Rw1G039380

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000031
Physical Location & Seq
Reverse (-)
66951122 .. 66955258
4137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G039380.1

Sequence Viewer

Length: 4137 bp
ATGAAGCTCCTTTATTGGAATATTCGTGGTATTGGCAACTCTGATACCCGTGCAGAATTATCAAATTTTTGTTCTAAATATCACCCAGATTTGGTTTGCATTTCAGAGCCAATGATTCCTTTTGACTCTGTTCCTGCTGCTTACTGGGCTTCCTTGAATCTACGACTAATTTCGGTAAATGATAGAGGTACTCTTCTTCCAAATATCTGGCTTCTTGGTTCTTTACATATCTCTTCTCCTACACTAGTGTTCTCTGCAGATCAACACATTACTATTCAGATTACTTTGGAAGGCACTCTTACTCAACTATCTTGTGTCTACGCGGCTACAACTGCACTCAAACGTCGCAAATTATGGTCGGATTTATTACTTCTTCGTCAACAGACCACCATTCCTTGGATGGCAATAGGAGACTTTAATGCAGTATTGGGGGCTCATGAGGCCATGAATGGTAGTCTCCCTGCGCGTTCATCTTGTGAGGATTTTCGCATTGCCACAGAACGATGTCATTTCACTCATCTTGATACTTCAGGGGCTTTCTTTACATGGTCTAAAGGACGAGGTCGAAAGCACTTGGAACGACGGCTTGATCGCTCCTTATGTGATGATGGCTGGTTTGCGGCTTGGCCATTTACCAACTGTATAGCTCTTCCCCGAGTGGTTTCTGATCATAATGGTTTACTTTTTTCAGCCGGTAAGTCTGTACCAGGGGGTCCTAAACCTTTTCGTTTCCAATCTATGTGGCTTCTCCACTCTTCTTTCAAAGAGTTGGTGGCGAATTGTTGGTCGACCACCAGGCCAGCTGGTTGCCCCATGTATGTGATGCTACAAAAATTAAAGGCCTTGAAGTCATGCCTTAAGCAATGGAACAACACTGTATTTGGGAATGTTCATAGAAACTTGGAGTTGGCCCGTGCTAAGTTGACTGCTATTCAACAAGATATTGCTTCTAATGGTTCTACTGATATTAACTTTGAGGCTGAAGTTCTTGCAAAGGCCGATGTTCTTAATGCGGTTAAGCATCAGGAGGCCTTTTGGAGGGACAAAGCTCGTGTAAAATGGTTTACTGAGGGGGATAAATGCTCAAATTTTTTCCATGCTTATGCCCGCAATAAGGCAAGGCGCTCTTCAATGCATTGCTTACAGGTTGGGGGAAATCTTCTTACTGATCCACAAGATATTGCTAATCATGTTGTTGAGTTTTATAAATCGTTATATGCTTCAGATGTTGCTCCAAGTGGTGTAGTTGATTTCTGCAAGGTCATTCCCTCCATGGTTTCTAAGGATGATAATTCAGTTTTAGTTGCTATTCCCACTGCAGAAGAGATTCGAAGTGTTGTTTTCTCTATGGACCCTTCTAGTTCTCCTGGTCCTGATGGTTTTCCCGGCTCCTTTTACCAAAATTGCTGGGATATTGTTGGTAATGATGTTATTGGCTTTGTGCAATTCTTTTTCCAACAAAATTGGTTATATCCAAATGCGAATTCTAACTTCATTGTGTTAATTCCAAAGACGGAAGGGGCGAATATGATCTCTCAGTTTAGGCCAATTGCTTTGGCCAATTTTTTATTTAAGATCATTCCAAAAATTATGGCAGATCGTTTGGGTCCTATAGCTTCACGTATTATTTCAGCTCATCAGACTGCCTTTCTTAAAGGCCGTCGTATTGCAGATTGCATTGGCCTTGTTTCTGAGGGCTTCAATCTATTGGATAGGAAAATCTACGGAGGTAATGTGGGCATTAAAGTTGATATTGCCAAAGCATTTGATACTCTTCACTGGCAGTTCCTTTTTCAGGTCTTAGAGAGGTTTGGGTTCTCCTCACGATTCAGAAATTTAATTCAGACTATTTTAAATTCTGCTAAGCTGTCAGTCTTGATTAATGGGACGCCACAAGGTTTTTTTTCTTGTGCTCGAGGGGTAAGACAAGGGGATCCTCTATCTCCTTTATTGTTCTGCATTGCGGAAGAAGCACTAAGTCGAGGACTGTCCTCTCTTTTTGATGCTCGAAAGATCAAATCTATTTCTATGCCGAGGAGTTGTCTAATTACTCATGTGCTCTATGCTGATGATCTTTTTATTTTCTGTCGAGGGGATATTTTTTCTCTTAACCGTTTGCAACTCTTTCTGGACGAGTATGGTGCTGCTTCAGGTCAGATAGTAAATAAAGAGAAGAGTACTTTTTATACTGGTGACAAATATTCTCATCGGCATAGGGTTATCAAACGTTTATTGGGCTTCAAGTTAGGTACTACTCCACTAACTTATCTGGGTGTTCCTATATTCAAGGGGAAGCCTCGACGTATACACCTTCAAGCAACTGCTGATAAGGCTAAATCTCGTCTTGTTGGCTGGCAAGGCAAGTTGTTGTCCATGGCGGGGCGTGTTCAGTTGGTTCATGATGTATTTCAGAGTTTGCTAATTCATAGTTTCTCTGTGTACTTGTGGCCTTCTTCACTATTGAAATACTTGTCTACATGTGCTCGAAACTTTATTTGGTCTGGAGATTTATCAAAAAGAAAACTTGTCATCGTTTCTTGGCGGCAAGTTTGTGTGCCAAAGAAGGAGGGGGGCCTTGGGCTACGTGATCTCAAGTCTCTTAACTTGGCTTCTCTGATATCTCTTAGTTGGTCTACTCTCACATCGGGTTCAATATGGAGCAGCTATGCATCTCAACGGTTTTCTATTTGCTGCAATATGAAATATCGATATTTTAGGTCCTCGGTTTGGCATGGTTTAAAGGCAGCTCTTCCTTTCATTTTCCATAACTCCAAGTGGCTTATTGGGGATGGAAAGTTGGTGAATTTATGGATGGACAAGTGGTTGAATGCCCCCTTAATTGTAAAATTACAGGCTCCGCATTTTCCCAAACGTTTGATGAGTACGGTGGAAAATTTTATTACTAATCAGCAATGGACCTTGCCCAATGAATTTTCAATTTCGTTTCCGGTTTTGGCTGCTGAAATTCTTCAAATCCCACTACCAATTGAACCAGAAAATGATGTATTAATTTGGGAGCCTTCAAGCTCAGGTTCTTTCTCTTTTTCTGATGGATACCATCTAGTTCGACAATCATTTTCCGAAGATGAGTGGGTTTCTAAGGTTTGGCATTCTTTCATTCCACCACGGTTATCTTTATTGGCATGGCGCCTTTCCTATGATAAACTACCTACTGATGTGCAGCTTCAAAAACGAGGTATCCCAACAGTGTCTGTTTGCCAGCTTTGTACTTTTGGCTATATTGAGGATTCTACTCACTTATTTGTCACTTGCTCGTTTGCGCAACATGTTTGGCAATGGCTAGCATGCTGTTTTGGGACTTTCTTACCGACTAGTGGCACTATTGGTGGGTTATTTACCTCCATTATTGGCAAGTCTTTCTCTCCCCAACTGAAAAATATTTGGCTTGCTAGTTGTCTCTATGCTCTTATGGCTATATGGAAAGCTCGCAATAAGCTTAGATTTGAGGACAAGCGCCCTTCCCTCATGAGAATTTTCAGCTCTCTCAAGGCTTGGCTTGGCTTTGCTGCTCCTTACATGCCAGGTTATTCGAATGGTTTGGTTGACACTCAGTTGTTGGTTGGGTTGGGTATTCAGCCTATTCCTAAAAAGCGAGTGGCGCCGCGGTTAGTTCTCTGGCACCCTCCAATTTTTCCTTGGATTAAGTTGAATACTGATGGTCTTGCAAAGGGTAATCCAGGACCTGCAACTTGTGGTGGTGTGTTTCGTGACACCCATGGTCATTACATTGGCGGTTACTGTCAAGGATTGGGACACAAATCTGCCTTCTACGCAGAGCTTATGGGTGTGATCATTGGGATTGAATATGCCTTCCAGTATGGTTGGCGATGCCTCTGGCTTGAATGTGATTCGACTAGTGTTATTGCATGCATCAAATCCTCATCTTTTGTTCCTCCTTGGCCGCTACGAATTGCATGGCTTACTTGCTTAGCACGTATTAGAGCAATGACCTTTCATTGTTCCCATATTCTTCGGGAAGGAAATACGGTGGCTGATAGAATGACAAACCTGGGCTTACTTTCTCCATCCTTGGTATGGCATGTTTCTCCCCCGCCTAATATATCTCCTTATCTTCTTATGGATGATTTGGGATTCCCTTACCTTCGCCATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

1378

Amino Acids

155.03

Weight (kDa)

9.4

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 4 - 224 1.4e-09 Endonuclease/Exonuclease/phosphatase family
RVT_1 PF00078 502 - 761 1.6e-31 Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT PF13966 1013 - 1098 3e-20 zinc-binding in reverse transcriptase
RVT_3 PF13456 1224 - 1343 6.3e-16 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000031)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05755
fragaria_vesca FvH4_1g13571 FvH4_2g06951 FvH4_2g09612 FvH4_3g24991 FvH4_3g39131 FvH4_4g01331 FvH4_5g11071 FvH4_5g22144 FvH4_5g22144 FvH4_5g27541 FvH4_5g38601 FvH4_6g09211 FvH4_6g17161 FvH4_6g30101 FvH4_6g30102 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g51131 FvH4_7g28851
malus_domestica MD02G1021900.v1.1 MD02G1050700.v1.1 MD02G1314000.v1.1 MD05G1244100.v1.1 MD07G1021300.v1.1 MD09G1113200.v1.1 MD09G1113300.v1.1 MD13G1019000.v1.1 MD17G1103400.v1.1
prunus_persica Prupe.1G484600_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.4G283800_v2.0.a1
pyrus_communis pycom01g13080 pycom03g05530 pycom05g09360 pycom05g20240 pycom06g06350 pycom06g14660 pycom09g03750 pycom13g22930 pycom14g00800 pycom15g35930 pycom17g09770 pycom17g25010
rosa_chinensis RchiOBHm_Chr1g0316991 RchiOBHm_Chr1g0321411 RchiOBHm_Chr1g0341061 RchiOBHm_Chr1g0352021 RchiOBHm_Chr1g0357231 RchiOBHm_Chr1g0361641 RchiOBHm_Chr1g0379151 RchiOBHm_Chr2g0084861 RchiOBHm_Chr2g0092021 RchiOBHm_Chr2g0102721 RchiOBHm_Chr2g0119161 RchiOBHm_Chr2g0120021 RchiOBHm_Chr2g0120031 RchiOBHm_Chr2g0120451 RchiOBHm_Chr2g0129631 RchiOBHm_Chr2g0133661 RchiOBHm_Chr2g0140031 RchiOBHm_Chr2g0154361 RchiOBHm_Chr2g0158311 RchiOBHm_Chr2g0160431 RchiOBHm_Chr2g0167951 RchiOBHm_Chr2g0168801 RchiOBHm_Chr3g0451531 RchiOBHm_Chr3g0453641 RchiOBHm_Chr3g0453831 RchiOBHm_Chr3g0455401 RchiOBHm_Chr3g0457461 RchiOBHm_Chr3g0459251 RchiOBHm_Chr3g0462451 RchiOBHm_Chr3g0465511 RchiOBHm_Chr3g0466111 RchiOBHm_Chr3g0469201 RchiOBHm_Chr3g0472791 RchiOBHm_Chr3g0472841 RchiOBHm_Chr4g0391691 RchiOBHm_Chr4g0393351 RchiOBHm_Chr4g0395061 RchiOBHm_Chr4g0395191 RchiOBHm_Chr4g0397541 RchiOBHm_Chr4g0402261 RchiOBHm_Chr4g0409421 RchiOBHm_Chr4g0417481 RchiOBHm_Chr4g0428291 RchiOBHm_Chr4g0434281 RchiOBHm_Chr4g0437231 RchiOBHm_Chr4g0439261 RchiOBHm_Chr5g0000531 RchiOBHm_Chr5g0016091 RchiOBHm_Chr5g0018801 RchiOBHm_Chr5g0026401 RchiOBHm_Chr5g0051821 RchiOBHm_Chr5g0062261 RchiOBHm_Chr5g0070711 RchiOBHm_Chr5g0074731 RchiOBHm_Chr5g0077831 RchiOBHm_Chr6g0251621 RchiOBHm_Chr6g0253181 RchiOBHm_Chr6g0258241 RchiOBHm_Chr6g0259301 RchiOBHm_Chr6g0263381 RchiOBHm_Chr6g0264461 RchiOBHm_Chr6g0278601 RchiOBHm_Chr6g0299951 RchiOBHm_Chr7g0184971 RchiOBHm_Chr7g0185631 RchiOBHm_Chr7g0200601 RchiOBHm_Chr7g0206171 RchiOBHm_Chr7g0222341 RchiOBHm_Chr7g0237631
