Rh3BG133600

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000638
Physical Location & Seq
Forward (+)
11263892 .. 11278407
14516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG133600.1

Sequence Viewer

Length: 1551 bp
ATGGAGATGCAGATGGAGCTCCGGCCACAACCACACGTACTACTATTGCCCTTCCCAGCACAAGGCCACATCAAGCCCATGCTAGCCTTGGCGCAGCTTCTCTGCCACGCCGGCATCCACGTCACCTTCCTCAACACCGAGCATAACCACCGCCAGCTCACCCAACGCCAAGCCCTCTCCGCCCGATTCCCTACTCTCCACTTCCGCTCCATCTCCGACGGCCTCCCCTCCGATCATCCACGCTCCATTTCCCCTAATCTCATGGACATAGTCTCGTCCCTGAGGTCCAAAACGGCGCCACTCCTGCATCAACTCCTGGTCTCCCTCACAAGCAAAATCGACGTCGGCTCTGCAGCTCAGCTGCCTCCTTTGGGCTGTGTGATAACAGACTGGCTCATGTGTTTCGCAATTGAAGCGGCGGAGGAGGTCGGGATTCCCGTGATTGCCTTCCGCACCACCAGCGCTTGCAGCTTCTGGTGTGACTCATGCATCCCCAAGCTAATTGAAGAAGCTCAGCTGCCTTTTGGAGATGAAGATATGGATATGACGGTGAGAGGCATTCTTGGGATGGAATGCCTTTTACGACGAAGGGACCTACCGAGTACTTGCAGATTACCAATCGAGCACCCGGTTATGCAGTTTTACATGGAAGAGGCCAGATCCATAACTCGAGCTTCCAGTCTCATTATTAACACCTTCGACGACCTCGAGTCCTCAGTTCTCTCCCACATTGCCTCTCGATTTTCAAATATTTACACCGTCGGACCATTGCATGCTCTCCTCAAATCCCGTTTCGTGGACGACAACCCATCTTCCTCATCCTCCGCCGCCGCCTCTTTGCGCCAAGAAGACCGTCGTTGCATGATGTGGCTGGACTCCCAAAGGGTTGGGTCTGTAATTTTCGTGAGCTTCGGAAGTGTAGTGAAACTAACACGTGTTCAATTACTAGAGTTTTGGCACGGATTGGTTAATAGTGGGTCCCCTTTTCTATGGGTCATCCGCTCAGATTTGCTACGGAGTAGCGCAGCAGAGCACGCAAGTCACCTGACCCCGGCAGAGTTGGAGATAGGTACAAAAGAACGGGGGTTTATAGTGGATTGGGCCCCGCAAGAAGAGGTCCTGGCCCATGAAACTGTGGTTGGGTTTTTGACCCATAGCGGGTGGAATTCAACACTGGAGGCAATTTGGGCCGGAGTCCCAATGCTTTGCTGGCCCCAACTAGCCGACCAACAGGTGAATAGTAGATGGGTTGGAGAGGTTTGGAAGATTGGGGTTGACATGAAGGACACATGTGATAGATCGACGATCGAGAAGATGATCAAAACCTTAATGGAAGGTAAAGAAAGAGATATGATTTCAAGGTCGGTTGATCAATTTGCAAAACTGGCGCAAACTTCTGTGAGTGAAAGTGGCTCTTCATATCATAACCTAGAGAAACTTATTCAATACTTGAGAGAAATTTATGATTTGATTTGTATAAGATTCACAGTTTCATACTTGTATATGCAAGAAGTTCAGTTAGGACTTCACAATCATGTCCTACTCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

516

Amino Acids

58.05

Weight (kDa)

5.92

Isoelectric Point (pI)

57.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 76 5.6e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 286 - 447 7.6e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 345
AccB1I GGYRCC 1 cut(s) 295
AccBSI CCGCTC 2 cut(s) 207, 1002
AclWI GGATC 1 cut(s) 654
AcoI YGGCCR 1 cut(s) 23
