Rorug03G0072300

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
5756877 .. 5760875
3999 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0072300.1

Sequence Viewer

Length: 2661 bp
ATGGTAAAGGGAGGGAAAGTTAGTTCCAAGCGAAGAGTCAAACCACGGATTCGGTCTGATTATAAGGGTTCAGATGATTCGGATGAAGATTATGTGATTTCAGATGAAGAAAAGCTAGTTTCTGAGGAGTTGGAGGAGGATTATTGCTCCTCGTTGGATGGGAATGCATCAGAAGAGAGCTTTGGTAGTTTTGCAGAGGAGGAGGAGGAAGAGGAAGAGGAAGTGAGATGGGCGAGAAAGAACAGTAGATCAAGAGCGAAAAAGGGTGTTGATAGATTTATTGTGGACGGGGAGGAGGAGGAAGATGAAGAGGAAATGAAAAAGGTGAGAAAGAACGGTAGATCAAGATCGAAAAAGGGTAAAGATATATTTATTATGGAGGAGGAGGAGGAGGAGGAGGAAGATGAGGAAGAAATGAAAAAGGTGAGAAAGAACGGTAGATCAAGAGCGAAAAAGGGTAAAGCTTTATTTATTGTGGACGAGGAGGAGGATGAGCTGGAGGAGTTTGGGGTGGAGGAGGAAGAAGAAGAAGAGGAAGAGGCAATGAAAGAGGTGAGGAAGGTGGCTAGATCAAAGTCCCAAAACGGTTTCTCTGGAAGGCAGAAAAATAGGGTTAAAACATCACAAAAGAGGAGAAGGGCTACATATGAAGAAATGGCAGATCAGGATTATGATGATGAAGAAGATGACGACGACGACTACGATGAGGAATTTACACCCGATGAAGATGATTTTTCAGAATTGGAAGAAGAATCAAGGGTGAAAAAGAAGAAAACTAATGTGAAAGTGGGCAAGCGGCGTTTGAAGAAAAAAGTTCCTATAAGAAGAAAATCAAAGAAGCCTTTGAGAAAGAAACAAAAAAAGAATCGTACATTGAGGAGGAAAGTAAGATCTGATGATGATGATGGTGATTTTATGGACAGTAACCTGCCTGTTAGAGAGAAAAACAAGAAAAAAAGGCCAAACAAAAGGAGGAGATTTGTTGCTCCATCCGATTCAGATTTTGTGTCTTCTGGATCATCTGACTGTGATTACACCATCTCTGAGGAAGAGAGAGAGCAAGTGAGGGAAGCCATGCAGCTGTGCGGAAGTTTGGAACCTAATTTGAGAAGCCCATTACTGCCTGACAAAATTCAGGAGAATGAGATTGTAGAACTGCCAAGAAAGCCTCCTGGTAGGAAAGGTAAAGAAAAGGTTGAGCAAGTGAAGGTCGAGGTGGTTAAGCAGGTCTGTGGAATTTGTCTCTCTGAGGAAGATAAGAGAAGAGTGAGGGGAACACTAGACTGCTGCACTCATTATTTTTGTTTTTCCTGCATCATGGAATGGGGCAAAGTGGAATCTCGCTGCCCGTTATGCAAGCAGAGGTTTAAAGCAATTAGTAAACCCACAAGAGCAGGAACTGATTTGAGAGACGTGGTGATAACAGTCCCTGAGCGTGATCAGGTTTATCAGCCGACAGAAGAAGAACTGAGAAGTTATCTTGACCCTTATGAGAATGTGATTTGTACAGAATGTCATGAAGGTGGAGATGATGGGCTCATGCTACTGTGTGATGTGTGTGATTCACCTGCTCACACCTTTTGTGTTGGTCTTGGGCGGGAAGTACCCGAAGGTAATTGGTACTGTGATGGTTGTAGACCTGTTGCTCTGGGATCCTCAAGTTCCCAGGTTCAAGGTTGGTTAAGTGAGCAGAGAACTACAAACAACATCTTGCCTAATAGACAATCACCGGGTGTAAGTTTTGGTGAAGGTTTAGAGATAGACCTTAATTCAGTGTCCTCTCCTCGTCCCTATATTACTCAAGGATTTGGGAACTCCTCCTCCCCTTGGTTTCATGTTGGAGGTTTTCAAGTAGCTTCCCCGGGATCTGGGGCAGGGGCACCAACTCTGTCAGGAAGACGTTTAATGCACCGTCATATTCAGCAATTGATTACTGCTAATAGAATGAATTATTTGGCCAGTAGAAATGAGAGGAATTCATCTGCTAATTTGAGTACTGATGTCTTAAATGCTCAAACTGCTCAGGGGAGGGAAACAGTAGTTCAGCATACAAGGACAGACGGAATGGACAGATCTTTTCACACATTCTTTGAGGAGAGATTACAAGAAAACCCCTCACTACAAGTGCAGGATAATGATATCTTTTTGTCAACATCAAGCCATCAGAGAAGGCAAGTAGTCCAGGATCCAACTACAACTTCTGCTGATAGACCTAGCAATGGAACATTATGGCCTGGACTTACAGAGAATACAATATCAGGTCCCCCTCACTTCAGCAGTATATCCGATGGTGGTGTGTCCCCCAATACAGTTATGGGACCAAGTGATTTTCACAGAGCAAAGGAACAACTGCAATCATTGGTCATAAGCCACGTAAAAAACTTATCCCGAGATAGGGATTTAGGCCAAAGTTCTACTACTTTCCAGGAGATCGCAAGGAGTGCTATGCACACCGTCCTAGCTGCATGTGAACTGGAGCACACAGGCAGTGAGGTAGTTCCTGTGCCGCCTTCGTCACCCTGCCCTCACATTGAATTAATGGCGGGAAAGACAAGTCTGATGAGAGGTTGCTGTTCATCTTGTTTTGCACAGTTCGTTGAGGACGTGGTAAAGAGGGTCATGGAATACAAACTACCGCCGTGGTTGAGATTAGCTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

886

Amino Acids

100.77

Weight (kDa)

5.35