rosa_laevigata RLG00000012173 RLG00000021075
rosa_multiflora Rmu_co8065174.1_g000001 Rmu_co8074360.1_g000001 Rmu_co8095164.1_g000001 Rmu_co8204978.1_g000001 Rmu_co8329721.1_g000001 Rmu_co8347171.1_g000001 Rmu_co8395661.1_g000001 Rmu_co8466967.1_g000001 Rmu_sc0000030.1_g000008 Rmu_sc0000290.1_g000015 Rmu_sc0000294.1_g000012 Rmu_sc0000319.1_g000020 Rmu_sc0000418.1_g000014 Rmu_sc0000423.1_g000010 Rmu_sc0000427.1_g000013 Rmu_sc0000430.1_g000011 Rmu_sc0000487.1_g000037 Rmu_sc0000765.1_g000028 Rmu_sc0000770.1_g000037 Rmu_sc0000785.1_g000011 Rmu_sc0000811.1_g000011 Rmu_sc0000848.1_g000004 Rmu_sc0000897.1_g000007 Rmu_sc0000955.1_g000014 Rmu_sc0001004.1_g000019 Rmu_sc0001010.1_g000068 Rmu_sc0001021.1_g000008 Rmu_sc0001084.1_g000013 Rmu_sc0001111.1_g000002 Rmu_sc0001190.1_g000015 Rmu_sc0001308.1_g000013 Rmu_sc0001398.1_g000010 Rmu_sc0001680.1_g000005 Rmu_sc0001926.1_g000017 Rmu_sc0001942.1_g000074 Rmu_sc0002068.1_g000010 Rmu_sc0002113.1_g000019 Rmu_sc0002299.1_g000032 Rmu_sc0002531.1_g000026 Rmu_sc0002549.1_g000005 Rmu_sc0002634.1_g000001 Rmu_sc0002640.1_g000014 Rmu_sc0002831.1_g000005 Rmu_sc0002848.1_g000018 Rmu_sc0003005.1_g000027 Rmu_sc0003076.1_g000012 Rmu_sc0003124.1_g000001 Rmu_sc0003143.1_g000004 Rmu_sc0003143.1_g000005 Rmu_sc0003143.1_g000006 Rmu_sc0003302.1_g000009 Rmu_sc0003368.1_g000035 Rmu_sc0003462.1_g000001 Rmu_sc0003692.1_g000016 Rmu_sc0003855.1_g000007 Rmu_sc0003858.1_g000008 Rmu_sc0004277.1_g000031 Rmu_sc0004732.1_g000013 Rmu_sc0004748.1_g000005 Rmu_sc0005091.1_g000024 Rmu_sc0005124.1_g000001 Rmu_sc0005167.1_g000001 Rmu_sc0005242.1_g000003 Rmu_sc0005486.1_g000005 Rmu_sc0005597.1_g000008 Rmu_sc0005653.1_g000004 Rmu_sc0006080.1_g000016 Rmu_sc0006371.1_g000003 Rmu_sc0006415.1_g000001 Rmu_sc0006522.1_g000003 Rmu_sc0006596.1_g000007 Rmu_sc0006991.1_g000005 Rmu_sc0007070.1_g000004 Rmu_sc0007737.1_g000005 Rmu_sc0007856.1_g000001 Rmu_sc0008241.1_g000001 Rmu_sc0008393.1_g000006 Rmu_sc0008563.1_g000008 Rmu_sc0008904.1_g000006 Rmu_sc0010313.1_g000014 Rmu_sc0010693.1_g000002 Rmu_sc0010917.1_g000011 Rmu_sc0011232.1_g000003 Rmu_sc0011978.1_g000005 Rmu_sc0012782.1_g000003 Rmu_sc0013716.1_g000002 Rmu_sc0015429.1_g000002 Rmu_sc0015649.1_g000014 Rmu_sc0021955.1_g000004 Rmu_sc0024117.1_g000001 Rmu_sc0024816.1_g000001 Rmu_sc0024816.1_g000006 Rmu_sc0026593.1_g000003 Rmu_sc0028245.1_g000001 Rmu_sc0029783.1_g000006 Rmu_sc0030817.1_g000001 Rmu_sc0031096.1_g000001 Rmu_sc0034014.1_g000001 Rmu_sc0036569.1_g000001 Rmu_sc0039034.1_g000001 Rmu_ssc0000004.1_g000015 Rmu_ssc0000053.1_g000002 Rmu_ssc0000126.1_g000069 Rmu_ssc0000211.1_g000020 Rmu_ssc0000295.1_g000005 Rmu_ssc0000359.1_g000057 Rmu_ssc0000385.1_g000011 Rmu_ssc0000416.1_g000004 Rmu_ssc0000434.1_g000018
rosa_roxburghii Rroxscaffold_159G00432920 Rroxscaffold_2G00091500 Rroxscaffold_2G00123510 Rroxscaffold_2G00124730 Rroxscaffold_2G00126030 Rroxscaffold_2G00138160 Rroxscaffold_2G00153260 Rroxscaffold_3G00224470 Rroxscaffold_3G00244670 Rroxscaffold_3G00261920 Rroxscaffold_3G00264150 Rroxscaffold_3G00270420 Rroxscaffold_4G00285150 Rroxscaffold_4G00299830 Rroxscaffold_4G00311290 Rroxscaffold_4G00323970 Rroxscaffold_5G00374550 Rroxscaffold_6G00427060 Rroxscaffold_7G00169160 Rroxscaffold_7G00174970