AcsI RAATTY 2 cut(s) 1165, 1458
AcvI CACGTG 1 cut(s) 935
AcyI GRCGYC 2 cut(s) 296, 342
AfaI GTAC 3 cut(s) 39, 604, 1072
AfeI AGCGCT 1 cut(s) 463
AfiI CCNNNNNNNGG 5 cut(s) 62, 371, 796, 1051, 1158
AflIII ACRYGT 4 cut(s) 34, 932, 934, 1289
AgsI TTSAA 7 cut(s) 413, 506, 747, 941, 1170, 1359, 1445
AhdI GACNNNNNGTC 1 cut(s) 709
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 2 cut(s) 315, 1119
AjuI GAANNNNNNNTTGG 2 cut(s) 1122, 1154
Alw21I GWGCWC 3 cut(s) 21, 627, 1035
Alw26I GTCTC 3 cut(s) 277, 325, 686
AlwI GGATC 1 cut(s) 654
AlwNI CAGNNNCTG 1 cut(s) 474
Ama87I CYCGRG 2 cut(s) 669, 707
Aor51HI AGCGCT 1 cut(s) 463
AoxI GGCC 8 cut(s) 23, 64, 220, 654, 1101, 1122, 1188, 1211
ApaI GGGCCC 1 cut(s) 1105
ApeKI GCWGC 6 cut(s) 94, 353, 361, 468, 517, 1025
ApoI RAATTY 2 cut(s) 1165, 1458
ArsI GACNNNNNNTTYG 2 cut(s) 327, 359
AspLEI GCGC 6 cut(s) 94, 298, 464, 843, 1025, 1390
AsuC2I CCSGG 2 cut(s) 629, 1052
AsuHPI GGTGA 5 cut(s) 115, 151, 562, 1034, 1246
AsuNHI GCTAGC 1 cut(s) 82
AvaI CYCGRG 2 cut(s) 669, 707
AvaII GGWCC 5 cut(s) 285, 592, 764, 978, 1117
AxyI CCTNAGG 1 cut(s) 281
BaeGI GKGCMC 1 cut(s) 1105
BanI GGYRCC 1 cut(s) 295
BanII GRGCYC 2 cut(s) 21, 1105
BbrPI CACGTG 1 cut(s) 935
BbsI GAAGAC 1 cut(s) 855
Bbv12I GWGCWC 3 cut(s) 21, 627, 1035
BbvI GCAGC 6 cut(s) 106, 348, 365, 480, 504, 1037
BccI CCATC 5 cut(s) 7, 218, 562, 817, 1239
BceAI ACGGC 2 cut(s) 235, 309
BciT130I CCWGG 2 cut(s) 317, 1121
BclI TGATCA 2 cut(s) 1317, 1369
BcnI CCSGG 2 cut(s) 629, 1052
BcoDI GTCTC 3 cut(s) 277, 325, 686
BfaI CTAG 4 cut(s) 83, 947, 1220, 1430
BfmI CTRYAG 1 cut(s) 351
BfoI RGCGCY 2 cut(s) 299, 465
BglI GCCNNNNNGGC 1 cut(s) 111
BisI GCNGC 9 cut(s) 95, 354, 362, 417, 469, 518, 828, 831, 1026
BlpI GCTNAGC 2 cut(s) 357, 513
BlsI GCNGC 9 cut(s) 96, 355, 363, 418, 470, 519, 829, 832, 1027
BmcAI AGTACT 1 cut(s) 604
Bme1390I CCNGG 4 cut(s) 317, 629, 1052, 1121
Bme18I GGWCC 5 cut(s) 285, 592, 764, 978, 1117
BmeRI GACNNNNNGTC 1 cut(s) 709
BmeT110I CYCGRG 2 cut(s) 669, 707
BmgBI CACGTC 1 cut(s) 121
BmiI GGNNCC 7 cut(s) 297, 593, 979, 980, 1103, 1104, 1214
BmrFI CCNGG 4 cut(s) 317, 629, 1052, 1121
BmsI GCATC 3 cut(s) 123, 316, 498
BmtI GCTAGC 1 cut(s) 86
BpiI GAAGAC 1 cut(s) 855
BpmI CTGGAG 1 cut(s) 1196
