No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 225 - 289 | 4.2e-08 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 607 |
| Acc36I | ACCTGC | 1 cut(s) | 109 |
| Acc65I | GGTACC | 1 cut(s) | 383 |
| AccB1I | GGYRCC | 2 cut(s) | 383, 642 |
| AccBSI | CCGCTC | 1 cut(s) | 112 |
| AccII | CGCG | 1 cut(s) | 807 |
| AciI | CCGC | 3 cut(s) | 112, 647, 764 |
| AclWI | GGATC | 3 cut(s) | 56, 671, 1061 |
| AcoI | YGGCCR | 1 cut(s) | 73 |
| AcsI | RAATTY | 4 cut(s) | 63, 875, 949, 987 |
| AcuI | CTGAAG | 1 cut(s) | 126 |
| AcyI | GRCGYC | 2 cut(s) | 604, 643 |
| AfaI | GTAC | 1 cut(s) | 385 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 706 |
| AgsI | TTSAA | 7 cut(s) | 185, 326, 338, 524, 771, 1030, 1043 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 75 |
| AluBI | AGCT | 2 cut(s) | 351, 571 |
| AluI | AGCT | 2 cut(s) | 351, 571 |
| Alw21I | GWGCWC | 2 cut(s) | 308, 598 |
| Alw26I | GTCTC | 1 cut(s) | 91 |
| AlwI | GGATC | 3 cut(s) | 56, 671, 1061 |
| AoxI | GGCC | 2 cut(s) | 73, 1023 |
| ApeKI | GCWGC | 3 cut(s) | 274, 686, 710 |
| ApoI | RAATTY | 4 cut(s) | 63, 875, 949, 987 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 976 |
| Asp718I | GGTACC | 1 cut(s) | 383 |
| AspLEI | GCGC | 2 cut(s) | 645, 809 |
| AsuHPI | GGTGA | 1 cut(s) | 10 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 375, 408 |
| BanI | GGYRCC | 2 cut(s) | 383, 642 |
| BauI | CACGAG | 1 cut(s) | 597 |
| BbsI | GAAGAC | 1 cut(s) | 979 |
| Bbv12I | GWGCWC | 2 cut(s) | 308, 598 |
| BbvI | GCAGC | 3 cut(s) | 286, 673, 697 |
| BccI | CCATC | 3 cut(s) | 120, 130, 674 |
| BceAI | ACGGC | 1 cut(s) | 60 |
| BcoDI | GTCTC | 1 cut(s) | 91 |
| BfaI | CTAG | 1 cut(s) | 995 |
| BfmI | CTRYAG | 1 cut(s) | 1086 |
| BfoI | RGCGCY | 1 cut(s) | 646 |
| BfuAI | ACCTGC | 1 cut(s) | 109 |
| BisI | GCNGC | 3 cut(s) | 275, 687, 711 |
| BlsI | GCNGC | 3 cut(s) | 276, 688, 712 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 75 |
| BmiI | GGNNCC | 4 cut(s) | 385, 618, 644, 697 |
| BmsI | GCATC | 4 cut(s) | 305, 784, 791, 1081 |
| BpiI | GAAGAC | 1 cut(s) | 979 |
| Bpu10I | CCTNAGC | 1 cut(s) | 612 |
| BpuEI | CTTGAG | 1 cut(s) | 944 |
| BsaHI | GRCGYC | 2 cut(s) | 604, 643 |
| BsaI | GGTCTC | 1 cut(s) | 91 |
| BsaJI | CCNNGG | 1 cut(s) | 700 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 706 |
| Bse1I | ACTGG | 4 cut(s) | 76, 83, 179, 965 |
| BseDI | CCNNGG | 1 cut(s) | 700 |
| BseGI | GGATG | 1 cut(s) | 799 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 706 |
| BseMII | CTCAG | 1 cut(s) | 668 |
| BseNI | ACTGG | 4 cut(s) | 76, 83, 179, 965 |
| BseXI | GCAGC | 3 cut(s) | 286, 673, 697 |
| Bsh1236I | CGCG | 1 cut(s) | 807 |
| BshFI | GGCC | 2 cut(s) | 75, 1025 |
| BshNI | GGYRCC | 2 cut(s) | 383, 642 |
| BsiHKAI | GWGCWC | 2 cut(s) | 308, 598 |