rosa_rugosa Rorug01G0012500 Rorug01G0046200 Rorug01G0118800 Rorug01G0120200 Rorug01G0135400.1 Rorug01G0174200 Rorug01G0204600 Rorug01G0253500 Rorug01G0290500 Rorug01G0290800 Rorug01G0312100 Rorug01G0333700 Rorug01G0339600 Rorug01G0377800 Rorug01G0400400 Rorug01G0402200 Rorug01G0410700 Rorug01G0431400 Rorug02G0011900 Rorug02G0012500 Rorug02G0022300 Rorug02G0062400 Rorug02G0085300 Rorug02G0091800 Rorug02G0104500 Rorug02G0125400 Rorug02G0131000 Rorug02G0147300 Rorug02G0171000 Rorug02G0181500 Rorug02G0196900 Rorug02G0207200 Rorug02G0226600 Rorug02G0241300 Rorug02G0274300 Rorug02G0280600 Rorug02G0280800 Rorug02G0304600 Rorug02G0304700 Rorug02G0338800 Rorug02G0375800 Rorug02G0379300 Rorug02G0379400 Rorug02G0447600 Rorug02G0459900 Rorug02G0467200 Rorug02G0535400 Rorug03G0072300 Rorug03G0218900 Rorug03G0223700 Rorug03G0231500 Rorug03G0257200 Rorug03G0257300 Rorug03G0257400 Rorug03G0265700 Rorug03G0290200 Rorug03G0291300 Rorug03G0311000 Rorug03G0326900 Rorug03G0332700 Rorug03G0352000 Rorug03G0369700.1 Rorug04G0014000 Rorug04G0014500 Rorug04G0124100 Rorug04G0142100 Rorug04G0151400 Rorug04G0160700 Rorug04G0186400 Rorug04G0227600 Rorug04G0253800 Rorug04G0274400 Rorug04G0274600 Rorug04G0295600 Rorug04G0302000 Rorug04G0320600 Rorug04G0331300 Rorug04G0352200 Rorug04G0407000 Rorug04G0430300 Rorug04G0443000 Rorug04G0446400 Rorug04G0459000 Rorug05G0042400 Rorug05G0042500 Rorug05G0064900 Rorug05G0074300 Rorug05G0097700 Rorug05G0102300 Rorug05G0102300 Rorug05G0123700 Rorug05G0145800 Rorug05G0152900 Rorug05G0175900 Rorug05G0182100 Rorug05G0196000 Rorug05G0207000 Rorug05G0212800 Rorug05G0226400 Rorug05G0241500 Rorug05G0264800.1 Rorug05G0269600 Rorug05G0298200 Rorug05G0304300 Rorug05G0344300 Rorug05G0382300 Rorug05G0392300.1 Rorug05G0427900 Rorug05G0433500 Rorug05G0452700 Rorug05G0464600 Rorug05G0475800 Rorug05G0488600 Rorug05G0493000 Rorug05G0504800 Rorug05G0505500.1 Rorug05G0508400 Rorug05G0545800 Rorug05G0587000 Rorug05G0591100.1 Rorug06G0013200 Rorug06G0037700 Rorug06G0098200 Rorug06G0184500 Rorug06G0185300 Rorug06G0188200 Rorug06G0208300 Rorug06G0212900 Rorug06G0251500 Rorug06G0328000 Rorug06G0366100 Rorug06G0367400 Rorug06G0371200 Rorug06G0393500 Rorug06G0423000 Rorug06G0440500 Rorug06G0445400 Rorug06G0451700 Rorug06G0479400 Rorug06G0479500 Rorug06G0479600 Rorug06G0479700 Rorug06G0479800 Rorug06G0483100 Rorug07G0001200 Rorug07G0005200 Rorug07G0068600 Rorug07G0109300 Rorug07G0115500 Rorug07G0117000 Rorug07G0123500 Rorug07G0128000 Rorug07G0128100 Rorug07G0225500 Rorug07G0280200 Rorug07G0317300
rosa_samantha Rh1AG251400 Rh1BG133300 Rh1CG079900 Rh1CG235600 Rh1DG168000 Rh2AG533100 Rh2BG546900 Rh2CG517000 Rh2DG237900 Rh2DG555900 Rh3CG293400 Rh4AG419800 Rh4BG306300 Rh4CG446100 Rh5AG268900 Rh5AG282600 Rh5BG006600 Rh5BG345700 Rh5CG468100 Rh6CG190700 Rh6DG111900 Rh7BG172200 Rh7BG412200
rosa_wichuraiana Rw0G003620 Rw0G004000 Rw0G011770 Rw0G019070 Rw0G020070 Rw1G002990 Rw1G003550 Rw1G003860 Rw1G005930 Rw1G018430 Rw1G021160 Rw1G023820 Rw1G032700 Rw1G035790 Rw1G036160 Rw1G038660 Rw1G039380 Rw2G016120 Rw2G018680 Rw2G026860 Rw2G028670 Rw2G040870 Rw2G041040 Rw2G041410 Rw2G044140 Rw2G047570 Rw3G019760 Rw4G031020 Rw5G003700 Rw5G004830 Rw5G037470 Rw5G047400 Rw6G020150 Rw6G024010 Rw6G026600 Rw7G002480 Rw7G004430 Rw7G011870 Rw7G035520 Rw7G041260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1206
Acc16I TGCGCA 1 cut(s) 3282
Acc36I ACCTGC 1 cut(s) 3712
AccB1I GGYRCC 3 cut(s) 3147, 3619, 3639
AccB7I CCANNNNNTGG 1 cut(s) 396
AccI GTMKAC 5 cut(s) 318, 788, 2305, 2474, 2633
AccII CGCG 3 cut(s) 323, 466, 3625
AclI AACGTT 2 cut(s) 2227, 2872
AclWI GGATC 3 cut(s) 1163, 1928, 1941
AcoI YGGCCR 3 cut(s) 626, 1557, 3920
AcuI CTGAAG 4 cut(s) 513, 1002, 1206, 2133
AcyI GRCGYC 3 cut(s) 1889, 3148, 3620
AfaI GTAC 7 cut(s) 190, 705, 2179, 2251, 2441, 2884, 3229
AfiI CCNNNNNNNGG 9 cut(s) 91, 396, 1038, 1114, 1795, 2379, 2727, 3335, 4056
AflII CTTAAG 1 cut(s) 857
AflIII ACRYGT 2 cut(s) 2477, 3286
AhlI ACTAGT 3 cut(s) 244, 3332, 3875
AjnI CCWGG 6 cut(s) 706, 794, 1366, 3541, 3697, 4029
