Rroxscaffold_1G00025190

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000638
Physical Location & Seq
Forward (+)
31640472 .. 31643690
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00025190.1

Sequence Viewer

Length: 1425 bp
ATGGAGAAATCTCAATCTCACATAGTGATCTTTCCATTGCCGCTACAAGGCCACATCAAACCCTTGCTATGCTTAGCAGAGCTTCTCTGCCATGCAGGCCTTCACGTCACCTTCGTCAACACCCGCCACAACCACAACCGCTTAGCGGACCTCCCTGCCCTCTCCGCCCACTTCCCCACCCTCCATTTCGAGTCCATCTTGGACGGTCTCCCCGATGACCACCCACGCACTTTGAGCAGCGAGTTGTTGATCGCATTGAAGACGTCAATTAAGCCTCATTTTAAGGAGCTGCTCCAGTCATCCCTTAAGCCCAACGGTTTTGCCCTGCCGCCGCCAACATGTATTATAACAGATGGACTCGGGACTTTCGCCTTTGATGTTGCAGAAGAGTTGGGGTTGCCCATACTGAGTTATAATGTTGCTTGTGCTCCTTACTTGTGGATTTGTCTTTGTCTCCCCAACCTCATCGAACAAGGCCAGCTTCCTTTCCCAGATGACGACATGAATGTGGAAATCACTGGCGTCCCCGGAATGGAAGGCCTTCTGCGACGTGTAGATTTACCTGGATTTTGCAGGGTAAAACAGTCGAGCCACCCTATTCTTCAATTCGCCATCCACGAAACTCAGACACAAAAACGAGCTTCAGCTCTAATCCTCGACGCCGTTAACGAACTCGATGCTCCGTGTCTATCCCATATGGCCAACATGTTCCCCAAAATTTACACTCTTGGGCCTCTCCACTCTCTCCTACATTCTCAAATCGGCGACGTCTCGCGATCACTAGCATCACTCGGCGGTCTTTGGAAGGGGGATCCAAATTGCATGATATGGCTCGACTCTCAGCCAGCCAAATCGGTTCTTTATGTCAGCTTCGGAACCCTAGTGACCTTGACACGTACCCAAATCATGGAGTTTTGGTACGGTCTGGTCAACAGTGGGCACCCGTTCTTGTGGGTTGTGCAGTCCGACCTCACTTCGGGTTTAGATGGAGACCCGATTCCCATGGAGCTTGAAATTGGGACAAAAGAAAGAGGGTACATAGCGAATTGGGTCTCGCAAGAGGAAGTCTTGGCTCACAAGTCAGTGGGTGGGTTCTTGACCCACAGCGGATGGAACTCTACCCAAGAGAGCATTGTAGCAGGAATTCCTATGATTTGTTGGCCTAAGTTTGGGGATCATTACATCATTAGCAGAGCTGTTAGTGAGAAGTGGAAGGTTGGTCTTCGATTGAAAGAAAACTGTGACAGAAGGGACATTGAAACCATGATAAGAATGTTGATGGAATTTAAGAGGGGAGAGATTCAGAGCTCAATGGATGCAATTTCAAAAGTGGCTCGTGATAGCGTTGCGAAAGGTGGATCTTCAAACCACAACTTGGAGATGCTAATCCAAGACATTAGGAATATGCATGCAAGACCACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

474

Amino Acids

52.71

Weight (kDa)

6.08

Isoelectric Point (pI)

52.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 276 - 428 8.3e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 347, 414
AatII GACGTC 2 cut(s) 266, 771
AccB1I GGYRCC 1 cut(s) 939
AccB7I CCANNNNNTGG 2 cut(s) 907, 1375
AccII CGCG 1 cut(s) 775
AciI CCGC 9 cut(s) 41, 124, 139, 146, 165, 329, 332, 795, 1107
AclWI GGATC 4 cut(s) 806, 819, 1182, 1366
AcoI YGGCCR 1 cut(s) 699
AcsI RAATTY 3 cut(s) 717, 1143, 1283
AcuI CTGAAG 1 cut(s) 627
AcyI GRCGYC 4 cut(s) 263, 522, 660, 768
AdeI CACNNNGTG 1 cut(s) 25
AfaI GTAC 3 cut(s) 898, 920, 1037
