Rroxscaffold_6G00415770

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000638
Physical Location & Seq
Reverse (-)
37934841 .. 37938372
3532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00415770.1

Sequence Viewer

Length: 1458 bp
ATGGAGACGCATATGGAGCTCCAGCCACACGTGCTACTATTGCCCTTCCCAGCACAAGGCCACATCAAGCCCATGCTAGCCTTGGCGCAGCTTCTCTGCCACGCCGGCATCCACGTCACCTTCCTCAACACCGAGCACAACCACCGCCAGCTCACCCAACGCCAAGCCCTCTCCGCCCGATTCCCTACTCTCCACTTCCACTCCATCTCCGACGGCCTTCCCTGCGATAATCCACGCTCCCTTTCCTCTAATTTCATGGACATAGTCACGTCCTTGAGGTCCAAAACGGCGCCACTCCTGCATCAACTCCTGGTCTCCCTCACAAGCAAAATCGACGTCTGCTCTGCAGCTCAGTTGCCTCCTTTGGGCTGTGTGATAACGGACTGGCTCATGTGTTTCGCAATTGAAGGGGCGGAGGAGGTCGGAATTCCAGTGATTGCCTTCCGCACCACCAGCGCTTGCAGCTTCTGGTGTGACTCATGCATCCCCAAGCTAATTGAAGAAGCTCAGCTGCCTTTTGGAGATGAAGATATGGATATGACGGTGAGAGGCATTCTTGGGATGGAATGCCTTTTACGACGAAGGGACCTACCGAGTATTTGCAGATTACCAATCGAGCACCCGGTTATGCAGTTTTACATGGAAGAGGCCAGATCCATAACTCGAGCTTCCAGTCTCATTATTAACACCTTCGACGACCTCGAGTCTTCAGTTCTCTCCCACATTGCATCTCGATTTTCAAATATTTACACCGTCGGACTATTGCATGCTCTCCTCAAATCCCGTTTCGTGGACGACAACCCATCTTCCTCATCCTCCTCCGCAGCCTCTTTGCGCCAAGAAGACCGTGGTTGCATGATGTGGCTGGACTCCCAAAGGGTTAGGTCTGTTATTTTCGTGAGCTTCGGAAGTGTAGTGAAACTAACTCGTGTTCAATTACTAGAGTTTTGGCACGGATTGGTTAATAGTGGGTCCCCTTTTCTATGGGTCATCCGCTCAGATTTGCTACGGAGTAGCGCAGGAGAGCACTCAAGTCACGTAACCTCGGCGGAGTTGGAGATAGGTACAAAGCAACGGGGGTTTATAGTGGATTGGGCCCCGCAAGAAGAGGTCCTGGCCCATGAAGCTGTGGGTGGGTTTTTGACCCATAGCGGGTGGAGTTCGACACTGGAGGCAATTTGGGCCGGAGTCCCCATGCTTTGCTGGCCCCAACTAGCCGACCAACAGGTGAATAGTAGATGGGTTGGAGAGGTTTGGAAGATTGGGGTTGATATGAAGGACATATGTGATAGATCGACGATGGAGAAGATGATCGAAACCTTAATGGAAGGTAAAGAAAGAGATGTGATTTCAAGGTCGGTCGATCGGTTTGCAAAATTGGCGCGGACTTCTGTTGAAGAAAGTGGCTCTTCATACCGTAACTTAGAGAAACTTATTCAATACTTAAGAAATTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

485

Amino Acids

54.41

Weight (kDa)

5.91

Isoelectric Point (pI)

56.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 11 - 70 3.5e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 280 - 445 1.1e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 339
AccB1I GGYRCC 1 cut(s) 289
AccBSI CCGCTC 1 cut(s) 996
AccII CGCG 1 cut(s) 1384
AclWI GGATC 1 cut(s) 648
AcsI RAATTY 2 cut(s) 426, 1450
AcuI CTGAAG 1 cut(s) 693
AcvI CACGTG 1 cut(s) 31
