ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FA_hydroxylase | PF04116 | 136 - 272 | 3.2e-18 | Fatty acid hydroxylase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 345 |
| AccB1I | GGYRCC | 1 cut(s) | 812 |
| AccI | GTMKAC | 1 cut(s) | 827 |
| AciI | CCGC | 1 cut(s) | 853 |
| AclWI | GGATC | 1 cut(s) | 604 |
| AcoI | YGGCCR | 2 cut(s) | 32, 1033 |
| AcsI | RAATTY | 1 cut(s) | 254 |
| AcuI | CTGAAG | 1 cut(s) | 588 |
| AdeI | CACNNNGTG | 1 cut(s) | 1005 |
| AfaI | GTAC | 4 cut(s) | 150, 464, 977, 1039 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 343 |
| AflIII | ACRYGT | 1 cut(s) | 804 |
| AgsI | TTSAA | 1 cut(s) | 911 |
| AjnI | CCWGG | 3 cut(s) | 13, 77, 340 |
| AluBI | AGCT | 6 cut(s) | 54, 74, 333, 602, 676, 1056 |
| AluI | AGCT | 6 cut(s) | 54, 74, 333, 602, 676, 1056 |
| Alw21I | GWGCWC | 2 cut(s) | 543, 678 |
| Alw26I | GTCTC | 1 cut(s) | 267 |
| AlwI | GGATC | 1 cut(s) | 604 |
| AoxI | GGCC | 4 cut(s) | 32, 948, 992, 1033 |
| ApeKI | GCWGC | 1 cut(s) | 330 |
| ApoI | RAATTY | 1 cut(s) | 254 |
| AspS9I | GGNCC | 2 cut(s) | 192, 407 |
| AsuHPI | GGTGA | 4 cut(s) | 440, 473, 518, 743 |
| AsuII | TTCGAA | 1 cut(s) | 258 |
| AsuNHI | GCTAGC | 1 cut(s) | 70 |
| AvaII | GGWCC | 2 cut(s) | 192, 407 |
| BaeGI | GKGCMC | 1 cut(s) | 663 |
| BalI | TGGCCA | 1 cut(s) | 34 |
| BanI | GGYRCC | 1 cut(s) | 812 |
| BanII | GRGCYC | 2 cut(s) | 349, 678 |
| BbsI | GAAGAC | 1 cut(s) | 840 |
| Bbv12I | GWGCWC | 2 cut(s) | 543, 678 |
| BbvI | GCAGC | 1 cut(s) | 342 |
| BccI | CCATC | 4 cut(s) | 368, 459, 586, 903 |
| BceAI | ACGGC | 1 cut(s) | 1020 |
| BciT130I | CCWGG | 3 cut(s) | 15, 79, 342 |
| BcoDI | GTCTC | 1 cut(s) | 267 |
| BfaI | CTAG | 3 cut(s) | 71, 932, 1057 |
| BfuAI | ACCTGC | 1 cut(s) | 345 |
| BglII | AGATCT | 1 cut(s) | 130 |
| BisI | GCNGC | 1 cut(s) | 331 |
| BlsI | GCNGC | 1 cut(s) | 332 |
| Bme1390I | CCNGG | 3 cut(s) | 15, 79, 342 |
| Bme18I | GGWCC | 2 cut(s) | 192, 407 |
| BmgT120I | GGNCC | 2 cut(s) | 192, 407 |
| BmiI | GGNNCC | 1 cut(s) | 814 |
| BmrFI | CCNGG | 3 cut(s) | 15, 79, 342 |
| BmsI | GCATC | 2 cut(s) | 162, 895 |
| BmtI | GCTAGC | 1 cut(s) | 74 |
| BpiI | GAAGAC | 1 cut(s) | 840 |
| BpmI | CTGGAG | 1 cut(s) | 187 |
| Bpu14I | TTCGAA | 1 cut(s) | 258 |
| BpuEI | CTTGAG | 1 cut(s) | 698 |