| BsiSI | CCGG | 1 cut(s) | 543 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 706 |
| BsmAI | GTCTC | 1 cut(s) | 91 |
| BsmI | GAATGC | 2 cut(s) | 576, 850 |
| BsnI | GGCC | 2 cut(s) | 75, 1025 |
| Bso31I | GGTCTC | 1 cut(s) | 91 |
| Bsp1286I | GDGCHC | 2 cut(s) | 308, 598 |
| Bsp143I | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| BspACI | CCGC | 3 cut(s) | 112, 647, 764 |
| BspANI | GGCC | 2 cut(s) | 75, 1025 |
| BspCNI | CTCAG | 1 cut(s) | 667 |
| BspFNI | CGCG | 1 cut(s) | 807 |
| BspHI | TCATGA | 1 cut(s) | 466 |
| BspLI | GGNNCC | 4 cut(s) | 385, 618, 644, 697 |
| BspMI | ACCTGC | 1 cut(s) | 109 |
| BspPI | GGATC | 3 cut(s) | 56, 671, 1061 |
| BspQI | GCTCTTC | 2 cut(s) | 102, 561 |
| BspT107I | GGYRCC | 2 cut(s) | 383, 642 |
| BspTNI | GGTCTC | 1 cut(s) | 91 |
| BsrBI | CCGCTC | 1 cut(s) | 112 |
| BsrI | ACTGG | 4 cut(s) | 76, 83, 179, 965 |
| BssECI | CCNNGG | 1 cut(s) | 700 |
| BssMI | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| BssNI | GRCGYC | 2 cut(s) | 604, 643 |
| BssSI | CACGAG | 1 cut(s) | 597 |
| BssT1I | CCWWGG | 1 cut(s) | 700 |
| Bst2BI | CACGAG | 1 cut(s) | 597 |
| Bst4CI | ACNGT | 1 cut(s) | 121 |
| Bst6I | CTCTTC | 2 cut(s) | 102, 561 |
| BstACI | GRCGYC | 2 cut(s) | 604, 643 |
| BstC8I | GCNNGC | 3 cut(s) | 444, 448, 647 |
| BstDEI | CTNAG | 2 cut(s) | 612, 654 |
| BstF5I | GGATG | 1 cut(s) | 799 |
| BstFNI | CGCG | 1 cut(s) | 807 |
| BstH2I | RGCGCY | 1 cut(s) | 646 |
| BstHHI | GCGC | 2 cut(s) | 645, 809 |
| BstKTI | GATC | 5 cut(s) | 51, 268, 666, 1069, 1128 |
| BstMAI | GTCTC | 1 cut(s) | 91 |
| BstMBI | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 452 |
| BstNSI | RCATGY | 1 cut(s) | 446 |
| BstSFI | CTRYAG | 1 cut(s) | 1086 |
| BstUI | CGCG | 1 cut(s) | 807 |
| BstV1I | GCAGC | 3 cut(s) | 286, 673, 697 |
| BstV2I | GAAGAC | 1 cut(s) | 979 |
| BstX2I | RGATCY | 1 cut(s) | 48 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 186 |
| BstYI | RGATCY | 1 cut(s) | 48 |
| BsuRI | GGCC | 2 cut(s) | 75, 1025 |
| BtsCI | GGATG | 1 cut(s) | 799 |
| BtsIMutI | CAGTG | 1 cut(s) | 90 |
| BveI | ACCTGC | 1 cut(s) | 109 |
| Cac8I | GCNNGC | 3 cut(s) | 444, 448, 647 |
| CciI | TCATGA | 1 cut(s) | 466 |
| CfoI | GCGC | 2 cut(s) | 645, 809 |
| Csp6I | GTAC | 1 cut(s) | 384 |
| CviAII | CATG | 4 cut(s) | 245, 443, 467, 818 |
| CviJI | RGCY | 8 cut(s) | 75, 351, 546, 571, 617, 710, 777, 1025 |
| CviKI_1 | RGCY | 8 cut(s) | 75, 351, 546, 571, 617, 710, 777, 1025 |
| CviQI | GTAC | 1 cut(s) | 384 |
| DdeI | CTNAG | 2 cut(s) | 612, 654 |
| DinI | GGCGCC | 1 cut(s) | 644 |
| DpnI | GATC | 5 cut(s) | 50, 267, 665, 1068, 1127 |
| DpnII | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| DriI | GACNNNNNGTC | 1 cut(s) | 75 |
| EaeI | YGGCCR | 1 cut(s) | 73 |
