Rroxscaffold_6G00415740

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000638
Physical Location & Seq
Reverse (-)
37894293 .. 37896603
2311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00415740.1

Sequence Viewer

Length: 1383 bp
ATGCTAGCCTTGGCACAGCTGCTCTGCCACTCCGGCATCCACGTCACCTTCCTCAACACCGAGCACAACCACCGCCAACTCACCCAACGCCAAGCCCTCTCCGCCCGATTCCCTACTCTCCACTTCCACTCCATCTCCGACGGCCTCCCTTCCGATCATCCACGCTCCGTTTCCTCTAATTACATGGACATAATCACGTCCTTGAGGTCCAAAACGGGGCCGCTCCTGCATCAACTCCTGGTCTCCCTCATGAGCAAAAACGACGTCGACGACTCCGTAGCTCAGCTGCCTCCTTTGGGTTGTGTGATAACGGACGGGATCATGTCTTTCGCAATTGATGCGGCAGAGGAGCTGCGAATTCCCGTCATTGCCCTCCGCTTTATCAGCGCTGCAAGCTTCTTGTGTAACTTATGCATCCCCAAGCTTATTGAAGAAGCTCAACTGCCTTTTGGAGATGAAGACATGAATAAGACTGTGAGCGGCATTCCCGAGATGGAACGCCTTTTGCGACGGAGAGATCTACCGGGTTTTTGTAGAGTTCCAACCGACCACCCGATGATCCAGTTTTTCATGGAAGAGACTATAGCCATGACTCGAGCTTCTAGTCTCATACTCAACACCTTCGATGACCTTGAATCCTCAGTTCTCTCCCACATCGCCTCTCTGTTTTCAAAAATTTACACCATTGGACCATTGCATGCTCTCCTCAAATCCCGTGTCGTGGATGACAACCTATCTTCCTCCTCCGCCGCCTCTTTGCGCCAAGAAGACCGTCGTTGCATGATGTGGCTGGACTCCCAAAGAGTTGCGTCTGTCATTTTTGTTAGCTTTGGGAGCTTGGTGAAGCTAACACGTGTTCAATTACTAGAGTTTTGGCACGGTTTGGCTAATAGTGGGTTCCCTTTTTTATGGGTCATCCGCTCGGATGTGCTATGGAGTGATGAAGCAGAGCAGCCGAGTCACGTGATCCCGATGGAGTTGGAGACGGCTACAAAAGAAAGGGGGTTTACAGTGGATTGGGCCCCACAAGAAGAGGTTCTGGCCCATGAAGCTGTGGGTGGGTTTTTAACCCATAGCGGGTGGAATTCAACACTGGAGGCAATTTGGGCTGGGGTCCCTATGCTTTGCTGGCCCCAAATAGGGGACCAACAGGTGAATAGTAGATGGGTTGGGGAGGTTTGGAAGATTGGGATTGACATGAAGGACACGTGTGATAGATCGACGATCGAGAAGATGATCAAAGCCTTGATGGAAGGTGAAGAAACAGATGTGATTTCAAGGTCGGTGGATCAGTTTGCAAAATTGGCGCGGACTTCTGTCAGTGAAAGTGGCTCTTCGTACCACAACTTGGAAAAACTTATTCAAGACCTAAGAAATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

460

Amino Acids

51.56

Weight (kDa)

5.39

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 221 - 420 4.7e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 267
AccB7I CCANNNNNTGG 1 cut(s) 1348
AccBSI CCGCTC 3 cut(s) 223, 480, 921
AccI GTMKAC 1 cut(s) 267
AccII CGCG 1 cut(s) 1309
AclWI GGATC 4 cut(s) 326, 553, 961, 1296
AcsI RAATTY 4 cut(s) 357, 675, 1084, 1375
AcvI CACGTG 3 cut(s) 854, 964, 1209
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 1 cut(s) 1340
AfeI AGCGCT 1 cut(s) 388
AfiI CCNNNNNNNGG 8 cut(s) 216, 296, 721, 1077, 1139, 1140, 1141, 1348
AflIII ACRYGT 4 cut(s) 851, 853, 1206, 1208
AgsI TTSAA 7 cut(s) 431, 635, 672, 860, 1089, 1278, 1364
