ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 69, 210 |
| AclWI | GGATC | 1 cut(s) | 397 |
| AdeI | CACNNNGTG | 1 cut(s) | 487 |
| AgsI | TTSAA | 3 cut(s) | 56, 127, 176 |
| AjnI | CCWGG | 1 cut(s) | 87 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 24, 56 |
| AluBI | AGCT | 4 cut(s) | 59, 96, 197, 467 |
| AluI | AGCT | 4 cut(s) | 59, 96, 197, 467 |
| AlwI | GGATC | 1 cut(s) | 397 |
| AoxI | GGCC | 2 cut(s) | 207, 247 |
| ApeKI | GCWGC | 3 cut(s) | 281, 467, 476 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 60 |
| AspLEI | GCGC | 1 cut(s) | 113 |
| AspS9I | GGNCC | 3 cut(s) | 8, 264, 367 |
| AsuC2I | CCSGG | 1 cut(s) | 120 |
| AvaII | GGWCC | 3 cut(s) | 8, 264, 367 |
| BbvI | GCAGC | 3 cut(s) | 268, 454, 463 |
| BccI | CCATC | 3 cut(s) | 19, 345, 356 |
| BceAI | ACGGC | 1 cut(s) | 262 |
| BciT130I | CCWGG | 1 cut(s) | 89 |
| BcnI | CCSGG | 1 cut(s) | 120 |
| BfaI | CTAG | 1 cut(s) | 158 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 227 |
| BisI | GCNGC | 4 cut(s) | 210, 282, 468, 477 |
| BlsI | GCNGC | 4 cut(s) | 211, 283, 469, 478 |
| Bme1390I | CCNGG | 2 cut(s) | 89, 120 |
| Bme18I | GGWCC | 3 cut(s) | 8, 264, 367 |
| BmgT120I | GGNCC | 3 cut(s) | 8, 264, 367 |
| BmiI | GGNNCC | 2 cut(s) | 141, 368 |
| BmrFI | CCNGG | 2 cut(s) | 89, 120 |
| BmsI | GCATC | 1 cut(s) | 208 |
| BpmI | CTGGAG | 1 cut(s) | 126 |
| BpuMI | CCSGG | 1 cut(s) | 120 |
| BsaBI | GATNNNNATC | 1 cut(s) | 401 |
| BsaJI | CCNNGG | 1 cut(s) | 204 |
| Bse3DI | GCAATG | 1 cut(s) | 102 |
| Bse8I | GATNNNNATC | 1 cut(s) | 401 |
| BseBI | CCWGG | 1 cut(s) | 89 |
| BseDI | CCNNGG | 1 cut(s) | 204 |
| BseGI | GGATG | 1 cut(s) | 98 |
| BseJI | GATNNNNATC | 1 cut(s) | 401 |
| BseMI | GCAATG | 1 cut(s) | 102 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| BseXI | GCAGC | 3 cut(s) | 268, 454, 463 |
| BshFI | GGCC | 2 cut(s) | 209, 249 |
| BsiSI | CCGG | 1 cut(s) | 119 |
| BslFI | GGGAC | 2 cut(s) | 380, 458 |
| BsmFI | GGGAC | 2 cut(s) | 380, 458 |
| BsnI | GGCC | 2 cut(s) | 209, 249 |
| Bsp143I | GATC | 1 cut(s) | 402 |
| BspACI | CCGC | 2 cut(s) | 69, 210 |
| BspANI | GGCC | 2 cut(s) | 209, 249 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspLI | GGNNCC | 2 cut(s) | 141, 368 |
| BspPI | GGATC | 1 cut(s) | 397 |
| BsrDI | GCAATG | 1 cut(s) | 102 |
| BssECI | CCNNGG | 1 cut(s) | 204 |
| BssMI | GATC | 1 cut(s) | 402 |
| BssT1I | CCWWGG | 1 cut(s) | 204 |
| Bst2UI | CCWGG | 1 cut(s) | 89 |
