RchiOBHm_Chr3g0464331

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000638
Physical Location & Seq
Forward (+)
11460293 .. 11463806
3514 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43061

Sequence Viewer

Length: 1419 bp
ATGGAGATGCAGATGGAGCTCCGGCCACAACCACACGTACTACTATTGCCCTTCCCAGCACAAGGCCACATCAAGCCCATGCTAGCCTTGGCGCAGCTTCTCTGCCACGCCGGCATCCACGTCACCTTCCTCAACACCGAGCATAACCACCGCCAGCTCACCCAACGCCAAGCCCTCTCCGCCCGATTCCCTACTCTCCACTTCCGCTCCATCTCCGACGGCCTCCCCTCCGATCATCCACGCTCCATTTCCCCTAATCTCATGGACATAGTCTCGTCCCTGAGGTCCAAAACGGCGCCGCTCCTGCATCAACTCCTGGTCTCCCTCATGAGCAAAAACGACGTCGGCTCTGCCGCTCAGCTGCCTTCTTTGGGCTGTGTGATAACAGACGGGATCATGTGTTTCGCAATTGAAGCGGCGGAGGAGGTCGGAATTCCCGTAATTGCCCTCCGCACCACCAGCGCTTGCAGCTTCTGGTGTTACTCATGCATCCCCAAGCTAATTGAAGAAGCTCAGCTGCCTTTTGGAGATGAAGATATGGATAAGATGGTGAGCGGCATTCCCGGGATGGAATGCCTTTTACGACGAAGAGACCTACCGAGTATTTGCAGAGTACCAACGGACCACCCGGTTATCCAGTTTTTCGTGGAAGAGACCAGAGCCATAACTCGAGCTTCTAGTCTCATACTCAACACCTTTGACGACCTCGAATCCTCAATTCTCTCCCACATTGCCTCTCGATTTTCAAAAATTTACACCATCGGACCATTGCATGCTCTCCTCAAATCTCGTGTCGTGGACGACAACCTATCTTCCTCTTTGCGCCAAGAAGACCGTGGTTGCATGATGTGGTTGGACTCCCAAAGGGTTGGGTCTGTTATTTTCGTTAGCTTCGGGAGTCTGGTGAAACTAACACGTGTTCAATTACTAGAATTTTGGCACGGATTGGTTAATAGTGGGTCCCCTTTTCTATGGGTCATCCGCTCAGATGTGCTATGGAGTGATGAAGCAGAGCAAGCGAGTCACGTAACCCCGGCGGAGGTTATAGTGGATTGGGCCCCGCAAGAAGAGGTCCTGGCCCATGAAGCTGTGGGTGGGTTTCTGACCCATAGCGGGTGGAATTCGACACTGGAGGCAATTTGGGCCGGAGTCCCAATGCTTTGCTGGCCCCAACTAGCAGACCAGCAGGTGAATAGTAGATGGGTTGGAGAGGTTTGGAAGATTGGGGTTGATATGAAAGACACGTGTGATAGATCGACTGTCGAGAAGATGATCAAAGCCTTGATGAAAGGTGAAGATAAAGAGGTGATTTCCAGGTCGGTGGATCATTTTGCAAAATTGGCGCGGACTTCTGTTAGTAAAAATGGCTCTTCATACCTTAATCTGGAGAAACTTATTCAAGACTTGAGAAATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

472

Amino Acids

52.68

Weight (kDa)

5.94

Isoelectric Point (pI)

51.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 71 4.8e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 273 - 435 1e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1177
AatII GACGTC 1 cut(s) 345
Acc36I ACCTGC 1 cut(s) 1177
AccB1I GGYRCC 1 cut(s) 295
AccBSI CCGCTC 5 cut(s) 207, 301, 356, 555, 984
AccII CGCG 1 cut(s) 1345
AclWI GGATC 2 cut(s) 401, 1332