AjiI CACGTC 2 cut(s) 43, 198
AjnI CCWGG 1 cut(s) 237
Alw21I GWGCWC 1 cut(s) 66
Alw26I GTCTC 4 cut(s) 247, 572, 611, 977
AlwI GGATC 4 cut(s) 326, 553, 961, 1296
Ama87I CYCGRG 2 cut(s) 488, 594
Aor51HI AGCGCT 1 cut(s) 388
AoxI GGCC 5 cut(s) 142, 218, 1020, 1041, 1130
ApaI GGGCCC 1 cut(s) 1024
ApeKI GCWGC 5 cut(s) 19, 286, 352, 389, 952
ApoI RAATTY 4 cut(s) 357, 675, 1084, 1375
ArsI GACNNNNNNTTYG 4 cut(s) 249, 281, 702, 734
Asp700I GAANNNNTTC 1 cut(s) 1035
AspLEI GCGC 3 cut(s) 389, 762, 1309
AspS9I GGNCC 9 cut(s) 207, 218, 689, 1020, 1021, 1042, 1114, 1131, 1144
AsuC2I CCSGG 1 cut(s) 525
AsuHPI GGTGA 5 cut(s) 37, 73, 853, 1165, 1268
AsuNHI GCTAGC 1 cut(s) 4
AvaI CYCGRG 2 cut(s) 488, 594
AvaII GGWCC 4 cut(s) 207, 689, 1114, 1144
BaeGI GKGCMC 1 cut(s) 1024
BanII GRGCYC 1 cut(s) 1024
BbrPI CACGTG 3 cut(s) 854, 964, 1209
BbsI GAAGAC 2 cut(s) 465, 774
Bbv12I GWGCWC 1 cut(s) 66
BbvI GCAGC 5 cut(s) 6, 273, 339, 376, 964
BccI CCATC 5 cut(s) 140, 487, 967, 1158, 1243
BceAI ACGGC 2 cut(s) 157, 1002
BciT130I CCWGG 1 cut(s) 239
BclI TGATCA 1 cut(s) 1236
BcnI CCSGG 1 cut(s) 525
BcoDI GTCTC 4 cut(s) 247, 572, 611, 977
BfaI CTAG 3 cut(s) 5, 603, 866
BfmI CTRYAG 1 cut(s) 582
BfoI RGCGCY 1 cut(s) 390
BglI GCCNNNNNGGC 1 cut(s) 33
BglII AGATCT 1 cut(s) 517
BisI GCNGC 9 cut(s) 20, 221, 287, 342, 353, 390, 481, 750, 953
BlpI GCTNAGC 1 cut(s) 282
BlsI GCNGC 9 cut(s) 21, 222, 288, 343, 354, 391, 482, 751, 954
Bme1390I CCNGG 2 cut(s) 239, 525
Bme18I GGWCC 4 cut(s) 207, 689, 1114, 1144
BmeT110I CYCGRG 2 cut(s) 488, 594
BmgBI CACGTC 2 cut(s) 43, 198
BmgT120I GGNCC 9 cut(s) 207, 218, 689, 1020, 1021, 1042, 1114, 1131, 1144
BmiI GGNNCC 8 cut(s) 219, 899, 1022, 1023, 1115, 1116, 1133, 1145
BmrFI CCNGG 2 cut(s) 239, 525
BmsI GCATC 4 cut(s) 45, 238, 328, 423
BmtI GCTAGC 1 cut(s) 8
BoxI GACNNNNGTC 1 cut(s) 1316
BpiI GAAGAC 2 cut(s) 465, 774
BpmI CTGGAG 1 cut(s) 1115
Bpu1102I GCTNAGC 1 cut(s) 282
BpuEI CTTGAG 1 cut(s) 223
BpuMI CCSGG 1 cut(s) 525
BsaAI YACGTR 3 cut(s) 854, 964, 1209
BsaHI GRCGYC 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 247
BsaJI CCNNGG 1 cut(s) 9
BsaXI ACNNNNNCTCC 4 cut(s) 113, 119, 143, 149
Bsc4I CCNNNNNNNGG 8 cut(s) 216, 296, 721, 1077, 1139, 1140, 1141, 1348
Bse1I ACTGG 2 cut(s) 562, 1098
Bse3DI GCAATG 2 cut(s) 366, 692
BseBI CCWGG 1 cut(s) 239
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 6 cut(s) 36, 157, 414, 730, 915, 931
