Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 25 - 167 | 1.7e-11 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 44, 187 |
| AciI | CCGC | 2 cut(s) | 290, 582 |
| AclWI | GGATC | 1 cut(s) | 149 |
| AfaI | GTAC | 2 cut(s) | 232, 351 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 137 |
| AgsI | TTSAA | 4 cut(s) | 69, 103, 343, 550 |
| AluBI | AGCT | 8 cut(s) | 87, 263, 300, 317, 371, 533, 570, 599 |
| AluI | AGCT | 8 cut(s) | 87, 263, 300, 317, 371, 533, 570, 599 |
| AlwI | GGATC | 1 cut(s) | 149 |
| AoxI | GGCC | 2 cut(s) | 16, 241 |
| AspLEI | GCGC | 2 cut(s) | 45, 188 |
| AspS9I | GGNCC | 1 cut(s) | 584 |
| AsuHPI | GGTGA | 2 cut(s) | 102, 266 |
| AvaII | GGWCC | 1 cut(s) | 584 |
| BauI | CACGAG | 1 cut(s) | 216 |
| BccI | CCATC | 1 cut(s) | 26 |
| BciVI | GTATCC | 1 cut(s) | 152 |
| BfaI | CTAG | 1 cut(s) | 402 |
| BfmI | CTRYAG | 2 cut(s) | 258, 392 |
| BfuI | GTATCC | 1 cut(s) | 152 |
| BlpI | GCTNAGC | 1 cut(s) | 595 |
| Bme18I | GGWCC | 1 cut(s) | 584 |
| BmgT120I | GGNCC | 1 cut(s) | 584 |
| Bpu10I | CCTNAGC | 1 cut(s) | 600 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 595 |
| BpuEI | CTTGAG | 1 cut(s) | 12 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 238, 268 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 137 |
| Bse118I | RCCGGY | 1 cut(s) | 116 |
| Bse3DI | GCAATG | 1 cut(s) | 476 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 137 |
| BseMI | GCAATG | 1 cut(s) | 476 |
| BseMII | CTCAG | 1 cut(s) | 614 |
| BsgI | GTGCAG | 1 cut(s) | 186 |
| BshFI | GGCC | 2 cut(s) | 18, 243 |
| BsiSI | CCGG | 1 cut(s) | 117 |
| BslFI | GGGAC | 1 cut(s) | 207 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 137 |
| BsmFI | GGGAC | 1 cut(s) | 207 |
| BsnI | GGCC | 2 cut(s) | 18, 243 |
| Bsp143I | GATC | 1 cut(s) | 154 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 595 |
| BspACI | CCGC | 2 cut(s) | 290, 582 |
| BspANI | GGCC | 2 cut(s) | 18, 243 |
| BspCNI | CTCAG | 1 cut(s) | 613 |
| BspPI | GGATC | 1 cut(s) | 149 |
| BsrDI | GCAATG | 1 cut(s) | 476 |
| BsrFI | RCCGGY | 1 cut(s) | 116 |
| BssAI | RCCGGY | 1 cut(s) | 116 |
| BssMI | GATC | 1 cut(s) | 154 |
| BssSI | CACGAG | 1 cut(s) | 216 |
| Bst2BI | CACGAG | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 1 cut(s) | 503 |
| BstDEI | CTNAG | 2 cut(s) | 595, 600 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstHHI | GCGC | 2 cut(s) | 45, 188 |
| BstKTI | GATC | 1 cut(s) | 157 |
| BstMBI | GATC | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 539 |
| BstSFI | CTRYAG | 2 cut(s) | 258, 392 |
| BsuI | GTATCC | 1 cut(s) | 152 |
| BsuRI | GGCC | 2 cut(s) | 18, 243 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 1 cut(s) | 503 |
| CfoI | GCGC | 2 cut(s) | 45, 188 |
| Cfr10I | RCCGGY | 1 cut(s) | 116 |
| Cfr13I | GGNCC | 1 cut(s) | 584 |
| Csp6I | GTAC | 2 cut(s) | 231, 350 |
| CviAII | CATG | 2 cut(s) | 485, 512 |
| CviQI | GTAC | 2 cut(s) | 231, 350 |
| DdeI | CTNAG | 2 cut(s) | 595, 600 |
| DpnI | GATC | 1 cut(s) | 156 |
| DpnII | GATC | 1 cut(s) | 154 |
| Eco147I | AGGCCT | 1 cut(s) | 243 |