| BsaJI | CCNNGG | 7 cut(s) | 13, 35, 77, 78, 341, 816, 945 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 369, 399, 476, 506 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 343 |
| Bse1I | ACTGG | 3 cut(s) | 35, 410, 434 |
| BseBI | CCWGG | 3 cut(s) | 15, 79, 342 |
| BseDI | CCNNGG | 7 cut(s) | 13, 35, 77, 78, 341, 816, 945 |
| BseGI | GGATG | 2 cut(s) | 177, 292 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BseMII | CTCAG | 1 cut(s) | 495 |
| BseNI | ACTGG | 3 cut(s) | 35, 410, 434 |
| BseRI | GAGGAG | 1 cut(s) | 878 |
| BseSI | GKGCMC | 1 cut(s) | 663 |
| BseXI | GCAGC | 1 cut(s) | 342 |
| BshFI | GGCC | 4 cut(s) | 34, 950, 994, 1035 |
| BshNI | GGYRCC | 1 cut(s) | 812 |
| BsiHKAI | GWGCWC | 2 cut(s) | 543, 678 |
| BslFI | GGGAC | 1 cut(s) | 261 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BsmAI | GTCTC | 1 cut(s) | 267 |
| BsmFI | GGGAC | 1 cut(s) | 261 |
| BsnI | GGCC | 4 cut(s) | 34, 950, 994, 1035 |
| Bsp119I | TTCGAA | 1 cut(s) | 258 |
| Bsp1286I | GDGCHC | 4 cut(s) | 349, 543, 663, 678 |
| Bsp143I | GATC | 3 cut(s) | 130, 596, 792 |
| Bsp19I | CCATGG | 1 cut(s) | 35 |
| BspACI | CCGC | 1 cut(s) | 853 |
| BspANI | GGCC | 4 cut(s) | 34, 950, 994, 1035 |
| BspCNI | CTCAG | 1 cut(s) | 496 |
| BspHI | TCATGA | 1 cut(s) | 645 |
| BspLI | GGNNCC | 1 cut(s) | 814 |
| BspMI | ACCTGC | 1 cut(s) | 345 |
| BspOI | GCTAGC | 1 cut(s) | 74 |
| BspPI | GGATC | 1 cut(s) | 604 |
| BspQI | GCTCTTC | 1 cut(s) | 566 |
| BspT104I | TTCGAA | 1 cut(s) | 258 |
| BspT107I | GGYRCC | 1 cut(s) | 812 |
| BsrI | ACTGG | 3 cut(s) | 35, 410, 434 |
| BssECI | CCNNGG | 7 cut(s) | 13, 35, 77, 78, 341, 816, 945 |
| BssMI | GATC | 3 cut(s) | 130, 596, 792 |
| BssT1I | CCWWGG | 2 cut(s) | 35, 945 |
| Bst2UI | CCWGG | 3 cut(s) | 15, 79, 342 |
| Bst4CI | ACNGT | 4 cut(s) | 361, 817, 907, 1005 |
| Bst6I | CTCTTC | 4 cut(s) | 167, 566, 753, 788 |
| BstBI | TTCGAA | 1 cut(s) | 258 |
| BstC8I | GCNNGC | 1 cut(s) | 72 |
| BstDEI | CTNAG | 2 cut(s) | 504, 890 |
| BstDSI | CCRYGG | 2 cut(s) | 35, 816 |
| BstF5I | GGATG | 2 cut(s) | 177, 292 |
| BstKTI | GATC | 3 cut(s) | 133, 599, 795 |
| BstMAI | GTCTC | 1 cut(s) | 267 |
| BstMBI | GATC | 3 cut(s) | 130, 596, 792 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 80, 947 |
| BstNI | CCWGG | 3 cut(s) | 15, 79, 342 |
| BstNSI | RCATGY | 1 cut(s) | 808 |
| BstSCI | CCNGG | 3 cut(s) | 13, 77, 340 |
| BstSLI | GKGCMC | 1 cut(s) | 663 |