BseLI CCNNNNNNNGG 8 cut(s) 216, 296, 721, 1077, 1139, 1140, 1141, 1348
BseMI GCAATG 2 cut(s) 366, 692
BseMII CTCAG 2 cut(s) 296, 654
BseNI ACTGG 2 cut(s) 562, 1098
BseRI GAGGAG 3 cut(s) 362, 695, 733
BseSI GKGCMC 1 cut(s) 1024
BseXI GCAGC 5 cut(s) 6, 273, 339, 376, 964
BseYI CCCAGC 1 cut(s) 1109
Bsh1236I CGCG 1 cut(s) 1309
Bsh1285I CGRYCG 1 cut(s) 1227
BshFI GGCC 5 cut(s) 144, 220, 1022, 1043, 1132
BsiEI CGRYCG 1 cut(s) 1227
BsiHKAI GWGCWC 1 cut(s) 66
BsiHKCI CYCGRG 2 cut(s) 488, 594
BsiSI CCGG 2 cut(s) 33, 524
BslFI GGGAC 2 cut(s) 1100, 1157
BslI CCNNNNNNNGG 8 cut(s) 216, 296, 721, 1077, 1139, 1140, 1141, 1348
BsmAI GTCTC 4 cut(s) 247, 572, 611, 977
BsmBI CGTCTC 1 cut(s) 977
BsmFI GGGAC 2 cut(s) 1100, 1157
BsmI GAATGC 1 cut(s) 483
BsnI GGCC 5 cut(s) 144, 220, 1022, 1043, 1132
Bso31I GGTCTC 1 cut(s) 247
BsoBI CYCGRG 2 cut(s) 488, 594
Bsp120I GGGCCC 1 cut(s) 1020
Bsp1286I GDGCHC 2 cut(s) 66, 1024
Bsp143I GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
Bsp1720I GCTNAGC 1 cut(s) 282
BspANI GGCC 5 cut(s) 144, 220, 1022, 1043, 1132
BspCNI CTCAG 2 cut(s) 295, 653
BspFNI CGCG 1 cut(s) 1309
BspHI TCATGA 1 cut(s) 249
BspLI GGNNCC 8 cut(s) 219, 899, 1022, 1023, 1115, 1116, 1133, 1145
BspOI GCTAGC 1 cut(s) 8
BspPI GGATC 4 cut(s) 326, 553, 961, 1296
BspQI GCTCTTC 1 cut(s) 1339
BspTNI GGTCTC 1 cut(s) 247
BsrBI CCGCTC 3 cut(s) 223, 480, 921
BsrDI GCAATG 2 cut(s) 366, 692
BsrI ACTGG 2 cut(s) 562, 1098
BssECI CCNNGG 1 cut(s) 9
BssMI GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
BssNI GRCGYC 1 cut(s) 264
BssT1I CCWWGG 1 cut(s) 9
Bst2UI CCWGG 1 cut(s) 239
Bst4CI ACNGT 4 cut(s) 475, 773, 881, 1012
Bst6I CTCTTC 3 cut(s) 570, 1026, 1339
BstACI GRCGYC 1 cut(s) 264
BstAPI GCANNNNNTGC 1 cut(s) 338
BstBAI YACGTR 3 cut(s) 854, 964, 1209
BstC8I GCNNGC 4 cut(s) 6, 394, 699, 1130
BstDEI CTNAG 3 cut(s) 282, 640, 1370
BstF5I GGATG 6 cut(s) 36, 157, 414, 730, 915, 931
BstFNI CGCG 1 cut(s) 1309
BstH2I RGCGCY 1 cut(s) 390
BstHHI GCGC 3 cut(s) 389, 762, 1309
BstKTI GATC 9 cut(s) 157, 321, 520, 561, 969, 1220, 1227, 1239, 1291
BstMAI GTCTC 4 cut(s) 247, 572, 611, 977
BstMBI GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
BstMCI CGRYCG 1 cut(s) 1227
BstNI CCWGG 1 cut(s) 239
BstNSI RCATGY 1 cut(s) 701
BstPAI GACNNNNGTC 1 cut(s) 1316
BstSCI CCNGG 2 cut(s) 237, 523
BstSFI CTRYAG 1 cut(s) 582
BstSLI GKGCMC 1 cut(s) 1024