AfiI CCNNNNNNNGG 7 cut(s) 47, 145, 532, 907, 976, 1169, 1375
AflII CTTAAG 1 cut(s) 305
AflIII ACRYGT 4 cut(s) 338, 550, 705, 893
AgsI TTSAA 7 cut(s) 259, 605, 1013, 1231, 1259, 1326, 1365
AjiI CACGTC 2 cut(s) 106, 551
AjnI CCWGG 1 cut(s) 562
AluBI AGCT 9 cut(s) 82, 289, 481, 641, 647, 870, 1009, 1196, 1308
AluI AGCT 9 cut(s) 82, 289, 481, 641, 647, 870, 1009, 1196, 1308
Alw21I GWGCWC 2 cut(s) 430, 1310
Alw26I GTCTC 5 cut(s) 212, 458, 775, 984, 1057
AlwI GGATC 4 cut(s) 806, 819, 1182, 1366
Ama87I CYCGRG 1 cut(s) 359
AoxI GGCC 7 cut(s) 49, 97, 475, 538, 699, 731, 1160
ApeKI GCWGC 2 cut(s) 237, 289
ApoI RAATTY 3 cut(s) 717, 1143, 1283
Asp700I GAANNNNTTC 1 cut(s) 540
AspS9I GGNCC 2 cut(s) 148, 731
AsuC2I CCSGG 1 cut(s) 528
AsuHPI GGTGA 1 cut(s) 100
AvaI CYCGRG 1 cut(s) 359
AvaII GGWCC 1 cut(s) 148
BaeGI GKGCMC 1 cut(s) 942
BalI TGGCCA 1 cut(s) 701
BamHI GGATCC 1 cut(s) 811
BanI GGYRCC 1 cut(s) 939
BanII GRGCYC 1 cut(s) 1310
BauI CACGAG 1 cut(s) 1335
BbsI GAAGAC 2 cut(s) 266, 1214
Bbv12I GWGCWC 2 cut(s) 430, 1310
BbvI GCAGC 2 cut(s) 249, 276
BccI CCATC 6 cut(s) 203, 347, 620, 980, 1104, 1273
BceAI ACGGC 1 cut(s) 647
BcgI CGANNNNNNTGC 2 cut(s) 659, 693
BciT130I CCWGG 1 cut(s) 564
BcnI CCSGG 1 cut(s) 528
BcoDI GTCTC 5 cut(s) 212, 458, 775, 984, 1057
BfaI CTAG 2 cut(s) 782, 881
BfrI CTTAAG 1 cut(s) 305
BglI GCCNNNNNGGC 1 cut(s) 96
BisI GCNGC 5 cut(s) 41, 238, 290, 329, 332
BlpI GCTNAGC 2 cut(s) 73, 142
BlsI GCNGC 5 cut(s) 42, 239, 291, 330, 333
Bme1390I CCNGG 2 cut(s) 528, 564
Bme18I GGWCC 1 cut(s) 148
BmeT110I CYCGRG 1 cut(s) 359
BmgBI CACGTC 2 cut(s) 106, 551
BmgT120I GGNCC 2 cut(s) 148, 731
BmiI GGNNCC 3 cut(s) 813, 877, 941
BmrFI CCNGG 2 cut(s) 528, 564
BmsI GCATC 4 cut(s) 667, 794, 1306, 1371
BpiI GAAGAC 2 cut(s) 266, 1214
BpmI CTGGAG 1 cut(s) 278
Bpu1102I GCTNAGC 2 cut(s) 73, 142
BpuMI CCSGG 1 cut(s) 528
BsaAI YACGTR 1 cut(s) 896
BsaBI GATNNNNATC 1 cut(s) 1385
BsaHI GRCGYC 4 cut(s) 263, 522, 660, 768
BsaI GGTCTC 3 cut(s) 212, 984, 1057
BsaJI CCNNGG 2 cut(s) 526, 1002
BsaXI ACNNNNNCTCC 2 cut(s) 902, 932
Bsc4I CCNNNNNNNGG 7 cut(s) 47, 145, 532, 907, 976, 1169, 1375
Bse1I ACTGG 2 cut(s) 295, 523
Bse3DI GCAATG 1 cut(s) 35
Bse8I GATNNNNATC 1 cut(s) 1385
BseBI CCWGG 1 cut(s) 564
BseDI CCNNGG 2 cut(s) 526, 1002
BseGI GGATG 4 cut(s) 299, 612, 1115, 1321
BseJI GATNNNNATC 1 cut(s) 1385
