ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Acetyltransf_1 | PF00583 | 82 - 171 | 2.7e-10 | Acetyltransferase (GNAT) family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 33, 167, 425, 440 |
| AcoI | YGGCCR | 2 cut(s) | 3, 34 |
| AcyI | GRCGYC | 1 cut(s) | 291 |
| AdeI | CACNNNGTG | 1 cut(s) | 68 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 351 |
| AgsI | TTSAA | 4 cut(s) | 80, 132, 232, 275 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 338, 370 |
| AluBI | AGCT | 2 cut(s) | 194, 349 |
| AluI | AGCT | 2 cut(s) | 194, 349 |
| Alw26I | GTCTC | 1 cut(s) | 165 |
| AoxI | GGCC | 2 cut(s) | 3, 34 |
| ApeKI | GCWGC | 2 cut(s) | 285, 415 |
| AseI | ATTAAT | 1 cut(s) | 501 |
| AsuC2I | CCSGG | 1 cut(s) | 304 |
| AsuHPI | GGTGA | 3 cut(s) | 108, 132, 454 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvI | GCAGC | 2 cut(s) | 297, 402 |
| BccI | CCATC | 3 cut(s) | 151, 397, 442 |
| BceAI | ACGGC | 1 cut(s) | 298 |
| BcnI | CCSGG | 1 cut(s) | 304 |
| BcoDI | GTCTC | 1 cut(s) | 165 |
| BfaI | CTAG | 1 cut(s) | 341 |
| BisI | GCNGC | 3 cut(s) | 34, 286, 416 |
| BlsI | GCNGC | 3 cut(s) | 35, 287, 417 |
| Bme1390I | CCNGG | 1 cut(s) | 304 |
| BmrFI | CCNGG | 1 cut(s) | 304 |
| BmsI | GCATC | 1 cut(s) | 29 |
| BpuMI | CCSGG | 1 cut(s) | 304 |
| BsaHI | GRCGYC | 1 cut(s) | 291 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 108, 138 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 351 |
| Bse1I | ACTGG | 1 cut(s) | 202 |
| BseGI | GGATG | 1 cut(s) | 408 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 351 |
| BseMII | CTCAG | 1 cut(s) | 249 |
| BseNI | ACTGG | 1 cut(s) | 202 |
| BseRI | GAGGAG | 1 cut(s) | 153 |
| BseXI | GCAGC | 2 cut(s) | 297, 402 |
| BseYI | CCCAGC | 1 cut(s) | 349 |
| Bsh1285I | CGRYCG | 1 cut(s) | 249 |
| BshFI | GGCC | 2 cut(s) | 5, 36 |
| BsiEI | CGRYCG | 1 cut(s) | 249 |
| BsiSI | CCGG | 1 cut(s) | 303 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 351 |
| BsmAI | GTCTC | 1 cut(s) | 165 |
| BsnI | GGCC | 2 cut(s) | 5, 36 |
| Bsp143I | GATC | 1 cut(s) | 246 |
| BspACI | CCGC | 4 cut(s) | 33, 167, 425, 440 |
| BspANI | GGCC | 2 cut(s) | 5, 36 |
| BspCNI | CTCAG | 1 cut(s) | 250 |
| BsrI | ACTGG | 1 cut(s) | 202 |
| BssMI | GATC | 1 cut(s) | 246 |
| BssNI | GRCGYC | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 1 cut(s) | 220 |
| Bst6I | CTCTTC | 1 cut(s) | 118 |
| BstACI | GRCGYC | 1 cut(s) | 291 |
| BstC8I | GCNNGC | 1 cut(s) | 438 |
| BstDEI | CTNAG | 1 cut(s) | 258 |
| BstF5I | GGATG | 1 cut(s) | 408 |
| BstKTI | GATC | 1 cut(s) | 249 |
| BstMAI | GTCTC | 1 cut(s) | 165 |
| BstMBI | GATC | 1 cut(s) | 246 |
| BstMCI | CGRYCG | 1 cut(s) | 249 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 91, 100, 299, 437 |
| BstSCI | CCNGG | 1 cut(s) | 302 |
| BstV1I | GCAGC | 2 cut(s) | 297, 402 |
| BsuRI | GGCC | 2 cut(s) | 5, 36 |
| BtsCI | GGATG | 1 cut(s) | 408 |
| Cac8I | GCNNGC | 1 cut(s) | 438 |
| CseI | GACGC | 1 cut(s) | 299 |
| CviAII | CATG | 1 cut(s) | 391 |
| CviJI | RGCY | 7 cut(s) | 5, 36, 94, 194, 264, 344, 349 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 36, 94, 194, 264, 344, 349 |