AcoI YGGCCR 1 cut(s) 23
AcsI RAATTY 5 cut(s) 432, 750, 932, 1120, 1411
AcvI CACGTG 2 cut(s) 917, 1245
AcyI GRCGYC 2 cut(s) 296, 342
AfaI GTAC 2 cut(s) 39, 615
AfeI AGCGCT 1 cut(s) 463
AfiI CCNNNNNNNGG 5 cut(s) 62, 371, 1039, 1113, 1384
AflIII ACRYGT 5 cut(s) 34, 914, 916, 1242, 1244
AgsI TTSAA 5 cut(s) 413, 506, 747, 923, 1400
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 3 cut(s) 315, 1074, 1313
Alw21I GWGCWC 1 cut(s) 21
Alw26I GTCTC 5 cut(s) 277, 325, 585, 647, 686
AlwI GGATC 2 cut(s) 401, 1332
AlwNI CAGNNNCTG 1 cut(s) 474
Ama87I CYCGRG 2 cut(s) 563, 669
Aor51HI AGCGCT 1 cut(s) 463
AoxI GGCC 7 cut(s) 23, 64, 220, 1056, 1077, 1143, 1166
ApaI GGGCCC 1 cut(s) 1060
ApeKI GCWGC 4 cut(s) 94, 361, 468, 517
ApoI RAATTY 5 cut(s) 432, 750, 932, 1120, 1411
ArsI GACNNNNNNTTYG 4 cut(s) 327, 359, 777, 809
AspLEI GCGC 5 cut(s) 94, 298, 464, 825, 1345
AsuC2I CCSGG 4 cut(s) 564, 565, 629, 1034
AsuHPI GGTGA 7 cut(s) 115, 151, 562, 916, 1201, 1304, 1318
AsuNHI GCTAGC 1 cut(s) 82
AvaI CYCGRG 2 cut(s) 563, 669
AvaII GGWCC 5 cut(s) 285, 622, 764, 960, 1072
AxyI CCTNAGG 1 cut(s) 281
BaeGI GKGCMC 1 cut(s) 1060
BanI GGYRCC 1 cut(s) 295
BanII GRGCYC 2 cut(s) 21, 1060
BauI CACGAG 1 cut(s) 789
BbrPI CACGTG 2 cut(s) 917, 1245
BbsI GAAGAC 1 cut(s) 837
Bbv12I GWGCWC 1 cut(s) 21
BbvI GCAGC 4 cut(s) 106, 348, 480, 504
BccI CCATC 6 cut(s) 7, 218, 541, 562, 767, 1194
BceAI ACGGC 2 cut(s) 235, 309
BciT130I CCWGG 3 cut(s) 317, 1076, 1315
BclI TGATCA 1 cut(s) 1272
BcnI CCSGG 4 cut(s) 564, 565, 629, 1034
BcoDI GTCTC 5 cut(s) 277, 325, 585, 647, 686
BfaI CTAG 4 cut(s) 83, 678, 929, 1175
BfoI RGCGCY 2 cut(s) 299, 465
BfuAI ACCTGC 1 cut(s) 1177
BglI GCCNNNNNGGC 1 cut(s) 111
BisI GCNGC 8 cut(s) 95, 299, 354, 362, 417, 469, 518, 556
BlpI GCTNAGC 2 cut(s) 357, 513
BlsI GCNGC 8 cut(s) 96, 300, 355, 363, 418, 470, 519, 557
Bme1390I CCNGG 7 cut(s) 317, 564, 565, 629, 1034, 1076, 1315
Bme18I GGWCC 5 cut(s) 285, 622, 764, 960, 1072
BmeT110I CYCGRG 2 cut(s) 563, 669
BmgBI CACGTC 1 cut(s) 121
BmiI GGNNCC 6 cut(s) 297, 961, 962, 1058, 1059, 1169
BmrFI CCNGG 7 cut(s) 317, 564, 565, 629, 1034, 1076, 1315
BmsI GCATC 3 cut(s) 123, 316, 498
BmtI GCTAGC 1 cut(s) 86