| Eam1104I | CTCTTC | 2 cut(s) | 102, 561 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 75 |
| EarI | CTCTTC | 2 cut(s) | 102, 561 |
| Eco130I | CCWWGG | 1 cut(s) | 700 |
| Eco147I | AGGCCT | 1 cut(s) | 1025 |
| Eco31I | GGTCTC | 1 cut(s) | 91 |
| Eco57I | CTGAAG | 1 cut(s) | 126 |
| EcoT14I | CCWWGG | 1 cut(s) | 700 |
| EgeI | GGCGCC | 1 cut(s) | 644 |
| EheI | GGCGCC | 1 cut(s) | 644 |
| ErhI | CCWWGG | 1 cut(s) | 700 |
| FaeI | CATG | 4 cut(s) | 248, 446, 470, 821 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 684, 716 |
| FatI | CATG | 4 cut(s) | 244, 442, 466, 817 |
| FauI | CCCGC | 3 cut(s) | 105, 654, 757 |
| Fnu4HI | GCNGC | 3 cut(s) | 275, 687, 711 |
| FokI | GGATG | 1 cut(s) | 806 |
| Fsp4HI | GCNGC | 3 cut(s) | 275, 687, 711 |
| FspBI | CTAG | 1 cut(s) | 995 |
| GlaI | GCGC | 2 cut(s) | 644, 808 |
| GluI | GCNGC | 3 cut(s) | 275, 687, 711 |
| HaeII | RGCGCY | 1 cut(s) | 646 |
| HaeIII | GGCC | 2 cut(s) | 75, 1025 |
| HapII | CCGG | 1 cut(s) | 543 |
| HhaI | GCGC | 2 cut(s) | 645, 809 |
| Hin1I | GRCGYC | 2 cut(s) | 604, 643 |
| Hin1II | CATG | 4 cut(s) | 248, 446, 470, 821 |
| Hin6I | GCGC | 2 cut(s) | 643, 807 |
| HinP1I | GCGC | 2 cut(s) | 643, 807 |
| HincII | GTYRAC | 2 cut(s) | 258, 515 |
| HindII | GTYRAC | 2 cut(s) | 258, 515 |
| HinfI | GANTC | 1 cut(s) | 530 |
| HpaI | GTTAAC | 1 cut(s) | 258 |
| HpaII | CCGG | 1 cut(s) | 543 |
| HphI | GGTGA | 1 cut(s) | 10 |
| Hpy166II | GTNNAC | 5 cut(s) | 37, 258, 515, 602, 980 |
| Hpy188I | TCNGA | 3 cut(s) | 125, 135, 1104 |
| Hpy188III | TCNNGA | 6 cut(s) | 46, 338, 467, 731, 923, 1030 |
| Hpy8I | GTNNAC | 5 cut(s) | 37, 258, 515, 602, 980 |
| Hpy99I | CGWCG | 1 cut(s) | 81 |
| HpyAV | CCTTC | 6 cut(s) | 466, 660, 1036, 1037, 1042, 1072 |
| HpyCH4III | ACNGT | 1 cut(s) | 121 |
| HpyCH4IV | ACGT | 4 cut(s) | 283, 604, 933, 976 |
| HpyCH4V | TGCA | 6 cut(s) | 274, 394, 576, 689, 713, 1094 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 452 |
| HpyF3I | CTNAG | 2 cut(s) | 612, 654 |
| HpySE526I | ACGT | 4 cut(s) | 283, 604, 933, 976 |
| Hsp92I | GRCGYC | 2 cut(s) | 604, 643 |
| Hsp92II | CATG | 4 cut(s) | 248, 446, 470, 821 |
| HspAI | GCGC | 2 cut(s) | 643, 807 |
| KasI | GGCGCC | 1 cut(s) | 642 |
| KpnI | GGTACC | 1 cut(s) | 387 |
| KspAI | GTTAAC | 1 cut(s) | 258 |
| Kzo9I | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| LguI | GCTCTTC | 2 cut(s) | 102, 561 |
| LmnI | GCTCC | 1 cut(s) | 622 |
| LpnPI | CCDG | 7 cut(s) | 57, 96, 114, 192, 556, 621, 978 |
| Lsp1109I | GCAGC | 3 cut(s) | 286, 673, 697 |
| LweI | GCATC | 4 cut(s) | 305, 784, 791, 1081 |
| MaeI | CTAG | 1 cut(s) | 995 |
| MaeII | ACGT | 4 cut(s) | 283, 604, 933, 976 |
| MaeIII | GTNAC | 2 cut(s) | 115, 223 |
| MalI | GATC | 5 cut(s) | 50, 267, 665, 1068, 1127 |
| MbiI | CCGCTC | 1 cut(s) | 112 |