Bpu1102I GCTNAGC 2 cut(s) 357, 513
BpuEI CTTGAG 1 cut(s) 1471
BpuMI CCSGG 2 cut(s) 629, 1052
BsaAI YACGTR 2 cut(s) 37, 935
BsaHI GRCGYC 2 cut(s) 296, 342
BsaI GGTCTC 1 cut(s) 325
BsaJI CCNNGG 2 cut(s) 87, 1050
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 371, 796, 1051, 1158
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 4 cut(s) 395, 678, 1179, 1389
Bse21I CCTNAGG 1 cut(s) 281
Bse3DI GCAATG 2 cut(s) 729, 767
BseBI CCWGG 2 cut(s) 317, 1121
BseDI CCNNGG 2 cut(s) 87, 1050
BseGI GGATG 6 cut(s) 114, 235, 489, 573, 818, 996
BseLI CCNNNNNNNGG 5 cut(s) 62, 371, 796, 1051, 1158
BseMI GCAATG 2 cut(s) 729, 767
BseMII CTCAG 5 cut(s) 272, 371, 527, 729, 1017
BseNI ACTGG 4 cut(s) 395, 678, 1179, 1389
BseRI GAGGAG 2 cut(s) 437, 770
BseSI GKGCMC 1 cut(s) 1105
BseXI GCAGC 6 cut(s) 106, 348, 365, 480, 504, 1037
BseYI CCCAGC 1 cut(s) 55
Bsh1285I CGRYCG 1 cut(s) 1308
BshFI GGCC 8 cut(s) 25, 66, 222, 656, 1103, 1124, 1190, 1213
BshNI GGYRCC 1 cut(s) 295
BsiEI CGRYCG 1 cut(s) 1308
BsiHKAI GWGCWC 3 cut(s) 21, 627, 1035
BsiHKCI CYCGRG 2 cut(s) 669, 707
BsiSI CCGG 5 cut(s) 22, 111, 629, 1052, 1191
BslFI GGGAC 4 cut(s) 262, 605, 964, 1181
BslI CCNNNNNNNGG 5 cut(s) 62, 371, 796, 1051, 1158
BsmAI GTCTC 3 cut(s) 277, 325, 686
BsmFI GGGAC 4 cut(s) 262, 605, 964, 1181
BsmI GAATGC 2 cut(s) 558, 578
BsnI GGCC 8 cut(s) 25, 66, 222, 656, 1103, 1124, 1190, 1213
Bso31I GGTCTC 1 cut(s) 325
BsoBI CYCGRG 2 cut(s) 669, 707
Bsp120I GGGCCC 1 cut(s) 1101
Bsp1286I GDGCHC 4 cut(s) 21, 627, 1035, 1105
Bsp143I GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
Bsp1720I GCTNAGC 2 cut(s) 357, 513
BspANI GGCC 8 cut(s) 25, 66, 222, 656, 1103, 1124, 1190, 1213
BspCNI CTCAG 5 cut(s) 273, 370, 526, 728, 1016
BspLI GGNNCC 7 cut(s) 297, 593, 979, 980, 1103, 1104, 1214
BspMAI CTGCAG 1 cut(s) 355
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 1 cut(s) 654
BspQI GCTCTTC 1 cut(s) 1420
BspT107I GGYRCC 1 cut(s) 295
BspTNI GGTCTC 1 cut(s) 325
BsrBI CCGCTC 2 cut(s) 207, 1002
BsrDI GCAATG 2 cut(s) 729, 767
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 4 cut(s) 395, 678, 1179, 1389
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 2 cut(s) 87, 1050
BssMI GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