AcyI GRCGYC 2 cut(s) 290, 336
AfaI GTAC 1 cut(s) 1066
AfeI AGCGCT 1 cut(s) 457
AfiI CCNNNNNNNGG 4 cut(s) 56, 365, 790, 1152
AflII CTTAAG 1 cut(s) 1444
AflIII ACRYGT 1 cut(s) 28
AgsI TTSAA 7 cut(s) 407, 500, 741, 935, 1353, 1397, 1439
AhdI GACNNNNNGTC 1 cut(s) 703
AjiI CACGTC 2 cut(s) 115, 270
AjnI CCWGG 2 cut(s) 309, 1113
Alw21I GWGCWC 4 cut(s) 21, 138, 621, 1029
Alw26I GTCTC 2 cut(s) 319, 680
AlwI GGATC 1 cut(s) 648
AlwNI CAGNNNCTG 1 cut(s) 468
Ama87I CYCGRG 2 cut(s) 663, 701
Aor51HI AGCGCT 1 cut(s) 457
AoxI GGCC 7 cut(s) 58, 214, 648, 1095, 1116, 1182, 1205
ApaI GGGCCC 1 cut(s) 1099
ApeKI GCWGC 5 cut(s) 88, 347, 462, 511, 824
ApoI RAATTY 2 cut(s) 426, 1450
ArsI GACNNNNNNTTYG 2 cut(s) 321, 353
AspLEI GCGC 6 cut(s) 88, 292, 458, 837, 1019, 1384
AspS9I GGNCC 9 cut(s) 279, 586, 972, 1095, 1096, 1111, 1117, 1182, 1206
AsuC2I CCSGG 1 cut(s) 623
AsuHPI GGTGA 4 cut(s) 109, 145, 556, 1240
AsuNHI GCTAGC 1 cut(s) 76
AvaI CYCGRG 2 cut(s) 663, 701
AvaII GGWCC 4 cut(s) 279, 586, 972, 1111
BaeGI GKGCMC 1 cut(s) 1099
BanI GGYRCC 1 cut(s) 289
BanII GRGCYC 2 cut(s) 21, 1099
BauI CACGAG 1 cut(s) 927
BbrPI CACGTG 1 cut(s) 31
BbsI GAAGAC 2 cut(s) 699, 849
Bbv12I GWGCWC 4 cut(s) 21, 138, 621, 1029
BbvI GCAGC 5 cut(s) 100, 359, 474, 498, 836
BccI CCATC 5 cut(s) 212, 556, 811, 1233, 1294
BceAI ACGGC 2 cut(s) 229, 303
BcgI CGANNNNNNTGC 2 cut(s) 1352, 1386
BciT130I CCWGG 2 cut(s) 311, 1115
BcnI CCSGG 1 cut(s) 623
BcoDI GTCTC 2 cut(s) 319, 680
BfaI CTAG 3 cut(s) 77, 941, 1214
BfmI CTRYAG 1 cut(s) 345
BfoI RGCGCY 2 cut(s) 293, 459
BfrI CTTAAG 1 cut(s) 1444
BglI GCCNNNNNGGC 1 cut(s) 105
BisI GCNGC 5 cut(s) 89, 348, 463, 512, 825
BlpI GCTNAGC 1 cut(s) 507
BlsI GCNGC 5 cut(s) 90, 349, 464, 513, 826
Bme1390I CCNGG 3 cut(s) 311, 623, 1115
Bme18I GGWCC 4 cut(s) 279, 586, 972, 1111
BmeRI GACNNNNNGTC 1 cut(s) 703
BmeT110I CYCGRG 2 cut(s) 663, 701
BmgBI CACGTC 2 cut(s) 115, 270
BmgT120I GGNCC 9 cut(s) 279, 586, 972, 1095, 1096, 1111, 1117, 1182, 1206
BmiI GGNNCC 7 cut(s) 291, 587, 973, 974, 1097, 1098, 1208
BmrFI CCNGG 3 cut(s) 311, 623, 1115
BmsI GCATC 4 cut(s) 117, 310, 492, 737
BmtI GCTAGC 1 cut(s) 80
BpiI GAAGAC 2 cut(s) 699, 849
BpmI CTGGAG 2 cut(s) 5, 1190
Bpu1102I GCTNAGC 1 cut(s) 507