AjuI GAANNNNNNNTTGG 4 cut(s) 1468, 1500, 2479, 2511
Alw21I GWGCWC 3 cut(s) 1915, 2061, 2485
Alw26I GTCTC 4 cut(s) 405, 461, 2601, 3422
AlwI GGATC 3 cut(s) 1163, 1928, 1941
AlwNI CAGNNNCTG 2 cut(s) 3212, 3704
Ama87I CYCGRG 2 cut(s) 654, 1914
ApeKI GCWGC 8 cut(s) 137, 2144, 2661, 2691, 2744, 2957, 3181, 3527
ArsI GACNNNNNNTTYG 2 cut(s) 770, 802
AseI ATTAAT 2 cut(s) 1881, 3008
Asp700I GAANNNNTTC 2 cut(s) 1326, 2967
AspLEI GCGC 6 cut(s) 466, 1125, 3150, 3283, 3477, 3622
AspS9I GGNCC 9 cut(s) 713, 910, 1351, 1370, 1607, 2572, 2718, 2916, 3701
AsuC2I CCSGG 1 cut(s) 1386
AsuHPI GGTGA 3 cut(s) 74, 2204, 2812
AsuII TTCGAA 2 cut(s) 1330, 3551
AsuNHI GCTAGC 1 cut(s) 3301
AvaI CYCGRG 2 cut(s) 654, 1914
AvaII GGWCC 7 cut(s) 713, 1351, 1370, 1607, 2718, 2916, 3701
BalI TGGCCA 2 cut(s) 628, 1559
BamHI GGATCC 1 cut(s) 1933
BanI GGYRCC 3 cut(s) 3147, 3619, 3639
BanII GRGCYC 1 cut(s) 436
BauI CACGAG 1 cut(s) 1050
Bbv12I GWGCWC 3 cut(s) 1915, 2061, 2485
BbvI GCAGC 8 cut(s) 124, 2131, 2673, 2678, 2756, 2944, 3193, 3514
BccI CCATC 9 cut(s) 394, 602, 1370, 2783, 2806, 3044, 3066, 3671, 4054
BceAI ACGGC 2 cut(s) 599, 1644
BcgI CGANNNNNNTGC 2 cut(s) 2123, 2157
BciT130I CCWGG 6 cut(s) 708, 796, 1368, 3543, 3699, 4031
BciVI GTATCC 2 cut(s) 3047, 3209
BclI TGATCA 2 cut(s) 667, 3810
BcnI CCSGG 1 cut(s) 1386
BcoDI GTCTC 4 cut(s) 405, 461, 2601, 3422
BcuI ACTAGT 3 cut(s) 244, 3332, 3875
BfaI CTAG 7 cut(s) 245, 1359, 3062, 3302, 3333, 3411, 3876
BfmI CTRYAG 3 cut(s) 255, 1317, 1611
BfoI RGCGCY 4 cut(s) 1126, 3151, 3478, 3623
BfrI CTTAAG 1 cut(s) 857
BfuAI ACCTGC 1 cut(s) 3712
BfuI GTATCC 2 cut(s) 3047, 3209
BlpI GCTNAGC 2 cut(s) 1863, 3949
BmcAI AGTACT 1 cut(s) 2179
Bme1390I CCNGG 7 cut(s) 708, 796, 1368, 1386, 3543, 3699, 4031
Bme18I GGWCC 7 cut(s) 713, 1351, 1370, 1607, 2718, 2916, 3701
BmeT110I CYCGRG 2 cut(s) 654, 1914
BmgT120I GGNCC 9 cut(s) 713, 910, 1351, 1370, 1607, 2572, 2718, 2916, 3701
BmrFI CCNGG 7 cut(s) 708, 796, 1368, 1386, 3543, 3699, 4031
BmrI ACTGGG 1 cut(s) 154
BmsI GCATC 6 cut(s) 813, 1030, 1993, 2678, 3839, 3900
BmtI GCTAGC 1 cut(s) 3305
BmuI ACTGGG 1 cut(s) 154
BpmI CTGGAG 1 cut(s) 2523
Bpu10I CCTNAGC 1 cut(s) 3028
Bpu1102I GCTNAGC 2 cut(s) 1863, 3949
Bpu14I TTCGAA 2 cut(s) 1330, 3551
BpuEI CTTGAG 2 cut(s) 2576, 3491
BpuMI CCSGG 1 cut(s) 1386
Bsa29I ATCGAT 1 cut(s) 2707
BsaAI YACGTR 3 cut(s) 1622, 2585, 3956
BsaHI GRCGYC 3 cut(s) 1889, 3148, 3620
BsaWI WCCGGW 1 cut(s) 2947
BsaXI ACNNNNNCTCC 2 cut(s) 1719, 1749
Bsc4I CCNNNNNNNGG 9 cut(s) 91, 396, 1038, 1114, 1795, 2379, 2727, 3335, 4056
Bse118I RCCGGY 1 cut(s) 692
Bse1I ACTGG 4 cut(s) 149, 1784, 2194, 3835
Bse3DI GCAATG 7 cut(s) 489, 869, 1135, 1959, 2918, 3302, 3972
BseBI CCWGG 6 cut(s) 708, 796, 1368, 3543, 3699, 4031
BseCI ATCGAT 1 cut(s) 2707
BseGI GGATG 6 cut(s) 405, 1291, 2794, 2817, 4046, 4108
BseLI CCNNNNNNNGG 9 cut(s) 91, 396, 1038, 1114, 1795, 2379, 2727, 3335, 4056
BseMI GCAATG 7 cut(s) 489, 869, 1135, 1959, 2918, 3302, 3972
BseMII CTCAG 5 cut(s) 1059, 1550, 1683, 3042, 3584
BseNI ACTGG 4 cut(s) 149, 1784, 2194, 3835
BseRI GAGGAG 2 cut(s) 1810, 2050
BseXI GCAGC 8 cut(s) 124, 2131, 2673, 2678, 2756, 2944, 3193, 3514
BseYI CCCAGC 1 cut(s) 1407
BsgI GTGCAG 3 cut(s) 72, 318, 3200
Bsh1236I CGCG 3 cut(s) 323, 466, 3625
BshNI GGYRCC 3 cut(s) 3147, 3619, 3639
BshVI ATCGAT 1 cut(s) 2707
BsiHKAI GWGCWC 3 cut(s) 1915, 2061, 2485
BsiHKCI CYCGRG 2 cut(s) 654, 1914
BsiSI CCGG 3 cut(s) 693, 1386, 2948
BslFI GGGAC 4 cut(s) 1055, 1900, 3331, 3786
BslI CCNNNNNNNGG 9 cut(s) 91, 396, 1038, 1114, 1795, 2379, 2727, 3335, 4056
BsmAI GTCTC 4 cut(s) 405, 461, 2601, 3422
BsmFI GGGAC 4 cut(s) 1055, 1900, 3331, 3786
