ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 249 |
| AccI | GTMKAC | 1 cut(s) | 241 |
| AccII | CGCG | 2 cut(s) | 6, 514 |
| AciI | CCGC | 9 cut(s) | 6, 9, 59, 65, 208, 266, 338, 478, 487 |
| AclWI | GGATC | 2 cut(s) | 166, 176 |
| AcsI | RAATTY | 2 cut(s) | 582, 686 |
| AfaI | GTAC | 1 cut(s) | 53 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 55, 91, 92 |
| AflIII | ACRYGT | 2 cut(s) | 352, 512 |
| AgsI | TTSAA | 3 cut(s) | 366, 652, 686 |
| AjiI | CACGTC | 2 cut(s) | 245, 353 |
| AjnI | CCWGG | 3 cut(s) | 85, 289, 448 |
| AluBI | AGCT | 1 cut(s) | 661 |
| AluI | AGCT | 1 cut(s) | 661 |
| Alw26I | GTCTC | 1 cut(s) | 486 |
| AlwI | GGATC | 2 cut(s) | 166, 176 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 124 |
| AoxI | GGCC | 1 cut(s) | 562 |
| ApeKI | GCWGC | 2 cut(s) | 217, 457 |
| ApoI | RAATTY | 2 cut(s) | 582, 686 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| AspS9I | GGNCC | 3 cut(s) | 228, 251, 563 |
| AsuHPI | GGTGA | 1 cut(s) | 590 |
| AvaII | GGWCC | 2 cut(s) | 228, 251 |
| BbsI | GAAGAC | 1 cut(s) | 311 |
| BbvI | GCAGC | 2 cut(s) | 229, 469 |
| BccI | CCATC | 2 cut(s) | 533, 658 |
| BceAI | ACGGC | 2 cut(s) | 72, 585 |
| BciT130I | CCWGG | 3 cut(s) | 87, 291, 450 |
| BcoDI | GTCTC | 1 cut(s) | 486 |
| BisI | GCNGC | 3 cut(s) | 7, 218, 458 |
| BlsI | GCNGC | 3 cut(s) | 8, 219, 459 |
| Bme1390I | CCNGG | 3 cut(s) | 87, 291, 450 |
| Bme18I | GGWCC | 2 cut(s) | 228, 251 |
| BmgBI | CACGTC | 2 cut(s) | 245, 353 |
| BmgT120I | GGNCC | 3 cut(s) | 228, 251, 563 |
| BmiI | GGNNCC | 2 cut(s) | 447, 504 |
| BmrFI | CCNGG | 3 cut(s) | 87, 291, 450 |
| BpiI | GAAGAC | 1 cut(s) | 311 |
| BsaI | GGTCTC | 1 cut(s) | 486 |
| BsaJI | CCNNGG | 4 cut(s) | 85, 289, 449, 518 |
| BsaWI | WCCGGW | 1 cut(s) | 48 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 229, 259, 270, 300 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 55, 91, 92 |
| Bse118I | RCCGGY | 1 cut(s) | 460 |
| Bse3DI | GCAATG | 2 cut(s) | 73, 649 |
| BseBI | CCWGG | 3 cut(s) | 87, 291, 450 |
| BseDI | CCNNGG | 4 cut(s) | 85, 289, 449, 518 |
| BseGI | GGATG | 1 cut(s) | 389 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 55, 91, 92 |
| BseMI | GCAATG | 2 cut(s) | 73, 649 |
| BseXI | GCAGC | 2 cut(s) | 229, 469 |
| BsgI | GTGCAG | 2 cut(s) | 236, 476 |
| Bsh1236I | CGCG | 2 cut(s) | 6, 514 |
| Bsh1285I | CGRYCG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 564 |
| BsiEI | CGRYCG | 1 cut(s) | 134 |
| BsiSI | CCGG | 3 cut(s) | 49, 254, 461 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 55, 91, 92 |
| BsmAI | GTCTC | 1 cut(s) | 486 |
| BsnI | GGCC | 1 cut(s) | 564 |
| Bso31I | GGTCTC | 1 cut(s) | 486 |
| Bsp143I | GATC | 2 cut(s) | 171, 181 |
| Bsp19I | CCATGG | 1 cut(s) | 518 |
| BspACI | CCGC | 9 cut(s) | 6, 9, 59, 65, 208, 266, 338, 478, 487 |
| BspANI | GGCC | 1 cut(s) | 564 |
| BspFNI | CGCG | 2 cut(s) | 6, 514 |
| BspLI | GGNNCC | 2 cut(s) | 447, 504 |
| BspPI | GGATC | 2 cut(s) | 166, 176 |
| BspTNI | GGTCTC | 1 cut(s) | 486 |
| BsrDI | GCAATG | 2 cut(s) | 73, 649 |
| BsrFI | RCCGGY | 1 cut(s) | 460 |