| MboI | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| MboII | GAAGA | 6 cut(s) | 119, 565, 572, 578, 777, 984 |
| MflI | RGATCY | 1 cut(s) | 48 |
| MhlI | GDGCHC | 2 cut(s) | 308, 598 |
| Mly113I | GGCGCC | 1 cut(s) | 643 |
| MmeI | TCCRAC | 1 cut(s) | 949 |
| MnlI | CCTC | 4 cut(s) | 222, 625, 930, 1090 |
| MroXI | GAANNNNTTC | 1 cut(s) | 976 |
| MseI | TTAA | 5 cut(s) | 93, 162, 257, 893, 1020 |
| MslI | CAYNNNNRTG | 1 cut(s) | 301 |
| MspI | CCGG | 1 cut(s) | 543 |
| Mva1269I | GAATGC | 2 cut(s) | 576, 850 |
| MvnI | CGCG | 1 cut(s) | 807 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 452 |
| NarI | GGCGCC | 1 cut(s) | 643 |
| NdeII | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| NlaIII | CATG | 4 cut(s) | 248, 446, 470, 821 |
| NlaIV | GGNNCC | 4 cut(s) | 385, 618, 644, 697 |
| NspI | RCATGY | 1 cut(s) | 446 |
| PaeI | GCATGC | 1 cut(s) | 446 |
| PagI | TCATGA | 1 cut(s) | 466 |
| PceI | AGGCCT | 1 cut(s) | 1025 |
| PciSI | GCTCTTC | 2 cut(s) | 102, 561 |
| PctI | GAATGC | 2 cut(s) | 576, 850 |
| PdmI | GAANNNNTTC | 1 cut(s) | 976 |
| PfeI | GAWTC | 1 cut(s) | 530 |
| PkrI | GCNGC | 3 cut(s) | 276, 688, 712 |
| PluTI | GGCGCC | 1 cut(s) | 646 |
| PspN4I | GGNNCC | 4 cut(s) | 385, 618, 644, 697 |
| PsuI | RGATCY | 1 cut(s) | 48 |
| RsaI | GTAC | 1 cut(s) | 385 |
| RsaNI | GTAC | 1 cut(s) | 384 |
| RseI | CAYNNNNRTG | 1 cut(s) | 301 |
| SapI | GCTCTTC | 2 cut(s) | 102, 561 |
| SaqAI | TTAA | 5 cut(s) | 93, 162, 257, 893, 1020 |
| SatI | GCNGC | 3 cut(s) | 275, 687, 711 |
| Sau3AI | GATC | 5 cut(s) | 48, 265, 663, 1066, 1125 |
| SduI | GDGCHC | 2 cut(s) | 308, 598 |
| SfaNI | GCATC | 4 cut(s) | 305, 784, 791, 1081 |
| SfcI | CTRYAG | 1 cut(s) | 1086 |
| SfoI | GGCGCC | 1 cut(s) | 644 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 301 |
| SmlI | CTYRAG | 1 cut(s) | 923 |
| SmoI | CTYRAG | 1 cut(s) | 923 |
| SphI | GCATGC | 1 cut(s) | 446 |
| SseBI | AGGCCT | 1 cut(s) | 1025 |
| SsiI | CCGC | 3 cut(s) | 112, 647, 764 |
| SspDI | GGCGCC | 1 cut(s) | 642 |
| SspI | AATATT | 1 cut(s) | 329 |
| SspMI | CTAG | 1 cut(s) | 995 |
| StuI | AGGCCT | 1 cut(s) | 1025 |
| StyI | CCWWGG | 1 cut(s) | 700 |
| TaaI | ACNGT | 1 cut(s) | 121 |
| TaiI | ACGT | 4 cut(s) | 286, 607, 936, 979 |
| TaqI | TCGA | 1 cut(s) | 913 |
| TfiI | GAWTC | 1 cut(s) | 530 |
| Tru1I | TTAA | 5 cut(s) | 93, 162, 257, 893, 1020 |
| Tru9I | TTAA | 5 cut(s) | 93, 162, 257, 893, 1020 |
| TscAI | CASTG | 1 cut(s) | 90 |
| TseI | GCWGC | 3 cut(s) | 274, 686, 710 |
| TspDTI | ATGAA | 7 cut(s) | 17, 455, 566, 572, 806, 1027, 1091 |
| TspRI | CASTG | 1 cut(s) | 90 |
| XapI | RAATTY | 4 cut(s) | 63, 875, 949, 987 |
| XceI | RCATGY | 1 cut(s) | 446 |
| XmnI | GAANNNNTTC | 1 cut(s) | 976 |
| XspI | CTAG | 1 cut(s) | 995 |
| ZraI | GACGTC | 1 cut(s) | 605 |