ribonuclease H protein At1g65750-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 166 - 266 | 1.4e-15 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 273 |
| AciI | CCGC | 1 cut(s) | 551 |
| AcsI | RAATTY | 2 cut(s) | 46, 83 |
| AcuI | CTGAAG | 1 cut(s) | 850 |
| AcyI | GRCGYC | 1 cut(s) | 712 |
| AfaI | GTAC | 1 cut(s) | 454 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 454 |
| AflIII | ACRYGT | 1 cut(s) | 5 |
| AgsI | TTSAA | 7 cut(s) | 79, 145, 226, 313, 344, 614, 653 |
| AjiI | CACGTC | 1 cut(s) | 703 |
| AjnI | CCWGG | 2 cut(s) | 193, 435 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 18, 50, 848 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 232, 264 |
| AluBI | AGCT | 5 cut(s) | 68, 262, 332, 584, 743 |
| AluI | AGCT | 5 cut(s) | 68, 262, 332, 584, 743 |
| Alw21I | GWGCWC | 1 cut(s) | 415 |
| Alw26I | GTCTC | 1 cut(s) | 44 |
| Alw44I | GTGCAC | 1 cut(s) | 411 |
| AoxI | GGCC | 2 cut(s) | 191, 618 |
| ApaLI | GTGCAC | 1 cut(s) | 411 |
| ApeKI | GCWGC | 2 cut(s) | 752, 824 |
| ApoI | RAATTY | 2 cut(s) | 46, 83 |
| AseI | ATTAAT | 1 cut(s) | 404 |
| AsuC2I | CCSGG | 1 cut(s) | 53 |
| BaeGI | GKGCMC | 1 cut(s) | 415 |
| BanI | GGYRCC | 1 cut(s) | 273 |
| Bbv12I | GWGCWC | 1 cut(s) | 415 |
| BbvI | GCAGC | 2 cut(s) | 739, 836 |
| BccI | CCATC | 3 cut(s) | 141, 452, 491 |
| BciT130I | CCWGG | 2 cut(s) | 195, 437 |
| BcnI | CCSGG | 1 cut(s) | 53 |
| BcoDI | GTCTC | 1 cut(s) | 44 |
| BfmI | CTRYAG | 1 cut(s) | 324 |
| BisI | GCNGC | 2 cut(s) | 753, 825 |
| BlsI | GCNGC | 2 cut(s) | 754, 826 |
| Bme1390I | CCNGG | 3 cut(s) | 53, 195, 437 |
| BmgBI | CACGTC | 1 cut(s) | 703 |
| BmiI | GGNNCC | 1 cut(s) | 275 |
| BmrFI | CCNGG | 3 cut(s) | 53, 195, 437 |
| BpuEI | CTTGAG | 1 cut(s) | 26 |
| BpuMI | CCSGG | 1 cut(s) | 53 |
| BsaHI | GRCGYC | 1 cut(s) | 712 |
| BsaI | GGTCTC | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 2 cut(s) | 111, 707 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 458, 488 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 454 |
| Bse1I | ACTGG | 2 cut(s) | 621, 850 |
| Bse3DI | GCAATG | 1 cut(s) | 242 |
| BseBI | CCWGG | 2 cut(s) | 195, 437 |
| BseDI | CCNNGG | 2 cut(s) | 111, 707 |
| BseGI | GGATG | 3 cut(s) | 97, 430, 463 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseMI | GCAATG | 1 cut(s) | 242 |
| BseMII | CTCAG | 1 cut(s) | 576 |
| BseNI | ACTGG | 2 cut(s) | 621, 850 |
| BseSI | GKGCMC | 1 cut(s) | 415 |
| BseXI | GCAGC | 2 cut(s) | 739, 836 |
| BshFI | GGCC | 2 cut(s) | 193, 620 |
| BshNI | GGYRCC | 1 cut(s) | 273 |
| BsiHKAI | GWGCWC | 1 cut(s) | 415 |
| BsiSI | CCGG | 1 cut(s) | 53 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BsmAI | GTCTC | 1 cut(s) | 44 |
| BsmI | GAATGC | 1 cut(s) | 637 |
| BsnI | GGCC | 2 cut(s) | 193, 620 |
| Bso31I | GGTCTC | 1 cut(s) | 44 |
| Bsp1286I | GDGCHC | 1 cut(s) | 415 |
| Bsp143I | GATC | 2 cut(s) | 304, 520 |
| Bsp19I | CCATGG | 2 cut(s) | 111, 707 |
| BspACI | CCGC | 1 cut(s) | 551 |