| BssAI | RCCGGY | 1 cut(s) | 460 |
| BssECI | CCNNGG | 4 cut(s) | 85, 289, 449, 518 |
| BssMI | GATC | 2 cut(s) | 171, 181 |
| BssT1I | CCWWGG | 1 cut(s) | 518 |
| Bst2UI | CCWGG | 3 cut(s) | 87, 291, 450 |
| BstC8I | GCNNGC | 1 cut(s) | 67 |
| BstDEI | CTNAG | 1 cut(s) | 347 |
| BstDSI | CCRYGG | 1 cut(s) | 518 |
| BstF5I | GGATG | 1 cut(s) | 389 |
| BstFNI | CGCG | 2 cut(s) | 6, 514 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstKTI | GATC | 2 cut(s) | 174, 184 |
| BstMAI | GTCTC | 1 cut(s) | 486 |
| BstMBI | GATC | 2 cut(s) | 171, 181 |
| BstMCI | CGRYCG | 1 cut(s) | 134 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 75, 214, 254, 263, 445, 454, 561 |
| BstNI | CCWGG | 3 cut(s) | 87, 291, 450 |
| BstSCI | CCNGG | 3 cut(s) | 85, 289, 448 |
| BstUI | CGCG | 2 cut(s) | 6, 514 |
| BstV1I | GCAGC | 2 cut(s) | 229, 469 |
| BstV2I | GAAGAC | 1 cut(s) | 311 |
| BsuRI | GGCC | 1 cut(s) | 564 |
| BtgI | CCRYGG | 1 cut(s) | 518 |
| BtrI | CACGTC | 2 cut(s) | 245, 353 |
| BtsCI | GGATG | 1 cut(s) | 389 |
| Cac8I | GCNNGC | 1 cut(s) | 67 |
| CaiI | CAGNNNCTG | 1 cut(s) | 124 |
| CfoI | GCGC | 1 cut(s) | 6 |
| Cfr10I | RCCGGY | 1 cut(s) | 460 |
| Cfr13I | GGNCC | 3 cut(s) | 228, 251, 563 |
| CseI | GACGC | 1 cut(s) | 503 |
| Csp6I | GTAC | 1 cut(s) | 52 |
| CviAII | CATG | 2 cut(s) | 519, 701 |
| CviQI | GTAC | 1 cut(s) | 52 |
| DdeI | CTNAG | 1 cut(s) | 347 |
| DpnI | GATC | 2 cut(s) | 173, 183 |
| DpnII | GATC | 2 cut(s) | 171, 181 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 249 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 249 |
| EciI | GGCGGA | 2 cut(s) | 24, 74 |
| Eco130I | CCWWGG | 1 cut(s) | 518 |
| Eco31I | GGTCTC | 1 cut(s) | 486 |
| Eco47I | GGWCC | 2 cut(s) | 228, 251 |
| EcoRII | CCWGG | 3 cut(s) | 85, 289, 448 |
| EcoT14I | CCWWGG | 1 cut(s) | 518 |
| ErhI | CCWWGG | 1 cut(s) | 518 |
| FaeI | CATG | 2 cut(s) | 522, 704 |
| FaiI | YATR | 6 cut(s) | 301, 312, 499, 520, 609, 702 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 543, 575 |
| FatI | CATG | 2 cut(s) | 518, 700 |
| FauI | CCCGC | 3 cut(s) | 58, 259, 494 |
| FblI | GTMKAC | 1 cut(s) | 241 |
| Fnu4HI | GCNGC | 3 cut(s) | 7, 218, 458 |
| FokI | GGATG | 1 cut(s) | 376 |
| Fsp4HI | GCNGC | 3 cut(s) | 7, 218, 458 |
| GlaI | GCGC | 1 cut(s) | 5 |
| GluI | GCNGC | 3 cut(s) | 7, 218, 458 |
| HaeIII | GGCC | 1 cut(s) | 564 |
| HapII | CCGG | 3 cut(s) | 49, 254, 461 |
| HgaI | GACGC | 1 cut(s) | 503 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin1II | CATG | 2 cut(s) | 522, 704 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| HincII | GTYRAC | 1 cut(s) | 242 |
| HindII | GTYRAC | 1 cut(s) | 242 |
| HinfI | GANTC | 3 cut(s) | 165, 238, 428 |
| HpaII | CCGG | 3 cut(s) | 49, 254, 461 |
| HphI | GGTGA | 1 cut(s) | 590 |
| Hpy166II | GTNNAC | 3 cut(s) | 54, 242, 387 |
| Hpy188I | TCNGA | 3 cut(s) | 109, 147, 658 |
| Hpy188III | TCNNGA | 2 cut(s) | 169, 235 |
| Hpy8I | GTNNAC | 3 cut(s) | 54, 242, 387 |
| Hpy99I | CGWCG | 4 cut(s) | 182, 194, 236, 246 |
| HpyAV | CCTTC | 2 cut(s) | 96, 351 |
| HpyCH4IV | ACGT | 2 cut(s) | 244, 352 |