| BstV1I | GCAGC | 1 cut(s) | 342 |
| BstV2I | GAAGAC | 1 cut(s) | 840 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 809 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| BsuRI | GGCC | 4 cut(s) | 34, 950, 994, 1035 |
| BtgI | CCRYGG | 2 cut(s) | 35, 816 |
| BtsCI | GGATG | 2 cut(s) | 177, 292 |
| BtsI | GCAGTG | 1 cut(s) | 661 |
| BtsIMutI | CAGTG | 3 cut(s) | 572, 661, 1001 |
| BveI | ACCTGC | 1 cut(s) | 345 |
| Cac8I | GCNNGC | 1 cut(s) | 72 |
| CciI | TCATGA | 1 cut(s) | 645 |
| Cfr13I | GGNCC | 2 cut(s) | 192, 407 |
| Csp6I | GTAC | 4 cut(s) | 149, 463, 976, 1038 |
| CviAII | CATG | 7 cut(s) | 36, 401, 646, 724, 787, 805, 972 |
| CviQI | GTAC | 4 cut(s) | 149, 463, 976, 1038 |
| DdeI | CTNAG | 2 cut(s) | 504, 890 |
| DpnI | GATC | 3 cut(s) | 132, 598, 794 |
| DpnII | GATC | 3 cut(s) | 130, 596, 792 |
| DraIII | CACNNNGTG | 1 cut(s) | 1005 |
| EaeI | YGGCCR | 2 cut(s) | 32, 1033 |
| Eam1104I | CTCTTC | 4 cut(s) | 167, 566, 753, 788 |
| EarI | CTCTTC | 4 cut(s) | 167, 566, 753, 788 |
| Ecl136II | GAGCTC | 1 cut(s) | 676 |
| Eco130I | CCWWGG | 2 cut(s) | 35, 945 |
| Eco24I | GRGCYC | 2 cut(s) | 349, 678 |
| Eco47I | GGWCC | 2 cut(s) | 192, 407 |
| Eco53kI | GAGCTC | 1 cut(s) | 676 |
| Eco57I | CTGAAG | 1 cut(s) | 588 |
| EcoICRI | GAGCTC | 1 cut(s) | 676 |
| EcoRI | GAATTC | 1 cut(s) | 254 |
| EcoRII | CCWGG | 3 cut(s) | 13, 77, 340 |
| EcoT14I | CCWWGG | 2 cut(s) | 35, 945 |
| EcoT38I | GRGCYC | 2 cut(s) | 349, 678 |
| ErhI | CCWWGG | 2 cut(s) | 35, 945 |
| FaeI | CATG | 7 cut(s) | 39, 404, 649, 727, 790, 808, 975 |
| FaqI | GGGAC | 1 cut(s) | 261 |
| FatI | CATG | 7 cut(s) | 35, 400, 645, 723, 786, 804, 971 |
| FauI | CCCGC | 1 cut(s) | 860 |
| FblI | GTMKAC | 1 cut(s) | 827 |
| Fnu4HI | GCNGC | 1 cut(s) | 331 |
| FokI | GGATG | 2 cut(s) | 184, 299 |
| FriOI | GRGCYC | 2 cut(s) | 349, 678 |
| Fsp4HI | GCNGC | 1 cut(s) | 331 |
| FspBI | CTAG | 3 cut(s) | 71, 932, 1057 |
| GluI | GCNGC | 1 cut(s) | 331 |
| GsuI | CTGGAG | 1 cut(s) | 187 |
| HaeIII | GGCC | 4 cut(s) | 34, 950, 994, 1035 |
| Hin1II | CATG | 7 cut(s) | 39, 404, 649, 727, 790, 808, 975 |
| HincII | GTYRAC | 2 cut(s) | 112, 268 |
| HindII | GTYRAC | 2 cut(s) | 112, 268 |
| HindIII | AAGCTT | 1 cut(s) | 52 |
| HinfI | GANTC | 9 cut(s) | 85, 234, 249, 378, 397, 523, 833, 869, 911 |
| HpaI | GTTAAC | 1 cut(s) | 112 |
| HphI | GGTGA | 4 cut(s) | 440, 473, 518, 743 |