| BspANI | GGCC | 2 cut(s) | 193, 620 |
| BspCNI | CTCAG | 1 cut(s) | 577 |
| BspLI | GGNNCC | 1 cut(s) | 275 |
| BspT107I | GGYRCC | 1 cut(s) | 273 |
| BspTNI | GGTCTC | 1 cut(s) | 44 |
| BsrDI | GCAATG | 1 cut(s) | 242 |
| BsrI | ACTGG | 2 cut(s) | 621, 850 |
| BssECI | CCNNGG | 2 cut(s) | 111, 707 |
| BssMI | GATC | 2 cut(s) | 304, 520 |
| BssNI | GRCGYC | 1 cut(s) | 712 |
| BssT1I | CCWWGG | 2 cut(s) | 111, 707 |
| Bst2UI | CCWGG | 2 cut(s) | 195, 437 |
| Bst4CI | ACNGT | 1 cut(s) | 328 |
| BstACI | GRCGYC | 1 cut(s) | 712 |
| BstC8I | GCNNGC | 2 cut(s) | 385, 594 |
| BstDEI | CTNAG | 1 cut(s) | 585 |
| BstDSI | CCRYGG | 2 cut(s) | 111, 707 |
| BstF5I | GGATG | 3 cut(s) | 97, 430, 463 |
| BstKTI | GATC | 2 cut(s) | 307, 523 |
| BstMAI | GTCTC | 1 cut(s) | 44 |
| BstMBI | GATC | 2 cut(s) | 304, 520 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 581, 749, 824 |
| BstNI | CCWGG | 2 cut(s) | 195, 437 |
| BstNSI | RCATGY | 1 cut(s) | 9 |
| BstSCI | CCNGG | 3 cut(s) | 51, 193, 435 |
| BstSFI | CTRYAG | 1 cut(s) | 324 |
| BstSLI | GKGCMC | 1 cut(s) | 415 |
| BstV1I | GCAGC | 2 cut(s) | 739, 836 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 616 |
| BsuRI | GGCC | 2 cut(s) | 193, 620 |
| BtgI | CCRYGG | 2 cut(s) | 111, 707 |
| BtrI | CACGTC | 1 cut(s) | 703 |
| BtsCI | GGATG | 3 cut(s) | 97, 430, 463 |
| Cac8I | GCNNGC | 2 cut(s) | 385, 594 |
| CseI | GACGC | 1 cut(s) | 701 |
| Csp6I | GTAC | 1 cut(s) | 453 |
| CviAII | CATG | 6 cut(s) | 6, 112, 162, 605, 697, 708 |
| CviQI | GTAC | 1 cut(s) | 453 |
| DdeI | CTNAG | 1 cut(s) | 585 |
| DpnI | GATC | 2 cut(s) | 306, 522 |
| DpnII | GATC | 2 cut(s) | 304, 520 |
| Eco130I | CCWWGG | 2 cut(s) | 111, 707 |
| Eco31I | GGTCTC | 1 cut(s) | 44 |
| Eco57I | CTGAAG | 1 cut(s) | 850 |
| EcoRII | CCWGG | 2 cut(s) | 193, 435 |
| EcoT14I | CCWWGG | 2 cut(s) | 111, 707 |
| ErhI | CCWWGG | 2 cut(s) | 111, 707 |
| FaeI | CATG | 6 cut(s) | 9, 115, 165, 608, 700, 711 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 18, 50, 251, 283 |
| FatI | CATG | 6 cut(s) | 5, 111, 161, 604, 696, 707 |
| FauI | CCCGC | 1 cut(s) | 544 |
| Fnu4HI | GCNGC | 2 cut(s) | 753, 825 |
| FokI | GGATG | 3 cut(s) | 104, 437, 470 |
| Fsp4HI | GCNGC | 2 cut(s) | 753, 825 |
| GluI | GCNGC | 2 cut(s) | 753, 825 |
| HaeIII | GGCC | 2 cut(s) | 193, 620 |
| HapII | CCGG | 1 cut(s) | 53 |
| HgaI | GACGC | 1 cut(s) | 701 |
| Hin1I | GRCGYC | 1 cut(s) | 712 |
| Hin1II | CATG | 6 cut(s) | 9, 115, 165, 608, 700, 711 |
| HindIII | AAGCTT | 2 cut(s) | 66, 260 |
| HinfI | GANTC | 4 cut(s) | 349, 659, 673, 800 |
| HpaII | CCGG | 1 cut(s) | 53 |
| Hpy166II | GTNNAC | 1 cut(s) | 413 |
| Hpy188I | TCNGA | 3 cut(s) | 253, 358, 518 |
| Hpy188III | TCNNGA | 4 cut(s) | 43, 76, 215, 785 |
| Hpy8I | GTNNAC | 1 cut(s) | 413 |
| HpyAV | CCTTC | 2 cut(s) | 20, 782 |
| HpyCH4III | ACNGT | 1 cut(s) | 328 |
| HpyCH4IV | ACGT | 1 cut(s) | 702 |
| HpyCH4V | TGCA | 7 cut(s) | 165, 400, 413, 491, 596, 818, 824 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 581, 749, 824 |
