7, 218, 541, 562, 767, 1221
BceAI ACGGC 2 cut(s) 235, 309
BciT130I CCWGG 2 cut(s) 317, 1342
BclI TGATCA 1 cut(s) 1299
BcnI CCSGG 3 cut(s) 564, 565, 629
BcoDI GTCTC 5 cut(s) 277, 325, 585, 647, 686
BfaI CTAG 4 cut(s) 83, 678, 929, 1202
BfmI CTRYAG 1 cut(s) 351
BfoI RGCGCY 2 cut(s) 299, 465
BfuAI ACCTGC 1 cut(s) 1204
BglI GCCNNNNNGGC 1 cut(s) 111
BisI GCNGC 6 cut(s) 95, 299, 354, 362, 417, 556
BlpI GCTNAGC 1 cut(s) 357
BlsI GCNGC 6 cut(s) 96, 300, 355, 363, 418, 557
Bme1390I CCNGG 5 cut(s) 317, 564, 565, 629, 1342
Bme18I GGWCC 5 cut(s) 285, 622, 764, 960, 1099
BmeT110I CYCGRG 2 cut(s) 563, 669
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 7 cut(s) 285, 622, 764, 960, 1099, 1170, 1194
BmiI GGNNCC 5 cut(s) 297, 961, 962, 1086, 1196
BmrFI CCNGG 5 cut(s) 317, 564, 565, 629, 1342
BmsI GCATC 3 cut(s) 123, 316, 498
BmtI GCTAGC 1 cut(s) 86
BpiI GAAGAC 1 cut(s) 837
BpmI CTGGAG 2 cut(s) 5, 1178
Bpu1102I GCTNAGC 1 cut(s) 357
BpuMI CCSGG 3 cut(s) 564, 565, 629
BsaAI YACGTR 4 cut(s) 37, 917, 1027, 1272
BsaHI GRCGYC 2 cut(s) 296, 342
BsaI GGTCTC 3 cut(s) 325, 585, 647
BsaJI CCNNGG 4 cut(s) 87, 563, 835, 1032
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 371, 1140, 1411
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 2 cut(s) 637, 1161
Bse21I CCTNAGG 1 cut(s) 281
Bse3DI GCAATG 2 cut(s) 729, 767
BseBI CCWGG 2 cut(s) 317, 1342
BseDI CCNNGG 4 cut(s) 87, 563, 835, 1032
BseGI GGATG 5 cut(s) 114, 235, 489, 573, 978
BseLI CCNNNNNNNGG 4 cut(s) 62, 371, 1140, 1411
BseMI GCAATG 2 cut(s) 729, 767
BseMII CTCAG 6 cut(s) 129, 272, 371, 527, 729, 999
BseNI ACTGG 2 cut(s) 637, 1161
BseRI GAGGAG 2 cut(s) 437, 770
BseXI GCAGC 3 cut(s) 106, 348, 365
BseYI CCCAGC 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 1372
Bsh1285I CGRYCG 1 cut(s) 1290
BshFI GGCC 5 cut(s) 66, 222, 428, 1172, 1195
BshNI GGYRCC 1 cut(s) 295
BsiEI CGRYCG 1 cut(s) 1290
BsiHKAI GWGCWC 1 cut(s) 21
BsiHKCI CYCGRG 2 cut(s) 563, 669
BsiSI CCGG 5 cut(s) 111, 429, 564, 629, 1173
BslFI GGGAC 3 cut(s) 262, 946, 1163
BslI CCNNNNNNNGG 4 cut(s) 62, 371, 1140, 1411
BsmAI GTCTC 5 cut(s) 277, 325, 585, 647, 686
BsmFI GGGAC 3 cut(s) 262, 946, 1163
BsmI GAATGC 2 cut(s) 558, 578
BsnI GGCC 5 cut(s) 66, 222, 428, 1172, 1195
Bso31I GGTCTC 3 cut(s) 325, 585, 647
BsoBI CYCGRG 2 cut(s) 563, 669
Bsp1286I GDGCHC 2 cut(s) 21, 1087