| DdeI | CTNAG | 1 cut(s) | 258 |
| DpnI | GATC | 1 cut(s) | 248 |
| DpnII | GATC | 1 cut(s) | 246 |
| DraIII | CACNNNGTG | 1 cut(s) | 68 |
| EaeI | YGGCCR | 2 cut(s) | 3, 34 |
| Eam1104I | CTCTTC | 1 cut(s) | 118 |
| EarI | CTCTTC | 1 cut(s) | 118 |
| EciI | GGCGGA | 1 cut(s) | 156 |
| FaeI | CATG | 1 cut(s) | 394 |
| FaiI | YATR | 6 cut(s) | 39, 191, 267, 360, 392, 509 |
| FatI | CATG | 1 cut(s) | 390 |
| Fnu4HI | GCNGC | 3 cut(s) | 34, 286, 416 |
| FokI | GGATG | 1 cut(s) | 415 |
| Fsp4HI | GCNGC | 3 cut(s) | 34, 286, 416 |
| FspBI | CTAG | 1 cut(s) | 341 |
| GluI | GCNGC | 3 cut(s) | 34, 286, 416 |
| GsaI | CCCAGC | 1 cut(s) | 353 |
| HaeIII | GGCC | 2 cut(s) | 5, 36 |
| HapII | CCGG | 1 cut(s) | 303 |
| HgaI | GACGC | 1 cut(s) | 299 |
| Hin1I | GRCGYC | 1 cut(s) | 291 |
| Hin1II | CATG | 1 cut(s) | 394 |
| HpaII | CCGG | 1 cut(s) | 303 |
| HphI | GGTGA | 3 cut(s) | 108, 132, 454 |
| Hpy188III | TCNNGA | 6 cut(s) | 177, 223, 236, 244, 322, 457 |
| Hpy99I | CGWCG | 2 cut(s) | 254, 293 |
| HpyAV | CCTTC | 4 cut(s) | 138, 147, 238, 391 |
| HpyCH4III | ACNGT | 1 cut(s) | 220 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 91, 100, 299, 437 |
| HpyF3I | CTNAG | 1 cut(s) | 258 |
| Hsp92I | GRCGYC | 1 cut(s) | 291 |
| Hsp92II | CATG | 1 cut(s) | 394 |
| Kzo9I | GATC | 1 cut(s) | 246 |
| LmnI | GCTCC | 2 cut(s) | 17, 199 |
| LpnPI | CCDG | 6 cut(s) | 215, 270, 316, 335, 422, 464 |
| Lsp1109I | GCAGC | 2 cut(s) | 297, 402 |
| LweI | GCATC | 1 cut(s) | 29 |
| MaeI | CTAG | 1 cut(s) | 341 |
| MalI | GATC | 1 cut(s) | 248 |
| MboI | GATC | 1 cut(s) | 246 |
| MboII | GAAGA | 4 cut(s) | 68, 105, 406, 457 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 325, 502 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MmeI | TCCRAC | 1 cut(s) | 303 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 501 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 1 cut(s) | 303 |
| MspR9I | CCNGG | 1 cut(s) | 304 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 91, 100, 299, 437 |
| NciI | CCSGG | 1 cut(s) | 304 |
| NdeII | GATC | 1 cut(s) | 246 |
| NlaIII | CATG | 1 cut(s) | 394 |
| PkrI | GCNGC | 3 cut(s) | 35, 287, 417 |
| Ple19I | CGATCG | 1 cut(s) | 249 |
| PshBI | ATTAAT | 1 cut(s) | 501 |
| PspFI | CCCAGC | 1 cut(s) | 349 |
| PvuI | CGATCG | 1 cut(s) | 249 |
| SaqAI | TTAA | 1 cut(s) | 501 |
| SatI | GCNGC | 3 cut(s) | 34, 286, 416 |
| Sau3AI | GATC | 1 cut(s) | 246 |
| ScrFI | CCNGG | 1 cut(s) | 304 |
| SetI | ASST | 5 cut(s) | 121, 196, 230, 243, 351 |
| SfaNI | GCATC | 1 cut(s) | 29 |
| Sse9I | AATT | 2 cut(s) | 325, 502 |
| SsiI | CCGC | 4 cut(s) | 33, 167, 425, 440 |
| SspMI | CTAG | 1 cut(s) | 341 |
| StyD4I | CCNGG | 1 cut(s) | 302 |
| TaaI | ACNGT | 1 cut(s) | 220 |
| TaqI | TCGA | 4 cut(s) | 155, 237, 245, 249 |
| TasI | AATT | 2 cut(s) | 325, 502 |
| TauI | GCSGC | 1 cut(s) | 36 |
| Tru1I | TTAA | 1 cut(s) | 501 |
| Tru9I | TTAA | 1 cut(s) | 501 |
| TseI | GCWGC | 2 cut(s) | 285, 415 |
| TspDTI | ATGAA | 2 cut(s) | 42, 407 |
| TspGWI | ACGGA | 1 cut(s) | 30 |
| VspI | ATTAAT | 1 cut(s) | 501 |
| XspI | CTAG | 1 cut(s) | 341 |