BstUI CGCG 1 cut(s) 1309
BstV1I GCAGC 5 cut(s) 6, 273, 339, 376, 964
BstV2I GAAGAC 2 cut(s) 465, 774
BstX2I RGATCY 1 cut(s) 517
BstYI RGATCY 1 cut(s) 517
BsuRI GGCC 5 cut(s) 144, 220, 1022, 1043, 1132
BtgZI GCGATG 1 cut(s) 640
BtrI CACGTC 2 cut(s) 43, 198
BtsCI GGATG 6 cut(s) 36, 157, 414, 730, 915, 931
BtsIMutI CAGTG 3 cut(s) 1017, 1091, 1327
Cac8I GCNNGC 4 cut(s) 6, 394, 699, 1130
CciI TCATGA 1 cut(s) 249
CfoI GCGC 3 cut(s) 389, 762, 1309
Cfr13I GGNCC 9 cut(s) 207, 218, 689, 1020, 1021, 1042, 1114, 1131, 1144
CseI GACGC 1 cut(s) 798
Csp6I GTAC 1 cut(s) 1339
CspCI CAANNNNNGTGG 2 cut(s) 1266, 1301
CviQI GTAC 1 cut(s) 1339
DdeI CTNAG 3 cut(s) 282, 640, 1370
DpnI GATC 9 cut(s) 156, 320, 519, 560, 968, 1219, 1226, 1238, 1290
DpnII GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
Eam1104I CTCTTC 3 cut(s) 570, 1026, 1339
EarI CTCTTC 3 cut(s) 570, 1026, 1339
EciI GGCGGA 2 cut(s) 91, 736
Eco130I CCWWGG 1 cut(s) 9
Eco24I GRGCYC 1 cut(s) 1024
Eco31I GGTCTC 1 cut(s) 247
Eco47I GGWCC 4 cut(s) 207, 689, 1114, 1144
Eco47III AGCGCT 1 cut(s) 388
Eco72I CACGTG 3 cut(s) 854, 964, 1209
Eco88I CYCGRG 2 cut(s) 488, 594
EcoO109I RGGNCCY 2 cut(s) 1021, 1114
EcoRI GAATTC 2 cut(s) 357, 1084
EcoRII CCWGG 1 cut(s) 237
EcoT14I CCWWGG 1 cut(s) 9
EcoT22I ATGCAT 1 cut(s) 416
EcoT38I GRGCYC 1 cut(s) 1024
ErhI CCWWGG 1 cut(s) 9
Esp3I CGTCTC 1 cut(s) 977
FalI AAGNNNNNCTT 2 cut(s) 1318, 1350
FaqI GGGAC 2 cut(s) 1100, 1157
FauI CCCGC 1 cut(s) 1070
FbaI TGATCA 1 cut(s) 1236
FblI GTMKAC 1 cut(s) 267
Fnu4HI GCNGC 9 cut(s) 20, 221, 287, 342, 353, 390, 481, 750, 953
FokI GGATG 6 cut(s) 23, 144, 401, 737, 902, 938
FriOI GRGCYC 1 cut(s) 1024
Fsp4HI GCNGC 9 cut(s) 20, 221, 287, 342, 353, 390, 481, 750, 953
FspBI CTAG 3 cut(s) 5, 603, 866
GlaI GCGC 3 cut(s) 388, 761, 1308
GluI GCNGC 9 cut(s) 20, 221, 287, 342, 353, 390, 481, 750, 953
GsaI CCCAGC 1 cut(s) 1113
GsuI CTGGAG 1 cut(s) 1115
HaeII RGCGCY 1 cut(s) 390
HaeIII GGCC 5 cut(s) 144, 220, 1022, 1043, 1132
HapII CCGG 2 cut(s) 33, 524
HgaI GACGC 1 cut(s) 798
HhaI GCGC 3 cut(s) 389, 762, 1309
Hin1I GRCGYC 1 cut(s) 264
Hin6I GCGC 3 cut(s) 387, 760, 1307
HinP1I GCGC 3 cut(s) 387, 760, 1307
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HindIII AAGCTT 2 cut(s) 394, 422
HinfI GANTC 6 cut(s) 108, 272, 592, 635, 794, 958
HpaII CCGG 2 cut(s) 33, 524
HphI GGTGA 5 cut(s) 37, 73, 853, 1165, 1268