BpuEI CTTGAG 2 cut(s) 295, 1015
BpuMI CCSGG 1 cut(s) 623
BsaAI YACGTR 2 cut(s) 31, 1039
BsaHI GRCGYC 2 cut(s) 290, 336
BsaI GGTCTC 1 cut(s) 319
BsaJI CCNNGG 3 cut(s) 81, 847, 1044
BsaXI ACNNNNNCTCC 4 cut(s) 185, 191, 215, 221
Bsc4I CCNNNNNNNGG 4 cut(s) 56, 365, 790, 1152
Bse118I RCCGGY 1 cut(s) 104
Bse1I ACTGG 4 cut(s) 389, 431, 672, 1173
Bse3DI GCAATG 1 cut(s) 723
BseBI CCWGG 2 cut(s) 311, 1115
BseDI CCNNGG 3 cut(s) 81, 847, 1044
BseGI GGATG 5 cut(s) 108, 483, 567, 812, 990
BseLI CCNNNNNNNGG 4 cut(s) 56, 365, 790, 1152
BseMI GCAATG 1 cut(s) 723
BseMII CTCAG 3 cut(s) 365, 521, 1011
BseNI ACTGG 4 cut(s) 389, 431, 672, 1173
BseRI GAGGAG 3 cut(s) 431, 764, 808
BseSI GKGCMC 1 cut(s) 1099
BseXI GCAGC 5 cut(s) 100, 359, 474, 498, 836
BseYI CCCAGC 1 cut(s) 49
Bsh1236I CGCG 1 cut(s) 1384
Bsh1285I CGRYCG 2 cut(s) 1362, 1366
BshFI GGCC 7 cut(s) 60, 216, 650, 1097, 1118, 1184, 1207
BshNI GGYRCC 1 cut(s) 289
BsiEI CGRYCG 2 cut(s) 1362, 1366
BsiHKAI GWGCWC 4 cut(s) 21, 138, 621, 1029
BsiHKCI CYCGRG 2 cut(s) 663, 701
BsiSI CCGG 3 cut(s) 105, 623, 1185
BslFI GGGAC 3 cut(s) 599, 958, 1175
BslI CCNNNNNNNGG 4 cut(s) 56, 365, 790, 1152
BsmAI GTCTC 2 cut(s) 319, 680
BsmFI GGGAC 3 cut(s) 599, 958, 1175
BsmI GAATGC 2 cut(s) 552, 572
BsnI GGCC 7 cut(s) 60, 216, 650, 1097, 1118, 1184, 1207
Bso31I GGTCTC 1 cut(s) 319
BsoBI CYCGRG 2 cut(s) 663, 701
Bsp120I GGGCCC 1 cut(s) 1095
Bsp1286I GDGCHC 5 cut(s) 21, 138, 621, 1029, 1099
Bsp143I GATC 4 cut(s) 653, 1292, 1311, 1363
Bsp1720I GCTNAGC 1 cut(s) 507
BspANI GGCC 7 cut(s) 60, 216, 650, 1097, 1118, 1184, 1207
BspCNI CTCAG 3 cut(s) 364, 520, 1010
BspFNI CGCG 1 cut(s) 1384
BspLI GGNNCC 7 cut(s) 291, 587, 973, 974, 1097, 1098, 1208
BspMAI CTGCAG 1 cut(s) 349
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 1 cut(s) 648
BspQI GCTCTTC 1 cut(s) 1414
BspT107I GGYRCC 1 cut(s) 289
BspTI CTTAAG 1 cut(s) 1444
BspTNI GGTCTC 1 cut(s) 319
BsrBI CCGCTC 1 cut(s) 996
BsrDI GCAATG 1 cut(s) 723
BsrFI RCCGGY 1 cut(s) 104
BsrI ACTGG 4 cut(s) 389, 431, 672, 1173
BssAI RCCGGY 1 cut(s) 104
BssECI CCNNGG 3 cut(s) 81, 847, 1044
BssMI GATC 4 cut(s) 653, 1292, 1311, 1363
BssNI GRCGYC 2 cut(s) 290, 336
BssSI CACGAG 1 cut(s) 927
BssT1I CCWWGG 1 cut(s) 81