BseLI CCNNNNNNNGG 7 cut(s) 47, 145, 532, 907, 976, 1169, 1375
BseMI GCAATG 1 cut(s) 35
BseMII CTCAG 3 cut(s) 398, 638, 854
BseNI ACTGG 2 cut(s) 295, 523
BseSI GKGCMC 1 cut(s) 942
BseXI GCAGC 2 cut(s) 249, 276
BsgI GTGCAG 1 cut(s) 980
Bsh1236I CGCG 1 cut(s) 775
BshFI GGCC 7 cut(s) 51, 99, 477, 540, 701, 733, 1162
BshNI GGYRCC 1 cut(s) 939
BsiHKAI GWGCWC 2 cut(s) 430, 1310
BsiHKCI CYCGRG 1 cut(s) 359
BsiSI CCGG 1 cut(s) 528
BslFI GGGAC 4 cut(s) 376, 509, 1033, 1265
BslI CCNNNNNNNGG 7 cut(s) 47, 145, 532, 907, 976, 1169, 1375
BsmAI GTCTC 5 cut(s) 212, 458, 775, 984, 1057
BsmBI CGTCTC 1 cut(s) 775
BsmFI GGGAC 4 cut(s) 376, 509, 1033, 1265
BsnI GGCC 7 cut(s) 51, 99, 477, 540, 701, 733, 1162
Bso31I GGTCTC 3 cut(s) 212, 984, 1057
BsoBI CYCGRG 1 cut(s) 359
Bsp1286I GDGCHC 3 cut(s) 430, 942, 1310
Bsp143I GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
Bsp1720I GCTNAGC 2 cut(s) 73, 142
Bsp19I CCATGG 1 cut(s) 1002
Bsp68I TCGCGA 1 cut(s) 775
BspACI CCGC 9 cut(s) 41, 124, 139, 146, 165, 329, 332, 795, 1107
BspANI GGCC 7 cut(s) 51, 99, 477, 540, 701, 733, 1162
BspCNI CTCAG 3 cut(s) 399, 637, 853
BspFNI CGCG 1 cut(s) 775
BspLI GGNNCC 3 cut(s) 813, 877, 941
BspPI GGATC 4 cut(s) 806, 819, 1182, 1366
BspT107I GGYRCC 1 cut(s) 939
BspTI CTTAAG 1 cut(s) 305
BspTNI GGTCTC 3 cut(s) 212, 984, 1057
BsrDI GCAATG 1 cut(s) 35
BsrI ACTGG 2 cut(s) 295, 523
BssECI CCNNGG 2 cut(s) 526, 1002
BssMI GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
BssNI GRCGYC 4 cut(s) 263, 522, 660, 768
BssSI CACGAG 1 cut(s) 1335
BssT1I CCWWGG 1 cut(s) 1002
Bst2BI CACGAG 1 cut(s) 1335
Bst2UI CCWGG 1 cut(s) 564
Bst4CI ACNGT 7 cut(s) 206, 317, 585, 923, 935, 1241, 1422
Bst6I CTCTTC 1 cut(s) 381
BstACI GRCGYC 4 cut(s) 263, 522, 660, 768
BstAFI CTTAAG 1 cut(s) 305
BstBAI YACGTR 1 cut(s) 896
BstC8I GCNNGC 4 cut(s) 97, 479, 846, 1410
BstDEI CTNAG 6 cut(s) 73, 142, 407, 624, 840, 1164
BstDSI CCRYGG 1 cut(s) 1002
BstF5I GGATG 4 cut(s) 299, 612, 1115, 1321
BstFNI CGCG 1 cut(s) 775
BstKTI GATC 6 cut(s) 30, 252, 779, 814, 1177, 1361
BstMAI GTCTC 5 cut(s) 212, 458, 775, 984, 1057
BstMBI GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
BstMWI GCNNNNNNNGC 3 cut(s) 96, 164, 234
BstNI CCWGG 1 cut(s) 564
BstNSI RCATGY 3 cut(s) 342, 709, 1412
BstSCI CCNGG 2 cut(s) 526, 562
BstSLI GKGCMC 1 cut(s) 942
BstUI CGCG 1 cut(s) 775
BstV1I GCAGC 2 cut(s) 249, 276