BssNI GRCGYC 2 cut(s) 296, 342
BssT1I CCWWGG 1 cut(s) 87
Bst2UI CCWGG 2 cut(s) 317, 1121
Bst4CI ACNGT 5 cut(s) 550, 760, 854, 1135, 1489
Bst6I CTCTTC 3 cut(s) 645, 1107, 1420
BstACI GRCGYC 2 cut(s) 296, 342
BstBAI YACGTR 2 cut(s) 37, 935
BstC8I GCNNGC 7 cut(s) 84, 112, 155, 466, 774, 1035, 1211
BstDEI CTNAG 5 cut(s) 281, 357, 513, 715, 1003
BstF5I GGATG 6 cut(s) 114, 235, 489, 573, 818, 996
BstH2I RGCGCY 2 cut(s) 299, 465
BstHHI GCGC 6 cut(s) 94, 298, 464, 843, 1025, 1390
BstKTI GATC 6 cut(s) 235, 662, 1301, 1308, 1320, 1372
BstMAI GTCTC 3 cut(s) 277, 325, 686
BstMBI GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
BstMCI CGRYCG 1 cut(s) 1308
BstNI CCWGG 2 cut(s) 317, 1121
BstNSI RCATGY 2 cut(s) 776, 1293
BstSCI CCNGG 4 cut(s) 315, 627, 1050, 1119
BstSFI CTRYAG 1 cut(s) 351
BstSLI GKGCMC 1 cut(s) 1105
BstV1I GCAGC 6 cut(s) 106, 348, 365, 480, 504, 1037
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 1 cut(s) 659
BstXI CCANNNNNNTGG 1 cut(s) 887
BstYI RGATCY 1 cut(s) 659
Bsu36I CCTNAGG 1 cut(s) 281
BsuRI GGCC 8 cut(s) 25, 66, 222, 656, 1103, 1124, 1190, 1213
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 6 cut(s) 114, 235, 489, 573, 818, 996
BtsIMutI CAGTG 1 cut(s) 1172
Cac8I GCNNGC 7 cut(s) 84, 112, 155, 466, 774, 1035, 1211
CaiI CAGNNNCTG 1 cut(s) 474
CfoI GCGC 6 cut(s) 94, 298, 464, 843, 1025, 1390
Cfr10I RCCGGY 1 cut(s) 110
Csp6I GTAC 3 cut(s) 38, 603, 1071
CviQI GTAC 3 cut(s) 38, 603, 1071
DdeI CTNAG 5 cut(s) 281, 357, 513, 715, 1003
DinI GGCGCC 1 cut(s) 297
DpnI GATC 6 cut(s) 234, 661, 1300, 1307, 1319, 1371
DpnII GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
DriI GACNNNNNGTC 1 cut(s) 709
EaeI YGGCCR 1 cut(s) 23
Eam1104I CTCTTC 3 cut(s) 645, 1107, 1420
Eam1105I GACNNNNNGTC 1 cut(s) 709
EarI CTCTTC 3 cut(s) 645, 1107, 1420
EciI GGCGGA 3 cut(s) 169, 434, 814
Ecl136II GAGCTC 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 87
Eco24I GRGCYC 2 cut(s) 21, 1105
Eco31I GGTCTC 1 cut(s) 325
Eco47I GGWCC 5 cut(s) 285, 592, 764, 978, 1117
Eco47III AGCGCT 1 cut(s) 463
Eco53kI GAGCTC 1 cut(s) 19
Eco72I CACGTG 1 cut(s) 935
Eco81I CCTNAGG 1 cut(s) 281
Eco88I CYCGRG 2 cut(s) 669, 707
EcoICRI GAGCTC 1 cut(s) 19
EcoO109I RGGNCCY 4 cut(s) 592, 978, 1102, 1117