| Bst6I | CTCTTC | 1 cut(s) | 433 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 218, 476 |
| BstC8I | GCNNGC | 1 cut(s) | 109 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstF5I | GGATG | 1 cut(s) | 98 |
| BstHHI | GCGC | 1 cut(s) | 113 |
| BstKTI | GATC | 1 cut(s) | 405 |
| BstMBI | GATC | 1 cut(s) | 402 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 77, 218, 227, 473, 476 |
| BstNI | CCWGG | 1 cut(s) | 89 |
| BstSCI | CCNGG | 2 cut(s) | 87, 118 |
| BstV1I | GCAGC | 3 cut(s) | 268, 454, 463 |
| BstX2I | RGATCY | 1 cut(s) | 402 |
| BstYI | RGATCY | 1 cut(s) | 402 |
| BsuRI | GGCC | 2 cut(s) | 209, 249 |
| BtsCI | GGATG | 1 cut(s) | 98 |
| BtsI | GCAGTG | 2 cut(s) | 113, 375 |
| BtsIMutI | CAGTG | 2 cut(s) | 113, 375 |
| Cac8I | GCNNGC | 1 cut(s) | 109 |
| CfoI | GCGC | 1 cut(s) | 113 |
| Cfr13I | GGNCC | 3 cut(s) | 8, 264, 367 |
| CviAII | CATG | 2 cut(s) | 394, 448 |
| CviJI | RGCY | 9 cut(s) | 59, 96, 140, 197, 209, 230, 249, 355, 467 |
| CviKI_1 | RGCY | 9 cut(s) | 59, 96, 140, 197, 209, 230, 249, 355, 467 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| DpnI | GATC | 1 cut(s) | 404 |
| DpnII | GATC | 1 cut(s) | 402 |
| DraIII | CACNNNGTG | 1 cut(s) | 487 |
| Eam1104I | CTCTTC | 1 cut(s) | 433 |
| EarI | CTCTTC | 1 cut(s) | 433 |
| Eco130I | CCWWGG | 1 cut(s) | 204 |
| Eco47I | GGWCC | 3 cut(s) | 8, 264, 367 |
| EcoRII | CCWGG | 1 cut(s) | 87 |
| EcoT14I | CCWWGG | 1 cut(s) | 204 |
| ErhI | CCWWGG | 1 cut(s) | 204 |
| FaeI | CATG | 2 cut(s) | 397, 451 |
| FaiI | YATR | 5 cut(s) | 39, 272, 395, 417, 449 |
| FaqI | GGGAC | 2 cut(s) | 380, 458 |
| FatI | CATG | 2 cut(s) | 393, 447 |
| FauI | CCCGC | 1 cut(s) | 76 |
| Fnu4HI | GCNGC | 4 cut(s) | 210, 282, 468, 477 |
| FokI | GGATG | 1 cut(s) | 85 |
| Fsp4HI | GCNGC | 4 cut(s) | 210, 282, 468, 477 |
| FspBI | CTAG | 1 cut(s) | 158 |
| GlaI | GCGC | 1 cut(s) | 112 |
| GluI | GCNGC | 4 cut(s) | 210, 282, 468, 477 |
| GsuI | CTGGAG | 1 cut(s) | 126 |
| HaeIII | GGCC | 2 cut(s) | 209, 249 |
| HapII | CCGG | 1 cut(s) | 119 |
| HhaI | GCGC | 1 cut(s) | 113 |
| Hin1II | CATG | 2 cut(s) | 397, 451 |
| Hin6I | GCGC | 1 cut(s) | 111 |
| HinP1I | GCGC | 1 cut(s) | 111 |
| HinfI | GANTC | 2 cut(s) | 167, 200 |
| HpaII | CCGG | 1 cut(s) | 119 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| Hpy188III | TCNNGA | 3 cut(s) | 143, 158, 302 |
| HpyAV | CCTTC | 1 cut(s) | 170 |