Isoelectric Point (pI)

74.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 410 - 453 8.9e-07 Ring finger domain
PHD PF00628 502 - 545 1.6e-07 PHD-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000031)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05755
fragaria_vesca FvH4_1g13571 FvH4_2g06951 FvH4_2g09612 FvH4_3g24991 FvH4_3g39131 FvH4_4g01331 FvH4_5g11071 FvH4_5g22144 FvH4_5g22144 FvH4_5g27541 FvH4_5g38601 FvH4_6g09211 FvH4_6g17161 FvH4_6g30101 FvH4_6g30102 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g51131 FvH4_7g28851
malus_domestica MD02G1021900.v1.1 MD02G1050700.v1.1 MD02G1314000.v1.1 MD05G1244100.v1.1 MD07G1021300.v1.1 MD09G1113200.v1.1 MD09G1113300.v1.1 MD13G1019000.v1.1 MD17G1103400.v1.1
prunus_persica Prupe.1G484600_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.4G283800_v2.0.a1
pyrus_communis pycom01g13080 pycom03g05530 pycom05g09360 pycom05g20240 pycom06g06350 pycom06g14660 pycom09g03750 pycom13g22930 pycom14g00800 pycom15g35930 pycom17g09770 pycom17g25010
rosa_chinensis RchiOBHm_Chr1g0316991 RchiOBHm_Chr1g0321411 RchiOBHm_Chr1g0341061 RchiOBHm_Chr1g0352021 RchiOBHm_Chr1g0357231 RchiOBHm_Chr1g0361641 RchiOBHm_Chr1g0379151 RchiOBHm_Chr2g0084861 RchiOBHm_Chr2g0092021 RchiOBHm_Chr2g0102721 RchiOBHm_Chr2g0119161 RchiOBHm_Chr2g0120021 RchiOBHm_Chr2g0120031 RchiOBHm_Chr2g0120451 RchiOBHm_Chr2g0129631 RchiOBHm_Chr2g0133661 RchiOBHm_Chr2g0140031 RchiOBHm_Chr2g0154361 RchiOBHm_Chr2g0158311 RchiOBHm_Chr2g0160431 RchiOBHm_Chr2g0167951 RchiOBHm_Chr2g0168801 RchiOBHm_Chr3g0451531 RchiOBHm_Chr3g0453641 RchiOBHm_Chr3g0453831 RchiOBHm_Chr3g0455401 RchiOBHm_Chr3g0457461 RchiOBHm_Chr3g0459251 RchiOBHm_Chr3g0462451 RchiOBHm_Chr3g0465511 RchiOBHm_Chr3g0466111 RchiOBHm_Chr3g0469201 RchiOBHm_Chr3g0472791 RchiOBHm_Chr3g0472841 RchiOBHm_Chr4g0391691 RchiOBHm_Chr4g0393351 RchiOBHm_Chr4g0395061 RchiOBHm_Chr4g0395191 RchiOBHm_Chr4g0397541 RchiOBHm_Chr4g0402261 RchiOBHm_Chr4g0409421 RchiOBHm_Chr4g0417481 RchiOBHm_Chr4g0428291 RchiOBHm_Chr4g0434281 RchiOBHm_Chr4g0437231 RchiOBHm_Chr4g0439261 RchiOBHm_Chr5g0000531 RchiOBHm_Chr5g0016091 RchiOBHm_Chr5g0018801 RchiOBHm_Chr5g0026401 RchiOBHm_Chr5g0051821 RchiOBHm_Chr5g0062261 RchiOBHm_Chr5g0070711 RchiOBHm_Chr5g0074731 RchiOBHm_Chr5g0077831 RchiOBHm_Chr6g0251621 RchiOBHm_Chr6g0253181 RchiOBHm_Chr6g0258241 RchiOBHm_Chr6g0259301 RchiOBHm_Chr6g0263381 RchiOBHm_Chr6g0264461 RchiOBHm_Chr6g0278601 RchiOBHm_Chr6g0299951 RchiOBHm_Chr7g0184971 RchiOBHm_Chr7g0185631 RchiOBHm_Chr7g0200601 RchiOBHm_Chr7g0206171 RchiOBHm_Chr7g0222341 RchiOBHm_Chr7g0237631
rosa_laevigata RLG00000012173 RLG00000021075
