ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 164, 428 |
| AcsI | RAATTY | 1 cut(s) | 117 |
| AcuI | CTGAAG | 1 cut(s) | 195 |
| AfaI | GTAC | 2 cut(s) | 299, 304 |
| AgsI | TTSAA | 2 cut(s) | 116, 242 |
| AjnI | CCWGG | 1 cut(s) | 92 |
| AluBI | AGCT | 2 cut(s) | 100, 220 |
| AluI | AGCT | 2 cut(s) | 100, 220 |
| Alw26I | GTCTC | 1 cut(s) | 388 |
| AlwI | GGATC | 2 cut(s) | 164, 428 |
| ApoI | RAATTY | 1 cut(s) | 117 |
| AseI | ATTAAT | 1 cut(s) | 81 |
| AsuHPI | GGTGA | 2 cut(s) | 192, 227 |
| BccI | CCATC | 1 cut(s) | 211 |
| BciT130I | CCWGG | 1 cut(s) | 94 |
| BcoDI | GTCTC | 1 cut(s) | 388 |
| BfaI | CTAG | 2 cut(s) | 72, 431 |
| Bme1390I | CCNGG | 1 cut(s) | 94 |
| BmiI | GGNNCC | 3 cut(s) | 91, 156, 475 |
| BmrFI | CCNGG | 1 cut(s) | 94 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| Bse3DI | GCAATG | 1 cut(s) | 447 |
| BseBI | CCWGG | 1 cut(s) | 94 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseMI | GCAATG | 1 cut(s) | 447 |
| BseRI | GAGGAG | 1 cut(s) | 393 |
| BsmAI | GTCTC | 1 cut(s) | 388 |
| Bsp143I | GATC | 2 cut(s) | 169, 433 |
| BspLI | GGNNCC | 3 cut(s) | 91, 156, 475 |
| BspPI | GGATC | 2 cut(s) | 164, 428 |
| BsrDI | GCAATG | 1 cut(s) | 447 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssMI | GATC | 2 cut(s) | 169, 433 |
| Bst2UI | CCWGG | 1 cut(s) | 94 |
| Bst4CI | ACNGT | 1 cut(s) | 302 |
| BstEII | GGTNACC | 1 cut(s) | 198 |
| BstKTI | GATC | 2 cut(s) | 172, 436 |
| BstMAI | GTCTC | 1 cut(s) | 388 |
| BstMBI | GATC | 2 cut(s) | 169, 433 |
| BstNI | CCWGG | 1 cut(s) | 94 |
| BstPI | GGTNACC | 1 cut(s) | 198 |
| BstSCI | CCNGG | 1 cut(s) | 92 |
| BstX2I | RGATCY | 1 cut(s) | 433 |
| BstYI | RGATCY | 1 cut(s) | 433 |
| Csp6I | GTAC | 2 cut(s) | 298, 303 |
| CviAII | CATG | 4 cut(s) | 86, 327, 463, 480 |
| CviJI | RGCY | 4 cut(s) | 10, 71, 100, 220 |
| CviKI_1 | RGCY | 4 cut(s) | 10, 71, 100, 220 |
| CviQI | GTAC | 2 cut(s) | 298, 303 |
| DpnI | GATC | 2 cut(s) | 171, 435 |
| DpnII | GATC | 2 cut(s) | 169, 433 |
| Eco57I | CTGAAG | 1 cut(s) | 195 |
| Eco91I | GGTNACC | 1 cut(s) | 198 |
| EcoO65I | GGTNACC | 1 cut(s) | 198 |
| EcoRII | CCWGG | 1 cut(s) | 92 |
| EcoT22I | ATGCAT | 1 cut(s) | 287 |
| FaeI | CATG | 4 cut(s) | 89, 330, 466, 483 |
| FaiI | YATR | 8 cut(s) | 68, 87, 196, 314, 328, 439, 464, 481 |
| FatI | CATG | 4 cut(s) | 85, 326, 462, 479 |
| FspBI | CTAG | 2 cut(s) | 72, 431 |
| Hin1II | CATG | 4 cut(s) | 89, 330, 466, 483 |
| HinfI | GANTC | 4 cut(s) | 62, 381, 425, 467 |
| HphI | GGTGA | 2 cut(s) | 192, 227 |
