ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 91 |
| AfaI | GTAC | 1 cut(s) | 76 |
| AflIII | ACRYGT | 1 cut(s) | 17 |
| AjnI | CCWGG | 1 cut(s) | 156 |
| AluBI | AGCT | 4 cut(s) | 28, 238, 257, 281 |
| AluI | AGCT | 4 cut(s) | 28, 238, 257, 281 |
| AoxI | GGCC | 2 cut(s) | 47, 271 |
| ApeKI | GCWGC | 2 cut(s) | 98, 278 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuC2I | CCSGG | 1 cut(s) | 114 |
| AsuHPI | GGTGA | 1 cut(s) | 62 |
| BbvI | GCAGC | 2 cut(s) | 85, 290 |
| BccI | CCATC | 1 cut(s) | 242 |
| BciT130I | CCWGG | 1 cut(s) | 158 |
| BcnI | CCSGG | 1 cut(s) | 114 |
| BfaI | CTAG | 1 cut(s) | 149 |
| BfmI | CTRYAG | 1 cut(s) | 276 |
| BisI | GCNGC | 2 cut(s) | 99, 279 |
| BlsI | GCNGC | 2 cut(s) | 100, 280 |
| Bme1390I | CCNGG | 2 cut(s) | 114, 158 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmrFI | CCNGG | 2 cut(s) | 114, 158 |
| BmsI | GCATC | 1 cut(s) | 220 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 37, 69 |
| BpuMI | CCSGG | 1 cut(s) | 114 |
| BsaAI | YACGTR | 1 cut(s) | 20 |
| BsaJI | CCNNGG | 4 cut(s) | 124, 157, 194, 227 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| BseBI | CCWGG | 1 cut(s) | 158 |
| BseDI | CCNNGG | 4 cut(s) | 124, 157, 194, 227 |
| BseGI | GGATG | 1 cut(s) | 211 |
| BseMII | CTCAG | 1 cut(s) | 155 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BseRI | GAGGAG | 1 cut(s) | 183 |
| BseXI | GCAGC | 2 cut(s) | 85, 290 |
| BsgI | GTGCAG | 1 cut(s) | 84 |
| BshFI | GGCC | 2 cut(s) | 49, 273 |
| BsiSI | CCGG | 1 cut(s) | 114 |
| BsnI | GGCC | 2 cut(s) | 49, 273 |
| BspACI | CCGC | 1 cut(s) | 91 |
| BspANI | GGCC | 2 cut(s) | 49, 273 |
| BspCNI | CTCAG | 1 cut(s) | 154 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| BssECI | CCNNGG | 4 cut(s) | 124, 157, 194, 227 |
| BssT1I | CCWWGG | 1 cut(s) | 227 |
| Bst2UI | CCWGG | 1 cut(s) | 158 |
| Bst4CI | ACNGT | 1 cut(s) | 74 |
| BstBAI | YACGTR | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 1 cut(s) | 178 |
| BstDEI | CTNAG | 1 cut(s) | 141 |
| BstDSI | CCRYGG | 1 cut(s) | 124 |
| BstF5I | GGATG | 1 cut(s) | 211 |
| BstNI | CCWGG | 1 cut(s) | 158 |
| BstSCI | CCNGG | 2 cut(s) | 112, 156 |
| BstSFI | CTRYAG | 1 cut(s) | 276 |
| BstV1I | GCAGC | 2 cut(s) | 85, 290 |
| BsuRI | GGCC | 2 cut(s) | 49, 273 |
| BtgI | CCRYGG | 1 cut(s) | 124 |
| BtsCI | GGATG | 1 cut(s) | 211 |
| BtsIMutI | CAGTG | 1 cut(s) | 243 |
| Cac8I | GCNNGC | 1 cut(s) | 178 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| Csp6I | GTAC | 1 cut(s) | 75 |
| CviJI | RGCY | 8 cut(s) | 5, 28, 49, 156, 238, 257, 273, 281 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 28, 49, 156, 238, 257, 273, 281 |
| CviQI | GTAC | 1 cut(s) | 75 |