BstV2I GAAGAC 2 cut(s) 266, 1214
BstX2I RGATCY 2 cut(s) 811, 1358
BstYI RGATCY 2 cut(s) 811, 1358
BsuRI GGCC 7 cut(s) 51, 99, 477, 540, 701, 733, 1162
BtgI CCRYGG 1 cut(s) 1002
BtrI CACGTC 2 cut(s) 106, 551
BtsCI GGATG 4 cut(s) 299, 612, 1115, 1321
BtsIMutI CAGTG 3 cut(s) 516, 940, 1089
BtuMI TCGCGA 1 cut(s) 775
Cac8I GCNNGC 4 cut(s) 97, 479, 846, 1410
Cfr13I GGNCC 2 cut(s) 148, 731
CseI GACGC 2 cut(s) 511, 668
Csp6I GTAC 3 cut(s) 897, 919, 1036
CspCI CAANNNNNGTGG 2 cut(s) 213, 248
CviAII CATG 9 cut(s) 92, 339, 502, 706, 823, 907, 1003, 1264, 1409
CviQI GTAC 3 cut(s) 897, 919, 1036
DdeI CTNAG 6 cut(s) 73, 142, 407, 624, 840, 1164
DpnI GATC 6 cut(s) 29, 251, 778, 813, 1176, 1360
DpnII GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
DraIII CACNNNGTG 1 cut(s) 25
EaeI YGGCCR 1 cut(s) 699
Eam1104I CTCTTC 1 cut(s) 381
EarI CTCTTC 1 cut(s) 381
EciI GGCGGA 1 cut(s) 154
Ecl136II GAGCTC 1 cut(s) 1308
Eco130I CCWWGG 1 cut(s) 1002
Eco147I AGGCCT 2 cut(s) 99, 540
Eco24I GRGCYC 1 cut(s) 1310
Eco31I GGTCTC 3 cut(s) 212, 984, 1057
Eco47I GGWCC 1 cut(s) 148
Eco53kI GAGCTC 1 cut(s) 1308
Eco57I CTGAAG 1 cut(s) 627
Eco88I CYCGRG 1 cut(s) 359
EcoICRI GAGCTC 1 cut(s) 1308
EcoRI GAATTC 1 cut(s) 1143
EcoRII CCWGG 1 cut(s) 562
EcoT14I CCWWGG 1 cut(s) 1002
EcoT22I ATGCAT 1 cut(s) 1410
EcoT38I GRGCYC 1 cut(s) 1310
ErhI CCWWGG 1 cut(s) 1002
Esp3I CGTCTC 1 cut(s) 775
FaeI CATG 9 cut(s) 95, 342, 505, 709, 826, 910, 1006, 1267, 1412
FalI AAGNNNNNCTT 2 cut(s) 465, 497
FaqI GGGAC 4 cut(s) 376, 509, 1033, 1265
FatI CATG 9 cut(s) 91, 338, 501, 705, 822, 906, 1002, 1263, 1408
FauI CCCGC 1 cut(s) 131
FauNDI CATATG 1 cut(s) 696
Fnu4HI GCNGC 5 cut(s) 41, 238, 290, 329, 332
FokI GGATG 4 cut(s) 286, 599, 1122, 1328
FriOI GRGCYC 1 cut(s) 1310
Fsp4HI GCNGC 5 cut(s) 41, 238, 290, 329, 332
FspBI CTAG 2 cut(s) 782, 881
GluI GCNGC 5 cut(s) 41, 238, 290, 329, 332
GsuI CTGGAG 1 cut(s) 278
HaeIII GGCC 7 cut(s) 51, 99, 477, 540, 701, 733, 1162
HapII CCGG 1 cut(s) 528
HgaI GACGC 2 cut(s) 511, 668
Hin1I GRCGYC 4 cut(s) 263, 522, 660, 768
Hin1II CATG 9 cut(s) 95, 342, 505, 709, 826, 910, 1006, 1267, 1412
HincII GTYRAC 3 cut(s) 118, 667, 931
HindII GTYRAC 3 cut(s) 118, 667, 931
HinfI GANTC 5 cut(s) 191, 357, 836, 997, 1300
HpaI GTTAAC 1 cut(s) 667
HpaII CCGG 1 cut(s) 528
HphI GGTGA 1 cut(s) 100
Hpy166II GTNNAC 3 cut(s) 118, 667, 931