Bst2BI CACGAG 1 cut(s) 927
Bst2UI CCWGG 2 cut(s) 311, 1115
Bst4CI ACNGT 4 cut(s) 544, 754, 848, 1418
Bst6I CTCTTC 3 cut(s) 639, 1101, 1414
BstACI GRCGYC 2 cut(s) 290, 336
BstAFI CTTAAG 1 cut(s) 1444
BstBAI YACGTR 2 cut(s) 31, 1039
BstC8I GCNNGC 6 cut(s) 78, 106, 149, 460, 768, 1205
BstDEI CTNAG 4 cut(s) 351, 507, 997, 1423
BstDSI CCRYGG 1 cut(s) 847
BstF5I GGATG 5 cut(s) 108, 483, 567, 812, 990
BstFNI CGCG 1 cut(s) 1384
BstH2I RGCGCY 2 cut(s) 293, 459
BstHHI GCGC 6 cut(s) 88, 292, 458, 837, 1019, 1384
BstKTI GATC 4 cut(s) 656, 1295, 1314, 1366
BstMAI GTCTC 2 cut(s) 319, 680
BstMBI GATC 4 cut(s) 653, 1292, 1311, 1363
BstMCI CGRYCG 2 cut(s) 1362, 1366
BstNI CCWGG 2 cut(s) 311, 1115
BstNSI RCATGY 1 cut(s) 770
BstSCI CCNGG 3 cut(s) 309, 621, 1113
BstSFI CTRYAG 1 cut(s) 345
BstSLI GKGCMC 1 cut(s) 1099
BstUI CGCG 1 cut(s) 1384
BstV1I GCAGC 5 cut(s) 100, 359, 474, 498, 836
BstV2I GAAGAC 2 cut(s) 699, 849
BstX2I RGATCY 1 cut(s) 653
BstYI RGATCY 1 cut(s) 653
BsuRI GGCC 7 cut(s) 60, 216, 650, 1097, 1118, 1184, 1207
BtgI CCRYGG 1 cut(s) 847
BtrI CACGTC 2 cut(s) 115, 270
BtsCI GGATG 5 cut(s) 108, 483, 567, 812, 990
BtsIMutI CAGTG 2 cut(s) 438, 1166
Cac8I GCNNGC 6 cut(s) 78, 106, 149, 460, 768, 1205
CaiI CAGNNNCTG 1 cut(s) 468
CfoI GCGC 6 cut(s) 88, 292, 458, 837, 1019, 1384
Cfr10I RCCGGY 1 cut(s) 104
Cfr13I GGNCC 9 cut(s) 279, 586, 972, 1095, 1096, 1111, 1117, 1182, 1206
CseI GACGC 1 cut(s) 16
Csp6I GTAC 1 cut(s) 1065
CviAII CATG 9 cut(s) 73, 256, 391, 480, 640, 767, 856, 1121, 1195
CviQI GTAC 1 cut(s) 1065
DdeI CTNAG 4 cut(s) 351, 507, 997, 1423
DinI GGCGCC 1 cut(s) 291
DpnI GATC 4 cut(s) 655, 1294, 1313, 1365
DpnII GATC 4 cut(s) 653, 1292, 1311, 1363
DriI GACNNNNNGTC 1 cut(s) 703
Eam1104I CTCTTC 3 cut(s) 639, 1101, 1414
Eam1105I GACNNNNNGTC 1 cut(s) 703
EarI CTCTTC 3 cut(s) 639, 1101, 1414
EciI GGCGGA 3 cut(s) 163, 428, 1064
Ecl136II GAGCTC 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 81
Eco24I GRGCYC 2 cut(s) 21, 1099
Eco31I GGTCTC 1 cut(s) 319
Eco47I GGWCC 4 cut(s) 279, 586, 972, 1111
Eco47III AGCGCT 1 cut(s) 457
Eco53kI GAGCTC 1 cut(s) 19
Eco57I CTGAAG 1 cut(s) 693
Eco72I CACGTG 1 cut(s) 31
Eco88I CYCGRG 2 cut(s) 663, 701
EcoICRI GAGCTC 1 cut(s) 19