EcoRI GAATTC 1 cut(s) 1165
EcoRII CCWGG 2 cut(s) 315, 1119
EcoT14I CCWWGG 1 cut(s) 87
EcoT22I ATGCAT 1 cut(s) 491
EcoT38I GRGCYC 2 cut(s) 21, 1105
EgeI GGCGCC 1 cut(s) 297
EheI GGCGCC 1 cut(s) 297
ErhI CCWWGG 1 cut(s) 87
FalI AAGNNNNNCTT 2 cut(s) 1399, 1431
FaqI GGGAC 4 cut(s) 262, 605, 964, 1181
FauI CCCGC 2 cut(s) 1113, 1151
FbaI TGATCA 2 cut(s) 1317, 1369
Fnu4HI GCNGC 9 cut(s) 95, 354, 362, 417, 469, 518, 828, 831, 1026
FokI GGATG 6 cut(s) 101, 222, 476, 580, 805, 983
FriOI GRGCYC 2 cut(s) 21, 1105
Fsp4HI GCNGC 9 cut(s) 95, 354, 362, 417, 469, 518, 828, 831, 1026
FspBI CTAG 4 cut(s) 83, 947, 1220, 1430
GlaI GCGC 6 cut(s) 93, 297, 463, 842, 1024, 1389
GluI GCNGC 9 cut(s) 95, 354, 362, 417, 469, 518, 828, 831, 1026
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 1 cut(s) 1196
HaeII RGCGCY 2 cut(s) 299, 465
HaeIII GGCC 8 cut(s) 25, 66, 222, 656, 1103, 1124, 1190, 1213
HapII CCGG 5 cut(s) 22, 111, 629, 1052, 1191
HhaI GCGC 6 cut(s) 94, 298, 464, 843, 1025, 1390
Hin1I GRCGYC 2 cut(s) 296, 342
Hin6I GCGC 6 cut(s) 92, 296, 462, 841, 1023, 1388
HinP1I GCGC 6 cut(s) 92, 296, 462, 841, 1023, 1388
HincII GTYRAC 1 cut(s) 1276
HindII GTYRAC 1 cut(s) 1276
HinfI GANTC 7 cut(s) 186, 433, 482, 710, 875, 1194, 1482
HpaII CCGG 5 cut(s) 22, 111, 629, 1052, 1191
HphI GGTGA 5 cut(s) 115, 151, 562, 1034, 1246
Hpy166II GTNNAC 2 cut(s) 799, 1276
Hpy188I TCNGA 5 cut(s) 217, 232, 764, 914, 1006
Hpy188III TCNNGA 4 cut(s) 430, 738, 904, 1309
Hpy8I GTNNAC 2 cut(s) 799, 1276
Hpy99I CGWCG 8 cut(s) 221, 344, 347, 588, 704, 764, 858, 1306
HpyAV CCTTC 7 cut(s) 61, 136, 457, 582, 706, 1276, 1328
HpyCH4III ACNGT 5 cut(s) 550, 760, 854, 1135, 1489
HpyCH4IV ACGT 4 cut(s) 36, 120, 342, 934
HpyF3I CTNAG 5 cut(s) 281, 357, 513, 715, 1003
HpySE526I ACGT 4 cut(s) 36, 120, 342, 934
Hsp92I GRCGYC 2 cut(s) 296, 342
HspAI GCGC 6 cut(s) 92, 296, 462, 841, 1023, 1388
KasI GGCGCC 1 cut(s) 295
KflI GGGWCCC 1 cut(s) 978
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Ksp22I TGATCA 2 cut(s) 1317, 1369
Kzo9I GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
LguI GCTCTTC 1 cut(s) 1420
LmnI GCTCC 4 cut(s) 16, 24, 212, 248
Lsp1109I GCAGC 6 cut(s) 106, 348, 365, 480, 504, 1037
LweI GCATC 3 cut(s) 123, 316, 498