Hpy188I TCNGA 4 cut(s) 627, 875, 967, 1305
Hpy188III TCNNGA 4 cut(s) 361, 774, 1096, 1337
Hpy8I GTNNAC 3 cut(s) 118, 667, 931
Hpy99I CGWCG 3 cut(s) 552, 662, 770
HpyAV CCTTC 7 cut(s) 110, 121, 530, 551, 799, 1207, 1242
HpyCH4III ACNGT 7 cut(s) 206, 317, 585, 923, 935, 1241, 1422
HpyCH4IV ACGT 5 cut(s) 105, 263, 550, 768, 895
HpyCH4V TGCA 8 cut(s) 95, 383, 573, 822, 961, 1319, 1408, 1412
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 164, 234
HpyF3I CTNAG 6 cut(s) 73, 142, 407, 624, 840, 1164
HpySE526I ACGT 5 cut(s) 105, 263, 550, 768, 895
Hsp92I GRCGYC 4 cut(s) 263, 522, 660, 768
Hsp92II CATG 9 cut(s) 95, 342, 505, 709, 826, 910, 1006, 1267, 1412
KspAI GTTAAC 1 cut(s) 667
Kzo9I GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
LmnI GCTCC 5 cut(s) 286, 297, 433, 685, 1006
Lsp1109I GCAGC 2 cut(s) 249, 276
LweI GCATC 4 cut(s) 667, 794, 1306, 1371
MaeI CTAG 2 cut(s) 782, 881
MaeII ACGT 5 cut(s) 105, 263, 550, 768, 895
MaeIII GTNAC 3 cut(s) 106, 883, 1241
MalI GATC 6 cut(s) 29, 251, 778, 813, 1176, 1360
MboI GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
MboII GAAGA 5 cut(s) 271, 398, 593, 1214, 1353
MflI RGATCY 2 cut(s) 811, 1358
MhlI GDGCHC 3 cut(s) 430, 942, 1310
MlsI TGGCCA 1 cut(s) 701
MluCI AATT 9 cut(s) 267, 605, 717, 817, 1014, 1045, 1143, 1283, 1320
MluNI TGGCCA 1 cut(s) 701
MlyI GAGTC 3 cut(s) 200, 351, 830
MmeI TCCRAC 1 cut(s) 990
Mox20I TGGCCA 1 cut(s) 701
Mph1103I ATGCAT 1 cut(s) 1410
MroXI GAANNNNTTC 1 cut(s) 540
MscI TGGCCA 1 cut(s) 701
MseI TTAA 5 cut(s) 270, 282, 306, 666, 1287
MslI CAYNNNNRTG 1 cut(s) 506
Msp20I TGGCCA 1 cut(s) 701
MspA1I CMGCKG 1 cut(s) 1107
MspCI CTTAAG 1 cut(s) 305
MspI CCGG 1 cut(s) 528
MspR9I CCNGG 2 cut(s) 528, 564
MvaI CCWGG 1 cut(s) 564
MvnI CGCG 1 cut(s) 775
MwoI GCNNNNNNNGC 3 cut(s) 96, 164, 234
NciI CCSGG 1 cut(s) 528
NcoI CCATGG 1 cut(s) 1002
NdeI CATATG 1 cut(s) 696
NdeII GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
NlaIII CATG 9 cut(s) 95, 342, 505, 709, 826, 910, 1006, 1267, 1412
NlaIV GGNNCC 3 cut(s) 813, 877, 941
NmeAIII GCCGAG 1 cut(s) 771
NmuCI GTSAC 3 cut(s) 106, 883, 1241
NruI TCGCGA 1 cut(s) 775
NsiI ATGCAT 1 cut(s) 1410
NspI RCATGY 3 cut(s) 342, 709, 1412
PaeI GCATGC 1 cut(s) 1412
PceI AGGCCT 2 cut(s) 99, 540
PciI ACATGT 2 cut(s) 338, 705
PcsI WCGNNNNNNNCGW 4 cut(s) 111, 210, 615, 666