BsmI GAATGC 2 cut(s) 2833, 3109
BsoBI CYCGRG 2 cut(s) 654, 1914
Bsp119I TTCGAA 2 cut(s) 1330, 3551
Bsp1286I GDGCHC 4 cut(s) 436, 1915, 2061, 2485
Bsp1720I GCTNAGC 2 cut(s) 1863, 3949
Bsp19I CCATGG 3 cut(s) 1272, 2373, 3736
BspCNI CTCAG 5 cut(s) 1060, 1549, 1684, 3041, 3583
BspDI ATCGAT 1 cut(s) 2707
BspFNI CGCG 3 cut(s) 323, 466, 3625
BspHI TCATGA 3 cut(s) 436, 2398, 3486
BspMAI CTGCAG 2 cut(s) 259, 1321
BspMI ACCTGC 1 cut(s) 3712
BspOI GCTAGC 1 cut(s) 3305
BspPI GGATC 3 cut(s) 1163, 1928, 1941
BspQI GCTCTTC 3 cut(s) 654, 1132, 2754
BspT104I TTCGAA 2 cut(s) 1330, 3551
BspT107I GGYRCC 3 cut(s) 3147, 3619, 3639
BspTI CTTAAG 1 cut(s) 857
BsrDI GCAATG 7 cut(s) 489, 869, 1135, 1959, 2918, 3302, 3972
BsrFI RCCGGY 1 cut(s) 692
BsrI ACTGG 4 cut(s) 149, 1784, 2194, 3835
BssAI RCCGGY 1 cut(s) 692
BssNAI GTATAC 1 cut(s) 2306
BssNI GRCGYC 3 cut(s) 1889, 3148, 3620
BssSI CACGAG 1 cut(s) 1050
BssT1I CCWWGG 8 cut(s) 395, 1272, 2373, 2575, 3656, 3736, 3917, 4050
Bst1107I GTATAC 1 cut(s) 2306
Bst2BI CACGAG 1 cut(s) 1050
Bst2UI CCWGG 6 cut(s) 708, 796, 1368, 3543, 3699, 4031
Bst6I CTCTTC 9 cut(s) 198, 238, 654, 760, 1132, 1317, 1779, 2168, 2754
BstACI GRCGYC 3 cut(s) 1889, 3148, 3620
BstAFI CTTAAG 1 cut(s) 857
BstBAI YACGTR 3 cut(s) 1622, 2585, 3956
BstBI TTCGAA 2 cut(s) 1330, 3551
BstC8I GCNNGC 9 cut(s) 801, 1108, 2354, 3221, 3303, 3307, 3408, 3448, 3889
BstDSI CCRYGG 5 cut(s) 1272, 2373, 3125, 3623, 3736
BstENI CCTNNNNNAGG 2 cut(s) 1036, 1793
BstF5I GGATG 6 cut(s) 405, 1291, 2794, 2817, 4046, 4108
BstFNI CGCG 3 cut(s) 323, 466, 3625
BstH2I RGCGCY 4 cut(s) 1126, 3151, 3478, 3623
BstHHI GCGC 6 cut(s) 466, 1125, 3150, 3283, 3477, 3622
BstMAI GTCTC 4 cut(s) 405, 461, 2601, 3422
BstMWI GCNNNNNNNGC 9 cut(s) 146, 332, 440, 1970, 2330, 2358, 3431, 3619, 3791
BstNI CCWGG 6 cut(s) 708, 796, 1368, 3543, 3699, 4031
BstNSI RCATGY 6 cut(s) 2481, 3290, 3309, 3541, 3891, 4064
BstSCI CCNGG 7 cut(s) 706, 794, 1366, 1384, 3541, 3697, 4029
BstSFI CTRYAG 3 cut(s) 255, 1317, 1611
BstUI CGCG 3 cut(s) 323, 466, 3625
BstV1I GCAGC 8 cut(s) 124, 2131, 2673, 2678, 2756, 2944, 3193, 3514
BstX2I RGATCY 1 cut(s) 1933
BstXI CCANNNNNNTGG 1 cut(s) 207
BstYI RGATCY 1 cut(s) 1933
BstZ17I GTATAC 1 cut(s) 2306
Bsu15I ATCGAT 1 cut(s) 2707
BsuI GTATCC 2 cut(s) 3047, 3209
BsuTUI ATCGAT 1 cut(s) 2707
BtgI CCRYGG 5 cut(s) 1272, 2373, 3125, 3623, 3736
BtgZI GCGATG 1 cut(s) 3862
BtsCI GGATG 6 cut(s) 405, 1291, 2794, 2817, 4046, 4108
BtsI GCAGTG 1 cut(s) 1314
BtsIMutI CAGTG 4 cut(s) 873, 1314, 1777, 3213
BveI ACCTGC 1 cut(s) 3712
Cac8I GCNNGC 9 cut(s) 801, 1108, 2354, 3221, 3303, 3307, 3408, 3448, 3889
CaiI CAGNNNCTG 2 cut(s) 3212, 3704
CciI TCATGA 3 cut(s) 436, 2398, 3486
CfoI GCGC 6 cut(s) 466, 1125, 3150, 3283, 3477, 3622
Cfr10I RCCGGY 1 cut(s) 692
Cfr13I GGNCC 9 cut(s) 713, 910, 1351, 1370, 1607, 2572, 2718, 2916, 3701
Cfr42I CCGCGG 1 cut(s) 3626
ClaI ATCGAT 1 cut(s) 2707
CseI GACGC 1 cut(s) 1897
Csp6I GTAC 7 cut(s) 189, 704, 2178, 2250, 2440, 2883, 3228
CspCI CAANNNNNGTGG 2 cut(s) 722, 757
CviQI GTAC 7 cut(s) 189, 704, 2178, 2250, 2440, 2883, 3228
DinI GGCGCC 2 cut(s) 3149, 3621
DraI TTTAAA 2 cut(s) 1854, 2739
EaeI YGGCCR 3 cut(s) 626, 1557, 3920
Eam1104I CTCTTC 9 cut(s) 198, 238, 654, 760, 1132, 1317, 1779, 2168, 2754
EarI CTCTTC 9 cut(s) 198, 238, 654, 760, 1132, 1317, 1779, 2168, 2754
Eco130I CCWWGG 8 cut(s) 395, 1272, 2373, 2575, 3656, 3736, 3917, 4050
Eco147I AGGCCT 2 cut(s) 842, 1031
Eco24I GRGCYC 1 cut(s) 436
Eco32I GATATC 1 cut(s) 2619
Eco47I GGWCC 7 cut(s) 713, 1351, 1370, 1607, 2718, 2916, 3701
Eco57I CTGAAG 4 cut(s) 513, 1002, 1206, 2133
Eco88I CYCGRG 2 cut(s) 654, 1914