| HpyCH4V | TGCA | 2 cut(s) | 470, 490 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 77, 218, 227, 473, 476 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| Hsp92II | CATG | 2 cut(s) | 397, 451 |
| HspAI | GCGC | 1 cut(s) | 111 |
| Kzo9I | GATC | 1 cut(s) | 402 |
| LmnI | GCTCC | 1 cut(s) | 145 |
| LpnPI | CCDG | 8 cut(s) | 5, 74, 101, 121, 132, 156, 212, 317 |
| Lsp1109I | GCAGC | 3 cut(s) | 268, 454, 463 |
| LweI | GCATC | 1 cut(s) | 208 |
| MaeI | CTAG | 1 cut(s) | 158 |
| MalI | GATC | 1 cut(s) | 404 |
| MboI | GATC | 1 cut(s) | 402 |
| MboII | GAAGA | 3 cut(s) | 290, 377, 420 |
| MflI | RGATCY | 1 cut(s) | 402 |
| MmeI | TCCRAC | 1 cut(s) | 55 |
| MnlI | CCTC | 5 cut(s) | 45, 75, 184, 255, 422 |
| MroXI | GAANNNNTTC | 1 cut(s) | 60 |
| MseI | TTAA | 2 cut(s) | 347, 399 |
| MspI | CCGG | 1 cut(s) | 119 |
| MspR9I | CCNGG | 2 cut(s) | 89, 120 |
| MvaI | CCWGG | 1 cut(s) | 89 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 77, 218, 227, 473, 476 |
| NciI | CCSGG | 1 cut(s) | 120 |
| NdeII | GATC | 1 cut(s) | 402 |
| NlaIII | CATG | 2 cut(s) | 397, 451 |
| NlaIV | GGNNCC | 2 cut(s) | 141, 368 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 480 |
| PdmI | GAANNNNTTC | 1 cut(s) | 60 |
| PfeI | GAWTC | 2 cut(s) | 167, 200 |
| PfoI | TCCNGGA | 1 cut(s) | 87 |
| PkrI | GCNGC | 4 cut(s) | 211, 283, 469, 478 |
| Psp6I | CCWGG | 1 cut(s) | 87 |
| PspGI | CCWGG | 1 cut(s) | 87 |
| PspN4I | GGNNCC | 2 cut(s) | 141, 368 |
| PspPI | GGNCC | 3 cut(s) | 8, 264, 367 |
| PsuI | RGATCY | 1 cut(s) | 402 |
| SaqAI | TTAA | 2 cut(s) | 347, 399 |
| SatI | GCNGC | 4 cut(s) | 210, 282, 468, 477 |
| Sau3AI | GATC | 1 cut(s) | 402 |
| Sau96I | GGNCC | 3 cut(s) | 8, 264, 367 |
| ScrFI | CCNGG | 2 cut(s) | 89, 120 |
| SetI | ASST | 7 cut(s) | 24, 37, 61, 98, 195, 199, 469 |
| SfaNI | GCATC | 1 cut(s) | 208 |
| SinI | GGWCC | 3 cut(s) | 8, 264, 367 |
| SsiI | CCGC | 2 cut(s) | 69, 210 |
| SspMI | CTAG | 1 cut(s) | 158 |
| StyD4I | CCNGG | 2 cut(s) | 87, 118 |
| StyI | CCWWGG | 1 cut(s) | 204 |
| TaqI | TCGA | 1 cut(s) | 341 |
| TaqII | GACCGA | 1 cut(s) | 384 |
| TauI | GCSGC | 1 cut(s) | 212 |
| TfiI | GAWTC | 2 cut(s) | 167, 200 |
| Tru1I | TTAA | 2 cut(s) | 347, 399 |
| Tru9I | TTAA | 2 cut(s) | 347, 399 |
| TscAI | CASTG | 2 cut(s) | 120, 382 |
| TseI | GCWGC | 3 cut(s) | 281, 467, 476 |
| TspRI | CASTG | 2 cut(s) | 120, 382 |
| VpaK11BI | GGWCC | 3 cut(s) | 8, 264, 367 |
| XbaI | TCTAGA | 1 cut(s) | 157 |
| XmnI | GAANNNNTTC | 1 cut(s) | 60 |
| XspI | CTAG | 1 cut(s) | 158 |