Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 83 - 184 | 6e-10 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 433 |
| AccI | GTMKAC | 1 cut(s) | 58 |
| AciI | CCGC | 1 cut(s) | 329 |
| AcsI | RAATTY | 2 cut(s) | 108, 547 |
| AcvI | CACGTG | 1 cut(s) | 310 |
| AfaI | GTAC | 1 cut(s) | 360 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 224, 562 |
| AgsI | TTSAA | 5 cut(s) | 68, 107, 151, 626, 668 |
| AjiI | CACGTC | 1 cut(s) | 182 |
| AjnI | CCWGG | 1 cut(s) | 525 |
| AluBI | AGCT | 6 cut(s) | 53, 139, 278, 353, 430, 585 |
| AluI | AGCT | 6 cut(s) | 53, 139, 278, 353, 430, 585 |
| Alw21I | GWGCWC | 1 cut(s) | 187 |
| Alw26I | GTCTC | 2 cut(s) | 169, 246 |
| AoxI | GGCC | 1 cut(s) | 553 |
| ApeKI | GCWGC | 1 cut(s) | 314 |
| ApoI | RAATTY | 2 cut(s) | 108, 547 |
| AsuHPI | GGTGA | 2 cut(s) | 214, 343 |
| BanI | GGYRCC | 1 cut(s) | 433 |
| BbrPI | CACGTG | 1 cut(s) | 310 |
| Bbv12I | GWGCWC | 1 cut(s) | 187 |
| BbvCI | CCTCAGC | 1 cut(s) | 426 |
| BbvI | GCAGC | 1 cut(s) | 326 |
| BccI | CCATC | 2 cut(s) | 242, 633 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 494, 528 |
| BciT130I | CCWGG | 1 cut(s) | 527 |
| BcoDI | GTCTC | 2 cut(s) | 169, 246 |
| BfaI | CTAG | 2 cut(s) | 50, 177 |
| BfmI | CTRYAG | 1 cut(s) | 78 |
| BisI | GCNGC | 1 cut(s) | 315 |
| BlsI | GCNGC | 1 cut(s) | 316 |
| Bme1390I | CCNGG | 1 cut(s) | 527 |
| BmgBI | CACGTC | 1 cut(s) | 182 |
| BmiI | GGNNCC | 1 cut(s) | 435 |
| BmrFI | CCNGG | 1 cut(s) | 527 |
| BmsI | GCATC | 2 cut(s) | 275, 526 |
| BpmI | CTGGAG | 1 cut(s) | 277 |
| Bpu10I | CCTNAGC | 1 cut(s) | 426 |
| BsaAI | YACGTR | 2 cut(s) | 310, 362 |
| BsaI | GGTCTC | 1 cut(s) | 169 |
| BsaJI | CCNNGG | 1 cut(s) | 437 |
| BsaWI | WCCGGW | 1 cut(s) | 269 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 224, 562 |
| Bse1I | ACTGG | 1 cut(s) | 260 |
| Bse3DI | GCAATG | 1 cut(s) | 449 |
| BseBI | CCWGG | 1 cut(s) | 527 |
| BseDI | CCNNGG | 1 cut(s) | 437 |
| BseGI | GGATG | 1 cut(s) | 266 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 224, 562 |
| BseMI | GCAATG | 1 cut(s) | 449 |
| BseMII | CTCAG | 1 cut(s) | 440 |
| BseNI | ACTGG | 1 cut(s) | 260 |
| BseRI | GAGGAG | 2 cut(s) | 414, 490 |
| BseXI | GCAGC | 1 cut(s) | 326 |
| BseYI | CCCAGC | 1 cut(s) | 228 |
| BshFI | GGCC | 1 cut(s) | 555 |
| BshNI | GGYRCC | 1 cut(s) | 433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 187 |
| BsiSI | CCGG | 1 cut(s) | 270 |
| BslFI | GGGAC | 1 cut(s) | 577 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 224, 562 |
| BsmAI | GTCTC | 2 cut(s) | 169, 246 |
| BsmFI | GGGAC | 1 cut(s) | 577 |
| BsnI | GGCC | 1 cut(s) | 555 |
| Bso31I | GGTCTC | 1 cut(s) | 169 |
| Bsp1286I | GDGCHC | 1 cut(s) | 187 |
| BspACI | CCGC | 1 cut(s) | 329 |
| BspANI | GGCC | 1 cut(s) | 555 |