EcoNI CCTNNNNNAGG 2 cut(s) 1036, 1793
EcoO109I RGGNCCY 5 cut(s) 713, 1607, 2572, 2718, 3701
EcoRI GAATTC 1 cut(s) 1483
EcoRII CCWGG 6 cut(s) 706, 794, 1366, 3541, 3697, 4029
EcoRV GATATC 1 cut(s) 2619
EcoT14I CCWWGG 8 cut(s) 395, 1272, 2373, 2575, 3656, 3736, 3917, 4050
EcoT22I ATGCAT 3 cut(s) 1137, 2671, 3893
EcoT38I GRGCYC 1 cut(s) 436
EgeI GGCGCC 2 cut(s) 3149, 3621
EheI GGCGCC 2 cut(s) 3149, 3621
ErhI CCWWGG 8 cut(s) 395, 1272, 2373, 2575, 3656, 3736, 3917, 4050
FalI AAGNNNNNCTT 4 cut(s) 282, 314, 1111, 1143
FaqI GGGAC 4 cut(s) 1055, 1900, 3331, 3786
FauI CCCGC 3 cut(s) 1115, 2371, 4080
FbaI TGATCA 2 cut(s) 667, 3810
FblI GTMKAC 5 cut(s) 318, 788, 2305, 2474, 2633
FokI GGATG 6 cut(s) 412, 1298, 2801, 2824, 4033, 4115
FriOI GRGCYC 1 cut(s) 436
FspBI CTAG 7 cut(s) 245, 1359, 3062, 3302, 3333, 3411, 3876
FspI TGCGCA 1 cut(s) 3282
GlaI GCGC 6 cut(s) 465, 1124, 3149, 3282, 3476, 3621
GsaI CCCAGC 1 cut(s) 1411
GsuI CTGGAG 1 cut(s) 2523
HaeII RGCGCY 4 cut(s) 1126, 3151, 3478, 3623
HapII CCGG 3 cut(s) 693, 1386, 2948
HgaI GACGC 1 cut(s) 1897
HhaI GCGC 6 cut(s) 466, 1125, 3150, 3283, 3477, 3622
Hin1I GRCGYC 3 cut(s) 1889, 3148, 3620
Hin6I GCGC 6 cut(s) 464, 1123, 3148, 3281, 3475, 3620
HinP1I GCGC 6 cut(s) 464, 1123, 3148, 3281, 3475, 3620
HincII GTYRAC 4 cut(s) 380, 789, 924, 3565
HindII GTYRAC 4 cut(s) 380, 789, 924, 3565
HindIII AAGCTT 1 cut(s) 3455
HinfI GANTC 8 cut(s) 115, 125, 157, 1327, 1827, 3248, 3869, 4113
HpaII CCGG 3 cut(s) 693, 1386, 2948
HphI GGTGA 3 cut(s) 74, 2204, 2812
Hpy99I CGWCG 4 cut(s) 348, 585, 1665, 2304
HpyCH4IV ACGT 7 cut(s) 343, 1621, 2227, 2302, 2584, 2872, 3955
HpyF10VI GCNNNNNNNGC 9 cut(s) 146, 332, 440, 1970, 2330, 2358, 3431, 3619, 3791
HpySE526I ACGT 7 cut(s) 343, 1621, 2227, 2302, 2584, 2872, 3955
Hsp92I GRCGYC 3 cut(s) 1889, 3148, 3620
HspAI GCGC 6 cut(s) 464, 1123, 3148, 3281, 3475, 3620
KasI GGCGCC 2 cut(s) 3147, 3619
Ksp22I TGATCA 2 cut(s) 667, 3810
KspI CCGCGG 1 cut(s) 3626
LguI GCTCTTC 3 cut(s) 654, 1132, 2754
LmnI GCTCC 8 cut(s) 12, 599, 1237, 1394, 2658, 2860, 3016, 3535
Lsp1109I GCAGC 8 cut(s) 124, 2131, 2673, 2678, 2756, 2944, 3193, 3514
LweI GCATC 6 cut(s) 813, 1030, 1993, 2678, 3839, 3900
MaeI CTAG 7 cut(s) 245, 1359, 3062, 3302, 3333, 3411, 3876
MaeII ACGT 7 cut(s) 343, 1621, 2227, 2302, 2584, 2872, 3955
MaeIII GTNAC 4 cut(s) 2192, 3265, 3728, 3755
MfeI CAATTG 2 cut(s) 1548, 2985
MflI RGATCY 1 cut(s) 1933
MhlI GDGCHC 4 cut(s) 436, 1915, 2061, 2485
MlsI TGGCCA 2 cut(s) 628, 1559
MluNI TGGCCA 2 cut(s) 628, 1559
Mly113I GGCGCC 2 cut(s) 3148, 3620
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 2 cut(s) 339, 1480
Mox20I TGGCCA 2 cut(s) 628, 1559
Mph1103I ATGCAT 3 cut(s) 1137, 2671, 3893
MroXI GAANNNNTTC 2 cut(s) 1326, 2967
MscI TGGCCA 2 cut(s) 628, 1559
MslI CAYNNNNRTG 2 cut(s) 818, 1101
Msp20I TGGCCA 2 cut(s) 628, 1559
MspA1I CMGCKG 2 cut(s) 803, 3625
MspCI CTTAAG 1 cut(s) 857
MspI CCGG 3 cut(s) 693, 1386, 2948
MspR9I CCNGG 7 cut(s) 708, 796, 1368, 1386, 3543, 3699, 4031
MunI CAATTG 2 cut(s) 1548, 2985
Mva1269I GAATGC 2 cut(s) 2833, 3109
MvaI CCWGG 6 cut(s) 708, 796, 1368, 3543, 3699, 4031
MvnI CGCG 3 cut(s) 323, 466, 3625
MwoI GCNNNNNNNGC 9 cut(s) 146, 332, 440, 1970, 2330, 2358, 3431, 3619, 3791
NarI GGCGCC 2 cut(s) 3148, 3620
NciI CCSGG 1 cut(s) 1386
NcoI CCATGG 3 cut(s) 1272, 2373, 3736
NheI GCTAGC 1 cut(s) 3301
NmeAIII GCCGAG 1 cut(s) 2058
NmuCI GTSAC 3 cut(s) 2192, 3265, 3728
NsbI TGCGCA 1 cut(s) 3282
NsiI ATGCAT 3 cut(s) 1137, 2671, 3893
NspI RCATGY 6 cut(s) 2481, 3290, 3309, 3541, 3891, 4064
NspV TTCGAA 2 cut(s) 1330, 3551
PaeI GCATGC 2 cut(s) 3309, 3891
