ribonuclease H protein At1g65750-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 3 - 95 | 1.5e-16 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 300 |
| AcsI | RAATTY | 1 cut(s) | 373 |
| AcyI | GRCGYC | 1 cut(s) | 175 |
| AfaI | GTAC | 1 cut(s) | 205 |
| AgsI | TTSAA | 2 cut(s) | 56, 78 |
| AluBI | AGCT | 4 cut(s) | 52, 278, 341, 387 |
| AluI | AGCT | 4 cut(s) | 52, 278, 341, 387 |
| AlwI | GGATC | 1 cut(s) | 300 |
| ApeKI | GCWGC | 1 cut(s) | 341 |
| ApoI | RAATTY | 1 cut(s) | 373 |
| BbvI | GCAGC | 1 cut(s) | 328 |
| BccI | CCATC | 1 cut(s) | 90 |
| BfaI | CTAG | 1 cut(s) | 41 |
| BisI | GCNGC | 1 cut(s) | 342 |
| BlpI | GCTNAGC | 1 cut(s) | 274 |
| BlsI | GCNGC | 1 cut(s) | 343 |
| BmiI | GGNNCC | 1 cut(s) | 19 |
| BmsI | GCATC | 2 cut(s) | 92, 344 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 274 |
| BsaHI | GRCGYC | 1 cut(s) | 175 |
| BsaJI | CCNNGG | 2 cut(s) | 21, 170 |
| BseDI | CCNNGG | 2 cut(s) | 21, 170 |
| BseGI | GGATG | 1 cut(s) | 101 |
| BseMII | CTCAG | 1 cut(s) | 177 |
| BseRI | GAGGAG | 1 cut(s) | 205 |
| BseXI | GCAGC | 1 cut(s) | 328 |
| BslFI | GGGAC | 2 cut(s) | 152, 329 |
| BsmFI | GGGAC | 2 cut(s) | 152, 329 |
| Bsp143I | GATC | 1 cut(s) | 292 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 274 |
| BspCNI | CTCAG | 1 cut(s) | 176 |
| BspHI | TCATGA | 1 cut(s) | 295 |
| BspLI | GGNNCC | 1 cut(s) | 19 |
| BspPI | GGATC | 1 cut(s) | 300 |
| BssECI | CCNNGG | 2 cut(s) | 21, 170 |
| BssMI | GATC | 1 cut(s) | 292 |
| BssNI | GRCGYC | 1 cut(s) | 175 |
| BssT1I | CCWWGG | 2 cut(s) | 21, 170 |
| BstACI | GRCGYC | 1 cut(s) | 175 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 341 |
| BstDEI | CTNAG | 3 cut(s) | 163, 179, 274 |
| BstEII | GGTNACC | 1 cut(s) | 366 |
| BstF5I | GGATG | 1 cut(s) | 101 |
| BstKTI | GATC | 1 cut(s) | 295 |
| BstMBI | GATC | 1 cut(s) | 292 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 44, 341 |
| BstPI | GGTNACC | 1 cut(s) | 366 |
| BstV1I | GCAGC | 1 cut(s) | 328 |
| BtsCI | GGATG | 1 cut(s) | 101 |
| CciI | TCATGA | 1 cut(s) | 295 |
| CseI | GACGC | 1 cut(s) | 164 |
| Csp6I | GTAC | 1 cut(s) | 204 |
| CviAII | CATG | 2 cut(s) | 68, 296 |
| CviJI | RGCY | 6 cut(s) | 52, 59, 266, 278, 341, 387 |
| CviKI_1 | RGCY | 6 cut(s) | 52, 59, 266, 278, 341, 387 |
| CviQI | GTAC | 1 cut(s) | 204 |
| DdeI | CTNAG | 3 cut(s) | 163, 179, 274 |
| DpnI | GATC | 1 cut(s) | 294 |
| DpnII | GATC | 1 cut(s) | 292 |
| Eco130I | CCWWGG | 2 cut(s) | 21, 170 |
| Eco91I | GGTNACC | 1 cut(s) | 366 |
| EcoO65I | GGTNACC | 1 cut(s) | 366 |
| EcoT14I | CCWWGG | 2 cut(s) | 21, 170 |
| ErhI | CCWWGG | 2 cut(s) | 21, 170 |