rosa_multiflora Rmu_co8065174.1_g000001 Rmu_co8074360.1_g000001 Rmu_co8095164.1_g000001 Rmu_co8204978.1_g000001 Rmu_co8329721.1_g000001 Rmu_co8347171.1_g000001 Rmu_co8395661.1_g000001 Rmu_co8466967.1_g000001 Rmu_sc0000030.1_g000008 Rmu_sc0000290.1_g000015 Rmu_sc0000294.1_g000012 Rmu_sc0000319.1_g000020 Rmu_sc0000418.1_g000014 Rmu_sc0000423.1_g000010 Rmu_sc0000427.1_g000013 Rmu_sc0000430.1_g000011 Rmu_sc0000487.1_g000037 Rmu_sc0000765.1_g000028 Rmu_sc0000770.1_g000037 Rmu_sc0000785.1_g000011 Rmu_sc0000811.1_g000011 Rmu_sc0000848.1_g000004 Rmu_sc0000897.1_g000007 Rmu_sc0000955.1_g000014 Rmu_sc0001004.1_g000019 Rmu_sc0001010.1_g000068 Rmu_sc0001021.1_g000008 Rmu_sc0001084.1_g000013 Rmu_sc0001111.1_g000002 Rmu_sc0001190.1_g000015 Rmu_sc0001308.1_g000013 Rmu_sc0001398.1_g000010 Rmu_sc0001680.1_g000005 Rmu_sc0001926.1_g000017 Rmu_sc0001942.1_g000074 Rmu_sc0002068.1_g000010 Rmu_sc0002113.1_g000019 Rmu_sc0002299.1_g000032 Rmu_sc0002531.1_g000026 Rmu_sc0002549.1_g000005 Rmu_sc0002634.1_g000001 Rmu_sc0002640.1_g000014 Rmu_sc0002831.1_g000005 Rmu_sc0002848.1_g000018 Rmu_sc0003005.1_g000027 Rmu_sc0003076.1_g000012 Rmu_sc0003124.1_g000001 Rmu_sc0003143.1_g000004 Rmu_sc0003143.1_g000005 Rmu_sc0003143.1_g000006 Rmu_sc0003302.1_g000009 Rmu_sc0003368.1_g000035 Rmu_sc0003462.1_g000001 Rmu_sc0003692.1_g000016 Rmu_sc0003855.1_g000007 Rmu_sc0003858.1_g000008 Rmu_sc0004277.1_g000031 Rmu_sc0004732.1_g000013 Rmu_sc0004748.1_g000005 Rmu_sc0005091.1_g000024 Rmu_sc0005124.1_g000001 Rmu_sc0005167.1_g000001 Rmu_sc0005242.1_g000003 Rmu_sc0005486.1_g000005 Rmu_sc0005597.1_g000008 Rmu_sc0005653.1_g000004 Rmu_sc0006080.1_g000016 Rmu_sc0006371.1_g000003 Rmu_sc0006415.1_g000001 Rmu_sc0006522.1_g000003 Rmu_sc0006596.1_g000007 Rmu_sc0006991.1_g000005 Rmu_sc0007070.1_g000004 Rmu_sc0007737.1_g000005 Rmu_sc0007856.1_g000001 Rmu_sc0008241.1_g000001 Rmu_sc0008393.1_g000006 Rmu_sc0008563.1_g000008 Rmu_sc0008904.1_g000006 Rmu_sc0010313.1_g000014 Rmu_sc0010693.1_g000002 Rmu_sc0010917.1_g000011 Rmu_sc0011232.1_g000003 Rmu_sc0011978.1_g000005 Rmu_sc0012782.1_g000003 Rmu_sc0013716.1_g000002 Rmu_sc0015429.1_g000002 Rmu_sc0015649.1_g000014 Rmu_sc0021955.1_g000004 Rmu_sc0024117.1_g000001 Rmu_sc0024816.1_g000001 Rmu_sc0024816.1_g000006 Rmu_sc0026593.1_g000003 Rmu_sc0028245.1_g000001 Rmu_sc0029783.1_g000006 Rmu_sc0030817.1_g000001 Rmu_sc0031096.1_g000001 Rmu_sc0034014.1_g000001 Rmu_sc0036569.1_g000001 Rmu_sc0039034.1_g000001 Rmu_ssc0000004.1_g000015 Rmu_ssc0000053.1_g000002 Rmu_ssc0000126.1_g000069 Rmu_ssc0000211.1_g000020 Rmu_ssc0000295.1_g000005 Rmu_ssc0000359.1_g000057 Rmu_ssc0000385.1_g000011 Rmu_ssc0000416.1_g000004 Rmu_ssc0000434.1_g000018
rosa_roxburghii Rroxscaffold_159G00432920 Rroxscaffold_2G00091500 Rroxscaffold_2G00123510 Rroxscaffold_2G00124730 Rroxscaffold_2G00126030 Rroxscaffold_2G00138160 Rroxscaffold_2G00153260 Rroxscaffold_3G00224470 Rroxscaffold_3G00244670 Rroxscaffold_3G00261920 Rroxscaffold_3G00264150 Rroxscaffold_3G00270420 Rroxscaffold_4G00285150 Rroxscaffold_4G00299830 Rroxscaffold_4G00311290 Rroxscaffold_4G00323970 Rroxscaffold_5G00374550 Rroxscaffold_6G00427060 Rroxscaffold_7G00169160 Rroxscaffold_7G00174970