Bsp143I GATC 5 cut(s) 232, 393, 1280, 1299, 1351
Bsp1720I GCTNAGC 1 cut(s) 357
BspANI GGCC 5 cut(s) 66, 222, 428, 1172, 1195
BspCNI CTCAG 6 cut(s) 130, 273, 370, 526, 728, 998
BspFNI CGCG 1 cut(s) 1372
BspHI TCATGA 1 cut(s) 327
BspLI GGNNCC 5 cut(s) 297, 961, 962, 1086, 1196
BspMAI CTGCAG 1 cut(s) 355
BspMI ACCTGC 1 cut(s) 1204
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 2 cut(s) 401, 1359
BspQI GCTCTTC 1 cut(s) 1402
BspT107I GGYRCC 1 cut(s) 295
BspTNI GGTCTC 3 cut(s) 325, 585, 647
BsrBI CCGCTC 4 cut(s) 207, 301, 555, 984
BsrDI GCAATG 2 cut(s) 729, 767
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 2 cut(s) 637, 1161
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 4 cut(s) 87, 563, 835, 1032
BssMI GATC 5 cut(s) 232, 393, 1280, 1299, 1351
BssNI GRCGYC 2 cut(s) 296, 342
BssSI CACGAG 1 cut(s) 789
BssT1I CCWWGG 1 cut(s) 87
Bst2BI CACGAG 1 cut(s) 789
Bst2UI CCWGG 2 cut(s) 317, 1342
Bst4CI ACNGT 2 cut(s) 836, 1288
Bst6I CTCTTC 4 cut(s) 583, 645, 1089, 1402
BstACI GRCGYC 2 cut(s) 296, 342
BstBAI YACGTR 4 cut(s) 37, 917, 1027, 1272
BstC8I GCNNGC 6 cut(s) 84, 112, 155, 774, 1017, 1193
BstDEI CTNAG 6 cut(s) 138, 281, 357, 513, 715, 985
BstDSI CCRYGG 1 cut(s) 835
BstF5I GGATG 5 cut(s) 114, 235, 489, 573, 978
BstFNI CGCG 1 cut(s) 1372
BstH2I RGCGCY 2 cut(s) 299, 465
BstHHI GCGC 5 cut(s) 94, 298, 464, 825, 1372
BstKTI GATC 5 cut(s) 235, 396, 1283, 1302, 1354
BstMAI GTCTC 5 cut(s) 277, 325, 585, 647, 686
BstMBI GATC 5 cut(s) 232, 393, 1280, 1299, 1351
BstMCI CGRYCG 1 cut(s) 1290
BstNI CCWGG 2 cut(s) 317, 1342
BstNSI RCATGY 1 cut(s) 776
BstSCI CCNGG 5 cut(s) 315, 562, 563, 627, 1340
BstSFI CTRYAG 1 cut(s) 351
BstUI CGCG 1 cut(s) 1372
BstV1I GCAGC 3 cut(s) 106, 348, 365
BstV2I GAAGAC 1 cut(s) 837
BstXI CCANNNNNNTGG 2 cut(s) 869, 1348
Bsu36I CCTNAGG 1 cut(s) 281
BsuRI GGCC 5 cut(s) 66, 222, 428, 1172, 1195
BtgI CCRYGG 1 cut(s) 835
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 5 cut(s) 114, 235, 489, 573, 978
BtsIMutI CAGTG 2 cut(s) 135, 1154
BveI ACCTGC 1 cut(s) 1204
Cac8I GCNNGC 6 cut(s) 84, 112, 155, 774, 1017, 1193
CciI TCATGA 1 cut(s) 327
CfoI GCGC 5 cut(s) 94, 298, 464, 825, 1372
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 7 cut(s) 285, 622, 764, 960, 1099, 1170, 1194
Cfr9I CCCGGG 1 cut(s) 563
Csp6I GTAC 3 cut(s) 38, 614, 1053