Hpy166II GTNNAC 2 cut(s) 268, 1008
Hpy188I TCNGA 3 cut(s) 139, 154, 925
Hpy188III TCNNGA 5 cut(s) 250, 488, 970, 1228, 1364
Hpy8I GTNNAC 2 cut(s) 268, 1008
Hpy99I CGWCG 7 cut(s) 143, 266, 269, 272, 513, 777, 1225
HpyAV CCTTC 5 cut(s) 58, 159, 631, 1195, 1247
HpyCH4III ACNGT 4 cut(s) 475, 773, 881, 1012
HpyCH4IV ACGT 6 cut(s) 42, 197, 264, 853, 963, 1208
HpyCH4V TGCA 6 cut(s) 229, 392, 414, 697, 780, 1298
HpyF3I CTNAG 3 cut(s) 282, 640, 1370
HpySE526I ACGT 6 cut(s) 42, 197, 264, 853, 963, 1208
Hsp92I GRCGYC 1 cut(s) 264
HspAI GCGC 3 cut(s) 387, 760, 1307
KflI GGGWCCC 1 cut(s) 1114
Ksp22I TGATCA 1 cut(s) 1236
Kzo9I GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
LguI GCTCTTC 1 cut(s) 1339
LmnI GCTCC 4 cut(s) 170, 228, 349, 834
Lsp1109I GCAGC 5 cut(s) 6, 273, 339, 376, 964
LweI GCATC 4 cut(s) 45, 238, 328, 423
MaeI CTAG 3 cut(s) 5, 603, 866
MaeII ACGT 6 cut(s) 42, 197, 264, 853, 963, 1208
MaeIII GTNAC 3 cut(s) 43, 404, 959
MalI GATC 9 cut(s) 156, 320, 519, 560, 968, 1219, 1226, 1238, 1290
MbiI CCGCTC 3 cut(s) 223, 480, 921
MboI GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
MfeI CAATTG 1 cut(s) 333
MflI RGATCY 1 cut(s) 517
MhlI GDGCHC 2 cut(s) 66, 1024
MluCI AATT 9 cut(s) 178, 333, 357, 675, 860, 1084, 1101, 1301, 1375
MlyI GAGTC 4 cut(s) 266, 586, 788, 967
MmeI TCCRAC 3 cut(s) 162, 566, 960
Mph1103I ATGCAT 1 cut(s) 416
MroXI GAANNNNTTC 1 cut(s) 1035
MseI TTAA 1 cut(s) 1067
MspA1I CMGCKG 2 cut(s) 19, 286
MspI CCGG 2 cut(s) 33, 524
MspR9I CCNGG 2 cut(s) 239, 525
MunI CAATTG 1 cut(s) 333
Mva1269I GAATGC 1 cut(s) 483
MvaI CCWGG 1 cut(s) 239
MvnI CGCG 1 cut(s) 1309
NciI CCSGG 1 cut(s) 525
NdeII GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
NheI GCTAGC 1 cut(s) 4
NlaIV GGNNCC 8 cut(s) 219, 899, 1022, 1023, 1115, 1116, 1133, 1145
NmeAIII GCCGAG 1 cut(s) 981
NmuCI GTSAC 2 cut(s) 43, 959
NsiI ATGCAT 1 cut(s) 416
NspI RCATGY 1 cut(s) 701
PaeI GCATGC 1 cut(s) 701
PaeR7I CTCGAG 1 cut(s) 594
PagI TCATGA 1 cut(s) 249
PciSI GCTCTTC 1 cut(s) 1339
PcsI WCGNNNNNNNCGW 3 cut(s) 267, 273, 505
PctI GAATGC 1 cut(s) 483
PdmI GAANNNNTTC 1 cut(s) 1035
PfeI GAWTC 2 cut(s) 108, 635
PflMI CCANNNNNTGG 1 cut(s) 1348
PkrI GCNGC 9 cut(s) 21, 222, 288, 343, 354, 391, 482, 751, 954
Ple19I CGATCG 1 cut(s) 1227
PleI GAGTC 4 cut(s) 266, 586, 788, 966
PmaCI CACGTG 3 cut(s) 854, 964, 1209
PmlI CACGTG 3 cut(s) 854, 964, 1209
PpsI GAGTC 4 cut(s) 266, 586, 788, 966