BpiI GAAGAC 1 cut(s) 837
BpmI CTGGAG 2 cut(s) 1151, 1406
Bpu1102I GCTNAGC 2 cut(s) 357, 513
BpuMI CCSGG 4 cut(s) 564, 565, 629, 1034
BsaAI YACGTR 4 cut(s) 37, 917, 1027, 1245
BsaHI GRCGYC 2 cut(s) 296, 342
BsaI GGTCTC 3 cut(s) 325, 585, 647
BsaJI CCNNGG 4 cut(s) 87, 563, 835, 1032
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 371, 1039, 1113, 1384
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 2 cut(s) 637, 1134
Bse21I CCTNAGG 1 cut(s) 281
Bse3DI GCAATG 2 cut(s) 729, 767
BseBI CCWGG 3 cut(s) 317, 1076, 1315
BseDI CCNNGG 4 cut(s) 87, 563, 835, 1032
BseGI GGATG 5 cut(s) 114, 235, 489, 573, 978
BseLI CCNNNNNNNGG 5 cut(s) 62, 371, 1039, 1113, 1384
BseMI GCAATG 2 cut(s) 729, 767
BseMII CTCAG 4 cut(s) 272, 371, 527, 999
BseNI ACTGG 2 cut(s) 637, 1134
BseRI GAGGAG 2 cut(s) 437, 770
BseSI GKGCMC 1 cut(s) 1060
BseXI GCAGC 4 cut(s) 106, 348, 480, 504
BseYI CCCAGC 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 1345
BshFI GGCC 7 cut(s) 25, 66, 222, 1058, 1079, 1145, 1168
BshNI GGYRCC 1 cut(s) 295
BsiHKAI GWGCWC 1 cut(s) 21
BsiHKCI CYCGRG 2 cut(s) 563, 669
BsiSI CCGG 6 cut(s) 22, 111, 564, 629, 1034, 1146
BslFI GGGAC 3 cut(s) 262, 946, 1136
BslI CCNNNNNNNGG 5 cut(s) 62, 371, 1039, 1113, 1384
BsmAI GTCTC 5 cut(s) 277, 325, 585, 647, 686
BsmFI GGGAC 3 cut(s) 262, 946, 1136
BsmI GAATGC 2 cut(s) 558, 578
BsnI GGCC 7 cut(s) 25, 66, 222, 1058, 1079, 1145, 1168
Bso31I GGTCTC 3 cut(s) 325, 585, 647
BsoBI CYCGRG 2 cut(s) 563, 669
Bsp120I GGGCCC 1 cut(s) 1056
Bsp1286I GDGCHC 2 cut(s) 21, 1060
Bsp143I GATC 5 cut(s) 232, 393, 1253, 1272, 1324
Bsp1720I GCTNAGC 2 cut(s) 357, 513
BspANI GGCC 7 cut(s) 25, 66, 222, 1058, 1079, 1145, 1168
BspCNI CTCAG 4 cut(s) 273, 370, 526, 998
BspFNI CGCG 1 cut(s) 1345
BspHI TCATGA 1 cut(s) 327
BspLI GGNNCC 6 cut(s) 297, 961, 962, 1058, 1059, 1169
BspMI ACCTGC 1 cut(s) 1177
BspOI GCTAGC 1 cut(s) 86
BspPI GGATC 2 cut(s) 401, 1332
BspQI GCTCTTC 1 cut(s) 1375
BspT107I GGYRCC 1 cut(s) 295
BspTNI GGTCTC 3 cut(s) 325, 585, 647
BsrBI CCGCTC 5 cut(s) 207, 301, 356, 555, 984
BsrDI GCAATG 2 cut(s) 729, 767
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 2 cut(s) 637, 1134