rosa_rugosa Rorug01G0012500 Rorug01G0046200 Rorug01G0118800 Rorug01G0120200 Rorug01G0135400.1 Rorug01G0174200 Rorug01G0204600 Rorug01G0253500 Rorug01G0290500 Rorug01G0290800 Rorug01G0312100 Rorug01G0333700 Rorug01G0339600 Rorug01G0377800 Rorug01G0400400 Rorug01G0402200 Rorug01G0410700 Rorug01G0431400 Rorug02G0011900 Rorug02G0012500 Rorug02G0022300 Rorug02G0062400 Rorug02G0085300 Rorug02G0091800 Rorug02G0104500 Rorug02G0125400 Rorug02G0131000 Rorug02G0147300 Rorug02G0171000 Rorug02G0181500 Rorug02G0196900 Rorug02G0207200 Rorug02G0226600 Rorug02G0241300 Rorug02G0274300 Rorug02G0280600 Rorug02G0280800 Rorug02G0304600 Rorug02G0304700 Rorug02G0338800 Rorug02G0375800 Rorug02G0379300 Rorug02G0379400 Rorug02G0447600 Rorug02G0459900 Rorug02G0467200 Rorug02G0535400 Rorug03G0072300 Rorug03G0218900 Rorug03G0223700 Rorug03G0231500 Rorug03G0257200 Rorug03G0257300 Rorug03G0257400 Rorug03G0265700 Rorug03G0290200 Rorug03G0291300 Rorug03G0311000 Rorug03G0326900 Rorug03G0332700 Rorug03G0352000 Rorug03G0369700.1 Rorug04G0014000 Rorug04G0014500 Rorug04G0124100 Rorug04G0142100 Rorug04G0151400 Rorug04G0160700 Rorug04G0186400 Rorug04G0227600 Rorug04G0253800 Rorug04G0274400 Rorug04G0274600 Rorug04G0295600 Rorug04G0302000 Rorug04G0320600 Rorug04G0331300 Rorug04G0352200 Rorug04G0407000 Rorug04G0430300 Rorug04G0443000 Rorug04G0446400 Rorug04G0459000 Rorug05G0042400 Rorug05G0042500 Rorug05G0064900 Rorug05G0074300 Rorug05G0097700 Rorug05G0102300 Rorug05G0102300 Rorug05G0123700 Rorug05G0145800 Rorug05G0152900 Rorug05G0175900 Rorug05G0182100 Rorug05G0196000 Rorug05G0207000 Rorug05G0212800 Rorug05G0226400 Rorug05G0241500 Rorug05G0264800.1 Rorug05G0269600 Rorug05G0298200 Rorug05G0304300 Rorug05G0344300 Rorug05G0382300 Rorug05G0392300.1 Rorug05G0427900 Rorug05G0433500 Rorug05G0452700 Rorug05G0464600 Rorug05G0475800 Rorug05G0488600 Rorug05G0493000 Rorug05G0504800 Rorug05G0505500.1 Rorug05G0508400 Rorug05G0545800 Rorug05G0587000 Rorug05G0591100.1 Rorug06G0013200 Rorug06G0037700 Rorug06G0098200 Rorug06G0184500 Rorug06G0185300 Rorug06G0188200 Rorug06G0208300 Rorug06G0212900 Rorug06G0251500 Rorug06G0328000 Rorug06G0366100 Rorug06G0367400 Rorug06G0371200 Rorug06G0393500 Rorug06G0423000 Rorug06G0440500 Rorug06G0445400 Rorug06G0451700 Rorug06G0479400 Rorug06G0479500 Rorug06G0479600 Rorug06G0479700 Rorug06G0479800 Rorug06G0483100 Rorug07G0001200 Rorug07G0005200 Rorug07G0068600 Rorug07G0109300 Rorug07G0115500 Rorug07G0117000 Rorug07G0123500 Rorug07G0128000 Rorug07G0128100 Rorug07G0225500 Rorug07G0280200 Rorug07G0317300
rosa_samantha Rh1AG251400 Rh1BG133300 Rh1CG079900 Rh1CG235600 Rh1DG168000 Rh2AG533100 Rh2BG546900 Rh2CG517000 Rh2DG237900 Rh2DG555900 Rh3CG293400 Rh4AG419800 Rh4BG306300 Rh4CG446100 Rh5AG268900 Rh5AG282600 Rh5BG006600 Rh5BG345700 Rh5CG468100 Rh6CG190700 Rh6DG111900 Rh7BG172200 Rh7BG412200
rosa_wichuraiana Rw0G003620 Rw0G004000 Rw0G011770 Rw0G019070 Rw0G020070 Rw1G002990 Rw1G003550 Rw1G003860 Rw1G005930 Rw1G018430 Rw1G021160 Rw1G023820 Rw1G032700 Rw1G035790 Rw1G036160 Rw1G038660 Rw1G039380 Rw2G016120 Rw2G018680 Rw2G026860 Rw2G028670 Rw2G040870 Rw2G041040 Rw2G041410 Rw2G044140 Rw2G047570 Rw3G019760 Rw4G031020 Rw5G003700 Rw5G004830 Rw5G037470 Rw5G047400 Rw6G020150 Rw6G024010 Rw6G026600 Rw7G002480 Rw7G004430 Rw7G011870 Rw7G035520 Rw7G041260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 63