PaeR7I CTCGAG 1 cut(s) 1914
PagI TCATGA 3 cut(s) 436, 2398, 3486
PceI AGGCCT 2 cut(s) 842, 1031
PciI ACATGT 2 cut(s) 2477, 3286
PciSI GCTCTTC 3 cut(s) 654, 1132, 2754
PcsI WCGNNNNNNNCGW 1 cut(s) 1520
PctI GAATGC 2 cut(s) 2833, 3109
PdmI GAANNNNTTC 2 cut(s) 1326, 2967
PfeI GAWTC 7 cut(s) 115, 157, 1327, 1827, 3248, 3869, 4113
PflFI GACNNNGTC 1 cut(s) 561
PflMI CCANNNNNTGG 1 cut(s) 396
PfoI TCCNGGA 1 cut(s) 3697
PleI GAGTC 1 cut(s) 119
PluTI GGCGCC 2 cut(s) 3151, 3623
PpsI GAGTC 1 cut(s) 119
Ppu21I YACGTR 3 cut(s) 1622, 2585, 3956
PpuMI RGGWCCY 4 cut(s) 713, 1607, 2718, 3701
PscI ACATGT 2 cut(s) 2477, 3286
PshBI ATTAAT 2 cut(s) 1881, 3008
PsiI TTATAA 1 cut(s) 1206
Psp1406I AACGTT 2 cut(s) 2227, 2872
Psp5II RGGWCCY 4 cut(s) 713, 1607, 2718, 3701
Psp6I CCWGG 6 cut(s) 706, 794, 1366, 3541, 3697, 4029
PspFI CCCAGC 1 cut(s) 1407
PspGI CCWGG 6 cut(s) 706, 794, 1366, 3541, 3697, 4029
PspPI GGNCC 9 cut(s) 713, 910, 1351, 1370, 1607, 2572, 2718, 2916, 3701
PspPPI RGGWCCY 4 cut(s) 713, 1607, 2718, 3701
PspXI VCTCGAGB 1 cut(s) 1914
PstI CTGCAG 2 cut(s) 259, 1321
PstNI CAGNNNCTG 2 cut(s) 3212, 3704
PsuI RGATCY 1 cut(s) 1933
PsyI GACNNNGTC 1 cut(s) 561
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 7 cut(s) 190, 705, 2179, 2251, 2441, 2884, 3229
RsaNI GTAC 7 cut(s) 189, 704, 2178, 2250, 2440, 2883, 3228
RseI CAYNNNNRTG 2 cut(s) 818, 1101
SacII CCGCGG 1 cut(s) 3626
SalI GTCGAC 1 cut(s) 787
SapI GCTCTTC 3 cut(s) 654, 1132, 2754
Sau96I GGNCC 9 cut(s) 713, 910, 1351, 1370, 1607, 2572, 2718, 2916, 3701
ScaI AGTACT 1 cut(s) 2179
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 7 cut(s) 708, 796, 1368, 1386, 3543, 3699, 4031
SduI GDGCHC 4 cut(s) 436, 1915, 2061, 2485
SfaNI GCATC 6 cut(s) 813, 1030, 1993, 2678, 3839, 3900
SfcI CTRYAG 3 cut(s) 255, 1317, 1611
SfoI GGCGCC 2 cut(s) 3149, 3621
Sfr274I CTCGAG 1 cut(s) 1914
Sfr303I CCGCGG 1 cut(s) 3626
SfuI TTCGAA 2 cut(s) 1330, 3551
SgrBI CCGCGG 1 cut(s) 3626
SinI GGWCC 7 cut(s) 713, 1351, 1370, 1607, 2718, 2916, 3701
SlaI CTCGAG 1 cut(s) 1914
SmiMI CAYNNNNRTG 2 cut(s) 818, 1101
SmlI CTYRAG 4 cut(s) 857, 1914, 2591, 3506
SmoI CTYRAG 4 cut(s) 857, 1914, 2591, 3506
SpeI ACTAGT 3 cut(s) 244, 3332, 3875
SphI GCATGC 2 cut(s) 3309, 3891
SseBI AGGCCT 2 cut(s) 842, 1031
SspDI GGCGCC 2 cut(s) 3147, 3619
SspI AATATT 3 cut(s) 22, 2201, 3400
SspMI CTAG 7 cut(s) 245, 1359, 3062, 3302, 3333, 3411, 3876
StuI AGGCCT 2 cut(s) 842, 1031
StyD4I CCNGG 7 cut(s) 706, 794, 1366, 1384, 3541, 3697, 4029
StyI CCWWGG 8 cut(s) 395, 1272, 2373, 2575, 3656, 3736, 3917, 4050
TaiI ACGT 7 cut(s) 346, 1624, 2230, 2305, 2587, 2875, 3958
TatI WGTACW 3 cut(s) 2177, 2439, 3227
TauI GCSGC 5 cut(s) 326, 623, 2545, 3625, 3925
TfiI GAWTC 7 cut(s) 115, 157, 1327, 1827, 3248, 3869, 4113
TscAI CASTG 4 cut(s) 880, 1321, 1784, 3213
TseFI GTSAC 3 cut(s) 2192, 3265, 3728
TseI GCWGC 8 cut(s) 137, 2144, 2661, 2691, 2744, 2957, 3181, 3527
Tsp45I GTSAC 3 cut(s) 2192, 3265, 3728
TspGWI ACGGA 2 cut(s) 1529, 1740
TspRI CASTG 4 cut(s) 880, 1321, 1784, 3213
Tth111I GACNNNGTC 1 cut(s) 561
Van91I CCANNNNNTGG 1 cut(s) 396
Vha464I CTTAAG 1 cut(s) 857
VpaK11BI GGWCC 7 cut(s) 713, 1351, 1370, 1607, 2718, 2916, 3701
VspI ATTAAT 2 cut(s) 1881, 3008
XagI CCTNNNNNAGG 2 cut(s) 1036, 1793
XceI RCATGY 6 cut(s) 2481, 3290, 3309, 3541, 3891, 4064
XcmI CCANNNNNNNNNTGG 3 cut(s) 397, 3654, 4053
XhoI CTCGAG 1 cut(s) 1914
XmiI GTMKAC 5 cut(s) 318, 788, 2305, 2474, 2633
XmnI GAANNNNTTC 2 cut(s) 1326, 2967
XspI CTAG 7 cut(s) 245, 1359, 3062, 3302, 3333, 3411, 3876
ZrmI AGTACT 1 cut(s) 2179
Zsp2I ATGCAT 3 cut(s) 1137, 2671, 3893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.