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 4 cut(s) 87, 563, 835, 1032
BssMI GATC 5 cut(s) 232, 393, 1253, 1272, 1324
BssNI GRCGYC 2 cut(s) 296, 342
BssSI CACGAG 1 cut(s) 789
BssT1I CCWWGG 1 cut(s) 87
Bst2BI CACGAG 1 cut(s) 789
Bst2UI CCWGG 3 cut(s) 317, 1076, 1315
Bst4CI ACNGT 2 cut(s) 836, 1261
Bst6I CTCTTC 4 cut(s) 583, 645, 1062, 1375
BstACI GRCGYC 2 cut(s) 296, 342
BstBAI YACGTR 4 cut(s) 37, 917, 1027, 1245
BstC8I GCNNGC 7 cut(s) 84, 112, 155, 466, 774, 1017, 1166
BstDEI CTNAG 4 cut(s) 281, 357, 513, 985
BstDSI CCRYGG 1 cut(s) 835
BstF5I GGATG 5 cut(s) 114, 235, 489, 573, 978
BstFNI CGCG 1 cut(s) 1345
BstH2I RGCGCY 2 cut(s) 299, 465
BstHHI GCGC 5 cut(s) 94, 298, 464, 825, 1345
BstKTI GATC 5 cut(s) 235, 396, 1256, 1275, 1327
BstMAI GTCTC 5 cut(s) 277, 325, 585, 647, 686
BstMBI GATC 5 cut(s) 232, 393, 1253, 1272, 1324
BstNI CCWGG 3 cut(s) 317, 1076, 1315
BstNSI RCATGY 1 cut(s) 776
BstSCI CCNGG 7 cut(s) 315, 562, 563, 627, 1032, 1074, 1313
BstSLI GKGCMC 1 cut(s) 1060
BstUI CGCG 1 cut(s) 1345
BstV1I GCAGC 4 cut(s) 106, 348, 480, 504
BstV2I GAAGAC 1 cut(s) 837
BstXI CCANNNNNNTGG 2 cut(s) 869, 1321
Bsu36I CCTNAGG 1 cut(s) 281
BsuRI GGCC 7 cut(s) 25, 66, 222, 1058, 1079, 1145, 1168
BtgI CCRYGG 1 cut(s) 835
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 5 cut(s) 114, 235, 489, 573, 978
BtsIMutI CAGTG 1 cut(s) 1127
BveI ACCTGC 1 cut(s) 1177
Cac8I GCNNGC 7 cut(s) 84, 112, 155, 466, 774, 1017, 1166
CaiI CAGNNNCTG 1 cut(s) 474
CciI TCATGA 1 cut(s) 327
CfoI GCGC 5 cut(s) 94, 298, 464, 825, 1345
Cfr10I RCCGGY 1 cut(s) 110
Cfr9I CCCGGG 1 cut(s) 563
Csp6I GTAC 2 cut(s) 38, 614
CviAII CATG 8 cut(s) 79, 262, 328, 397, 486, 773, 844, 1082
CviQI GTAC 2 cut(s) 38, 614
DdeI CTNAG 4 cut(s) 281, 357, 513, 985
DinI GGCGCC 1 cut(s) 297
DpnI GATC 5 cut(s) 234, 395, 1255, 1274, 1326
DpnII GATC 5 cut(s) 232, 393, 1253, 1272, 1324
EaeI YGGCCR 1 cut(s) 23
Eam1104I CTCTTC 4 cut(s) 583, 645, 1062, 1375
EarI CTCTTC 4 cut(s) 583, 645, 1062, 1375
EciI GGCGGA 3 cut(s) 169, 434, 1052
Ecl136II GAGCTC 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 87
Eco24I GRGCYC 2 cut(s) 21, 1060
Eco31I GGTCTC 3 cut(s) 325, 585, 647
Eco47I GGWCC 5 cut(s) 285, 622, 764, 960, 1072