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 2 cut(s) 997, 1300
PflMI CCANNNNNTGG 2 cut(s) 907, 1375
PkrI GCNGC 5 cut(s) 42, 239, 291, 330, 333
PleI GAGTC 3 cut(s) 199, 351, 830
PpsI GAGTC 3 cut(s) 199, 351, 830
Ppu21I YACGTR 1 cut(s) 896
PscI ACATGT 2 cut(s) 338, 705
PsiI TTATAA 2 cut(s) 347, 414
Psp124BI GAGCTC 1 cut(s) 1310
Psp6I CCWGG 1 cut(s) 562
PspGI CCWGG 1 cut(s) 562
PspN4I GGNNCC 3 cut(s) 813, 877, 941
PspPI GGNCC 2 cut(s) 148, 731
PsuI RGATCY 2 cut(s) 811, 1358
RruI TCGCGA 1 cut(s) 775
RsaI GTAC 3 cut(s) 898, 920, 1037
RsaNI GTAC 3 cut(s) 897, 919, 1036
RseI CAYNNNNRTG 1 cut(s) 506
SacI GAGCTC 1 cut(s) 1310
SaqAI TTAA 5 cut(s) 270, 282, 306, 666, 1287
SatI GCNGC 5 cut(s) 41, 238, 290, 329, 332
Sau3AI GATC 6 cut(s) 27, 249, 776, 811, 1174, 1358
Sau96I GGNCC 2 cut(s) 148, 731
SchI GAGTC 3 cut(s) 200, 351, 830
ScrFI CCNGG 2 cut(s) 528, 564
SduI GDGCHC 3 cut(s) 430, 942, 1310
SfaNI GCATC 4 cut(s) 667, 794, 1306, 1371
SinI GGWCC 1 cut(s) 148
SmiMI CAYNNNNRTG 1 cut(s) 506
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
SphI GCATGC 1 cut(s) 1412
Sse9I AATT 9 cut(s) 267, 605, 717, 817, 1014, 1045, 1143, 1283, 1320
SseBI AGGCCT 2 cut(s) 99, 540
SsiI CCGC 9 cut(s) 41, 124, 139, 146, 165, 329, 332, 795, 1107
SspMI CTAG 2 cut(s) 782, 881
SstI GAGCTC 1 cut(s) 1310
StuI AGGCCT 2 cut(s) 99, 540
StyD4I CCNGG 2 cut(s) 526, 562
StyI CCWWGG 1 cut(s) 1002
TaaI ACNGT 7 cut(s) 206, 317, 585, 923, 935, 1241, 1422
TaiI ACGT 5 cut(s) 108, 266, 553, 771, 898
TaqI TCGA 7 cut(s) 189, 468, 587, 657, 675, 834, 1225
TasI AATT 9 cut(s) 267, 605, 717, 817, 1014, 1045, 1143, 1283, 1320
TauI GCSGC 3 cut(s) 43, 331, 334
TfiI GAWTC 2 cut(s) 997, 1300
Tru1I TTAA 5 cut(s) 270, 282, 306, 666, 1287
Tru9I TTAA 5 cut(s) 270, 282, 306, 666, 1287
TscAI CASTG 3 cut(s) 523, 940, 1089
TseFI GTSAC 3 cut(s) 106, 883, 1241
TseI GCWGC 2 cut(s) 237, 289
Tsp45I GTSAC 3 cut(s) 106, 883, 1241
TspDTI ATGAA 1 cut(s) 518
TspGWI ACGGA 1 cut(s) 672
TspRI CASTG 3 cut(s) 523, 940, 1089
Van91I CCANNNNNTGG 2 cut(s) 907, 1375
Vha464I CTTAAG 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 148
XapI RAATTY 3 cut(s) 717, 1143, 1283
XceI RCATGY 3 cut(s) 342, 709, 1412
XmnI GAANNNNTTC 1 cut(s) 540
XspI CTAG 2 cut(s) 782, 881
ZraI GACGTC 2 cut(s) 264, 769
Zsp2I ATGCAT 1 cut(s) 1410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.