| HpyF3I | CTNAG | 1 cut(s) | 585 |
| HpySE526I | ACGT | 1 cut(s) | 702 |
| Hsp92I | GRCGYC | 1 cut(s) | 712 |
| Hsp92II | CATG | 6 cut(s) | 9, 115, 165, 608, 700, 711 |
| Kzo9I | GATC | 2 cut(s) | 304, 520 |
| Lsp1109I | GCAGC | 2 cut(s) | 739, 836 |
| MaeII | ACGT | 1 cut(s) | 702 |
| MaeIII | GTNAC | 1 cut(s) | 167 |
| MalI | GATC | 2 cut(s) | 306, 522 |
| MboI | GATC | 2 cut(s) | 304, 520 |
| MboII | GAAGA | 5 cut(s) | 91, 96, 99, 174, 285 |
| MfeI | CAATTG | 1 cut(s) | 819 |
| MhlI | GDGCHC | 1 cut(s) | 415 |
| MluCI | AATT | 9 cut(s) | 46, 83, 280, 394, 401, 405, 429, 733, 819 |
| MmeI | TCCRAC | 1 cut(s) | 344 |
| MnlI | CCTC | 6 cut(s) | 23, 216, 460, 500, 631, 819 |
| MseI | TTAA | 6 cut(s) | 60, 98, 404, 693, 732, 842 |
| MslI | CAYNNNNRTG | 1 cut(s) | 701 |
| MspI | CCGG | 1 cut(s) | 53 |
| MspR9I | CCNGG | 3 cut(s) | 53, 195, 437 |
| MunI | CAATTG | 1 cut(s) | 819 |
| Mva1269I | GAATGC | 1 cut(s) | 637 |
| MvaI | CCWGG | 2 cut(s) | 195, 437 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 581, 749, 824 |
| NciI | CCSGG | 1 cut(s) | 53 |
| NcoI | CCATGG | 2 cut(s) | 111, 707 |
| NdeII | GATC | 2 cut(s) | 304, 520 |
| NlaIII | CATG | 6 cut(s) | 9, 115, 165, 608, 700, 711 |
| NlaIV | GGNNCC | 1 cut(s) | 275 |
| NspI | RCATGY | 1 cut(s) | 9 |
| PciI | ACATGT | 1 cut(s) | 5 |
| PctI | GAATGC | 1 cut(s) | 637 |
| PfeI | GAWTC | 4 cut(s) | 349, 659, 673, 800 |
| PkrI | GCNGC | 2 cut(s) | 754, 826 |
| PscI | ACATGT | 1 cut(s) | 5 |
| PshBI | ATTAAT | 1 cut(s) | 404 |
| Psp6I | CCWGG | 2 cut(s) | 193, 435 |
| PspGI | CCWGG | 2 cut(s) | 193, 435 |
| PspN4I | GGNNCC | 1 cut(s) | 275 |
| RsaI | GTAC | 1 cut(s) | 454 |
| RsaNI | GTAC | 1 cut(s) | 453 |
| RseI | CAYNNNNRTG | 1 cut(s) | 701 |
| SaqAI | TTAA | 6 cut(s) | 60, 98, 404, 693, 732, 842 |
| SatI | GCNGC | 2 cut(s) | 753, 825 |
| Sau3AI | GATC | 2 cut(s) | 304, 520 |
| ScrFI | CCNGG | 3 cut(s) | 53, 195, 437 |
| SduI | GDGCHC | 1 cut(s) | 415 |
| SfcI | CTRYAG | 1 cut(s) | 324 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 701 |
| SmlI | CTYRAG | 1 cut(s) | 41 |
| SmoI | CTYRAG | 1 cut(s) | 41 |
| Sse9I | AATT | 9 cut(s) | 46, 83, 280, 394, 401, 405, 429, 733, 819 |
| SsiI | CCGC | 1 cut(s) | 551 |
| SspI | AATATT | 1 cut(s) | 316 |
| StyD4I | CCNGG | 3 cut(s) | 51, 193, 435 |
| StyI | CCWWGG | 2 cut(s) | 111, 707 |
| TaaI | ACNGT | 1 cut(s) | 328 |
| TaiI | ACGT | 1 cut(s) | 705 |
| TaqI | TCGA | 3 cut(s) | 119, 641, 739 |
| TasI | AATT | 9 cut(s) | 46, 83, 280, 394, 401, 405, 429, 733, 819 |
| TfiI | GAWTC | 4 cut(s) | 349, 659, 673, 800 |
| Tru1I | TTAA | 6 cut(s) | 60, 98, 404, 693, 732, 842 |
| Tru9I | TTAA | 6 cut(s) | 60, 98, 404, 693, 732, 842 |
| TseI | GCWGC | 2 cut(s) | 752, 824 |
| TspDTI | ATGAA | 6 cut(s) | 39, 352, 441, 593, 675, 773 |
| TspGWI | ACGGA | 1 cut(s) | 470 |
| VneI | GTGCAC | 1 cut(s) | 411 |
| VspI | ATTAAT | 1 cut(s) | 404 |
| XapI | RAATTY | 2 cut(s) | 46, 83 |
| XceI | RCATGY | 1 cut(s) | 9 |