| BspCNI | CTCAG | 1 cut(s) | 439 |
| BspLI | GGNNCC | 1 cut(s) | 435 |
| BspMAI | CTGCAG | 1 cut(s) | 82 |
| BspQI | GCTCTTC | 1 cut(s) | 662 |
| BspT107I | GGYRCC | 1 cut(s) | 433 |
| BspTNI | GGTCTC | 1 cut(s) | 169 |
| BsrDI | GCAATG | 1 cut(s) | 449 |
| BsrI | ACTGG | 1 cut(s) | 260 |
| BssECI | CCNNGG | 1 cut(s) | 437 |
| BssNAI | GTATAC | 1 cut(s) | 59 |
| BssT1I | CCWWGG | 1 cut(s) | 437 |
| Bst1107I | GTATAC | 1 cut(s) | 59 |
| Bst2UI | CCWGG | 1 cut(s) | 527 |
| Bst4CI | ACNGT | 1 cut(s) | 476 |
| Bst6I | CTCTTC | 3 cut(s) | 34, 146, 662 |
| BstBAI | YACGTR | 2 cut(s) | 310, 362 |
| BstC8I | GCNNGC | 1 cut(s) | 568 |
| BstDEI | CTNAG | 1 cut(s) | 426 |
| BstF5I | GGATG | 1 cut(s) | 266 |
| BstMAI | GTCTC | 2 cut(s) | 169, 246 |
| BstNI | CCWGG | 1 cut(s) | 527 |
| BstSCI | CCNGG | 1 cut(s) | 525 |
| BstSFI | CTRYAG | 1 cut(s) | 78 |
| BstV1I | GCAGC | 1 cut(s) | 326 |
| BstZ17I | GTATAC | 1 cut(s) | 59 |
| BsuRI | GGCC | 1 cut(s) | 555 |
| BtrI | CACGTC | 1 cut(s) | 182 |
| BtsCI | GGATG | 1 cut(s) | 266 |
| BtsIMutI | CAGTG | 2 cut(s) | 243, 472 |
| Cac8I | GCNNGC | 1 cut(s) | 568 |
| CsiI | ACCWGGT | 1 cut(s) | 525 |
| Csp6I | GTAC | 1 cut(s) | 359 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviQI | GTAC | 1 cut(s) | 359 |
| DdeI | CTNAG | 1 cut(s) | 426 |
| Eam1104I | CTCTTC | 3 cut(s) | 34, 146, 662 |
| EarI | CTCTTC | 3 cut(s) | 34, 146, 662 |
| Eco130I | CCWWGG | 1 cut(s) | 437 |
| Eco31I | GGTCTC | 1 cut(s) | 169 |
| Eco72I | CACGTG | 1 cut(s) | 310 |
| EcoRII | CCWGG | 1 cut(s) | 525 |
| EcoT14I | CCWWGG | 1 cut(s) | 437 |
| EcoT22I | ATGCAT | 1 cut(s) | 492 |
| ErhI | CCWWGG | 1 cut(s) | 437 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 6 cut(s) | 36, 59, 135, 375, 377, 603 |
| FaqI | GGGAC | 1 cut(s) | 577 |
| FatI | CATG | 1 cut(s) | 133 |
| FauNDI | CATATG | 1 cut(s) | 375 |
| FblI | GTMKAC | 1 cut(s) | 58 |
| Fnu4HI | GCNGC | 1 cut(s) | 315 |
| FokI | GGATG | 1 cut(s) | 253 |
| Fsp4HI | GCNGC | 1 cut(s) | 315 |
| FspBI | CTAG | 2 cut(s) | 50, 177 |
| GluI | GCNGC | 1 cut(s) | 315 |
| GsaI | CCCAGC | 1 cut(s) | 232 |
| GsuI | CTGGAG | 1 cut(s) | 277 |
| HaeIII | GGCC | 1 cut(s) | 555 |
| HapII | CCGG | 1 cut(s) | 270 |
| Hin1II | CATG | 1 cut(s) | 137 |
| HindIII | AAGCTT | 1 cut(s) | 583 |
| HinfI | GANTC | 4 cut(s) | 42, 90, 392, 403 |
| HpaII | CCGG | 1 cut(s) | 270 |
| HphI | GGTGA | 2 cut(s) | 214, 343 |
| Hpy166II | GTNNAC | 2 cut(s) | 59, 158 |
| Hpy188I | TCNGA | 1 cut(s) | 89 |
| Hpy188III | TCNNGA | 3 cut(s) | 104, 299, 515 |
| Hpy8I | GTNNAC | 2 cut(s) | 59, 158 |
| HpyAV | CCTTC | 1 cut(s) | 512 |
| HpyCH4III | ACNGT | 1 cut(s) | 476 |
| HpyCH4IV | ACGT | 4 cut(s) | 181, 309, 361, 590 |
| HpyCH4V | TGCA | 7 cut(s) | 80, 133, 266, 472, 490, 533, 545 |
| HpyF3I | CTNAG | 1 cut(s) | 426 |