| Hpy166II | GTNNAC | 4 cut(s) | 112, 268, 820, 828 |
| Hpy188I | TCNGA | 1 cut(s) | 735 |
| Hpy188III | TCNNGA | 3 cut(s) | 166, 646, 683 |
| Hpy8I | GTNNAC | 4 cut(s) | 112, 268, 820, 828 |
| Hpy99I | CGWCG | 1 cut(s) | 739 |
| HpyCH4III | ACNGT | 4 cut(s) | 361, 817, 907, 1005 |
| HpyCH4IV | ACGT | 1 cut(s) | 737 |
| HpyCH4V | TGCA | 2 cut(s) | 666, 886 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 80, 947 |
| HpyF3I | CTNAG | 2 cut(s) | 504, 890 |
| HpySE526I | ACGT | 1 cut(s) | 737 |
| Hsp92II | CATG | 7 cut(s) | 39, 404, 649, 727, 790, 808, 975 |
| KspAI | GTTAAC | 1 cut(s) | 112 |
| Kzo9I | GATC | 3 cut(s) | 130, 596, 792 |
| LguI | GCTCTTC | 1 cut(s) | 566 |
| LmnI | GCTCC | 2 cut(s) | 79, 180 |
| Lsp1109I | GCAGC | 1 cut(s) | 342 |
| LweI | GCATC | 2 cut(s) | 162, 895 |
| MaeI | CTAG | 3 cut(s) | 71, 932, 1057 |
| MaeII | ACGT | 1 cut(s) | 737 |
| MaeIII | GTNAC | 5 cut(s) | 385, 499, 520, 628, 997 |
| MalI | GATC | 3 cut(s) | 132, 598, 794 |
| MboI | GATC | 3 cut(s) | 130, 596, 792 |
| MboII | GAAGA | 5 cut(s) | 154, 553, 740, 775, 840 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MhlI | GDGCHC | 4 cut(s) | 349, 543, 663, 678 |
| MlsI | TGGCCA | 1 cut(s) | 34 |
| MluCI | AATT | 6 cut(s) | 254, 309, 510, 667, 761, 772 |
| MluNI | TGGCCA | 1 cut(s) | 34 |
| MlyI | GAGTC | 3 cut(s) | 243, 387, 517 |
| MmeI | TCCRAC | 2 cut(s) | 33, 758 |
| Mox20I | TGGCCA | 1 cut(s) | 34 |
| MscI | TGGCCA | 1 cut(s) | 34 |
| MseI | TTAA | 2 cut(s) | 57, 111 |
| MslI | CAYNNNNRTG | 2 cut(s) | 807, 970 |
| Msp20I | TGGCCA | 1 cut(s) | 34 |
| MspR9I | CCNGG | 3 cut(s) | 15, 79, 342 |
| MvaI | CCWGG | 3 cut(s) | 15, 79, 342 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 80, 947 |
| NcoI | CCATGG | 1 cut(s) | 35 |
| NdeII | GATC | 3 cut(s) | 130, 596, 792 |
| NheI | GCTAGC | 1 cut(s) | 70 |
| NlaIII | CATG | 7 cut(s) | 39, 404, 649, 727, 790, 808, 975 |
| NlaIV | GGNNCC | 1 cut(s) | 814 |
| NmeAIII | GCCGAG | 1 cut(s) | 562 |
| NmuCI | GTSAC | 5 cut(s) | 385, 499, 520, 628, 997 |
| NspI | RCATGY | 1 cut(s) | 808 |
| NspV | TTCGAA | 1 cut(s) | 258 |
| PagI | TCATGA | 1 cut(s) | 645 |
| PasI | CCCWGGG | 1 cut(s) | 78 |
| PciI | ACATGT | 1 cut(s) | 804 |
| PciSI | GCTCTTC | 1 cut(s) | 566 |
| PfeI | GAWTC | 6 cut(s) | 85, 234, 397, 833, 869, 911 |
| PkrI | GCNGC | 1 cut(s) | 332 |