CviAII CATG 7 cut(s) 79, 262, 328, 397, 486, 773, 844
CviQI GTAC 3 cut(s) 38, 614, 1053
DdeI CTNAG 6 cut(s) 138, 281, 357, 513, 715, 985
DinI GGCGCC 1 cut(s) 297
DpnI GATC 5 cut(s) 234, 395, 1282, 1301, 1353
DpnII GATC 5 cut(s) 232, 393, 1280, 1299, 1351
Eam1104I CTCTTC 4 cut(s) 583, 645, 1089, 1402
EarI CTCTTC 4 cut(s) 583, 645, 1089, 1402
EciI GGCGGA 3 cut(s) 169, 434, 1052
Ecl136II GAGCTC 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 87
Eco24I GRGCYC 2 cut(s) 21, 1087
Eco31I GGTCTC 3 cut(s) 325, 585, 647
Eco47I GGWCC 5 cut(s) 285, 622, 764, 960, 1099
Eco47III AGCGCT 1 cut(s) 463
Eco53kI GAGCTC 1 cut(s) 19
Eco72I CACGTG 3 cut(s) 917, 1027, 1272
Eco81I CCTNAGG 1 cut(s) 281
Eco88I CYCGRG 2 cut(s) 563, 669
EcoICRI GAGCTC 1 cut(s) 19
EcoO109I RGGNCCY 2 cut(s) 960, 1099
EcoRI GAATTC 2 cut(s) 432, 1147
EcoRII CCWGG 2 cut(s) 315, 1340
EcoT14I CCWWGG 1 cut(s) 87
EcoT22I ATGCAT 1 cut(s) 491
EcoT38I GRGCYC 2 cut(s) 21, 1087
EgeI GGCGCC 1 cut(s) 297
EheI GGCGCC 1 cut(s) 297
ErhI CCWWGG 1 cut(s) 87
FaeI CATG 7 cut(s) 82, 265, 331, 400, 489, 776, 847
FaqI GGGAC 3 cut(s) 262, 946, 1163
FatI CATG 7 cut(s) 78, 261, 327, 396, 485, 772, 843
FauI CCCGC 1 cut(s) 1133
FbaI TGATCA 1 cut(s) 1299
Fnu4HI GCNGC 6 cut(s) 95, 299, 354, 362, 417, 556
FokI GGATG 5 cut(s) 101, 222, 476, 580, 965
FriOI GRGCYC 2 cut(s) 21, 1087
Fsp4HI GCNGC 6 cut(s) 95, 299, 354, 362, 417, 556
FspBI CTAG 4 cut(s) 83, 678, 929, 1202
GlaI GCGC 5 cut(s) 93, 297, 463, 824, 1371
GluI GCNGC 6 cut(s) 95, 299, 354, 362, 417, 556
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 2 cut(s) 5, 1178
HaeII RGCGCY 2 cut(s) 299, 465
HaeIII GGCC 5 cut(s) 66, 222, 428, 1172, 1195
HapII CCGG 5 cut(s) 111, 429, 564, 629, 1173
HhaI GCGC 5 cut(s) 94, 298, 464, 825, 1372
Hin1I GRCGYC 2 cut(s) 296, 342
Hin1II CATG 7 cut(s) 82, 265, 331, 400, 489, 776, 847
Hin6I GCGC 5 cut(s) 92, 296, 462, 823, 1370
HinP1I GCGC 5 cut(s) 92, 296, 462, 823, 1370
HinfI GANTC 6 cut(s) 186, 710, 857, 898, 1021, 1176
HpaII CCGG 5 cut(s) 111, 429, 564, 629, 1173
HphI GGTGA 7 cut(s) 115, 151, 562, 916, 1228, 1331, 1345
Hpy166II GTNNAC 1 cut(s) 799
Hpy188I TCNGA 4 cut(s) 217, 232, 764, 988
Hpy188III TCNNGA 5 cut(s) 328, 738, 895, 1291, 1427
Hpy8I GTNNAC 1 cut(s) 799
Hpy99I CGWCG 5 cut(s) 221, 344, 347, 588, 1288
HpyAV CCTTC 4 cut(s) 61, 136, 375, 1001
HpyCH4III ACNGT 2 cut(s) 836, 1288