AarI CACCTGC 1 cut(s) 1576
Acc36I ACCTGC 3 cut(s) 936, 1216, 1576
AccB1I GGYRCC 1 cut(s) 1879
AccI GTMKAC 1 cut(s) 1636
AciI CCGC 6 cut(s) 796, 1086, 1597, 2507, 2543, 2636
AclWI GGATC 6 cut(s) 1024, 1647, 1660, 1873, 2180, 2193
AcoI YGGCCR 1 cut(s) 1956
AcsI RAATTY 4 cut(s) 710, 1131, 1236, 1975
AcuI CTGAAG 1 cut(s) 2257
AdeI CACNNNGTG 1 cut(s) 1733
AfaI GTAC 5 cut(s) 871, 1507, 1605, 1622, 1996
AfiI CCNNNNNNNGG 5 cut(s) 1827, 1868, 2219, 2394, 2395
AgsI TTSAA 4 cut(s) 805, 1673, 1850, 2534
AjiI CACGTC 2 cut(s) 1414, 2605
AjnI CCWGG 5 cut(s) 1171, 1665, 2181, 2233, 2424
AjuI GAANNNNNNNTTGG 4 cut(s) 165, 197, 2182, 2214
AloI GAACNNNNNNTCC 4 cut(s) 7, 39, 1805, 1837
AluBI AGCT 8 cut(s) 115, 180, 464, 496, 1081, 1856, 2462, 2654
AluI AGCT 8 cut(s) 115, 180, 464, 496, 1081, 1856, 2462, 2654
Alw21I GWGCWC 1 cut(s) 2481
Alw26I GTCTC 2 cut(s) 1247, 1404
AlwI GGATC 6 cut(s) 1024, 1647, 1660, 1873, 2180, 2193
AlwNI CAGNNNCTG 2 cut(s) 1400, 1430
Ama87I CYCGRG 2 cut(s) 1861, 2388
AoxI GGCC 4 cut(s) 959, 1956, 2231, 2404
ApeKI GCWGC 4 cut(s) 1078, 1287, 1344, 2462
ApoI RAATTY 4 cut(s) 710, 1131, 1236, 1975
AseI ATTAAT 1 cut(s) 2537
AspS9I GGNCC 2 cut(s) 2261, 2318
AsuC2I CCSGG 3 cut(s) 1731, 1862, 1863
AvaI CYCGRG 2 cut(s) 1861, 2388
AvaII GGWCC 2 cut(s) 2261, 2318
BaeGI GKGCMC 1 cut(s) 1882
BalI TGGCCA 1 cut(s) 1958
BamHI GGATCC 2 cut(s) 1652, 2185
BanI GGYRCC 1 cut(s) 1879
BanII GRGCYC 1 cut(s) 1539
BbsI GAAGAC 2 cut(s) 1002, 1903
Bbv12I GWGCWC 1 cut(s) 2481
BbvI GCAGC 4 cut(s) 1090, 1274, 1331, 2449
BccI CCATC 9 cut(s) 152, 222, 899, 997, 1046, 1526, 1622, 2169, 2282
BceAI ACGGC 1 cut(s) 2623
BciT130I CCWGG 5 cut(s) 1173, 1667, 2183, 2235, 2426
BclI TGATCA 1 cut(s) 1438
BcnI CCSGG 3 cut(s) 1731, 1862, 1863
BcoDI GTCTC 2 cut(s) 1247, 1404
BfaI CTAG 5 cut(s) 116, 567, 1280, 2214, 2459
BfuAI ACCTGC 3 cut(s) 936, 1216, 1576
BglII AGATCT 2 cut(s) 890, 2072
BisI GCNGC 6 cut(s) 797, 1079, 1288, 1345, 2463, 2507
BlsI GCNGC 6 cut(s) 798, 1080, 1289, 1346, 2464, 2508
BmcAI AGTACT 1 cut(s) 1996
Bme1390I CCNGG 8 cut(s) 1173, 1667, 1731, 1862, 1863, 2183, 2235, 2426
Bme18I GGWCC 2 cut(s) 2261, 2318
BmeT110I CYCGRG 2 cut(s) 1861, 2388
BmgBI CACGTC 2 cut(s) 1414, 2605
BmgT120I GGNCC 2 cut(s) 2261, 2318
BmiI GGNNCC 6 cut(s) 1098, 1654, 1881, 2187, 2263, 2319
BmrFI CCNGG 8 cut(s) 1173, 1667, 1731, 1862, 1863, 2183, 2235, 2426
BmsI GCATC 2 cut(s) 176, 1323
BpiI GAAGAC 2 cut(s) 1002, 1903
BplI GAGNNNNNCTC 1 cut(s) 2638
BpmI CTGGAG 2 cut(s) 518, 2495
Bpu10I CCTNAGC 2 cut(s) 1431, 2022
BpuEI CTTGAG 2 cut(s) 1642, 1785
BpuMI CCSGG 3 cut(s) 1731, 1862, 1863
BsaAI YACGTR 1 cut(s) 2374
BsaBI GATNNNNATC 1 cut(s) 346
BsaJI CCNNGG 6 cut(s) 44, 1665, 1826, 1860, 1861, 2639
BsaXI ACNNNNNCTCC 3 cut(s) 33, 1805, 1835
Bsc4I CCNNNNNNNGG 5 cut(s) 1827, 1868, 2219, 2394, 2395