| PleI | GAGTC | 3 cut(s) | 243, 386, 517 |
| PpsI | GAGTC | 3 cut(s) | 243, 386, 517 |
| PscI | ACATGT | 1 cut(s) | 804 |
| Psp124BI | GAGCTC | 1 cut(s) | 678 |
| Psp6I | CCWGG | 3 cut(s) | 13, 77, 340 |
| PspGI | CCWGG | 3 cut(s) | 13, 77, 340 |
| PspN4I | GGNNCC | 1 cut(s) | 814 |
| PspPI | GGNCC | 2 cut(s) | 192, 407 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| RsaI | GTAC | 4 cut(s) | 150, 464, 977, 1039 |
| RsaNI | GTAC | 4 cut(s) | 149, 463, 976, 1038 |
| RseI | CAYNNNNRTG | 2 cut(s) | 807, 970 |
| SacI | GAGCTC | 1 cut(s) | 678 |
| SapI | GCTCTTC | 1 cut(s) | 566 |
| SaqAI | TTAA | 2 cut(s) | 57, 111 |
| SatI | GCNGC | 1 cut(s) | 331 |
| Sau3AI | GATC | 3 cut(s) | 130, 596, 792 |
| Sau96I | GGNCC | 2 cut(s) | 192, 407 |
| SchI | GAGTC | 3 cut(s) | 243, 387, 517 |
| ScrFI | CCNGG | 3 cut(s) | 15, 79, 342 |
| SduI | GDGCHC | 4 cut(s) | 349, 543, 663, 678 |
| SfaNI | GCATC | 2 cut(s) | 162, 895 |
| SfuI | TTCGAA | 1 cut(s) | 258 |
| SinI | GGWCC | 2 cut(s) | 192, 407 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 807, 970 |
| SmlI | CTYRAG | 1 cut(s) | 713 |
| SmoI | CTYRAG | 1 cut(s) | 713 |
| Sse9I | AATT | 6 cut(s) | 254, 309, 510, 667, 761, 772 |
| SsiI | CCGC | 1 cut(s) | 853 |
| SspI | AATATT | 1 cut(s) | 300 |
| SspMI | CTAG | 3 cut(s) | 71, 932, 1057 |
| SstI | GAGCTC | 1 cut(s) | 678 |
| StyD4I | CCNGG | 3 cut(s) | 13, 77, 340 |
| StyI | CCWWGG | 2 cut(s) | 35, 945 |
| TaaI | ACNGT | 4 cut(s) | 361, 817, 907, 1005 |
| TaiI | ACGT | 1 cut(s) | 740 |
| TaqI | TCGA | 4 cut(s) | 232, 252, 258, 672 |
| TaqII | GACCGA | 1 cut(s) | 285 |
| TasI | AATT | 6 cut(s) | 254, 309, 510, 667, 761, 772 |
| TatI | WGTACW | 1 cut(s) | 462 |
| TfiI | GAWTC | 6 cut(s) | 85, 234, 397, 833, 869, 911 |
| Tru1I | TTAA | 2 cut(s) | 57, 111 |
| Tru9I | TTAA | 2 cut(s) | 57, 111 |
| TscAI | CASTG | 3 cut(s) | 579, 668, 1008 |
| TseFI | GTSAC | 5 cut(s) | 385, 499, 520, 628, 997 |
| TseI | GCWGC | 1 cut(s) | 330 |
| Tsp45I | GTSAC | 5 cut(s) | 385, 499, 520, 628, 997 |
| TspDTI | ATGAA | 5 cut(s) | 389, 409, 634, 662, 775 |
| TspRI | CASTG | 3 cut(s) | 579, 668, 1008 |
| VpaK11BI | GGWCC | 2 cut(s) | 192, 407 |
| XapI | RAATTY | 1 cut(s) | 254 |
| XceI | RCATGY | 1 cut(s) | 808 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 162 |
| XmiI | GTMKAC | 1 cut(s) | 827 |
| XspI | CTAG | 3 cut(s) | 71, 932, 1057 |