| FaeI | CATG | 2 cut(s) | 71, 299 |
| FaiI | YATR | 5 cut(s) | 69, 221, 240, 285, 297 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 36, 68 |
| FaqI | GGGAC | 2 cut(s) | 152, 329 |
| FatI | CATG | 2 cut(s) | 67, 295 |
| Fnu4HI | GCNGC | 1 cut(s) | 342 |
| FokI | GGATG | 1 cut(s) | 108 |
| Fsp4HI | GCNGC | 1 cut(s) | 342 |
| FspBI | CTAG | 1 cut(s) | 41 |
| GluI | GCNGC | 1 cut(s) | 342 |
| HgaI | GACGC | 1 cut(s) | 164 |
| Hin1I | GRCGYC | 1 cut(s) | 175 |
| Hin1II | CATG | 2 cut(s) | 71, 299 |
| HinfI | GANTC | 4 cut(s) | 122, 226, 256, 317 |
| Hpy166II | GTNNAC | 1 cut(s) | 352 |
| Hpy188III | TCNNGA | 4 cut(s) | 87, 109, 248, 296 |
| Hpy8I | GTNNAC | 1 cut(s) | 352 |
| HpyAV | CCTTC | 1 cut(s) | 245 |
| HpyCH4V | TGCA | 4 cut(s) | 71, 223, 335, 361 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 44, 341 |
| HpyF3I | CTNAG | 3 cut(s) | 163, 179, 274 |
| Hsp92I | GRCGYC | 1 cut(s) | 175 |
| Hsp92II | CATG | 2 cut(s) | 71, 299 |
| Kzo9I | GATC | 1 cut(s) | 292 |
| LpnPI | CCDG | 2 cut(s) | 72, 94 |
| Lsp1109I | GCAGC | 1 cut(s) | 328 |
| LweI | GCATC | 2 cut(s) | 92, 344 |
| MaeI | CTAG | 1 cut(s) | 41 |
| MaeIII | GTNAC | 1 cut(s) | 366 |
| MalI | GATC | 1 cut(s) | 294 |
| MboI | GATC | 1 cut(s) | 292 |
| MfeI | CAATTG | 1 cut(s) | 196 |
| MluCI | AATT | 4 cut(s) | 135, 157, 196, 373 |
| MlyI | GAGTC | 1 cut(s) | 311 |
| MnlI | CCTC | 3 cut(s) | 226, 292, 336 |
| MspA1I | CMGCKG | 1 cut(s) | 341 |
| MunI | CAATTG | 1 cut(s) | 196 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 44, 341 |
| NdeII | GATC | 1 cut(s) | 292 |
| NlaIII | CATG | 2 cut(s) | 71, 299 |
| NlaIV | GGNNCC | 1 cut(s) | 19 |
| PagI | TCATGA | 1 cut(s) | 295 |
| PfeI | GAWTC | 3 cut(s) | 122, 226, 256 |
| PkrI | GCNGC | 1 cut(s) | 343 |
| PleI | GAGTC | 1 cut(s) | 311 |
| PpsI | GAGTC | 1 cut(s) | 311 |
| PspEI | GGTNACC | 1 cut(s) | 366 |
| PspN4I | GGNNCC | 1 cut(s) | 19 |
| PvuII | CAGCTG | 1 cut(s) | 341 |
| RsaI | GTAC | 1 cut(s) | 205 |
| RsaNI | GTAC | 1 cut(s) | 204 |
| SatI | GCNGC | 1 cut(s) | 342 |
| Sau3AI | GATC | 1 cut(s) | 292 |
| SchI | GAGTC | 1 cut(s) | 311 |
| SetI | ASST | 4 cut(s) | 54, 280, 343, 389 |
| SfaNI | GCATC | 2 cut(s) | 92, 344 |
| Sse9I | AATT | 4 cut(s) | 135, 157, 196, 373 |
| SspMI | CTAG | 1 cut(s) | 41 |
| StyI | CCWWGG | 2 cut(s) | 21, 170 |
| TaqI | TCGA | 1 cut(s) | 247 |
| TasI | AATT | 4 cut(s) | 135, 157, 196, 373 |
| TfiI | GAWTC | 3 cut(s) | 122, 226, 256 |
| TseI | GCWGC | 1 cut(s) | 341 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| TspGWI | ACGGA | 1 cut(s) | 368 |
| XapI | RAATTY | 1 cut(s) | 373 |
| XspI | CTAG | 1 cut(s) | 41 |