| Eco47I | GGWCC | 1 cut(s) | 584 |
| FaeI | CATG | 2 cut(s) | 488, 515 |
| FaiI | YATR | 7 cut(s) | 184, 251, 363, 384, 458, 486, 513 |
| FaqI | GGGAC | 1 cut(s) | 207 |
| FatI | CATG | 2 cut(s) | 484, 511 |
| FokI | GGATG | 1 cut(s) | 68 |
| FspBI | CTAG | 1 cut(s) | 402 |
| FspI | TGCGCA | 2 cut(s) | 44, 187 |
| GlaI | GCGC | 2 cut(s) | 44, 187 |
| HaeIII | GGCC | 2 cut(s) | 18, 243 |
| HapII | CCGG | 1 cut(s) | 117 |
| HhaI | GCGC | 2 cut(s) | 45, 188 |
| Hin1II | CATG | 2 cut(s) | 488, 515 |
| Hin6I | GCGC | 2 cut(s) | 43, 186 |
| HinP1I | GCGC | 2 cut(s) | 43, 186 |
| HincII | GTYRAC | 1 cut(s) | 380 |
| HindII | GTYRAC | 1 cut(s) | 380 |
| HindIII | AAGCTT | 2 cut(s) | 315, 568 |
| HinfI | GANTC | 3 cut(s) | 253, 322, 435 |
| HpaII | CCGG | 1 cut(s) | 117 |
| HphI | GGTGA | 2 cut(s) | 102, 266 |
| Hpy166II | GTNNAC | 2 cut(s) | 110, 380 |
| Hpy188I | TCNGA | 3 cut(s) | 146, 225, 440 |
| Hpy188III | TCNNGA | 4 cut(s) | 29, 216, 326, 602 |
| Hpy8I | GTNNAC | 2 cut(s) | 110, 380 |
| HpyAV | CCTTC | 2 cut(s) | 141, 544 |
| HpyCH4III | ACNGT | 1 cut(s) | 73 |
| HpyCH4IV | ACGT | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 3 cut(s) | 203, 365, 469 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 539 |
| HpyF3I | CTNAG | 2 cut(s) | 595, 600 |
| HpySE526I | ACGT | 1 cut(s) | 6 |
| Hsp92II | CATG | 2 cut(s) | 488, 515 |
| HspAI | GCGC | 2 cut(s) | 43, 186 |
| Kzo9I | GATC | 1 cut(s) | 154 |
| LmnI | GCTCC | 1 cut(s) | 268 |
| LpnPI | CCDG | 4 cut(s) | 130, 332, 360, 587 |
| MaeI | CTAG | 1 cut(s) | 402 |
| MaeII | ACGT | 1 cut(s) | 6 |
| MalI | GATC | 1 cut(s) | 156 |
| MboI | GATC | 1 cut(s) | 154 |
| MluCI | AATT | 1 cut(s) | 234 |
| MlyI | GAGTC | 3 cut(s) | 247, 331, 444 |
| MmeI | TCCRAC | 1 cut(s) | 169 |
| MnlI | CCTC | 9 cut(s) | 8, 129, 184, 223, 254, 290, 463, 547, 598 |
| MseI | TTAA | 3 cut(s) | 75, 237, 387 |
| MspI | CCGG | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 539 |
| NdeII | GATC | 1 cut(s) | 154 |
| NlaIII | CATG | 2 cut(s) | 488, 515 |
| NsbI | TGCGCA | 2 cut(s) | 44, 187 |
| PceI | AGGCCT | 1 cut(s) | 243 |
| PleI | GAGTC | 3 cut(s) | 247, 330, 443 |
| PpsI | GAGTC | 3 cut(s) | 247, 330, 443 |
| PspPI | GGNCC | 1 cut(s) | 584 |
| RsaI | GTAC | 2 cut(s) | 232, 351 |
| RsaNI | GTAC | 2 cut(s) | 231, 350 |
| SaqAI | TTAA | 3 cut(s) | 75, 237, 387 |
| Sau3AI | GATC | 1 cut(s) | 154 |
| Sau96I | GGNCC | 1 cut(s) | 584 |
| SchI | GAGTC | 3 cut(s) | 247, 331, 444 |
| SfcI | CTRYAG | 2 cut(s) | 258, 392 |
| SinI | GGWCC | 1 cut(s) | 584 |
| SmlI | CTYRAG | 1 cut(s) | 27 |
| SmoI | CTYRAG | 1 cut(s) | 27 |
| Sse9I | AATT | 1 cut(s) | 234 |
| SseBI | AGGCCT | 1 cut(s) | 243 |
| SsiI | CCGC | 2 cut(s) | 290, 582 |
| SspMI | CTAG | 1 cut(s) | 402 |
| StuI | AGGCCT | 1 cut(s) | 243 |
| TaaI | ACNGT | 1 cut(s) | 73 |
| TaiI | ACGT | 1 cut(s) | 9 |
| TaqI | TCGA | 2 cut(s) | 134, 320 |
| TasI | AATT | 1 cut(s) | 234 |
| Tru1I | TTAA | 3 cut(s) | 75, 237, 387 |
| Tru9I | TTAA | 3 cut(s) | 75, 237, 387 |
| TspDTI | ATGAA | 1 cut(s) | 166 |
| VpaK11BI | GGWCC | 1 cut(s) | 584 |
| XspI | CTAG | 1 cut(s) | 402 |