Eco47III AGCGCT 1 cut(s) 463
Eco53kI GAGCTC 1 cut(s) 19
Eco72I CACGTG 2 cut(s) 917, 1245
Eco81I CCTNAGG 1 cut(s) 281
Eco88I CYCGRG 2 cut(s) 563, 669
EcoICRI GAGCTC 1 cut(s) 19
EcoO109I RGGNCCY 3 cut(s) 960, 1057, 1072
EcoRI GAATTC 2 cut(s) 432, 1120
EcoRII CCWGG 3 cut(s) 315, 1074, 1313
EcoT14I CCWWGG 1 cut(s) 87
EcoT22I ATGCAT 1 cut(s) 491
EcoT38I GRGCYC 2 cut(s) 21, 1060
EgeI GGCGCC 1 cut(s) 297
EheI GGCGCC 1 cut(s) 297
ErhI CCWWGG 1 cut(s) 87
FaeI CATG 8 cut(s) 82, 265, 331, 400, 489, 776, 847, 1085
FaqI GGGAC 3 cut(s) 262, 946, 1136
FatI CATG 8 cut(s) 78, 261, 327, 396, 485, 772, 843, 1081
FauI CCCGC 2 cut(s) 1068, 1106
FbaI TGATCA 1 cut(s) 1272
Fnu4HI GCNGC 8 cut(s) 95, 299, 354, 362, 417, 469, 518, 556
FokI GGATG 5 cut(s) 101, 222, 476, 580, 965
FriOI GRGCYC 2 cut(s) 21, 1060
Fsp4HI GCNGC 8 cut(s) 95, 299, 354, 362, 417, 469, 518, 556
FspBI CTAG 4 cut(s) 83, 678, 929, 1175
GlaI GCGC 5 cut(s) 93, 297, 463, 824, 1344
GluI GCNGC 8 cut(s) 95, 299, 354, 362, 417, 469, 518, 556
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 2 cut(s) 1151, 1406
HaeII RGCGCY 2 cut(s) 299, 465
HaeIII GGCC 7 cut(s) 25, 66, 222, 1058, 1079, 1145, 1168
HapII CCGG 6 cut(s) 22, 111, 564, 629, 1034, 1146
HhaI GCGC 5 cut(s) 94, 298, 464, 825, 1345
Hin1I GRCGYC 2 cut(s) 296, 342
Hin1II CATG 8 cut(s) 82, 265, 331, 400, 489, 776, 847, 1085
Hin6I GCGC 5 cut(s) 92, 296, 462, 823, 1343
HinP1I GCGC 5 cut(s) 92, 296, 462, 823, 1343
HinfI GANTC 6 cut(s) 186, 710, 857, 898, 1021, 1149
HpaII CCGG 6 cut(s) 22, 111, 564, 629, 1034, 1146
HphI GGTGA 7 cut(s) 115, 151, 562, 916, 1201, 1304, 1318
Hpy166II GTNNAC 1 cut(s) 799
Hpy188I TCNGA 6 cut(s) 217, 232, 431, 764, 988, 1104
Hpy188III TCNNGA 6 cut(s) 328, 738, 895, 1264, 1385, 1400
Hpy8I GTNNAC 1 cut(s) 799
Hpy99I CGWCG 4 cut(s) 221, 344, 347, 588
HpyAV CCTTC 3 cut(s) 61, 136, 375
HpyCH4III ACNGT 2 cut(s) 836, 1261
HpyCH4IV ACGT 6 cut(s) 36, 120, 342, 916, 1026, 1244
HpyCH4V TGCA 8 cut(s) 10, 307, 468, 489, 609, 772, 843, 1334
HpyF3I CTNAG 4 cut(s) 281, 357, 513, 985
HpySE526I ACGT 6 cut(s) 36, 120, 342, 916, 1026, 1244
Hsp92I GRCGYC 2 cut(s) 296, 342
Hsp92II CATG 8 cut(s) 82, 265, 331, 400, 489, 776, 847, 1085