EcoO109I RGGNCCY 4 cut(s) 586, 972, 1096, 1111
EcoRI GAATTC 1 cut(s) 426
EcoRII CCWGG 2 cut(s) 309, 1113
EcoT14I CCWWGG 1 cut(s) 81
EcoT22I ATGCAT 1 cut(s) 485
EcoT38I GRGCYC 2 cut(s) 21, 1099
EgeI GGCGCC 1 cut(s) 291
EheI GGCGCC 1 cut(s) 291
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 9 cut(s) 76, 259, 394, 483, 643, 770, 859, 1124, 1198
FalI AAGNNNNNCTT 2 cut(s) 1393, 1425
FaqI GGGAC 3 cut(s) 599, 958, 1175
FatI CATG 9 cut(s) 72, 255, 390, 479, 639, 766, 855, 1120, 1194
FauI CCCGC 2 cut(s) 1107, 1145
FauNDI CATATG 2 cut(s) 12, 1283
Fnu4HI GCNGC 5 cut(s) 89, 348, 463, 512, 825
FokI GGATG 5 cut(s) 95, 470, 574, 799, 977
FriOI GRGCYC 2 cut(s) 21, 1099
Fsp4HI GCNGC 5 cut(s) 89, 348, 463, 512, 825
FspBI CTAG 3 cut(s) 77, 941, 1214
GlaI GCGC 6 cut(s) 87, 291, 457, 836, 1018, 1383
GluI GCNGC 5 cut(s) 89, 348, 463, 512, 825
GsaI CCCAGC 1 cut(s) 53
GsuI CTGGAG 2 cut(s) 5, 1190
HaeII RGCGCY 2 cut(s) 293, 459
HaeIII GGCC 7 cut(s) 60, 216, 650, 1097, 1118, 1184, 1207
HapII CCGG 3 cut(s) 105, 623, 1185
HgaI GACGC 1 cut(s) 16
HhaI GCGC 6 cut(s) 88, 292, 458, 837, 1019, 1384
Hin1I GRCGYC 2 cut(s) 290, 336
Hin1II CATG 9 cut(s) 76, 259, 394, 483, 643, 770, 859, 1124, 1198
Hin6I GCGC 6 cut(s) 86, 290, 456, 835, 1017, 1382
HinP1I GCGC 6 cut(s) 86, 290, 456, 835, 1017, 1382
HinfI GANTC 5 cut(s) 180, 476, 704, 869, 1188
HpaII CCGG 3 cut(s) 105, 623, 1185
HphI GGTGA 4 cut(s) 109, 145, 556, 1240
Hpy166II GTNNAC 1 cut(s) 793
Hpy188I TCNGA 5 cut(s) 211, 425, 758, 908, 1000
Hpy188III TCNNGA 2 cut(s) 732, 898
Hpy8I GTNNAC 1 cut(s) 793
Hpy99I CGWCG 6 cut(s) 215, 338, 582, 698, 758, 1300
HpyAV CCTTC 9 cut(s) 55, 130, 227, 401, 451, 576, 700, 1270, 1322
HpyCH4III ACNGT 4 cut(s) 544, 754, 848, 1418
HpyCH4IV ACGT 5 cut(s) 30, 114, 269, 336, 1038
HpyF3I CTNAG 4 cut(s) 351, 507, 997, 1423
HpySE526I ACGT 5 cut(s) 30, 114, 269, 336, 1038
Hsp92I GRCGYC 2 cut(s) 290, 336
Hsp92II CATG 9 cut(s) 76, 259, 394, 483, 643, 770, 859, 1124, 1198
HspAI GCGC 6 cut(s) 86, 290, 456, 835, 1017, 1382
KasI GGCGCC 1 cut(s) 289
KflI GGGWCCC 1 cut(s) 972
KroI GCCGGC 1 cut(s) 104
KroNI GCCGGC 1 cut(s) 106
Kzo9I GATC 4 cut(s) 653, 1292, 1311, 1363
LguI GCTCTTC 1 cut(s) 1414
LmnI GCTCC 3 cut(s) 16, 24, 242