Bse1I ACTGG 2 cut(s) 1959, 2478
Bse3DI GCAATG 2 cut(s) 549, 2224
Bse8I GATNNNNATC 1 cut(s) 346
BseBI CCWGG 5 cut(s) 1173, 1667, 2183, 2235, 2426
BseDI CCNNGG 6 cut(s) 44, 1665, 1826, 1860, 1861, 2639
BseGI GGATG 4 cut(s) 88, 163, 496, 989
BseJI GATNNNNATC 1 cut(s) 346
BseLI CCNNNNNNNGG 5 cut(s) 1827, 1868, 2219, 2394, 2395
BseMI GCAATG 2 cut(s) 549, 2224
BseMII CTCAG 6 cut(s) 114, 1035, 1239, 1422, 1460, 2036
BseNI ACTGG 2 cut(s) 1959, 2478
BseSI GKGCMC 1 cut(s) 1882
BseXI GCAGC 4 cut(s) 1090, 1274, 1331, 2449
BsgI GTGCAG 2 cut(s) 1273, 2147
BshFI GGCC 4 cut(s) 961, 1958, 2233, 2406
BshNI GGYRCC 1 cut(s) 1879
BsiHKAI GWGCWC 1 cut(s) 2481
BsiHKCI CYCGRG 2 cut(s) 1861, 2388
BsiSI CCGG 2 cut(s) 1730, 1862
BslFI GGGAC 6 cut(s) 562, 1412, 1773, 2247, 2284, 2331
BslI CCNNNNNNNGG 5 cut(s) 1827, 1868, 2219, 2394, 2395
BsmAI GTCTC 2 cut(s) 1247, 1404
BsmBI CGTCTC 1 cut(s) 1404
BsmFI GGGAC 6 cut(s) 562, 1412, 1773, 2247, 2284, 2331
BsmI GAATGC 1 cut(s) 169
BsnI GGCC 4 cut(s) 961, 1958, 2233, 2406
BsoBI CYCGRG 2 cut(s) 1861, 2388
Bsp1286I GDGCHC 3 cut(s) 1539, 1882, 2481
Bsp1407I TGTACA 1 cut(s) 1505
BspACI CCGC 6 cut(s) 796, 1086, 1597, 2507, 2543, 2636
BspANI GGCC 4 cut(s) 961, 1958, 2233, 2406
BspCNI CTCAG 6 cut(s) 115, 1036, 1240, 1423, 1461, 2035
BspHI TCATGA 1 cut(s) 1516
BspLI GGNNCC 6 cut(s) 1098, 1654, 1881, 2187, 2263, 2319
BspMI ACCTGC 3 cut(s) 936, 1216, 1576
BspPI GGATC 6 cut(s) 1024, 1647, 1660, 1873, 2180, 2193
BspT107I GGYRCC 1 cut(s) 1879
BsrDI GCAATG 2 cut(s) 549, 2224
BsrGI TGTACA 1 cut(s) 1505
BsrI ACTGG 2 cut(s) 1959, 2478
BssECI CCNNGG 6 cut(s) 44, 1665, 1826, 1860, 1861, 2639
BssT1I CCWWGG 1 cut(s) 1826
Bst2UI CCWGG 5 cut(s) 1173, 1667, 2183, 2235, 2426
Bst6I CTCTTC 9 cut(s) 28, 168, 204, 210, 303, 525, 531, 1044, 1258
BstAPI GCANNNNNTGC 1 cut(s) 2441
BstAUI TGTACA 1 cut(s) 1505
BstBAI YACGTR 1 cut(s) 2374
BstC8I GCNNGC 2 cut(s) 794, 1358
BstDEI CTNAG 6 cut(s) 123, 1044, 1248, 1431, 1469, 2022
BstDSI CCRYGG 2 cut(s) 44, 2639
BstF5I GGATG 4 cut(s) 88, 163, 496, 989
BstMAI GTCTC 2 cut(s) 1247, 1404
BstMWI GCNNNNNNNGC 4 cut(s) 1165, 1353, 2018, 2441
BstNI CCWGG 5 cut(s) 1173, 1667, 2183, 2235, 2426
BstNSI RCATGY 1 cut(s) 2469
BstSCI CCNGG 8 cut(s) 1171, 1665, 1729, 1860, 1861, 2181, 2233, 2424
BstSLI GKGCMC 1 cut(s) 1882
BstV1I GCAGC 4 cut(s) 1090, 1274, 1331, 2449
BstV2I GAAGAC 2 cut(s) 1002, 1903
BstX2I RGATCY 5 cut(s) 890, 1652, 1865, 2072, 2185
BstYI RGATCY 5 cut(s) 890, 1652, 1865, 2072, 2185
BsuRI GGCC 4 cut(s) 961, 1958, 2233, 2406
BtgI CCRYGG 2 cut(s) 44, 2639
BtrI CACGTC 2 cut(s) 1414, 2605
BtsCI GGATG 4 cut(s) 88, 163, 496, 989
BtsI GCAGTG 1 cut(s) 2494
BtsIMutI CAGTG 2 cut(s) 1779, 2494
BveI ACCTGC 3 cut(s) 936, 1216, 1576
Cac8I GCNNGC 2 cut(s) 794, 1358
CaiI CAGNNNCTG 2 cut(s) 1400, 1430
CciI TCATGA 1 cut(s) 1516
Cfr13I GGNCC 2 cut(s) 2261, 2318
Cfr9I CCCGGG 1 cut(s) 1861
Csp6I GTAC 5 cut(s) 870, 1506, 1604, 1621, 1995
CviAII CATG 7 cut(s) 1075, 1318, 1517, 1540, 1835, 2466, 2620
