ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 45 |
| AcsI | RAATTY | 2 cut(s) | 308, 338 |
| AcuI | CTGAAG | 1 cut(s) | 347 |
| AflII | CTTAAG | 1 cut(s) | 256 |
| AgsI | TTSAA | 1 cut(s) | 169 |
| AluBI | AGCT | 4 cut(s) | 82, 471, 582, 598 |
| AluI | AGCT | 4 cut(s) | 82, 471, 582, 598 |
| ApeKI | GCWGC | 2 cut(s) | 270, 400 |
| ApoI | RAATTY | 2 cut(s) | 308, 338 |
| AspLEI | GCGC | 1 cut(s) | 140 |
| AspS9I | GGNCC | 1 cut(s) | 178 |
| AsuHPI | GGTGA | 3 cut(s) | 142, 343, 424 |
| AvaII | GGWCC | 1 cut(s) | 178 |
| BbsI | GAAGAC | 1 cut(s) | 554 |
| BbvI | GCAGC | 2 cut(s) | 257, 387 |
| BccI | CCATC | 1 cut(s) | 534 |
| BfaI | CTAG | 2 cut(s) | 79, 232 |
| BfrI | CTTAAG | 1 cut(s) | 256 |
| BisI | GCNGC | 2 cut(s) | 271, 401 |
| BlsI | GCNGC | 2 cut(s) | 272, 402 |
| Bme18I | GGWCC | 1 cut(s) | 178 |
| BmgT120I | GGNCC | 1 cut(s) | 178 |
| BpiI | GAAGAC | 1 cut(s) | 554 |
| BpuEI | CTTGAG | 2 cut(s) | 487, 556 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 66, 96 |
| Bse1I | ACTGG | 1 cut(s) | 35 |
| BseNI | ACTGG | 1 cut(s) | 35 |
| BseXI | GCAGC | 2 cut(s) | 257, 387 |
| BseYI | CCCAGC | 1 cut(s) | 302 |
| BslFI | GGGAC | 1 cut(s) | 266 |
| BsmFI | GGGAC | 1 cut(s) | 266 |
| Bsp143I | GATC | 1 cut(s) | 554 |
| BspACI | CCGC | 1 cut(s) | 45 |
| BspTI | CTTAAG | 1 cut(s) | 256 |
| BsrI | ACTGG | 1 cut(s) | 35 |
| BssMI | GATC | 1 cut(s) | 554 |
| Bst6I | CTCTTC | 1 cut(s) | 576 |
| BstAFI | CTTAAG | 1 cut(s) | 256 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 267 |
| BstC8I | GCNNGC | 1 cut(s) | 596 |
| BstDEI | CTNAG | 1 cut(s) | 10 |
| BstHHI | GCGC | 1 cut(s) | 140 |
| BstKTI | GATC | 1 cut(s) | 557 |
| BstMBI | GATC | 1 cut(s) | 554 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 51, 267, 499, 595 |
| BstNSI | RCATGY | 1 cut(s) | 376 |
| BstV1I | GCAGC | 2 cut(s) | 257, 387 |
| BstV2I | GAAGAC | 1 cut(s) | 554 |
| Cac8I | GCNNGC | 1 cut(s) | 596 |
| CfoI | GCGC | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 178 |
| CviAII | CATG | 5 cut(s) | 16, 91, 212, 373, 635 |
| CviJI | RGCY | 6 cut(s) | 54, 82, 248, 471, 582, 598 |
| CviKI_1 | RGCY | 6 cut(s) | 54, 82, 248, 471, 582, 598 |
| DdeI | CTNAG | 1 cut(s) | 10 |
| DpnI | GATC | 1 cut(s) | 556 |
| DpnII | GATC | 1 cut(s) | 554 |
| Eam1104I | CTCTTC | 1 cut(s) | 576 |
| EarI | CTCTTC | 1 cut(s) | 576 |
| Eco47I | GGWCC | 1 cut(s) | 178 |
| Eco57I | CTGAAG | 1 cut(s) | 347 |
| FaeI | CATG | 5 cut(s) | 19, 94, 215, 376, 638 |
| FaiI | YATR | 9 cut(s) | 17, 58, 92, 157, 213, 374, 505, 610, 636 |
| FaqI | GGGAC | 1 cut(s) | 266 |
| FatI | CATG | 5 cut(s) | 15, 90, 211, 372, 634 |
| Fnu4HI | GCNGC | 2 cut(s) | 271, 401 |
| Fsp4HI | GCNGC | 2 cut(s) | 271, 401 |