Lsp1109I GCAGC 5 cut(s) 100, 359, 474, 498, 836
LweI GCATC 4 cut(s) 117, 310, 492, 737
MaeI CTAG 3 cut(s) 77, 941, 1214
MaeII ACGT 5 cut(s) 30, 114, 269, 336, 1038
MaeIII GTNAC 6 cut(s) 115, 265, 473, 1034, 1039, 1418
MalI GATC 4 cut(s) 655, 1294, 1313, 1365
MbiI CCGCTC 1 cut(s) 996
MboI GATC 4 cut(s) 653, 1292, 1311, 1363
MfeI CAATTG 1 cut(s) 402
MflI RGATCY 1 cut(s) 653
MhlI GDGCHC 5 cut(s) 21, 138, 621, 1029, 1099
MluCI AATT 8 cut(s) 250, 402, 426, 495, 935, 1176, 1376, 1450
Mly113I GGCGCC 1 cut(s) 290
MlyI GAGTC 4 cut(s) 470, 713, 863, 1197
MmeI TCCRAC 5 cut(s) 234, 403, 736, 1035, 1225
Mph1103I ATGCAT 1 cut(s) 485
MroNI GCCGGC 1 cut(s) 104
MseI TTAA 4 cut(s) 684, 963, 1322, 1445
MspA1I CMGCKG 1 cut(s) 511
MspCI CTTAAG 1 cut(s) 1444
MspI CCGG 3 cut(s) 105, 623, 1185
MspR9I CCNGG 3 cut(s) 311, 623, 1115
MunI CAATTG 1 cut(s) 402
Mva1269I GAATGC 2 cut(s) 552, 572
MvaI CCWGG 2 cut(s) 311, 1115
MvnI CGCG 1 cut(s) 1384
NaeI GCCGGC 1 cut(s) 106
NarI GGCGCC 1 cut(s) 290
NciI CCSGG 1 cut(s) 623
NdeI CATATG 2 cut(s) 12, 1283
NdeII GATC 4 cut(s) 653, 1292, 1311, 1363
NgoMIV GCCGGC 1 cut(s) 104
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 9 cut(s) 76, 259, 394, 483, 643, 770, 859, 1124, 1198
NlaIV GGNNCC 7 cut(s) 291, 587, 973, 974, 1097, 1098, 1208
NmeAIII GCCGAG 1 cut(s) 1025
NmuCI GTSAC 4 cut(s) 115, 265, 473, 1034
NsiI ATGCAT 1 cut(s) 485
NspI RCATGY 1 cut(s) 770
PaeI GCATGC 1 cut(s) 770
PaeR7I CTCGAG 2 cut(s) 663, 701
PciSI GCTCTTC 1 cut(s) 1414
PcsI WCGNNNNNNNCGW 1 cut(s) 699
PctI GAATGC 2 cut(s) 552, 572
PdiI GCCGGC 1 cut(s) 106
PfeI GAWTC 1 cut(s) 180
PflFI GACNNNGTC 1 cut(s) 263
PkrI GCNGC 5 cut(s) 90, 349, 464, 513, 826
Ple19I CGATCG 1 cut(s) 1366
PleI GAGTC 4 cut(s) 470, 712, 863, 1196
PluTI GGCGCC 1 cut(s) 293
PmaCI CACGTG 1 cut(s) 31
PmlI CACGTG 1 cut(s) 31
PpsI GAGTC 4 cut(s) 470, 712, 863, 1196
Ppu21I YACGTR 2 cut(s) 31, 1039
PpuMI RGGWCCY 3 cut(s) 586, 972, 1111
Psp124BI GAGCTC 1 cut(s) 21
Psp5II RGGWCCY 3 cut(s) 586, 972, 1111
Psp6I CCWGG 2 cut(s) 309, 1113
PspCI CACGTG 1 cut(s) 31
PspFI CCCAGC 1 cut(s) 49
PspGI CCWGG 2 cut(s) 309, 1113
PspN4I GGNNCC 7 cut(s) 291, 587, 973, 974, 1097, 1098, 1208
PspOMI GGGCCC 1 cut(s) 1095