| DdeI | CTNAG | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 1 cut(s) | 227 |
| Eco147I | AGGCCT | 1 cut(s) | 49 |
| EcoRII | CCWGG | 1 cut(s) | 156 |
| EcoT14I | CCWWGG | 1 cut(s) | 227 |
| ErhI | CCWWGG | 1 cut(s) | 227 |
| FaiI | YATR | 2 cut(s) | 42, 59 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 252, 284 |
| Fnu4HI | GCNGC | 2 cut(s) | 99, 279 |
| FokI | GGATG | 1 cut(s) | 198 |
| Fsp4HI | GCNGC | 2 cut(s) | 99, 279 |
| FspBI | CTAG | 1 cut(s) | 149 |
| GluI | GCNGC | 2 cut(s) | 99, 279 |
| HaeIII | GGCC | 2 cut(s) | 49, 273 |
| HapII | CCGG | 1 cut(s) | 114 |
| HindIII | AAGCTT | 2 cut(s) | 26, 236 |
| HinfI | GANTC | 2 cut(s) | 137, 162 |
| HpaII | CCGG | 1 cut(s) | 114 |
| HphI | GGTGA | 1 cut(s) | 62 |
| HpyAV | CCTTC | 1 cut(s) | 60 |
| HpyCH4III | ACNGT | 1 cut(s) | 74 |
| HpyCH4IV | ACGT | 1 cut(s) | 19 |
| HpyCH4V | TGCA | 3 cut(s) | 101, 278, 307 |
| HpyF3I | CTNAG | 1 cut(s) | 141 |
| HpySE526I | ACGT | 1 cut(s) | 19 |
| LmnI | GCTCC | 1 cut(s) | 196 |
| LpnPI | CCDG | 5 cut(s) | 127, 143, 170, 183, 288 |
| Lsp1109I | GCAGC | 2 cut(s) | 85, 290 |
| LweI | GCATC | 1 cut(s) | 220 |
| MaeI | CTAG | 1 cut(s) | 149 |
| MaeII | ACGT | 1 cut(s) | 19 |
| MmeI | TCCRAC | 2 cut(s) | 114, 190 |
| MnlI | CCTC | 4 cut(s) | 39, 114, 204, 319 |
| MseI | TTAA | 3 cut(s) | 36, 234, 240 |
| MspI | CCGG | 1 cut(s) | 114 |
| MspR9I | CCNGG | 2 cut(s) | 114, 158 |
| MvaI | CCWGG | 1 cut(s) | 158 |
| NciI | CCSGG | 1 cut(s) | 114 |
| PceI | AGGCCT | 1 cut(s) | 49 |
| PfeI | GAWTC | 2 cut(s) | 137, 162 |
| PkrI | GCNGC | 2 cut(s) | 100, 280 |
| Ppu21I | YACGTR | 1 cut(s) | 20 |
| Psp6I | CCWGG | 1 cut(s) | 156 |
| PspGI | CCWGG | 1 cut(s) | 156 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| RsaI | GTAC | 1 cut(s) | 76 |
| RsaNI | GTAC | 1 cut(s) | 75 |
| SaqAI | TTAA | 3 cut(s) | 36, 234, 240 |
| SatI | GCNGC | 2 cut(s) | 99, 279 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| ScrFI | CCNGG | 2 cut(s) | 114, 158 |
| SetI | ASST | 9 cut(s) | 22, 30, 106, 240, 259, 265, 283, 330, 342 |
| SfaNI | GCATC | 1 cut(s) | 220 |
| SfcI | CTRYAG | 1 cut(s) | 276 |
| SseBI | AGGCCT | 1 cut(s) | 49 |
| SsiI | CCGC | 1 cut(s) | 91 |
| SspI | AATATT | 1 cut(s) | 319 |
| SspMI | CTAG | 1 cut(s) | 149 |
| StuI | AGGCCT | 1 cut(s) | 49 |
| StyD4I | CCNGG | 2 cut(s) | 112, 156 |
| StyI | CCWWGG | 1 cut(s) | 227 |
| TaaI | ACNGT | 1 cut(s) | 74 |
| TaiI | ACGT | 1 cut(s) | 22 |
| TfiI | GAWTC | 2 cut(s) | 137, 162 |
| Tru1I | TTAA | 3 cut(s) | 36, 234, 240 |
| Tru9I | TTAA | 3 cut(s) | 36, 234, 240 |
| TscAI | CASTG | 1 cut(s) | 250 |
| TseI | GCWGC | 2 cut(s) | 98, 278 |
| TspRI | CASTG | 1 cut(s) | 250 |
| XspI | CTAG | 1 cut(s) | 149 |