| HpyCH4V | TGCA | 4 cut(s) | 217, 457, 692, 700 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 75, 214, 254, 263, 445, 454, 561 |
| HpyF3I | CTNAG | 1 cut(s) | 347 |
| HpySE526I | ACGT | 2 cut(s) | 244, 352 |
| Hsp92II | CATG | 2 cut(s) | 522, 704 |
| HspAI | GCGC | 1 cut(s) | 4 |
| Kzo9I | GATC | 2 cut(s) | 171, 181 |
| LmnI | GCTCC | 4 cut(s) | 279, 291, 445, 658 |
| Lsp1109I | GCAGC | 2 cut(s) | 229, 469 |
| MaeII | ACGT | 2 cut(s) | 244, 352 |
| MalI | GATC | 2 cut(s) | 173, 183 |
| MboI | GATC | 2 cut(s) | 171, 181 |
| MboII | GAAGA | 1 cut(s) | 316 |
| MluCI | AATT | 4 cut(s) | 433, 582, 652, 686 |
| MluI | ACGCGT | 1 cut(s) | 512 |
| MlyI | GAGTC | 1 cut(s) | 247 |
| MmeI | TCCRAC | 2 cut(s) | 405, 533 |
| MnlI | CCTC | 9 cut(s) | 5, 34, 55, 107, 114, 405, 414, 516, 608 |
| MseI | TTAA | 1 cut(s) | 381 |
| MslI | CAYNNNNRTG | 1 cut(s) | 699 |
| MspI | CCGG | 3 cut(s) | 49, 254, 461 |
| MspR9I | CCNGG | 3 cut(s) | 87, 291, 450 |
| MvaI | CCWGG | 3 cut(s) | 87, 291, 450 |
| MvnI | CGCG | 2 cut(s) | 6, 514 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 75, 214, 254, 263, 445, 454, 561 |
| NcoI | CCATGG | 1 cut(s) | 518 |
| NdeII | GATC | 2 cut(s) | 171, 181 |
| NlaIII | CATG | 2 cut(s) | 522, 704 |
| NlaIV | GGNNCC | 2 cut(s) | 447, 504 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 174, 186 |
| PfeI | GAWTC | 2 cut(s) | 165, 428 |
| PflFI | GACNNNGTC | 1 cut(s) | 194 |
| PkrI | GCNGC | 3 cut(s) | 8, 219, 459 |
| PleI | GAGTC | 1 cut(s) | 246 |
| PpsI | GAGTC | 1 cut(s) | 246 |
| Psp6I | CCWGG | 3 cut(s) | 85, 289, 448 |
| PspGI | CCWGG | 3 cut(s) | 85, 289, 448 |
| PspN4I | GGNNCC | 2 cut(s) | 447, 504 |
| PspPI | GGNCC | 3 cut(s) | 228, 251, 563 |
| PstNI | CAGNNNCTG | 1 cut(s) | 124 |
| PsyI | GACNNNGTC | 1 cut(s) | 194 |
| RsaI | GTAC | 1 cut(s) | 53 |
| RsaNI | GTAC | 1 cut(s) | 52 |
| RseI | CAYNNNNRTG | 1 cut(s) | 699 |
| SalI | GTCGAC | 1 cut(s) | 240 |
| SaqAI | TTAA | 1 cut(s) | 381 |
| SatI | GCNGC | 3 cut(s) | 7, 218, 458 |
| Sau3AI | GATC | 2 cut(s) | 171, 181 |
| Sau96I | GGNCC | 3 cut(s) | 228, 251, 563 |
| SchI | GAGTC | 1 cut(s) | 247 |
| ScrFI | CCNGG | 3 cut(s) | 87, 291, 450 |
| SinI | GGWCC | 2 cut(s) | 228, 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 699 |
| Sse9I | AATT | 4 cut(s) | 433, 582, 652, 686 |
| SsiI | CCGC | 9 cut(s) | 6, 9, 59, 65, 208, 266, 338, 478, 487 |
| StyD4I | CCNGG | 3 cut(s) | 85, 289, 448 |
| StyI | CCWWGG | 1 cut(s) | 518 |
| TaiI | ACGT | 2 cut(s) | 247, 355 |
| TaqI | TCGA | 2 cut(s) | 20, 241 |
| TaqII | GACCGA | 1 cut(s) | 148 |
| TasI | AATT | 4 cut(s) | 433, 582, 652, 686 |
| TauI | GCSGC | 1 cut(s) | 9 |
| TfiI | GAWTC | 2 cut(s) | 165, 428 |
| Tru1I | TTAA | 1 cut(s) | 381 |
| Tru9I | TTAA | 1 cut(s) | 381 |
| TseI | GCWGC | 2 cut(s) | 217, 457 |
| TspGWI | ACGGA | 3 cut(s) | 53, 126, 220 |
| Tth111I | GACNNNGTC | 1 cut(s) | 194 |
| VpaK11BI | GGWCC | 2 cut(s) | 228, 251 |
| XapI | RAATTY | 2 cut(s) | 582, 686 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 439, 516 |
| XmiI | GTMKAC | 1 cut(s) | 241 |