| HpySE526I | ACGT | 4 cut(s) | 181, 309, 361, 590 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| LguI | GCTCTTC | 1 cut(s) | 662 |
| LmnI | GCTCC | 1 cut(s) | 190 |
| LpnPI | CCDG | 9 cut(s) | 146, 214, 241, 264, 283, 416, 512, 539, 552 |
| Lsp1109I | GCAGC | 1 cut(s) | 326 |
| LweI | GCATC | 2 cut(s) | 275, 526 |
| MabI | ACCWGGT | 1 cut(s) | 525 |
| MaeI | CTAG | 2 cut(s) | 50, 177 |
| MaeII | ACGT | 4 cut(s) | 181, 309, 361, 590 |
| MboII | GAAGA | 6 cut(s) | 51, 163, 387, 552, 649, 656 |
| MfeI | CAATTG | 1 cut(s) | 342 |
| MhlI | GDGCHC | 1 cut(s) | 187 |
| MlyI | GAGTC | 2 cut(s) | 51, 84 |
| MnlI | CCTC | 5 cut(s) | 193, 225, 435, 511, 607 |
| Mph1103I | ATGCAT | 1 cut(s) | 492 |
| MseI | TTAA | 8 cut(s) | 11, 221, 234, 240, 336, 383, 408, 673 |
| MspA1I | CMGCKG | 1 cut(s) | 430 |
| MspI | CCGG | 1 cut(s) | 270 |
| MspR9I | CCNGG | 1 cut(s) | 527 |
| MunI | CAATTG | 1 cut(s) | 342 |
| MvaI | CCWGG | 1 cut(s) | 527 |
| NdeI | CATATG | 1 cut(s) | 375 |
| NlaIII | CATG | 1 cut(s) | 137 |
| NlaIV | GGNNCC | 1 cut(s) | 435 |
| NsiI | ATGCAT | 1 cut(s) | 492 |
| PciSI | GCTCTTC | 1 cut(s) | 662 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 187 |
| PfeI | GAWTC | 2 cut(s) | 392, 403 |
| PkrI | GCNGC | 1 cut(s) | 316 |
| PleI | GAGTC | 2 cut(s) | 50, 84 |
| PmaCI | CACGTG | 1 cut(s) | 310 |
| PmlI | CACGTG | 1 cut(s) | 310 |
| PpsI | GAGTC | 2 cut(s) | 50, 84 |
| Ppu21I | YACGTR | 2 cut(s) | 310, 362 |
| Psp6I | CCWGG | 1 cut(s) | 525 |
| PspCI | CACGTG | 1 cut(s) | 310 |
| PspFI | CCCAGC | 1 cut(s) | 228 |
| PspGI | CCWGG | 1 cut(s) | 525 |
| PspN4I | GGNNCC | 1 cut(s) | 435 |
| PstI | CTGCAG | 1 cut(s) | 82 |
| PvuII | CAGCTG | 1 cut(s) | 430 |
| RsaI | GTAC | 1 cut(s) | 360 |
| RsaNI | GTAC | 1 cut(s) | 359 |
| SapI | GCTCTTC | 1 cut(s) | 662 |
| SaqAI | TTAA | 8 cut(s) | 11, 221, 234, 240, 336, 383, 408, 673 |
| SatI | GCNGC | 1 cut(s) | 315 |
| SchI | GAGTC | 2 cut(s) | 51, 84 |
| ScrFI | CCNGG | 1 cut(s) | 527 |
| SduI | GDGCHC | 1 cut(s) | 187 |
| SexAI | ACCWGGT | 1 cut(s) | 525 |
| SfaNI | GCATC | 2 cut(s) | 275, 526 |
| SfcI | CTRYAG | 1 cut(s) | 78 |
| SsiI | CCGC | 1 cut(s) | 329 |
| SspI | AATATT | 1 cut(s) | 98 |
| SspMI | CTAG | 2 cut(s) | 50, 177 |
| StyD4I | CCNGG | 1 cut(s) | 525 |
| StyI | CCWWGG | 1 cut(s) | 437 |
| TaaI | ACNGT | 1 cut(s) | 476 |
| TaiI | ACGT | 4 cut(s) | 184, 312, 364, 593 |
| TfiI | GAWTC | 2 cut(s) | 392, 403 |
| Tru1I | TTAA | 8 cut(s) | 11, 221, 234, 240, 336, 383, 408, 673 |
| Tru9I | TTAA | 8 cut(s) | 11, 221, 234, 240, 336, 383, 408, 673 |
| TscAI | CASTG | 2 cut(s) | 250, 479 |
| TseI | GCWGC | 1 cut(s) | 314 |
| TspRI | CASTG | 2 cut(s) | 250, 479 |
| XapI | RAATTY | 2 cut(s) | 108, 547 |
| XmiI | GTMKAC | 1 cut(s) | 58 |
| XspI | CTAG | 2 cut(s) | 50, 177 |
| Zsp2I | ATGCAT | 1 cut(s) | 492 |