HspAI GCGC 5 cut(s) 92, 296, 462, 823, 1343
KasI GGCGCC 1 cut(s) 295
KflI GGGWCCC 1 cut(s) 960
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 1272
Kzo9I GATC 5 cut(s) 232, 393, 1253, 1272, 1324
LguI GCTCTTC 1 cut(s) 1375
LmnI GCTCC 5 cut(s) 16, 24, 212, 248, 306
Lsp1109I GCAGC 4 cut(s) 106, 348, 480, 504
LweI GCATC 3 cut(s) 123, 316, 498
MaeI CTAG 4 cut(s) 83, 678, 929, 1175
MaeII ACGT 6 cut(s) 36, 120, 342, 916, 1026, 1244
MaeIII GTNAC 4 cut(s) 121, 479, 1022, 1027
MalI GATC 5 cut(s) 234, 395, 1255, 1274, 1326
MbiI CCGCTC 5 cut(s) 207, 301, 356, 555, 984
MboI GATC 5 cut(s) 232, 393, 1253, 1272, 1324
MfeI CAATTG 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 21, 1060
Mly113I GGCGCC 1 cut(s) 296
MlyI GAGTC 4 cut(s) 851, 907, 1030, 1158
MmeI TCCRAC 4 cut(s) 240, 409, 834, 1186
Mph1103I ATGCAT 1 cut(s) 491
MroNI GCCGGC 1 cut(s) 110
MseI TTAA 2 cut(s) 951, 1380
MspA1I CMGCKG 2 cut(s) 361, 517
MspI CCGG 6 cut(s) 22, 111, 564, 629, 1034, 1146
MspR9I CCNGG 7 cut(s) 317, 564, 565, 629, 1034, 1076, 1315
MunI CAATTG 1 cut(s) 408
Mva1269I GAATGC 2 cut(s) 558, 578
MvaI CCWGG 3 cut(s) 317, 1076, 1315
MvnI CGCG 1 cut(s) 1345
NaeI GCCGGC 1 cut(s) 112
NarI GGCGCC 1 cut(s) 296
NciI CCSGG 4 cut(s) 564, 565, 629, 1034
NdeII GATC 5 cut(s) 232, 393, 1253, 1272, 1324
NgoMIV GCCGGC 1 cut(s) 110
NheI GCTAGC 1 cut(s) 82
NlaIII CATG 8 cut(s) 82, 265, 331, 400, 489, 776, 847, 1085
NlaIV GGNNCC 6 cut(s) 297, 961, 962, 1058, 1059, 1169
NmuCI GTSAC 2 cut(s) 121, 1022
NsiI ATGCAT 1 cut(s) 491
NspI RCATGY 1 cut(s) 776
PaeI GCATGC 1 cut(s) 776
PaeR7I CTCGAG 1 cut(s) 669
PagI TCATGA 1 cut(s) 327
PaqCI CACCTGC 1 cut(s) 1177
PciSI GCTCTTC 1 cut(s) 1375
PcsI WCGNNNNNNNCGW 1 cut(s) 435
PctI GAATGC 2 cut(s) 558, 578
PdiI GCCGGC 1 cut(s) 112
PfeI GAWTC 2 cut(s) 186, 710
PflFI GACNNNGTC 1 cut(s) 269
PkrI GCNGC 8 cut(s) 96, 300, 355, 363, 418, 470, 519, 557
PleI GAGTC 4 cut(s) 851, 906, 1029, 1157
PluTI GGCGCC 1 cut(s) 299
PmaCI CACGTG 2 cut(s) 917, 1245
PmlI CACGTG 2 cut(s) 917, 1245
PpsI GAGTC 4 cut(s) 851, 906, 1029, 1157
Ppu21I YACGTR 4 cut(s) 37, 917, 1027, 1245
PpuMI RGGWCCY 2 cut(s) 960, 1072
Psp124BI GAGCTC 1 cut(s) 21