| Hpy188III | TCNNGA | 2 cut(s) | 431, 471 |
| HpyAV | CCTTC | 1 cut(s) | 325 |
| HpyCH4III | ACNGT | 1 cut(s) | 302 |
| HpyCH4V | TGCA | 4 cut(s) | 131, 285, 370, 460 |
| Hsp92II | CATG | 4 cut(s) | 89, 330, 466, 483 |
| Kzo9I | GATC | 2 cut(s) | 169, 433 |
| LmnI | GCTCC | 1 cut(s) | 97 |
| LpnPI | CCDG | 5 cut(s) | 79, 106, 141, 198, 456 |
| MaeI | CTAG | 2 cut(s) | 72, 431 |
| MaeIII | GTNAC | 1 cut(s) | 198 |
| MalI | GATC | 2 cut(s) | 171, 435 |
| MboI | GATC | 2 cut(s) | 169, 433 |
| MboII | GAAGA | 3 cut(s) | 198, 201, 436 |
| MflI | RGATCY | 1 cut(s) | 433 |
| MluCI | AATT | 5 cut(s) | 107, 117, 230, 242, 418 |
| MlyI | GAGTC | 2 cut(s) | 71, 390 |
| MnlI | CCTC | 2 cut(s) | 318, 371 |
| Mph1103I | ATGCAT | 1 cut(s) | 287 |
| MseI | TTAA | 5 cut(s) | 57, 81, 266, 338, 417 |
| MslI | CAYNNNNRTG | 1 cut(s) | 193 |
| MspR9I | CCNGG | 1 cut(s) | 94 |
| MvaI | CCWGG | 1 cut(s) | 94 |
| NdeII | GATC | 2 cut(s) | 169, 433 |
| NlaIII | CATG | 4 cut(s) | 89, 330, 466, 483 |
| NlaIV | GGNNCC | 3 cut(s) | 91, 156, 475 |
| NmuCI | GTSAC | 1 cut(s) | 198 |
| NsiI | ATGCAT | 1 cut(s) | 287 |
| PfeI | GAWTC | 2 cut(s) | 425, 467 |
| PleI | GAGTC | 2 cut(s) | 70, 389 |
| PpsI | GAGTC | 2 cut(s) | 70, 389 |
| PshBI | ATTAAT | 1 cut(s) | 81 |
| Psp6I | CCWGG | 1 cut(s) | 92 |
| PspEI | GGTNACC | 1 cut(s) | 198 |
| PspGI | CCWGG | 1 cut(s) | 92 |
| PspN4I | GGNNCC | 3 cut(s) | 91, 156, 475 |
| PsuI | RGATCY | 1 cut(s) | 433 |
| RsaI | GTAC | 2 cut(s) | 299, 304 |
| RsaNI | GTAC | 2 cut(s) | 298, 303 |
| RseI | CAYNNNNRTG | 1 cut(s) | 193 |
| SaqAI | TTAA | 5 cut(s) | 57, 81, 266, 338, 417 |
| Sau3AI | GATC | 2 cut(s) | 169, 433 |
| SchI | GAGTC | 2 cut(s) | 71, 390 |
| ScrFI | CCNGG | 1 cut(s) | 94 |
| SetI | ASST | 5 cut(s) | 102, 156, 217, 222, 336 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 193 |
| Sse9I | AATT | 5 cut(s) | 107, 117, 230, 242, 418 |
| SspMI | CTAG | 2 cut(s) | 72, 431 |
| StyD4I | CCNGG | 1 cut(s) | 92 |
| TaaI | ACNGT | 1 cut(s) | 302 |
| TaqI | TCGA | 1 cut(s) | 293 |
| TasI | AATT | 5 cut(s) | 107, 117, 230, 242, 418 |
| TatI | WGTACW | 1 cut(s) | 297 |
| TfiI | GAWTC | 2 cut(s) | 425, 467 |
| Tru1I | TTAA | 5 cut(s) | 57, 81, 266, 338, 417 |
| Tru9I | TTAA | 5 cut(s) | 57, 81, 266, 338, 417 |
| TseFI | GTSAC | 1 cut(s) | 198 |
| Tsp45I | GTSAC | 1 cut(s) | 198 |
| TspDTI | ATGAA | 2 cut(s) | 67, 436 |
| VspI | ATTAAT | 1 cut(s) | 81 |
| XapI | RAATTY | 1 cut(s) | 117 |
| XbaI | TCTAGA | 1 cut(s) | 430 |
| XspI | CTAG | 2 cut(s) | 72, 431 |
| Zsp2I | ATGCAT | 1 cut(s) | 287 |