| FspBI | CTAG | 2 cut(s) | 79, 232 |
| GlaI | GCGC | 1 cut(s) | 139 |
| GluI | GCNGC | 2 cut(s) | 271, 401 |
| GsaI | CCCAGC | 1 cut(s) | 306 |
| HhaI | GCGC | 1 cut(s) | 140 |
| Hin1II | CATG | 5 cut(s) | 19, 94, 215, 376, 638 |
| Hin6I | GCGC | 1 cut(s) | 138 |
| HinP1I | GCGC | 1 cut(s) | 138 |
| HindIII | AAGCTT | 1 cut(s) | 596 |
| HphI | GGTGA | 3 cut(s) | 142, 343, 424 |
| Hpy188I | TCNGA | 2 cut(s) | 27, 327 |
| Hpy188III | TCNNGA | 2 cut(s) | 466, 535 |
| HpyAV | CCTTC | 6 cut(s) | 95, 235, 322, 362, 629, 635 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 51, 267, 499, 595 |
| HpyF3I | CTNAG | 1 cut(s) | 10 |
| Hsp92II | CATG | 5 cut(s) | 19, 94, 215, 376, 638 |
| HspAI | GCGC | 1 cut(s) | 138 |
| Kzo9I | GATC | 1 cut(s) | 554 |
| LmnI | GCTCC | 3 cut(s) | 87, 232, 579 |
| LpnPI | CCDG | 6 cut(s) | 16, 234, 288, 503, 543, 560 |
| Lsp1109I | GCAGC | 2 cut(s) | 257, 387 |
| MaeI | CTAG | 2 cut(s) | 79, 232 |
| MaeIII | GTNAC | 2 cut(s) | 33, 130 |
| MalI | GATC | 1 cut(s) | 556 |
| MboI | GATC | 1 cut(s) | 554 |
| MboII | GAAGA | 6 cut(s) | 53, 181, 308, 554, 556, 563 |
| MfeI | CAATTG | 1 cut(s) | 521 |
| MluCI | AATT | 7 cut(s) | 152, 308, 338, 357, 423, 478, 521 |
| MnlI | CCTC | 2 cut(s) | 44, 344 |
| MseI | TTAA | 2 cut(s) | 257, 292 |
| MspCI | CTTAAG | 1 cut(s) | 256 |
| MunI | CAATTG | 1 cut(s) | 521 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 51, 267, 499, 595 |
| NdeII | GATC | 1 cut(s) | 554 |
| NlaIII | CATG | 5 cut(s) | 19, 94, 215, 376, 638 |
| NmeAIII | GCCGAG | 1 cut(s) | 21 |
| NmuCI | GTSAC | 2 cut(s) | 33, 130 |
| NspI | RCATGY | 1 cut(s) | 376 |
| PkrI | GCNGC | 2 cut(s) | 272, 402 |
| PspFI | CCCAGC | 1 cut(s) | 302 |
| PspPI | GGNCC | 1 cut(s) | 178 |
| SaqAI | TTAA | 2 cut(s) | 257, 292 |
| SatI | GCNGC | 2 cut(s) | 271, 401 |
| Sau3AI | GATC | 1 cut(s) | 554 |
| Sau96I | GGNCC | 1 cut(s) | 178 |
| SetI | ASST | 7 cut(s) | 84, 246, 333, 473, 584, 600, 621 |
| SinI | GGWCC | 1 cut(s) | 178 |
| SmlI | CTYRAG | 3 cut(s) | 256, 466, 535 |
| SmoI | CTYRAG | 3 cut(s) | 256, 466, 535 |
| Sse9I | AATT | 7 cut(s) | 152, 308, 338, 357, 423, 478, 521 |
| SsiI | CCGC | 1 cut(s) | 45 |
| SspMI | CTAG | 2 cut(s) | 79, 232 |
| TasI | AATT | 7 cut(s) | 152, 308, 338, 357, 423, 478, 521 |
| Tru1I | TTAA | 2 cut(s) | 257, 292 |
| Tru9I | TTAA | 2 cut(s) | 257, 292 |
| TseFI | GTSAC | 2 cut(s) | 33, 130 |
| TseI | GCWGC | 2 cut(s) | 270, 400 |
| Tsp45I | GTSAC | 2 cut(s) | 33, 130 |
| TspDTI | ATGAA | 2 cut(s) | 172, 254 |
| TspGWI | ACGGA | 1 cut(s) | 191 |
| Vha464I | CTTAAG | 1 cut(s) | 256 |
| VpaK11BI | GGWCC | 1 cut(s) | 178 |
| XapI | RAATTY | 2 cut(s) | 308, 338 |
| XceI | RCATGY | 1 cut(s) | 376 |
| XspI | CTAG | 2 cut(s) | 79, 232 |