CviQI GTAC 5 cut(s) 870, 1506, 1604, 1621, 1995
DdeI CTNAG 6 cut(s) 123, 1044, 1248, 1431, 1469, 2022
DraI TTTAAA 1 cut(s) 1369
DraIII CACNNNGTG 1 cut(s) 1733
EaeI YGGCCR 1 cut(s) 1956
Eam1104I CTCTTC 9 cut(s) 28, 168, 204, 210, 303, 525, 531, 1044, 1258
EarI CTCTTC 9 cut(s) 28, 168, 204, 210, 303, 525, 531, 1044, 1258
Eco130I CCWWGG 1 cut(s) 1826
Eco24I GRGCYC 1 cut(s) 1539
Eco32I GATATC 1 cut(s) 2140
Eco47I GGWCC 2 cut(s) 2261, 2318
Eco57I CTGAAG 1 cut(s) 2257
Eco88I CYCGRG 2 cut(s) 1861, 2388
EcoO109I RGGNCCY 1 cut(s) 2261
EcoRI GAATTC 1 cut(s) 1975
EcoRII CCWGG 5 cut(s) 1171, 1665, 2181, 2233, 2424
EcoRV GATATC 1 cut(s) 2140
EcoT14I CCWWGG 1 cut(s) 1826
EcoT22I ATGCAT 1 cut(s) 169
EcoT38I GRGCYC 1 cut(s) 1539
ErhI CCWWGG 1 cut(s) 1826
Esp3I CGTCTC 1 cut(s) 1404
FaeI CATG 7 cut(s) 1078, 1321, 1520, 1543, 1838, 2469, 2623
FaqI GGGAC 6 cut(s) 562, 1412, 1773, 2247, 2284, 2331
FatI CATG 7 cut(s) 1074, 1317, 1516, 1539, 1834, 2465, 2619
FauI CCCGC 2 cut(s) 1590, 2536
FauNDI CATATG 1 cut(s) 646
FbaI TGATCA 1 cut(s) 1438
FblI GTMKAC 1 cut(s) 1636
Fnu4HI GCNGC 6 cut(s) 797, 1079, 1288, 1345, 2463, 2507
FokI GGATG 4 cut(s) 95, 170, 503, 976
FriOI GRGCYC 1 cut(s) 1539
Fsp4HI GCNGC 6 cut(s) 797, 1079, 1288, 1345, 2463, 2507
FspBI CTAG 5 cut(s) 116, 567, 1280, 2214, 2459
GluI GCNGC 6 cut(s) 797, 1079, 1288, 1345, 2463, 2507
GsuI CTGGAG 2 cut(s) 518, 2495
HaeIII GGCC 4 cut(s) 961, 1958, 2233, 2406
HapII CCGG 2 cut(s) 1730, 1862
Hin1II CATG 7 cut(s) 1078, 1321, 1520, 1543, 1838, 2469, 2623
HincII GTYRAC 1 cut(s) 2151
HindII GTYRAC 1 cut(s) 2151
HindIII AAGCTT 1 cut(s) 462
HinfI GANTC 8 cut(s) 36, 49, 77, 752, 865, 995, 1337, 1562
HpaII CCGG 2 cut(s) 1730, 1862
Hpy166II GTNNAC 6 cut(s) 286, 478, 1382, 1637, 2151, 2471
Hpy8I GTNNAC 6 cut(s) 286, 478, 1382, 1637, 2151, 2471
Hpy99I CGWCG 2 cut(s) 695, 698
HpyAV CCTTC 9 cut(s) 553, 591, 630, 1201, 1514, 1604, 1742, 2163, 2520
HpyCH4IV ACGT 4 cut(s) 1413, 1900, 2373, 2604
HpyF10VI GCNNNNNNNGC 4 cut(s) 1165, 1353, 2018, 2441
HpyF3I CTNAG 6 cut(s) 123, 1044, 1248, 1431, 1469, 2022
HpySE526I ACGT 4 cut(s) 1413, 1900, 2373, 2604
Hsp92II CATG 7 cut(s) 1078, 1321, 1520, 1543, 1838, 2469, 2623
Ksp22I TGATCA 1 cut(s) 1438
LmnI GCTCC 3 cut(s) 152, 991, 2476
Lsp1109I GCAGC 4 cut(s) 1090, 1274, 1331, 2449
LweI GCATC 2 cut(s) 176, 1323
MaeI CTAG 5 cut(s) 116, 567, 1280, 2214, 2459
MaeII ACGT 4 cut(s) 1413, 1900, 2373, 2604
MaeIII GTNAC 2 cut(s) 923, 2514
MfeI CAATTG 1 cut(s) 1925
MflI RGATCY 5 cut(s) 890, 1652, 1865, 2072, 2185
MhlI GDGCHC 3 cut(s) 1539, 1882, 2481
MlsI TGGCCA 1 cut(s) 1958
MluNI TGGCCA 1 cut(s) 1958
MlyI GAGTC 1 cut(s) 45
MmeI TCCRAC 4 cut(s) 111, 135, 1819, 2213
Mox20I TGGCCA 1 cut(s) 1958
Mph1103I ATGCAT 1 cut(s) 169
MscI TGGCCA 1 cut(s) 1958
MseI TTAA 8 cut(s) 615, 1221, 1368, 1682, 1767, 1904, 2006, 2537
MslI CAYNNNNRTG 1 cut(s) 1521
Msp20I TGGCCA 1 cut(s) 1958
MspA1I CMGCKG 1 cut(s) 1081
MspI CCGG 2 cut(s) 1730, 1862
MspR9I CCNGG 8 cut(s) 1173, 1667, 1731, 1862, 1863, 2183, 2235, 2426