Ppu21I YACGTR 3 cut(s) 854, 964, 1209
PpuMI RGGWCCY 1 cut(s) 1114
PshAI GACNNNNGTC 1 cut(s) 1316
Psp5II RGGWCCY 1 cut(s) 1114
Psp6I CCWGG 1 cut(s) 237
PspCI CACGTG 3 cut(s) 854, 964, 1209
PspFI CCCAGC 1 cut(s) 1109
PspGI CCWGG 1 cut(s) 237
PspN4I GGNNCC 8 cut(s) 219, 899, 1022, 1023, 1115, 1116, 1133, 1145
PspOMI GGGCCC 1 cut(s) 1020
PspPI GGNCC 9 cut(s) 207, 218, 689, 1020, 1021, 1042, 1114, 1131, 1144
PspPPI RGGWCCY 1 cut(s) 1114
PspXI VCTCGAGB 1 cut(s) 594
PsuI RGATCY 1 cut(s) 517
PvuI CGATCG 1 cut(s) 1227
PvuII CAGCTG 2 cut(s) 19, 286
RsaI GTAC 1 cut(s) 1340
RsaNI GTAC 1 cut(s) 1339
SalI GTCGAC 1 cut(s) 266
SapI GCTCTTC 1 cut(s) 1339
SaqAI TTAA 1 cut(s) 1067
SatI GCNGC 9 cut(s) 20, 221, 287, 342, 353, 390, 481, 750, 953
Sau3AI GATC 9 cut(s) 154, 318, 517, 558, 966, 1217, 1224, 1236, 1288
Sau96I GGNCC 9 cut(s) 207, 218, 689, 1020, 1021, 1042, 1114, 1131, 1144
SchI GAGTC 4 cut(s) 266, 586, 788, 967
ScrFI CCNGG 2 cut(s) 239, 525
SduI GDGCHC 2 cut(s) 66, 1024
SfaNI GCATC 4 cut(s) 45, 238, 328, 423
SfcI CTRYAG 1 cut(s) 582
Sfr274I CTCGAG 1 cut(s) 594
SgrDI CGTCGACG 1 cut(s) 266
SinI GGWCC 4 cut(s) 207, 689, 1114, 1144
SlaI CTCGAG 1 cut(s) 594
SmlI CTYRAG 2 cut(s) 202, 594
SmoI CTYRAG 2 cut(s) 202, 594
SphI GCATGC 1 cut(s) 701
Sse9I AATT 9 cut(s) 178, 333, 357, 675, 860, 1084, 1101, 1301, 1375
SspMI CTAG 3 cut(s) 5, 603, 866
StyD4I CCNGG 2 cut(s) 237, 523
StyI CCWWGG 1 cut(s) 9
TaaI ACNGT 4 cut(s) 475, 773, 881, 1012
TaiI ACGT 6 cut(s) 45, 200, 267, 856, 966, 1211
TaqI TCGA 5 cut(s) 267, 595, 624, 1220, 1227
TasI AATT 9 cut(s) 178, 333, 357, 675, 860, 1084, 1101, 1301, 1375
TauI GCSGC 4 cut(s) 223, 344, 483, 752
TfiI GAWTC 2 cut(s) 108, 635
Tru1I TTAA 1 cut(s) 1067
Tru9I TTAA 1 cut(s) 1067
TscAI CASTG 3 cut(s) 1017, 1098, 1327
TseFI GTSAC 2 cut(s) 43, 959
TseI GCWGC 5 cut(s) 19, 286, 352, 389, 952
Tsp45I GTSAC 2 cut(s) 43, 959
TspDTI ATGAA 6 cut(s) 471, 479, 559, 957, 1062, 1214
TspGWI ACGGA 4 cut(s) 157, 265, 326, 526
TspRI CASTG 3 cut(s) 1017, 1098, 1327
Van91I CCANNNNNTGG 1 cut(s) 1348
VpaK11BI GGWCC 4 cut(s) 207, 689, 1114, 1144
XapI RAATTY 4 cut(s) 357, 675, 1084, 1375
XceI RCATGY 1 cut(s) 701
XhoI CTCGAG 1 cut(s) 594
XmiI GTMKAC 1 cut(s) 267
XmnI GAANNNNTTC 1 cut(s) 1035
XspI CTAG 3 cut(s) 5, 603, 866
ZraI GACGTC 1 cut(s) 265
Zsp2I ATGCAT 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.