PspPI GGNCC 9 cut(s) 279, 586, 972, 1095, 1096, 1111, 1117, 1182, 1206
PspPPI RGGWCCY 3 cut(s) 586, 972, 1111
PspXI VCTCGAGB 2 cut(s) 663, 701
PstI CTGCAG 1 cut(s) 349
PstNI CAGNNNCTG 1 cut(s) 468
PsuI RGATCY 1 cut(s) 653
PsyI GACNNNGTC 1 cut(s) 263
PvuI CGATCG 1 cut(s) 1366
PvuII CAGCTG 1 cut(s) 511
RsaI GTAC 1 cut(s) 1066
RsaNI GTAC 1 cut(s) 1065
SacI GAGCTC 1 cut(s) 21
SapI GCTCTTC 1 cut(s) 1414
SaqAI TTAA 4 cut(s) 684, 963, 1322, 1445
SatI GCNGC 5 cut(s) 89, 348, 463, 512, 825
Sau3AI GATC 4 cut(s) 653, 1292, 1311, 1363
Sau96I GGNCC 9 cut(s) 279, 586, 972, 1095, 1096, 1111, 1117, 1182, 1206
SchI GAGTC 4 cut(s) 470, 713, 863, 1197
ScrFI CCNGG 3 cut(s) 311, 623, 1115
SduI GDGCHC 5 cut(s) 21, 138, 621, 1029, 1099
SfaNI GCATC 4 cut(s) 117, 310, 492, 737
SfcI CTRYAG 1 cut(s) 345
SfoI GGCGCC 1 cut(s) 291
Sfr274I CTCGAG 2 cut(s) 663, 701
SinI GGWCC 4 cut(s) 279, 586, 972, 1111
SlaI CTCGAG 2 cut(s) 663, 701
SmlI CTYRAG 5 cut(s) 274, 663, 701, 1030, 1444
SmoI CTYRAG 5 cut(s) 274, 663, 701, 1030, 1444
SphI GCATGC 1 cut(s) 770
Sse9I AATT 8 cut(s) 250, 402, 426, 495, 935, 1176, 1376, 1450
SspDI GGCGCC 1 cut(s) 289
SspI AATATT 1 cut(s) 745
SspMI CTAG 3 cut(s) 77, 941, 1214
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 3 cut(s) 309, 621, 1113
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 4 cut(s) 544, 754, 848, 1418
TaiI ACGT 5 cut(s) 33, 117, 272, 339, 1041
TaqII GACCGA 1 cut(s) 1348
TasI AATT 8 cut(s) 250, 402, 426, 495, 935, 1176, 1376, 1450
TfiI GAWTC 1 cut(s) 180
Tru1I TTAA 4 cut(s) 684, 963, 1322, 1445
Tru9I TTAA 4 cut(s) 684, 963, 1322, 1445
TscAI CASTG 2 cut(s) 438, 1173
TseFI GTSAC 4 cut(s) 115, 265, 473, 1034
TseI GCWGC 5 cut(s) 88, 347, 462, 511, 824
Tsp45I GTSAC 4 cut(s) 115, 265, 473, 1034
TspDTI ATGAA 5 cut(s) 244, 540, 1137, 1289, 1401
TspGWI ACGGA 3 cut(s) 395, 969, 1024
TspRI CASTG 2 cut(s) 438, 1173
Tth111I GACNNNGTC 1 cut(s) 263
Vha464I CTTAAG 1 cut(s) 1444
VpaK11BI GGWCC 4 cut(s) 279, 586, 972, 1111
XapI RAATTY 2 cut(s) 426, 1450
XceI RCATGY 1 cut(s) 770
XcmI CCANNNNNNNNNTGG 2 cut(s) 79, 845
XhoI CTCGAG 2 cut(s) 663, 701
XspI CTAG 3 cut(s) 77, 941, 1214
ZraI GACGTC 1 cut(s) 337
Zsp2I ATGCAT 1 cut(s) 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.