Psp5II RGGWCCY 2 cut(s) 960, 1072
Psp6I CCWGG 3 cut(s) 315, 1074, 1313
PspCI CACGTG 2 cut(s) 917, 1245
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 3 cut(s) 315, 1074, 1313
PspN4I GGNNCC 6 cut(s) 297, 961, 962, 1058, 1059, 1169
PspOMI GGGCCC 1 cut(s) 1056
PspPPI RGGWCCY 2 cut(s) 960, 1072
PspXI VCTCGAGB 1 cut(s) 669
PstNI CAGNNNCTG 1 cut(s) 474
PsyI GACNNNGTC 1 cut(s) 269
PvuII CAGCTG 2 cut(s) 361, 517
RsaI GTAC 2 cut(s) 39, 615
RsaNI GTAC 2 cut(s) 38, 614
SacI GAGCTC 1 cut(s) 21
SapI GCTCTTC 1 cut(s) 1375
SaqAI TTAA 2 cut(s) 951, 1380
SatI GCNGC 8 cut(s) 95, 299, 354, 362, 417, 469, 518, 556
Sau3AI GATC 5 cut(s) 232, 393, 1253, 1272, 1324
SchI GAGTC 4 cut(s) 851, 907, 1030, 1158
ScrFI CCNGG 7 cut(s) 317, 564, 565, 629, 1034, 1076, 1315
SduI GDGCHC 2 cut(s) 21, 1060
SfaNI GCATC 3 cut(s) 123, 316, 498
SfoI GGCGCC 1 cut(s) 297
Sfr274I CTCGAG 1 cut(s) 669
SinI GGWCC 5 cut(s) 285, 622, 764, 960, 1072
SlaI CTCGAG 1 cut(s) 669
SmaI CCCGGG 1 cut(s) 565
SmlI CTYRAG 2 cut(s) 669, 1405
SmoI CTYRAG 2 cut(s) 669, 1405
SphI GCATGC 1 cut(s) 776
SspDI GGCGCC 1 cut(s) 295
SspMI CTAG 4 cut(s) 83, 678, 929, 1175
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 7 cut(s) 315, 562, 563, 627, 1032, 1074, 1313
StyI CCWWGG 1 cut(s) 87
TaaI ACNGT 2 cut(s) 836, 1261
TaiI ACGT 6 cut(s) 39, 123, 345, 919, 1029, 1247
TaqI TCGA 6 cut(s) 670, 708, 739, 1124, 1256, 1263
TauI GCSGC 4 cut(s) 301, 356, 419, 558
TfiI GAWTC 2 cut(s) 186, 710
Tru1I TTAA 2 cut(s) 951, 1380
Tru9I TTAA 2 cut(s) 951, 1380
TscAI CASTG 1 cut(s) 1134
TseFI GTSAC 2 cut(s) 121, 1022
TseI GCWGC 4 cut(s) 94, 361, 468, 517
Tsp45I GTSAC 2 cut(s) 121, 1022
TspDTI ATGAA 6 cut(s) 546, 1020, 1098, 1250, 1301, 1362
TspGWI ACGGA 2 cut(s) 635, 957
TspMI CCCGGG 1 cut(s) 563
TspRI CASTG 1 cut(s) 1134
Tth111I GACNNNGTC 1 cut(s) 269
VpaK11BI GGWCC 5 cut(s) 285, 622, 764, 960, 1072
XapI RAATTY 5 cut(s) 432, 750, 932, 1120, 1411
XceI RCATGY 1 cut(s) 776
XcmI CCANNNNNNNNNTGG 3 cut(s) 85, 833, 1161
XhoI CTCGAG 1 cut(s) 669
XmaI CCCGGG 1 cut(s) 563
XspI CTAG 4 cut(s) 83, 678, 929, 1175
ZraI GACGTC 1 cut(s) 343
Zsp2I ATGCAT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.