MaeI CTAG 4 cut(s) 83, 947, 1220, 1430
MaeII ACGT 4 cut(s) 36, 120, 342, 934
MaeIII GTNAC 3 cut(s) 121, 479, 1040
MalI GATC 6 cut(s) 234, 661, 1300, 1307, 1319, 1371
MbiI CCGCTC 2 cut(s) 207, 1002
MboI GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
MboII GAAGA 9 cut(s) 518, 545, 662, 804, 860, 1124, 1276, 1324, 1407
MfeI CAATTG 1 cut(s) 408
MflI RGATCY 1 cut(s) 659
MhlI GDGCHC 4 cut(s) 21, 627, 1035, 1105
MluCI AATT 8 cut(s) 408, 501, 897, 941, 1165, 1182, 1373, 1458
Mly113I GGCGCC 1 cut(s) 296
MlyI GAGTC 4 cut(s) 476, 719, 869, 1203
MmeI TCCRAC 4 cut(s) 240, 742, 1041, 1231
Mph1103I ATGCAT 1 cut(s) 491
MroNI GCCGGC 1 cut(s) 110
MseI TTAA 3 cut(s) 690, 969, 1328
MslI CAYNNNNRTG 1 cut(s) 1533
MspA1I CMGCKG 2 cut(s) 361, 517
MspI CCGG 5 cut(s) 22, 111, 629, 1052, 1191
MspR9I CCNGG 4 cut(s) 317, 629, 1052, 1121
MunI CAATTG 1 cut(s) 408
Mva1269I GAATGC 2 cut(s) 558, 578
MvaI CCWGG 2 cut(s) 317, 1121
NaeI GCCGGC 1 cut(s) 112
NarI GGCGCC 1 cut(s) 296
NciI CCSGG 2 cut(s) 629, 1052
NdeII GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
NgoMIV GCCGGC 1 cut(s) 110
NheI GCTAGC 1 cut(s) 82
NlaIV GGNNCC 7 cut(s) 297, 593, 979, 980, 1103, 1104, 1214
NmuCI GTSAC 3 cut(s) 121, 479, 1040
NsiI ATGCAT 1 cut(s) 491
NspI RCATGY 2 cut(s) 776, 1293
PaeI GCATGC 1 cut(s) 776
PaeR7I CTCGAG 2 cut(s) 669, 707
PciI ACATGT 1 cut(s) 1289
PciSI GCTCTTC 1 cut(s) 1420
PcsI WCGNNNNNNNCGW 2 cut(s) 435, 705
PctI GAATGC 2 cut(s) 558, 578
PdiI GCCGGC 1 cut(s) 112
PfeI GAWTC 3 cut(s) 186, 433, 1482
PflFI GACNNNGTC 1 cut(s) 269
PkrI GCNGC 9 cut(s) 96, 355, 363, 418, 470, 519, 829, 832, 1027
Ple19I CGATCG 1 cut(s) 1308
PleI GAGTC 4 cut(s) 476, 718, 869, 1202
PluTI GGCGCC 1 cut(s) 299
PmaCI CACGTG 1 cut(s) 935
PmlI CACGTG 1 cut(s) 935
PpsI GAGTC 4 cut(s) 476, 718, 869, 1202
Ppu21I YACGTR 2 cut(s) 37, 935
PpuMI RGGWCCY 3 cut(s) 592, 978, 1117
PscI ACATGT 1 cut(s) 1289
Psp124BI GAGCTC 1 cut(s) 21
Psp5II RGGWCCY 3 cut(s) 592, 978, 1117
Psp6I CCWGG 2 cut(s) 315, 1119
PspCI CACGTG 1 cut(s) 935
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 2 cut(s) 315, 1119
PspN4I GGNNCC 7 cut(s) 297, 593, 979, 980, 1103, 1104, 1214
PspOMI GGGCCC 1 cut(s) 1101
PspPPI RGGWCCY 3 cut(s) 592, 978, 1117
PspXI VCTCGAGB 2 cut(s) 669, 707