HpyCH4IV ACGT 6 cut(s) 36, 120, 342, 916, 1026, 1271
HpyCH4V TGCA 8 cut(s) 10, 307, 353, 489, 609, 772, 843, 1361
HpyF3I CTNAG 6 cut(s) 138, 281, 357, 513, 715, 985
HpySE526I ACGT 6 cut(s) 36, 120, 342, 916, 1026, 1271
Hsp92I GRCGYC 2 cut(s) 296, 342
Hsp92II CATG 7 cut(s) 82, 265, 331, 400, 489, 776, 847
HspAI GCGC 5 cut(s) 92, 296, 462, 823, 1370
KasI GGCGCC 1 cut(s) 295
KflI GGGWCCC 1 cut(s) 960
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 1299
Kzo9I GATC 5 cut(s) 232, 393, 1280, 1299, 1351
LguI GCTCTTC 1 cut(s) 1402
LmnI GCTCC 6 cut(s) 16, 24, 212, 248, 306, 1090
Lsp1109I GCAGC 3 cut(s) 106, 348, 365
LweI GCATC 3 cut(s) 123, 316, 498
MaeI CTAG 4 cut(s) 83, 678, 929, 1202
MaeII ACGT 6 cut(s) 36, 120, 342, 916, 1026, 1271
MaeIII GTNAC 3 cut(s) 121, 1022, 1027
MalI GATC 5 cut(s) 234, 395, 1282, 1301, 1353
MbiI CCGCTC 4 cut(s) 207, 301, 555, 984
MboI GATC 5 cut(s) 232, 393, 1280, 1299, 1351
MfeI CAATTG 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 21, 1087
Mly113I GGCGCC 1 cut(s) 296
MlyI GAGTC 4 cut(s) 851, 907, 1030, 1185
MmeI TCCRAC 4 cut(s) 240, 834, 1023, 1213
Mph1103I ATGCAT 1 cut(s) 491
MroNI GCCGGC 1 cut(s) 110
MseI TTAA 2 cut(s) 951, 1407
MspA1I CMGCKG 1 cut(s) 361
MspI CCGG 5 cut(s) 111, 429, 564, 629, 1173
MspR9I CCNGG 5 cut(s) 317, 564, 565, 629, 1342
MunI CAATTG 1 cut(s) 408
Mva1269I GAATGC 2 cut(s) 558, 578
MvaI CCWGG 2 cut(s) 317, 1342
MvnI CGCG 1 cut(s) 1372
NaeI GCCGGC 1 cut(s) 112
NarI GGCGCC 1 cut(s) 296
NciI CCSGG 3 cut(s) 564, 565, 629
NdeII GATC 5 cut(s) 232, 393, 1280, 1299, 1351
NgoMIV GCCGGC 1 cut(s) 110
NheI GCTAGC 1 cut(s) 82
NlaIII CATG 7 cut(s) 82, 265, 331, 400, 489, 776, 847
NlaIV GGNNCC 5 cut(s) 297, 961, 962, 1086, 1196
NmeAIII GCCGAG 1 cut(s) 1013
NmuCI GTSAC 3 cut(s) 121, 1022, 1027
NsiI ATGCAT 1 cut(s) 491
NspI RCATGY 1 cut(s) 776
PaeI GCATGC 1 cut(s) 776
PaeR7I CTCGAG 1 cut(s) 669
PagI TCATGA 1 cut(s) 327
PaqCI CACCTGC 1 cut(s) 1204
PciSI GCTCTTC 1 cut(s) 1402
PctI GAATGC 2 cut(s) 558, 578
PdiI GCCGGC 1 cut(s) 112
PfeI GAWTC 2 cut(s) 186, 710
PflFI GACNNNGTC 1 cut(s) 269
PkrI GCNGC 6 cut(s) 96, 300, 355, 363, 418, 557
PleI GAGTC 4 cut(s) 851, 906, 1029, 1184
PluTI GGCGCC 1 cut(s) 299
PmaCI CACGTG 3 cut(s) 917, 1027, 1272
PmlI CACGTG 3 cut(s) 917, 1027, 1272
PpsI GAGTC 4 cut(s) 851, 906, 1029, 1184