MunI CAATTG 1 cut(s) 1925
Mva1269I GAATGC 1 cut(s) 169
MvaI CCWGG 5 cut(s) 1173, 1667, 2183, 2235, 2426
MwoI GCNNNNNNNGC 4 cut(s) 1165, 1353, 2018, 2441
NciI CCSGG 3 cut(s) 1731, 1862, 1863
NdeI CATATG 1 cut(s) 646
NlaIII CATG 7 cut(s) 1078, 1321, 1520, 1543, 1838, 2469, 2623
NlaIV GGNNCC 6 cut(s) 1098, 1654, 1881, 2187, 2263, 2319
NmuCI GTSAC 1 cut(s) 2514
NsiI ATGCAT 1 cut(s) 169
NspI RCATGY 1 cut(s) 2469
PagI TCATGA 1 cut(s) 1516
PaqCI CACCTGC 1 cut(s) 1576
PcsI WCGNNNNNNNCGW 2 cut(s) 699, 2601
PctI GAATGC 1 cut(s) 169
PfeI GAWTC 7 cut(s) 49, 77, 752, 865, 995, 1337, 1562
PfoI TCCNGGA 2 cut(s) 2181, 2424
PkrI GCNGC 6 cut(s) 798, 1080, 1289, 1346, 2464, 2508
PleI GAGTC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 44
Ppu21I YACGTR 1 cut(s) 2374
PpuMI RGGWCCY 1 cut(s) 2261
PshBI ATTAAT 1 cut(s) 2537
PsiI TTATAA 1 cut(s) 63
Psp5II RGGWCCY 1 cut(s) 2261
Psp6I CCWGG 5 cut(s) 1171, 1665, 2181, 2233, 2424
PspGI CCWGG 5 cut(s) 1171, 1665, 2181, 2233, 2424
PspN4I GGNNCC 6 cut(s) 1098, 1654, 1881, 2187, 2263, 2319
PspPI GGNCC 2 cut(s) 2261, 2318
PspPPI RGGWCCY 1 cut(s) 2261
PstNI CAGNNNCTG 2 cut(s) 1400, 1430
PsuI RGATCY 5 cut(s) 890, 1652, 1865, 2072, 2185
PvuII CAGCTG 1 cut(s) 1081
RsaI GTAC 5 cut(s) 871, 1507, 1605, 1622, 1996
RsaNI GTAC 5 cut(s) 870, 1506, 1604, 1621, 1995
RseI CAYNNNNRTG 1 cut(s) 1521
SaqAI TTAA 8 cut(s) 615, 1221, 1368, 1682, 1767, 1904, 2006, 2537
SatI GCNGC 6 cut(s) 797, 1079, 1288, 1345, 2463, 2507
Sau96I GGNCC 2 cut(s) 2261, 2318
ScaI AGTACT 1 cut(s) 1996
SchI GAGTC 1 cut(s) 45
ScrFI CCNGG 8 cut(s) 1173, 1667, 1731, 1862, 1863, 2183, 2235, 2426
SduI GDGCHC 3 cut(s) 1539, 1882, 2481
SfaNI GCATC 2 cut(s) 176, 1323
SinI GGWCC 2 cut(s) 2261, 2318
SmaI CCCGGG 1 cut(s) 1863
SmiMI CAYNNNNRTG 1 cut(s) 1521
SmlI CTYRAG 2 cut(s) 1657, 1800
SmoI CTYRAG 2 cut(s) 1657, 1800
SsiI CCGC 6 cut(s) 796, 1086, 1597, 2507, 2543, 2636
SspMI CTAG 5 cut(s) 116, 567, 1280, 2214, 2459
StyD4I CCNGG 8 cut(s) 1171, 1665, 1729, 1860, 1861, 2181, 2233, 2424
StyI CCWWGG 1 cut(s) 1826
TaiI ACGT 4 cut(s) 1416, 1903, 2376, 2607
TaqI TCGA 2 cut(s) 350, 1212
TaqII GACCGA 1 cut(s) 42
TatI WGTACW 2 cut(s) 1505, 1994
TauI GCSGC 2 cut(s) 799, 2509
TfiI GAWTC 7 cut(s) 49, 77, 752, 865, 995, 1337, 1562
Tru1I TTAA 8 cut(s) 615, 1221, 1368, 1682, 1767, 1904, 2006, 2537
Tru9I TTAA 8 cut(s) 615, 1221, 1368, 1682, 1767, 1904, 2006, 2537
TscAI CASTG 2 cut(s) 1779, 2494
TseFI GTSAC 1 cut(s) 2514
TseI GCWGC 4 cut(s) 1078, 1287, 1344, 2462
Tsp45I GTSAC 1 cut(s) 2514
TspGWI ACGGA 2 cut(s) 61, 2076
TspMI CCCGGG 1 cut(s) 1861
TspRI CASTG 2 cut(s) 1779, 2494
VpaK11BI GGWCC 2 cut(s) 2261, 2318
VspI ATTAAT 1 cut(s) 2537
XapI RAATTY 4 cut(s) 710, 1131, 1236, 1975
XceI RCATGY 1 cut(s) 2469
XcmI CCANNNNNNNNNTGG 1 cut(s) 2311
XmaI CCCGGG 1 cut(s) 1861
XmiI GTMKAC 1 cut(s) 1636
XspI CTAG 5 cut(s) 116, 567, 1280, 2214, 2459
ZrmI AGTACT 1 cut(s) 1996
Zsp2I ATGCAT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.