PstI CTGCAG 1 cut(s) 355
PstNI CAGNNNCTG 1 cut(s) 474
PsuI RGATCY 1 cut(s) 659
PsyI GACNNNGTC 1 cut(s) 269
PvuI CGATCG 1 cut(s) 1308
PvuII CAGCTG 2 cut(s) 361, 517
RsaI GTAC 3 cut(s) 39, 604, 1072
RsaNI GTAC 3 cut(s) 38, 603, 1071
RseI CAYNNNNRTG 1 cut(s) 1533
SacI GAGCTC 1 cut(s) 21
SapI GCTCTTC 1 cut(s) 1420
SaqAI TTAA 3 cut(s) 690, 969, 1328
SatI GCNGC 9 cut(s) 95, 354, 362, 417, 469, 518, 828, 831, 1026
Sau3AI GATC 6 cut(s) 232, 659, 1298, 1305, 1317, 1369
ScaI AGTACT 1 cut(s) 604
SchI GAGTC 4 cut(s) 476, 719, 869, 1203
ScrFI CCNGG 4 cut(s) 317, 629, 1052, 1121
SduI GDGCHC 4 cut(s) 21, 627, 1035, 1105
SfaNI GCATC 3 cut(s) 123, 316, 498
SfcI CTRYAG 1 cut(s) 351
SfoI GGCGCC 1 cut(s) 297
Sfr274I CTCGAG 2 cut(s) 669, 707
SinI GGWCC 5 cut(s) 285, 592, 764, 978, 1117
SlaI CTCGAG 2 cut(s) 669, 707
SmiMI CAYNNNNRTG 1 cut(s) 1533
SmlI CTYRAG 3 cut(s) 669, 707, 1450
SmoI CTYRAG 3 cut(s) 669, 707, 1450
SphI GCATGC 1 cut(s) 776
Sse9I AATT 8 cut(s) 408, 501, 897, 941, 1165, 1182, 1373, 1458
SspDI GGCGCC 1 cut(s) 295
SspI AATATT 1 cut(s) 751
SspMI CTAG 4 cut(s) 83, 947, 1220, 1430
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 4 cut(s) 315, 627, 1050, 1119
StyI CCWWGG 1 cut(s) 87
TaaI ACNGT 5 cut(s) 550, 760, 854, 1135, 1489
TaiI ACGT 4 cut(s) 39, 123, 345, 937
TaqI TCGA 8 cut(s) 339, 621, 670, 699, 708, 739, 1301, 1308
TasI AATT 8 cut(s) 408, 501, 897, 941, 1165, 1182, 1373, 1458
TatI WGTACW 1 cut(s) 602
TauI GCSGC 3 cut(s) 419, 830, 833
TfiI GAWTC 3 cut(s) 186, 433, 1482
Tru1I TTAA 3 cut(s) 690, 969, 1328
Tru9I TTAA 3 cut(s) 690, 969, 1328
TscAI CASTG 1 cut(s) 1179
TseFI GTSAC 3 cut(s) 121, 479, 1040
TseI GCWGC 6 cut(s) 94, 353, 361, 468, 517, 1025
Tsp45I GTSAC 3 cut(s) 121, 479, 1040
TspDTI ATGAA 5 cut(s) 546, 1143, 1295, 1407, 1482
TspGWI ACGGA 2 cut(s) 975, 1030
TspRI CASTG 1 cut(s) 1179
Tth111I GACNNNGTC 1 cut(s) 269
VpaK11BI GGWCC 5 cut(s) 285, 592, 764, 978, 1117
XapI RAATTY 2 cut(s) 1165, 1458
XceI RCATGY 2 cut(s) 776, 1293
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 1206
XhoI CTCGAG 2 cut(s) 669, 707
XspI CTAG 4 cut(s) 83, 947, 1220, 1430
ZraI GACGTC 1 cut(s) 343
ZrmI AGTACT 1 cut(s) 604
Zsp2I ATGCAT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.