Ppu21I YACGTR 4 cut(s) 37, 917, 1027, 1272
PpuMI RGGWCCY 2 cut(s) 960, 1099
Psp124BI GAGCTC 1 cut(s) 21
Psp5II RGGWCCY 2 cut(s) 960, 1099
Psp6I CCWGG 2 cut(s) 315, 1340
PspCI CACGTG 3 cut(s) 917, 1027, 1272
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 2 cut(s) 315, 1340
PspN4I GGNNCC 5 cut(s) 297, 961, 962, 1086, 1196
PspPI GGNCC 7 cut(s) 285, 622, 764, 960, 1099, 1170, 1194
PspPPI RGGWCCY 2 cut(s) 960, 1099
PspXI VCTCGAGB 1 cut(s) 669
PstI CTGCAG 1 cut(s) 355
PsyI GACNNNGTC 1 cut(s) 269
PvuII CAGCTG 1 cut(s) 361
RsaI GTAC 3 cut(s) 39, 615, 1054
RsaNI GTAC 3 cut(s) 38, 614, 1053
SacI GAGCTC 1 cut(s) 21
SapI GCTCTTC 1 cut(s) 1402
SaqAI TTAA 2 cut(s) 951, 1407
SatI GCNGC 6 cut(s) 95, 299, 354, 362, 417, 556
Sau3AI GATC 5 cut(s) 232, 393, 1280, 1299, 1351
Sau96I GGNCC 7 cut(s) 285, 622, 764, 960, 1099, 1170, 1194
SchI GAGTC 4 cut(s) 851, 907, 1030, 1185
ScrFI CCNGG 5 cut(s) 317, 564, 565, 629, 1342
SduI GDGCHC 2 cut(s) 21, 1087
SfaNI GCATC 3 cut(s) 123, 316, 498
SfcI CTRYAG 1 cut(s) 351
SfoI GGCGCC 1 cut(s) 297
Sfr274I CTCGAG 1 cut(s) 669
SinI GGWCC 5 cut(s) 285, 622, 764, 960, 1099
SlaI CTCGAG 1 cut(s) 669
SmaI CCCGGG 1 cut(s) 565
SmlI CTYRAG 2 cut(s) 669, 1432
SmoI CTYRAG 2 cut(s) 669, 1432
SphI GCATGC 1 cut(s) 776
SspDI GGCGCC 1 cut(s) 295
SspMI CTAG 4 cut(s) 83, 678, 929, 1202
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 5 cut(s) 315, 562, 563, 627, 1340
StyI CCWWGG 1 cut(s) 87
TaaI ACNGT 2 cut(s) 836, 1288
TaiI ACGT 6 cut(s) 39, 123, 345, 919, 1029, 1274
TaqI TCGA 6 cut(s) 670, 708, 739, 1151, 1283, 1290
TauI GCSGC 3 cut(s) 301, 419, 558
TfiI GAWTC 2 cut(s) 186, 710
Tru1I TTAA 2 cut(s) 951, 1407
Tru9I TTAA 2 cut(s) 951, 1407
TscAI CASTG 2 cut(s) 142, 1161
TseFI GTSAC 3 cut(s) 121, 1022, 1027
TseI GCWGC 3 cut(s) 94, 353, 361
Tsp45I GTSAC 3 cut(s) 121, 1022, 1027
TspDTI ATGAA 6 cut(s) 546, 1020, 1125, 1277, 1328, 1389
TspGWI ACGGA 2 cut(s) 635, 957
TspMI CCCGGG 1 cut(s) 563
TspRI CASTG 2 cut(s) 142, 1161
Tth111I GACNNNGTC 1 cut(s) 269
VpaK11BI GGWCC 5 cut(s) 285, 622, 764, 960, 1099
XapI RAATTY 5 cut(s) 432, 750, 932, 1147, 1438
XceI RCATGY 1 cut(s) 776
XcmI CCANNNNNNNNNTGG 3 cut(s) 85, 833, 1188
XhoI CTCGAG 1 cut(s) 669
XmaI CCCGGG 1 cut(s) 563
XspI CTAG 4 cut(s) 83, 678, 929, 1202
ZraI GACGTC 1 cut(s) 343
Zsp2I ATGCAT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.